WO2009039321A1 - Prolyl hydroxylase inhibitors - Google Patents

Prolyl hydroxylase inhibitors Download PDF

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Publication number
WO2009039321A1
WO2009039321A1 PCT/US2008/076917 US2008076917W WO2009039321A1 WO 2009039321 A1 WO2009039321 A1 WO 2009039321A1 US 2008076917 W US2008076917 W US 2008076917W WO 2009039321 A1 WO2009039321 A1 WO 2009039321A1
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alkyl
cycloalkyl
aryl
heterocycloalkyl
heteroaryl
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PCT/US2008/076917
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French (fr)
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Deping Chai
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Smithkline Beecham Corporation
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Publication of WO2009039321A1 publication Critical patent/WO2009039321A1/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D487/00Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, not provided for by groups C07D451/00 - C07D477/00
    • C07D487/02Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, not provided for by groups C07D451/00 - C07D477/00 in which the condensed system contains two hetero rings
    • C07D487/04Ortho-condensed systems

Definitions

  • This invention relates to certain bicyclic heteroaromatic N-substituted glycine derivatives that are inhibitors of HIF prolyl hydroxylases, and thus have use in treating diseases benefiting from the inhibition of these enzymes, anemia being one example.
  • Anemia occurs when there is a decrease or abnormality in red blood cells, which leads to reduced oxygen levels in the blood. Anemia occurs often in cancer patients, particularly those receiving chemotherapy. Anemia is often seen in the elderly population, patients with renal disease, and in a wide variety of conditions associated with chronic disease.
  • Epo erythropoietin
  • HIF hypoxia inducible factor
  • HIF-alpha subunits HIF-I alpha, HIF-2alpha, and HIF- 3 alpha
  • HIF-I alpha, HIF-2alpha, and HIF- 3 alpha are rapidly degraded by proteosome under normoxic conditions upon hydroxy lation of proline residues by prolyl hydroxylases (EGLNl, 2, 3).
  • Proline hydroxylation allows interaction with the von Hippel Lindau (VHL) protein, a component of an E3 ubiquitin ligase. This leads to ubiquitination of HIF-alpha and subsequent degradation.
  • VHL von Hippel Lindau
  • the compounds of this invention provide a means for inhibiting these hydroxylases, increasing Epo production, and thereby treating anemia. Ischemia, stroke, and cytoprotection may also benefit by administering these compounds.
  • this invention relates to a compound of formula (I):
  • R 1 is -NR 3 R 4 , Ci.Cioalkyl, C 2 -Ci 0 alkenyl, C 2 -Ci 0 alkynyl, C 3 -C 8 cycloalkyl, Ci.Cioalkyl- C 3 -C 8 cycloalkyl, C 5 -C 8 cycloalkenyl, Ci_Cioalkyl-C 5 -C 8 cycloalkenyl, C 3 -C 8 heterocycloalkyl, Ci_Ci O alkyl-C 3 -C 8 heterocycloalkyl, aryl, Ci_Ci O alkyl-aryl, heteroaryl or Ci_Ci 0 alkyl-heteroaryl;
  • R 2 is -NR 6 R 7 or -OR 8 ;
  • R and R are each independently selected from the group consisting of hydrogen, Ci-C 10 alkyl, C 3 -C 8 cycloalkyl, C 1 -C 10 alkyl-C 3 -C 8 cycloalkyl, C 3 -C 8 heterocycloalkyl, , C 1 -C 10 alkyl- C 3 -C 8 heterocycloalkyl, aryl, C ⁇ C ⁇ alkyl-aryl, heteroaryl, Q.Qoalkyl-heteroaryl, -CO(C 1 -C 4 alkyl), -CO(C 3 -C 6 cycloalkyl), -CO(C 3 -C 6 heterocycloalkyl), -CO(aryl), -CO(heteroaryl), and -SO 2 (C 1 -C 4 alkyl); or R 3 and R 4 taken together with the nitrogen to which they are attached form a 5- or 6- or 7- membered saturated ring optionally containing one other heteroatom which is oxygen,
  • R 6 and R 7 are each independently selected from the group consisting of hydrogen, C 1 -C 10 alkyl, C 2 _C 10 alkenyl, C 2 _C 10 alkynyl, C 3 -C 8 cycloalkyl, C 3 -C 8 heterocycloalkyl, aryl and heteroaryl; or R 6 and R 7 taken together with the nitrogen to which they are attached form a 5- or 6-membered saturated ring;
  • R 8 is H, a cation, or C ⁇ Qoalkyl which is unsubstituted or substituted with one or more substituents independently selected from the group consisting Of C 3 -C 6 cycloalkyl, heterocycloalkyl, aryl, and heteroaryl; each R 9 is independently selected from the group consisting of hydrogen, nitro, cyano, halogen, -C(O)R 5 , -C(O)OR 5 , -OR 5 , -SR 5 , -S(O)R 5 , -S(O) 2 R 5 , -NR 3 R 4 , -CONR 3 R 4 , -N(R 3 )C(O)R 5 , -N(R 3 )C(O)OR 5 , -OC(O)NR 3 R 4 , -N(R 3 )C(O)NR 3 R 4 , -P(O)(OR 5 ) 2 , -SO 2 NR 3 R 4
  • a compound of formula (I) or a salt thereof for use in treating amenia is provided.
  • An example of this therapeutic approach is that of a method for treating anemia caused by increasing the production of erythropoietin (Epo) by inhibiting HIF prolyl hydroxylases comprising administering a compound of formula (I) to a patient in need thereof, neat or admixed with a pharmaceutically acceptable excipient, in an amount sufficient to increase effectively production of Epo.
  • a pharmaceutical composition comprising a compound of formula (I) or a salt thereof and one or more of pharmaceutically acceptable carriers, diluents or excipients.
  • a compound of formula (I) or a salt thereof in the preparation of a medicament for use in the treatment of a disorder mediated by inhibiting HIF prolyl hydroxylases, such as an anemia, that can be treated by inhibiting HIF prolyl hydroxylases.
  • substituted means substituted by one or more defined groups.
  • groups may be selected from a number of alternative groups the selected groups may be the same or different.
  • an "effective amount” means that amount of a drug or pharmaceutical agent that will elicit the biological or medical response of a tissue, system, animal or human that is being sought, for instance, by a researcher or clinician.
  • therapeutically effective amount means any amount which, as compared to a corresponding subject who has not received such amount, results in improved treatment, healing, prevention, or amelioration of a disease, disorder, or side effect, or a decrease in the rate of advancement of a disease or disorder.
  • the term also includes within its scope amounts effective to enhance normal physiological function.
  • alkyl refers to a straight- or branched-chain hydrocarbon radical having the specified number of carbon atoms, so for example, as used herein, the terms “Ci-C 4 alkyl” and “Ci_Cio alkyl” refers to an alkyl group having at least 1 and up to 4 or 10 carbon atoms respectively.
  • Examples of such branched or straight-chained alkyl groups useful in the present invention include, but are not limited to, methyl, ethyl, n-propyl, isopropyl, isobutyl, n- butyl, t-butyl, n-pentyl, isopentyl, n-hexyl, n-heptyl, n-octyl, n-nonyl, and n-decyl, and branched analogs of the latter 5 normal alkanes.
  • alkenyl refers to straight or branched hydrocarbon chains containing the specified number of carbon atoms and at least 1 and up to 5 carbon-carbon double bonds. Examples include ethenyl (or ethenylene) and propenyl (or propenylene).
  • alkynyl refers to straight or branched hydrocarbon chains containing the specified number of carbon atoms and at least 1 and up to 5 carbon-carbon triple bonds. Examples include ethynyl (or ethynylene) and propynyl (or propynylene).
  • cycloalkyl refers to a non-aromatic, saturated, cyclic hydrocarbon ring containing the specified number of carbon atoms.
  • C 3 _C 8 cycloalkyl refers to a non-aromatic cyclic hydrocarbon ring having from three to eight carbon atoms.
  • Exemplary "C 3 -C 8 cycloalkyl” groups useful in the present invention include, but are not limited to, cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, cycloheptyl and cyclooctyl.
  • Cs-Cgcycloalkenyl refers to a non-aromatic monocyclic carboxycyclic ring having the specified number of carbon atoms and up to 3 carbon-carbon double bonds.
  • Cycloalkenyl includes by way of example cyclopentenyl and cyclohexenyl. Where "C3-C8 heterocycloalkyl” is used, it means a non-aromatic heterocyclic ring containing the specified number of ring atoms being, saturated or having one or more degrees of unsaturation and containing one or more heteroatom substitutions selected from O, S and/or N.
  • Such a ring may be optionally fused to one or more other "heterocyclic" ring(s) or cycloalkyl ring(s).
  • heterocyclic moieties include, but are not limited to, aziridine, thiirane, oxirane, azetidine, oxetane, thietane, tetrahydrofuran, pyran, 1,4-dioxane, 1,3-dioxane, piperidine, piperazine, 2,4-piperazinedione, pyrrolidine, imidazolidine, pyrazolidine, morpholine, thiomorpholine, tetrahydrothiopyran, tetrahydrothiophene, and the like.
  • Aryl refers to optionally substituted monocyclic and polycarbocyclic unfused or fused groups having 6 to 14 carbon atoms and having at least one aromatic ring that complies with Huckel's Rule.
  • aryl groups are phenyl, biphenyl, naphthyl, anthracenyl, phenanthrenyl and the like.
  • Heteroaryl means an optionally substituted aromatic monocyclic ring or polycarbocyclic fused ring system wherein at least one ring complies with Huckel's Rule, has the specified number of ring atoms, and that ring contains at least one heteratom selected from N, O, and/or S.
  • heteroaryl groups include furanyl, thiophenyl, pyrrolyl, imidazolyl, pyrazolyl, triazolyl, tetrazolyl, thiazolyl, oxazolyl, isoxazolyl, oxadiazolyl, oxo-pyridyl, thiadiazolyl, isothiazolyl, pyridinyl, pyridazinyl, pyrazinyl, pyrimidinyl, quinolinyl, isoquinolinyl, benzofuranyl, benzothiophenyl, indolyl, and indazolyl.
  • solvate refers to a complex of variable stoichiometry formed by a solute and a solvent. Such solvents for the purpose of the invention may not interfere with the biological activity of the solute.
  • suitable solvents include, but are not limited to, water, methanol, ethanol and acetic acid.
  • the solvent used is a pharmaceutically acceptable solvent.
  • suitable pharmaceutically acceptable solvents include, without limitation, water, ethanol and acetic acid. Most preferably the solvent used is water.
  • pharmaceutically-acceptable salts refers to salts that retain the desired biological activity of the subject compound and exhibit minimal undesired toxicological effects. These pharmaceutically-acceptable salts may be prepared in situ during the final isolation and purification of the compound, or by separately reacting the purified compound in its free acid or free base form with a suitable base or acid, respectively.
  • compounds according to Formula I may contain an acidic functional group, one acidic enough to form salts.
  • Representative salts include pharmaceutically- acceptable metal salts such as sodium, potassium, lithium, calcium, magnesium, aluminum, and zinc salts; carbonates and bicarbonates of a pharmaceutically-acceptable metal cation such as sodium, potassium, lithium, calcium, magnesium, aluminum, and zinc; pharmaceutically- acceptable organic primary, secondary, and tertiary amines including aliphatic amines, aromatic amines, aliphatic diamines, and hydroxy alkylamines such as methylamine, ethylamine, 2- hydroxyethylamine, diethylamine, triethylamine, ethylenediamine, ethanolamine, diethanolamine, and cyclohexylamine.
  • pharmaceutically- acceptable metal salts such as sodium, potassium, lithium, calcium, magnesium, aluminum, and zinc salts
  • carbonates and bicarbonates of a pharmaceutically-acceptable metal cation such as sodium, potassium, lithium, calcium, magnesium
  • compounds according to Formula (I) may contain a basic functional group and are therefore capable of forming pharmaceutically-acceptable acid addition salts by treatment with a suitable acid.
  • Suitable acids include pharmaceutically-acceptable inorganic acids amd pharmaceutically-acceptable organic acids.
  • Representative pharmaceutically- acceptable acid addition salts include hydrochloride, hydrobromide, nitrate, methylnitrate, sulfate, bisulfate, sulfamate, phosphate ⁇ acetate, hydroxyacetate, phenylacetate, propionate, butyrate, isobutyrate, valerate, maleate, hydroxymaleate, acrylate, fumarate, malate, tartrate, citrate, salicylate, />-aminosalicyclate, glycollate, lactate, heptanoate, phthalate, oxalate, succinate, benzoate, o-acetoxybenzoate, chlorobenzoate, methylbenzoate, dinitrobenzoate, hydroxybenzoate, methoxybenzoate, mandelate, tannate, formate, stearate, ascorbate, palmitate, oleate, pyruvate, pamoate, malonate, laurate, glutarate, gluta
  • R 1 is Ci_Ci O alkyl, C 2 -Ci 0 alkenyl, C 2 -Ci 0 alkynyl, C 3 -C 8 cycloalkyl, Ci_Ci O alkyl-
  • R 2 is -NR 6 R 7 or -OR 8 ;
  • R 5 is independently selected from the group consisting of hydrogen, Ci_Cioalkyl, C 2 -Ci 0 alkenyl, C 2- Ci 0 alkynyl, -CO(Ci-C 4 alkyl), -CO(aryl), -CO(heteroaryl), -SO 2 (Ci-C 4 alkyl), C 3 -C 8 cycloalkyl, C 3 -C 8 heterocycloalkyl, C 6 -Ci 4 aryl, heteroaryl, and aryl-Ci_Ci 0 alkyl;
  • R 6 and R 7 are each independently selected from the group consisting of hydrogen, Ci-Ci 0 alkyl, Q-Qo alkyl-C 3 -C 8 cycloalkyl, C 3 -C 8 heterocycloalkyl, aryl, -CO(C r C 4 alkyl), or C 3 -C 8 cycloalkyl-Q-Cio alkyl; or R 6 and
  • R 8 is H or a cation, or Ci_Cioalkyl which is unsubstituted or substituted with one or more substituents independently selected from the group consisting of C 3 -C 6 cycloalkyl, heterocycloalkyl, aryl, and heteroaryl; and each R 9 is independently selected from the group consisting of hydrogen, -NR 3 R 4 , Ci-Ci 0 alkyl, C 3 -C 6 cycloalkyl, Ci-Ci 0 alkyl-C 3 -C 6 cycloalkyl, C 3 -C 6 heterocycloalkyl, Ci-Ci 0 alkyl-C 3 -C 6 heterocycloalkyl, aryl, Ci-Ci 0 alkylaryl, and heteroaryl.
  • Compounds of further interest are those wherein:
  • R 1 is Ci.Cioalkyl, aryl, C 3 -C 8 cycloalkyl, Ci_Ci ⁇ alkyl-C 3 -C 8 cycloalkyl, or Ci_Ci O alkylaryl;
  • R 2 is -NR 6 R 7 or -OR 8 ;
  • R 3 and R 4 are each independently selected from the group consisting of hydrogen, Ci-C 6 alkyl, C 3 -C 6 cycloalkyl, Ci-C 6 alkyl-C 3 -C 6 cycloalkyl, C 3 -C 6 heterocycloalkyl, , Ci-C 6 alkyl- C 3 -C 6 heterocycloalkyl, aryl, Ci_C 6 alkyl-aryl, heteroaryl, Ci_C 6 alkyl-heteroaryl, -CO(Ci-C 4 alkyl), -CO(C 3 -C 6 cycloalkyl), -CO(C 3 -C 6 heterocycloalkyl), -CO(aryl), -CO(heteroaryl), -CONR 6 R 7 , and -SO 2 (Ci-C 4 alkyl); or R 3 and R 4 taken together with the nitrogen to which they are attached form a 5- or 6-membered saturated ring optionally containing one other heteroatom which is
  • R 6 and R 7 are each independently selected from the group consisting of hydrogen, Ci-Ci 0 alkyl, Ci-Ci 0 alkyl-C 3 -C 8 cycloalkyl, C 3 -C 8 heterocycloalkyl, aryl, -CO(Ci-C 4 alkyl), and C 3 -C 8 cycloalkyl-Ci-Cio alkyl; or R 6 and R 7 taken together with the nitrogen to which they are attached form a 5- or 6-membered saturated ring; and
  • R 8 is H, a cation, or Ci_Ci O alkyl which is unsubstituted or substituted with one or more substituents independently selected from the group consisting Of C 3 -C 6 cycloalkyl, heterocycloalkyl, aryl, or heteroaryl.
  • substituents independently selected from the group consisting Of C 3 -C 6 cycloalkyl, heterocycloalkyl, aryl, or heteroaryl.
  • R 1 is Ci.Cioalkyl, C 3 -C 8 cycloalkyl, Ci_Ci ⁇ alkyl-C 3 -C 8 cycloalkyl, or Ci_Ci O alkylaryl;
  • R 3 and R 4 are each independently selected from the group consisting of hydrogen, Ci-C 6 alkyl, C 3 -C 6 cycloalkyl, Ci-C 6 alkyl-C 3 -C 6 cycloalkyl, C 3 -C 6 heterocycloalkyl, , Ci-C 6 alkyl- C 3 -C 6 heterocycloalkyl, aryl, d_C 6 alkyl-aryl, heteroaryl, Ci_C 6 alkyl-heteroaryl, -CO(Ci-C 4 alkyl), -CO(C 3 -C 6 cycloalkyl), -CO(C 3 -C 6 heterocycloalkyl), -CO(aryl), -CO(heteroaryl),
  • R 6 and R 7 are each independently selected from the group consisting of hydrogen, Ci-Ci 0 alkyl, C r Ci 0 alkyl-C 3 -C 8 cycloalkyl, C 3 -C 8 heterocycloalkyl, aryl, -CO(C r C 4 alkyl), and C 3 -C 8 cycloalkyl-Q-Cio alkyl; or R 6 and R 7 taken together with the nitrogen to which they are attached form a 5- or 6-membered saturated ring; R 8 is H or a cation; and each R 9 is independently selected from the group consisting of hydrogen, -NR 6 R 7 , Ci-Cio alkyl, C 3 -C 6 cycloalkyl, Ci-Ci 0 alkyl-C 3 -C 6 cycloalkyl, C 3 -C 6 heterocycloalkyl, Ci-Ci 0 alkyl-C 3 -C 6 heterocycloalkyl, aryl, Ci-C
  • R 1 and R 2 are the same as defined above for formula (I), the process comprising treating a compound of formula A: wherein R 1 is the same as for that group in formula (I) and R' is a ester- forming group, with glycine sodium salt or glycine and an appropriate base, such as l,8-diazabicyclo[5.4.0]undec-7- ene, sodium ethoxide or sodium hydride, in an appropriate solvent, such as ethanol or 1 ,4-dioxane, under either conventional thermal conditions or by microwave irradiation, to form a compound of formula (I) where R 2 is -OH.
  • the compounds of formula (I) may be prepared in crystalline or non-crystalline form, and, if crystalline, may optionally be solvated, e.g. as the hydrate.
  • This invention includes within its scope stoichiometric solvates (e.g. hydrates) as well as compounds containing variable amounts of solvent (e.g. water).
  • Certain of the compounds described herein may contain one or more chiral atoms, or may otherwise be capable of existing as two enantiomers.
  • the compounds claimed below include mixtures of enantiomers as well as purified enantiomers or enantiomerically enriched mixtures.
  • Also included within the scope of the invention are the individual isomers of the compounds represented by formula (I), or claimed below, as well as any wholly or partially equilibrated mixtures thereof.
  • the present invention also covers the individual isomers of the claimed compounds as mixtures with isomers thereof in which one or more chiral centers are inverted. Also, it is understood that any tautomers and mixtures of tautomers of the claimed compounds are included within the scope of the compounds of formula (I) as disclosed herein above or claimed herein below.
  • compositions which includes a compound of formula (I) and salts, solvates and the like, and one or more pharmaceutically acceptable carriers, diluents, or excipients.
  • the compounds of formula (I) and salts, solvates, etc, are as described above.
  • the carrier(s), diluent(s) or excipient(s) must be acceptable in the sense of being compatible with the other ingredients of the formulation and not deleterious to the recipient thereof.
  • a process for the preparation of a pharmaceutical formulation including admixing a compound of the formula (I), or salts, solvates etc, with one or more pharmaceutically acceptable carriers, diluents or excipients.
  • pro-drugs examples include Drugs of Today, Volume 19, Number 9, 1983, pp 499 - 538 and in Topics in Chemistry, Chapter 31, pp 306 - 316 and in "Design of Prodrugs" by H. Bundgaard, Elsevier, 1985, Chapter 1 (the disclosures in which documents are incorporated herein by reference). It will further be appreciated by those skilled in the art, that certain moieties, known to those skilled in the art as “pro-moieties”, for example as described by H. Bundgaard in “Design of Prodrugs” (the disclosure in which document is incorporated herein by reference) may be placed on appropriate functionalities when such functionalities are present within compounds of the invention.
  • Preferred prodrugs for compounds of the invention include : esters, carbonate esters, hemi-esters, phosphate esters, nitro esters, sulfate esters, sulfoxides, amides, carbamates, azo-compounds, phosphamides, glycosides, ethers, acetals and ketals.
  • compositions may be presented in unit dose forms containing a predetermined amount of active ingredient per unit dose.
  • a unit may contain, for example, 0.5 mg to 1 g, preferably 1 mg to 700 mg, more preferably 5 mg to 100 mg of a compound of the formula (I), depending on the condition being treated, the route of administration and the age, weight and condition of the patient, or pharmaceutical compositions may be presented in unit dose forms containing a predetermined amount of active ingredient per unit dose.
  • Preferred unit dosage compositions are those containing a daily dose or sub-dose, as herein above recited, or an appropriate fraction thereof, of an active ingredient.
  • such pharmaceutical compositions may be prepared by any of the methods well known in the pharmacy art.
  • compositions may be adapted for administration by any appropriate route, for example by the oral (including buccal or sublingual), rectal, nasal, topical (including buccal, sublingual or transdermal), vaginal or parenteral (including subcutaneous, intramuscular, intravenous or intradermal) route.
  • Such compositions may be prepared by any method known in the art of pharmacy, for example by bringing into association a compound of formal (I) with the carrier(s) or excipient(s).
  • compositions adapted for oral administration may be presented as discrete units such as capsules or tablets; powders or granules; solutions or suspensions in aqueous or nonaqueous liquids; edible foams or whips; or oil-in-water liquid emulsions or water-in-oil liquid emulsions.
  • Capsules are made by preparing a powder mixture, as described above, and filling formed gelatin sheaths.
  • Glidants and lubricants such as colloidal silica, talc, magnesium stearate, calcium stearate or solid polyethylene glycol can be added to the powder mixture before the filling operation.
  • a disintegrating or solubilizing agent such as agar-agar, calcium carbonate or sodium carbonate can also be added to improve the availability of the medicament when the capsule is ingested.
  • suitable binders include starch, gelatin, natural sugars such as glucose or beta-lactose, corn sweeteners, natural and synthetic gums such as acacia, tragacanth or sodium alginate, carboxymethylcellulose, polyethylene glycol, waxes and the like.
  • Lubricants used in these dosage forms include sodium oleate, sodium stearate, magnesium stearate, sodium benzoate, sodium acetate, sodium chloride and the like.
  • Disintegrators include, without limitation, starch, methyl cellulose, agar, bentonite, xanthan gum and the like.
  • Tablets are formulated, for example, by preparing a powder mixture, granulating or slugging, adding a lubricant and disintegrant and pressing into tablets.
  • a powder mixture is prepared by mixing the compound, suitably comminuted, with a diluent or base as described above, and optionally, with a binder such as carboxymethylcellulose, an aliginate, gelatin, or polyvinyl pyrrolidone, a solution retardant such as paraffin, a resorption accelerator such as a quaternary salt and/or an absorption agent such as bentonite, kaolin or dicalcium phosphate.
  • a binder such as carboxymethylcellulose, an aliginate, gelatin, or polyvinyl pyrrolidone
  • a solution retardant such as paraffin
  • a resorption accelerator such as a quaternary salt
  • an absorption agent such as bentonite, kaolin or dicalcium phosphate.
  • the powder mixture can be granulated by tablet forming dies by means of the addition of stearic acid, a stearate salt, talc or mineral oil.
  • the lubricated mixture is then compressed into tablets.
  • the compounds of the present invention can also be combined with a free flowing inert carrier and compressed into tablets directly without going through the granulating or slugging steps.
  • a clear or opaque protective coating consisting of a sealing coat of shellac, a coating of sugar or polymeric material and a polish coating of wax can be provided. Dyestuffs can be added to these coatings to distinguish different unit dosages.
  • Oral fluids such as solution, syrups and elixirs can be prepared in dosage unit form so that a given quantity contains a predetermined amount of a compound of formula (I).
  • Syrups can be prepared by dissolving the compound in a suitably flavored aqueous solution, while elixirs are prepared through the use of a non-toxic alcoholic vehicle.
  • Suspensions can be formulated by dispersing the compound in a non-toxic vehicle.
  • Solubilizers and emulsifiers such as ethoxylated isostearyl alcohols and polyoxy ethylene sorbitol ethers, preservatives, flavor additive such as peppermint oil or natural sweeteners or saccharin or other artificial sweeteners, and the like can also be added.
  • dosage unit pharmaceutical compositions for oral administration can be microencapsulated.
  • the formulation can also be prepared to prolong or sustain the release as for example by coating or embedding particulate material in polymers, wax or the like.
  • compositions adapted for rectal administration may be presented as suppositories or as enemas.
  • compositions adapted for vaginal administration may be presented as pessaries, tampons, creams, gels, pastes, foams or spray formulations.
  • Pharmaceutical formulations adapted for parenteral administration include aqueous and non-aqueous sterile injection solutions which may contain anti-oxidants, buffers, bacteriostats and solutes which render the composition isotonic with the blood of the intended recipient; and aqueous and non-aqueous sterile suspensions which may include suspending agents and thickening agents.
  • compositions may be presented in unit-dose or multi-dose containers, for example sealed ampoules and vials, and may be stored in a freeze-dried (lyophilized) condition requiring only the addition of the sterile liquid carrier, for example water for injections, immediately prior to use.
  • sterile liquid carrier for example water for injections, immediately prior to use.
  • Extemporaneous injection solutions and suspensions may be prepared from sterile powders, granules and tablets.
  • compositions may include other agents conventional in the art having regard to the type of formulation in question, for example those suitable for oral administration may include flavouring agents.
  • a therapeutically effective amount of a compound of the present invention will depend upon a number of factors including, for example, the age and weight of the intended recipient, the precise condition requiring treatment and its severity, the nature of the formulation, and the route of administration, and will ultimately be at the discretion of the attendant prescribing the medication.
  • an effective amount of a compound of formula (I) for the treatment of anemia will generally be in the range of 0.1 to 100 mg/kg body weight of recipient per day and more usually in the range of 1 to 10 mg/kg body weight per day.
  • the actual amount per day would usually be from 70 to 700 mg and this amount may be given in a single dose per day or more usually in a number (such as two, three, four, five or six) of sub-doses per day such that the total daily dose is the same.
  • An effective amount of a salt or solvate, etc. may be determined as a proportion of the effective amount of the compound of formula (I) per se. It is envisaged that similar dosages would be appropriate for treatment of the other conditions referred to above. Definitions:
  • the compounds of this invention may be made by a variety of methods, including standard chemistry. Any previously defined variable will continue to have the previously defined meaning unless otherwise indicated. Illustrative general synthetic methods are set out below and then specific compounds of the invention as prepared are given in the examples.
  • Compounds of general formula (I) may be prepared by methods known in the art of organic synthesis as set forth in part by the following synthesis schemes. In all of the schemes described below, it is well understood that protecting groups for sensitive or reactive groups are employed where necessary in accordance with general principles of chemistry. Protecting groups are manipulated according to standard methods of organic synthesis (T. W. Green and P. G. M. Wuts (1991) Protecting Groups in Organic Synthesis. John Wiley & Sons).
  • the compounds described herein may be made from commercially available starting materials or synthesized using known organic, inorganic and/or enzymatic processes.
  • erythropoietin is a HIF-2 ⁇ target gene in Hep3B and Kelly cells" FASEB J, 2004, 18, 1462-1464.
  • HIF2a-C0DD For the expression of HIF2a-C0DD see: a) P. Jaakkola, D. R. Mole, Y.-M. Tian, M. I. Wilson, J. Gielbert, S. J. Gaskell, A. von Kriegsheim, H. F. Heberete, M. Mukherji, C. J. Schofield, P. H. Maxwell, C. W. Pugh, P, J. Ratcliffe “Targeting of HIF- ⁇ to the von Hippel-Lindau Ubiquitylation Complex by O 2 - Regulated Prolyl Hydroxylation" Science, 2001, 292, 468-472. b) M. Ivan, K. Kondo, H. Yang, W. Kim, J. Valiando, M. Ohh, A. Salic, J. M. Asara, W. S.
  • His-MBP-EGLN3 (6HisMBPAttBlEGLN3(l-239)) was expressed in E. CoIi and purified from an amylase affinity column. Biotin-VBC [6HisSumoCysVHL(2-213), 6HisSumoElonginB(l-l 18), and 6HisSumoElonginC(l-l 12)] and His-GBl-HIF2 ⁇ -CODD (6HisGBltevHIF2A(467-572)) were expressed from .E 1 . CoIi. Method:
  • Cy5-labelled HIF2 ⁇ CODD, and a biotin-labeled VBC complex were used to determine EGLN3 inhibition.
  • EGLN3 hydroxylation of the Cy5CODD substrate results in its recognition by the biotin-VBC.
  • Addition of a Europium/streptavidin (Eu/SA) chelate results in proximity of Eu to Cy5 in the product, allowing for detection by energy transfer.
  • a ratio of Cy5 to Eu emission (LANCE Ratio) is the ultimate readout, as this normalized parameter has significantly less variance than the Cy5 emission alone.
  • the IC 5 O for exemplified compounds in the EGLN3 assay ranged from approximately 1 - 100 nanomolar. This range represents the data accumulated as of the time of the filing of this initial application. Later testing may show variations in IC 5 O data due to variations in reagents, conditions and variations in the method(s) used from those given herein above. So this range is to be viewed as illustrative, and not a absolute set of numbers.
  • Hep3B cells obtained from the American Type Culture Collection are seeded at 2xlO ⁇ 4 cells/well in Dulbecco's Modified Eagle Medium (DMEM) + 10% FBS in 96-well plates. Cells are incubated at 37degC/5% CO2/90% humidity (standard cell culture incubation conditions). After overnight adherence, medium is removed and replaced with DMEM without serum containing test compound or DMSO negative control. Following 48 hours incubation, cell culture medium is collected and assayed by ELISA to quantitate Epo protein.
  • DMEM Dulbecco's Modified Eagle Medium
  • the EC 50 for exemplar compounds in the Hep3B ELISA assay ranged from approximately 1 - 20 micromolar using the reagents and under the conditions outlined herein above. This range represents the data accumulated as of the time of the filing of this initial application. Later testing may show variations in EC 5 O data due to variations in reagents, conditions and variations in the method(s) used from those given herein above. So this range is to be viewed as illustrative, and not a absolute set of numbers. These compound are believed to be useful in therapy as defined above and to not have unacceptable or untoward effects when used in compliance with a permited therapeutic regime.

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Abstract

The invention described herein relates to certain bicyclic heteroaromatic N-substituted glycine derivatives of formula (I) which are antagonists of HIF prolyl hydroxylases and are useful for treating diseases benefiting from the inhibition of these enzymes, anemia being one example.

Description

Prolyl Hydroxylase Inhibitors
FIELD OF THE INVENTION
This invention relates to certain bicyclic heteroaromatic N-substituted glycine derivatives that are inhibitors of HIF prolyl hydroxylases, and thus have use in treating diseases benefiting from the inhibition of these enzymes, anemia being one example.
BACKGROUND OF THE INVENTION
Anemia occurs when there is a decrease or abnormality in red blood cells, which leads to reduced oxygen levels in the blood. Anemia occurs often in cancer patients, particularly those receiving chemotherapy. Anemia is often seen in the elderly population, patients with renal disease, and in a wide variety of conditions associated with chronic disease.
Frequently, the cause of anemia is reduced erythropoietin (Epo) production resulting in prevention of erythropoiesis (maturation of red blood cells). Epo production can be increased by inhibition of prolyl hydroxylases that regulate hypoxia inducible factor (HIF).
One strategy to increase erythropoietin (Epo) production is to stabilize and thus increase the transcriptional activity of the HIF. HIF-alpha subunits (HIF-I alpha, HIF-2alpha, and HIF- 3 alpha) are rapidly degraded by proteosome under normoxic conditions upon hydroxy lation of proline residues by prolyl hydroxylases (EGLNl, 2, 3). Proline hydroxylation allows interaction with the von Hippel Lindau (VHL) protein, a component of an E3 ubiquitin ligase. This leads to ubiquitination of HIF-alpha and subsequent degradation. Under hypoxic conditions, the inhibitory activity of the prolyl hydroxylases is suppressed, HIF-alpha subunits are therefore stabilized, and HIF -responsive genes, including Epo, are transcribed. Thus, inhibition of prolyl hydroxylases results in increased levels of HIF-alpha and thus increased Epo production. The compounds of this invention provide a means for inhibiting these hydroxylases, increasing Epo production, and thereby treating anemia. Ischemia, stroke, and cytoprotection may also benefit by administering these compounds.
SUMMARY OF THE INVENTION In the first instance, this invention relates to a compound of formula (I):
Figure imgf000002_0001
wherein:
R1 is -NR3R4, Ci.Cioalkyl, C2-Ci0alkenyl, C2-Ci0alkynyl, C3-C8cycloalkyl, Ci.Cioalkyl- C3-C8cycloalkyl, C5-C8cycloalkenyl, Ci_Cioalkyl-C5-C8 cycloalkenyl, C3-C8 heterocycloalkyl, Ci_CiOalkyl-C3-C8 heterocycloalkyl, aryl, Ci_CiOalkyl-aryl, heteroaryl or Ci_Ci0alkyl-heteroaryl;
R2 is -NR6R7 or -OR8;
R and R are each independently selected from the group consisting of hydrogen, Ci-C 10 alkyl, C3-C8cycloalkyl, C1-C10 alkyl-C3-C8cycloalkyl, C3-C8heterocycloalkyl, , C1-C10 alkyl- C3-C8heterocycloalkyl, aryl, C^C^alkyl-aryl, heteroaryl, Q.Qoalkyl-heteroaryl, -CO(C1-C4 alkyl), -CO(C3-C6 cycloalkyl), -CO(C3-C6 heterocycloalkyl), -CO(aryl), -CO(heteroaryl), and -SO2(C1-C4 alkyl); or R3 and R4 taken together with the nitrogen to which they are attached form a 5- or 6- or 7- membered saturated ring optionally containing one other heteroatom which is oxygen, nitrogen or sulphur; each R5 is independently selected from the group consisting of hydrogen, C^Qoalkyl, C2_C10alkenyl, C2_C10alkynyl, -CO(C1-C4 alkyl), -CO(aryl), -CO(heteroaryl), -CO(C3-C6 cycloalkyl), -CO(C3-C6 heterocycloalkyl), -SO2(C1-C4 alkyl), C3-C8 cycloalkyl,
C3-C8heterocycloalkyl, C6-C14 aryl, C^Qoalkyl-aryl, heteroaryl, and CuQoalkyl-heteroaryl;
R6 and R7 are each independently selected from the group consisting of hydrogen, C1-C10 alkyl, C2_C10 alkenyl, C2_C10 alkynyl, C3-C8 cycloalkyl, C3-C8 heterocycloalkyl, aryl and heteroaryl; or R6 and R7 taken together with the nitrogen to which they are attached form a 5- or 6-membered saturated ring;
R8 is H, a cation, or C^Qoalkyl which is unsubstituted or substituted with one or more substituents independently selected from the group consisting Of C3-C6 cycloalkyl, heterocycloalkyl, aryl, and heteroaryl; each R9 is independently selected from the group consisting of hydrogen, nitro, cyano, halogen, -C(O)R5, -C(O)OR5, -OR5, -SR5, -S(O)R5, -S(O)2R5, -NR3R4, -CONR3R4, -N(R3)C(O)R5, -N(R3)C(O)OR5, -OC(O)NR3R4, -N(R3)C(O)NR3R4, -P(O)(OR5)2, -SO2NR3R4, -N(R3)SO2R5, C1-C10 alkyl, C1-C10 alkenyl, C1-C10 alkynyl, C3-C6 cycloalkyl, C3-C6 heterocycloalkyl, aryl and heteroaryl; any carbon or heteroatom of R1, R2, R3, R4, R5, R6, R7, R8, or R9 is unsubstituted or, where possible, is substituted with one or more substituents independently selected from the group consisting Of C1-C6 alkyl, aryl, heteroaryl, halogen, -OR5, -NR3R4, cyano, nitro, -C(O)R5, - C(O)OR5, -SR5, -S(O)R5, -S(O)2R5, -NR3R4, -CONR3R4, -N(R3)C(O)R5, -N(R3)C(O)OR5, -OC(O)NR3R4, -N(R3)C(O)NR3R4, -SO2NR3R4, -N(R3)SO2R5, C1-C10 alkenyl, C1-C10 alkynyl, C3-C6 cycloalkyl, C3-C6 heterocycloalkyl, aryl, and heteroaryl, wherein R3, R4, and R5 are the same as defined above; or a pharmaceutically acceptable salt thereof. In a second aspect of the present invention there is provided a compound of formula (I) or a salt thereof for use in treating amenia. An example of this therapeutic approach is that of a method for treating anemia caused by increasing the production of erythropoietin (Epo) by inhibiting HIF prolyl hydroxylases comprising administering a compound of formula (I) to a patient in need thereof, neat or admixed with a pharmaceutically acceptable excipient, in an amount sufficient to increase effectively production of Epo.
In a third aspect of the present invention there is provided a pharmaceutical composition comprising a compound of formula (I) or a salt thereof and one or more of pharmaceutically acceptable carriers, diluents or excipients. In a fourth aspect there is provided the use of a compound of formula (I) or a salt thereof in the preparation of a medicament for use in the treatment of a disorder mediated by inhibiting HIF prolyl hydroxylases, such as an anemia, that can be treated by inhibiting HIF prolyl hydroxylases.
DETAILED DESCRIPTION OF THE INVENTION For the avoidance of doubt, unless otherwise indicated, the term "substituted" means substituted by one or more defined groups. In the case where groups may be selected from a number of alternative groups the selected groups may be the same or different.
The term "independently" means that where more than one substituent is selected from a number of possible substituents, those substituents may be the same or different. An "effective amount" means that amount of a drug or pharmaceutical agent that will elicit the biological or medical response of a tissue, system, animal or human that is being sought, for instance, by a researcher or clinician. Furthermore, the term "therapeutically effective amount" means any amount which, as compared to a corresponding subject who has not received such amount, results in improved treatment, healing, prevention, or amelioration of a disease, disorder, or side effect, or a decrease in the rate of advancement of a disease or disorder. The term also includes within its scope amounts effective to enhance normal physiological function.
As used herein the term "alkyl" refers to a straight- or branched-chain hydrocarbon radical having the specified number of carbon atoms, so for example, as used herein, the terms "Ci-C4 alkyl" and "Ci_Cio alkyl" refers to an alkyl group having at least 1 and up to 4 or 10 carbon atoms respectively. Examples of such branched or straight-chained alkyl groups useful in the present invention include, but are not limited to, methyl, ethyl, n-propyl, isopropyl, isobutyl, n- butyl, t-butyl, n-pentyl, isopentyl, n-hexyl, n-heptyl, n-octyl, n-nonyl, and n-decyl, and branched analogs of the latter 5 normal alkanes.
When the term "alkenyl" (or "alkenylene") is used it refers to straight or branched hydrocarbon chains containing the specified number of carbon atoms and at least 1 and up to 5 carbon-carbon double bonds. Examples include ethenyl (or ethenylene) and propenyl (or propenylene).
When the term "alkynyl" (or "alkynylene") is used it refers to straight or branched hydrocarbon chains containing the specified number of carbon atoms and at least 1 and up to 5 carbon-carbon triple bonds. Examples include ethynyl (or ethynylene) and propynyl (or propynylene).
When "cycloalkyl" is used it refers to a non-aromatic, saturated, cyclic hydrocarbon ring containing the specified number of carbon atoms. So, for example, the term "C3_C8 cycloalkyl" refers to a non-aromatic cyclic hydrocarbon ring having from three to eight carbon atoms. Exemplary "C3-C8 cycloalkyl" groups useful in the present invention include, but are not limited to, cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, cycloheptyl and cyclooctyl.
The term " Cs-Cgcycloalkenyl" refers to a non-aromatic monocyclic carboxycyclic ring having the specified number of carbon atoms and up to 3 carbon-carbon double bonds.
"Cycloalkenyl" includes by way of example cyclopentenyl and cyclohexenyl. Where "C3-C8 heterocycloalkyl" is used, it means a non-aromatic heterocyclic ring containing the specified number of ring atoms being, saturated or having one or more degrees of unsaturation and containing one or more heteroatom substitutions selected from O, S and/or N.
Such a ring may be optionally fused to one or more other "heterocyclic" ring(s) or cycloalkyl ring(s). Examples of "heterocyclic" moieties include, but are not limited to, aziridine, thiirane, oxirane, azetidine, oxetane, thietane, tetrahydrofuran, pyran, 1,4-dioxane, 1,3-dioxane, piperidine, piperazine, 2,4-piperazinedione, pyrrolidine, imidazolidine, pyrazolidine, morpholine, thiomorpholine, tetrahydrothiopyran, tetrahydrothiophene, and the like.
"Aryl" refers to optionally substituted monocyclic and polycarbocyclic unfused or fused groups having 6 to 14 carbon atoms and having at least one aromatic ring that complies with Huckel's Rule. Examples of aryl groups are phenyl, biphenyl, naphthyl, anthracenyl, phenanthrenyl and the like.
"Heteroaryl" means an optionally substituted aromatic monocyclic ring or polycarbocyclic fused ring system wherein at least one ring complies with Huckel's Rule, has the specified number of ring atoms, and that ring contains at least one heteratom selected from N, O, and/or S. Examples of "heteroaryl" groups include furanyl, thiophenyl, pyrrolyl, imidazolyl, pyrazolyl, triazolyl, tetrazolyl, thiazolyl, oxazolyl, isoxazolyl, oxadiazolyl, oxo-pyridyl, thiadiazolyl, isothiazolyl, pyridinyl, pyridazinyl, pyrazinyl, pyrimidinyl, quinolinyl, isoquinolinyl, benzofuranyl, benzothiophenyl, indolyl, and indazolyl.
The term "optionally" means that the subsequently described event(s) may or may not occur, and includes both event(s), which occur, and events that do not occur. The term "solvate" refers to a complex of variable stoichiometry formed by a solute and a solvent. Such solvents for the purpose of the invention may not interfere with the biological activity of the solute. Examples of suitable solvents include, but are not limited to, water, methanol, ethanol and acetic acid. Preferably the solvent used is a pharmaceutically acceptable solvent. Examples of suitable pharmaceutically acceptable solvents include, without limitation, water, ethanol and acetic acid. Most preferably the solvent used is water.
Herein, the term "pharmaceutically-acceptable salts" refers to salts that retain the desired biological activity of the subject compound and exhibit minimal undesired toxicological effects. These pharmaceutically-acceptable salts may be prepared in situ during the final isolation and purification of the compound, or by separately reacting the purified compound in its free acid or free base form with a suitable base or acid, respectively.
In certain embodiments, compounds according to Formula I may contain an acidic functional group, one acidic enough to form salts. Representative salts include pharmaceutically- acceptable metal salts such as sodium, potassium, lithium, calcium, magnesium, aluminum, and zinc salts; carbonates and bicarbonates of a pharmaceutically-acceptable metal cation such as sodium, potassium, lithium, calcium, magnesium, aluminum, and zinc; pharmaceutically- acceptable organic primary, secondary, and tertiary amines including aliphatic amines, aromatic amines, aliphatic diamines, and hydroxy alkylamines such as methylamine, ethylamine, 2- hydroxyethylamine, diethylamine, triethylamine, ethylenediamine, ethanolamine, diethanolamine, and cyclohexylamine.
In certain embodiments, compounds according to Formula (I) may contain a basic functional group and are therefore capable of forming pharmaceutically-acceptable acid addition salts by treatment with a suitable acid. Suitable acids include pharmaceutically-acceptable inorganic acids amd pharmaceutically-acceptable organic acids. Representative pharmaceutically- acceptable acid addition salts include hydrochloride, hydrobromide, nitrate, methylnitrate, sulfate, bisulfate, sulfamate, phosphate^ acetate, hydroxyacetate, phenylacetate, propionate, butyrate, isobutyrate, valerate, maleate, hydroxymaleate, acrylate, fumarate, malate, tartrate, citrate, salicylate, />-aminosalicyclate, glycollate, lactate, heptanoate, phthalate, oxalate, succinate, benzoate, o-acetoxybenzoate, chlorobenzoate, methylbenzoate, dinitrobenzoate, hydroxybenzoate, methoxybenzoate, mandelate, tannate, formate, stearate, ascorbate, palmitate, oleate, pyruvate, pamoate, malonate, laurate, glutarate, glutamate, estolate, methanesulfonate (mesylate), ethanesulfonate (esylate), 2-hydroxyethanesulfonate, benzenesulfonate (besylate),/>- aminobenzenesulfonate,/>-toluenesulfonate (tosylate), and napthalene-2-sulfonate. Compounds of particular interest include those wherein: R1 is Ci_CiOalkyl, C2-Ci0alkenyl, C2-Ci0alkynyl, C3-C8cycloalkyl, Ci_CiOalkyl-
C3-Cgcycloalkyl, or C5-Cgcycloalkenyl, Ci-Cioalkyl-Cs-Cgcycloalkenyl, aryl, or Ci_Cioalkylaryl; R2 is -NR6R7 or -OR8;
R5 is independently selected from the group consisting of hydrogen, Ci_Cioalkyl, C2-Ci0alkenyl, C2-Ci0alkynyl, -CO(Ci-C4 alkyl), -CO(aryl), -CO(heteroaryl), -SO2(Ci-C4 alkyl), C3-C8 cycloalkyl, C3-C8heterocycloalkyl, C6-Ci4 aryl, heteroaryl, and aryl-Ci_Ci0 alkyl; R6 and R7 are each independently selected from the group consisting of hydrogen, Ci-Ci0 alkyl, Q-Qo alkyl-C3-C8cycloalkyl, C3-C8heterocycloalkyl, aryl, -CO(CrC4 alkyl), or C3-C8 cycloalkyl-Q-Cio alkyl; or R6 and R7 taken together with the nitrogen to which they are attached form a 5- or 6-membered saturated ring;
R8 is H or a cation, or Ci_Cioalkyl which is unsubstituted or substituted with one or more substituents independently selected from the group consisting of C3-C6 cycloalkyl, heterocycloalkyl, aryl, and heteroaryl; and each R9 is independently selected from the group consisting of hydrogen, -NR3R4, Ci-Ci0 alkyl, C3-C6 cycloalkyl, Ci-Ci0 alkyl-C3-C6 cycloalkyl, C3-C6 heterocycloalkyl, Ci-Ci0 alkyl-C3-C6 heterocycloalkyl, aryl, Ci-Ci0 alkylaryl, and heteroaryl. Compounds of further interest are those wherein:
R1 is Ci.Cioalkyl, aryl, C3-C8cycloalkyl, Ci_Ciθalkyl-C3-C8cycloalkyl, or Ci_CiOalkylaryl; R2 is -NR6R7 or -OR8;
R3 and R4 are each independently selected from the group consisting of hydrogen, Ci-C6 alkyl, C3-C6cycloalkyl, Ci-C6 alkyl-C3-C6cycloalkyl, C3-C6heterocycloalkyl, , Ci-C6 alkyl- C3-C6heterocycloalkyl, aryl, Ci_C6alkyl-aryl, heteroaryl, Ci_C6alkyl-heteroaryl, -CO(Ci-C4 alkyl), -CO(C3-C6 cycloalkyl), -CO(C3-C6 heterocycloalkyl), -CO(aryl), -CO(heteroaryl), -CONR6R7, and -SO2(Ci-C4 alkyl); or R3 and R4 taken together with the nitrogen to which they are attached form a 5- or 6-membered saturated ring optionally containing one other heteroatom which is oxygen, nitrogen or sulphur; R5 is independently selected from the group consisting of hydrogen, Ci_CiOalkyl, -CO(Cr
C4 alkyl), -CO(aryl), -CO(heteroaryl), C3-C8 cycloalkyl, Ci_CiOalkyl-C3-C8 cycloalky, C3-C8heterocycloalkyl, C6-Ci4 aryl, heteroaryl, and aryl-Ci_Ci0 alkyl;
R6 and R7 are each independently selected from the group consisting of hydrogen, Ci-Ci0 alkyl, Ci-Ci0 alkyl-C3-C8cycloalkyl, C3-C8heterocycloalkyl, aryl, -CO(Ci-C4 alkyl), and C3-C8 cycloalkyl-Ci-Cio alkyl; or R6 and R7 taken together with the nitrogen to which they are attached form a 5- or 6-membered saturated ring; and
R8 is H, a cation, or Ci_CiOalkyl which is unsubstituted or substituted with one or more substituents independently selected from the group consisting Of C3-C6 cycloalkyl, heterocycloalkyl, aryl, or heteroaryl. Of further interest are those compounds where:
R1 is Ci.Cioalkyl, C3-C8cycloalkyl, Ci_Ciθalkyl-C3-C8cycloalkyl, or Ci_CiOalkylaryl; R3 and R4 are each independently selected from the group consisting of hydrogen, Ci-C6 alkyl, C3-C6cycloalkyl, Ci-C6 alkyl-C3-C6cycloalkyl, C3-C6heterocycloalkyl, , Ci-C6 alkyl- C3-C6heterocycloalkyl, aryl, d_C6alkyl-aryl, heteroaryl, Ci_C6alkyl-heteroaryl, -CO(Ci-C4 alkyl), -CO(C3-C6 cycloalkyl), -CO(C3-C6 heterocycloalkyl), -CO(aryl), -CO(heteroaryl), and -CONR6R7; R2 is -OR8;
R6 and R7 are each independently selected from the group consisting of hydrogen, Ci-Ci0 alkyl, CrCi0 alkyl-C3-C8cycloalkyl, C3-C8heterocycloalkyl, aryl, -CO(CrC4 alkyl), and C3-C8 cycloalkyl-Q-Cio alkyl; or R6 and R7 taken together with the nitrogen to which they are attached form a 5- or 6-membered saturated ring; R8 is H or a cation; and each R9 is independently selected from the group consisting of hydrogen, -NR6R7, Ci-Cio alkyl, C3-C6 cycloalkyl, Ci-Ci0 alkyl-C3-C6 cycloalkyl, C3-C6 heterocycloalkyl, Ci-Ci0 alkyl-C3-C6 heterocycloalkyl, aryl, Ci-Ci0 alkylaryl, and heteroaryl group.
Specific compounds exemplified herein are: I) N- [(4-hydroxy- 10-methyl-2-oxo-2, 10-dihydropyrimido [ 1 ,2-a]benzimidazol-3 - yl)carbonyl]glycine; and
I)JSf- { [4-hydroxy-2-oxo- 10-(phenylmethyl)-2, 10-dihydropyrimido [ 1 ,2-a]benzimidazol-3- yl]carbonyl}glycine; or a salt thereof Processes for preparing the compound of formula (I) are also within the ambit of this invention. To illustrate, process for preparing a compound of formula (I)
Figure imgf000008_0001
wherein R1 and R2 are the same as defined above for formula (I), the process comprising treating a compound of formula A:
Figure imgf000009_0001
wherein R1 is the same as for that group in formula (I) and R' is a ester- forming group, with glycine sodium salt or glycine and an appropriate base, such as l,8-diazabicyclo[5.4.0]undec-7- ene, sodium ethoxide or sodium hydride, in an appropriate solvent, such as ethanol or 1 ,4-dioxane, under either conventional thermal conditions or by microwave irradiation, to form a compound of formula (I) where R2 is -OH.
The compounds of formula (I) may be prepared in crystalline or non-crystalline form, and, if crystalline, may optionally be solvated, e.g. as the hydrate. This invention includes within its scope stoichiometric solvates (e.g. hydrates) as well as compounds containing variable amounts of solvent (e.g. water).
Certain of the compounds described herein may contain one or more chiral atoms, or may otherwise be capable of existing as two enantiomers. The compounds claimed below include mixtures of enantiomers as well as purified enantiomers or enantiomerically enriched mixtures. Also included within the scope of the invention are the individual isomers of the compounds represented by formula (I), or claimed below, as well as any wholly or partially equilibrated mixtures thereof. The present invention also covers the individual isomers of the claimed compounds as mixtures with isomers thereof in which one or more chiral centers are inverted. Also, it is understood that any tautomers and mixtures of tautomers of the claimed compounds are included within the scope of the compounds of formula (I) as disclosed herein above or claimed herein below.
Where there are different isomeric forms they may be separated or resolved one from the other by conventional methods, or any given isomer may be obtained by conventional synthetic methods or by stereospecific or asymmetric syntheses.
While it is possible that, for use in therapy, a compound of formula (I), as well as salts, solvates and the like, may be administered as a neat preparation, i.e. no additional carrier, the more usual practice is to present the active ingredient confected with a carrier or diluent. Accordingly, the invention further provides pharmaceutical compositions, which includes a compound of formula (I) and salts, solvates and the like, and one or more pharmaceutically acceptable carriers, diluents, or excipients. The compounds of formula (I) and salts, solvates, etc, are as described above. The carrier(s), diluent(s) or excipient(s) must be acceptable in the sense of being compatible with the other ingredients of the formulation and not deleterious to the recipient thereof. In accordance with another aspect of the invention there is also provided a process for the preparation of a pharmaceutical formulation including admixing a compound of the formula (I), or salts, solvates etc, with one or more pharmaceutically acceptable carriers, diluents or excipients.
It will be appreciated by those skilled in the art that certain protected derivatives of compounds of formula (I), which may be made prior to a final deprotection stage, may not possess pharmacological activity as such, but may, in certain instances, be administered orally or parenterally and thereafter metabolised in the body to form compounds of the invention which are pharmacologically active. Such derivatives may therefore be described as "prodrugs". Further, certain compounds of the invention may act as prodrugs of other compounds of the invention. All protected derivatives and prodrugs of compounds of the invention are included within the scope of the invention. Examples of suitable pro-drugs for the compounds of the present invention are described in Drugs of Today, Volume 19, Number 9, 1983, pp 499 - 538 and in Topics in Chemistry, Chapter 31, pp 306 - 316 and in "Design of Prodrugs" by H. Bundgaard, Elsevier, 1985, Chapter 1 (the disclosures in which documents are incorporated herein by reference). It will further be appreciated by those skilled in the art, that certain moieties, known to those skilled in the art as "pro-moieties", for example as described by H. Bundgaard in "Design of Prodrugs" (the disclosure in which document is incorporated herein by reference) may be placed on appropriate functionalities when such functionalities are present within compounds of the invention. Preferred prodrugs for compounds of the invention include : esters, carbonate esters, hemi-esters, phosphate esters, nitro esters, sulfate esters, sulfoxides, amides, carbamates, azo-compounds, phosphamides, glycosides, ethers, acetals and ketals.
Pharmaceutical compositions may be presented in unit dose forms containing a predetermined amount of active ingredient per unit dose. Such a unit may contain, for example, 0.5 mg to 1 g, preferably 1 mg to 700 mg, more preferably 5 mg to 100 mg of a compound of the formula (I), depending on the condition being treated, the route of administration and the age, weight and condition of the patient, or pharmaceutical compositions may be presented in unit dose forms containing a predetermined amount of active ingredient per unit dose. Preferred unit dosage compositions are those containing a daily dose or sub-dose, as herein above recited, or an appropriate fraction thereof, of an active ingredient. Furthermore, such pharmaceutical compositions may be prepared by any of the methods well known in the pharmacy art. Pharmaceutical compositions may be adapted for administration by any appropriate route, for example by the oral (including buccal or sublingual), rectal, nasal, topical (including buccal, sublingual or transdermal), vaginal or parenteral (including subcutaneous, intramuscular, intravenous or intradermal) route. Such compositions may be prepared by any method known in the art of pharmacy, for example by bringing into association a compound of formal (I) with the carrier(s) or excipient(s). Pharmaceutical compositions adapted for oral administration may be presented as discrete units such as capsules or tablets; powders or granules; solutions or suspensions in aqueous or nonaqueous liquids; edible foams or whips; or oil-in-water liquid emulsions or water-in-oil liquid emulsions. Capsules are made by preparing a powder mixture, as described above, and filling formed gelatin sheaths. Glidants and lubricants such as colloidal silica, talc, magnesium stearate, calcium stearate or solid polyethylene glycol can be added to the powder mixture before the filling operation. A disintegrating or solubilizing agent such as agar-agar, calcium carbonate or sodium carbonate can also be added to improve the availability of the medicament when the capsule is ingested.
Moreover, when desired or necessary, suitable binders, lubricants, disintegrating agents and coloring agents can also be incorporated into the mixture. Suitable binders include starch, gelatin, natural sugars such as glucose or beta-lactose, corn sweeteners, natural and synthetic gums such as acacia, tragacanth or sodium alginate, carboxymethylcellulose, polyethylene glycol, waxes and the like. Lubricants used in these dosage forms include sodium oleate, sodium stearate, magnesium stearate, sodium benzoate, sodium acetate, sodium chloride and the like. Disintegrators include, without limitation, starch, methyl cellulose, agar, bentonite, xanthan gum and the like. Tablets are formulated, for example, by preparing a powder mixture, granulating or slugging, adding a lubricant and disintegrant and pressing into tablets. A powder mixture is prepared by mixing the compound, suitably comminuted, with a diluent or base as described above, and optionally, with a binder such as carboxymethylcellulose, an aliginate, gelatin, or polyvinyl pyrrolidone, a solution retardant such as paraffin, a resorption accelerator such as a quaternary salt and/or an absorption agent such as bentonite, kaolin or dicalcium phosphate. The powder mixture can be granulated by tablet forming dies by means of the addition of stearic acid, a stearate salt, talc or mineral oil. The lubricated mixture is then compressed into tablets. The compounds of the present invention can also be combined with a free flowing inert carrier and compressed into tablets directly without going through the granulating or slugging steps. A clear or opaque protective coating consisting of a sealing coat of shellac, a coating of sugar or polymeric material and a polish coating of wax can be provided. Dyestuffs can be added to these coatings to distinguish different unit dosages.
Oral fluids such as solution, syrups and elixirs can be prepared in dosage unit form so that a given quantity contains a predetermined amount of a compound of formula (I). Syrups can be prepared by dissolving the compound in a suitably flavored aqueous solution, while elixirs are prepared through the use of a non-toxic alcoholic vehicle. Suspensions can be formulated by dispersing the compound in a non-toxic vehicle. Solubilizers and emulsifiers such as ethoxylated isostearyl alcohols and polyoxy ethylene sorbitol ethers, preservatives, flavor additive such as peppermint oil or natural sweeteners or saccharin or other artificial sweeteners, and the like can also be added.
Where appropriate, dosage unit pharmaceutical compositions for oral administration can be microencapsulated. The formulation can also be prepared to prolong or sustain the release as for example by coating or embedding particulate material in polymers, wax or the like.
Pharmaceutical compositions adapted for rectal administration may be presented as suppositories or as enemas.
Pharmaceutical compositions adapted for vaginal administration may be presented as pessaries, tampons, creams, gels, pastes, foams or spray formulations. Pharmaceutical formulations adapted for parenteral administration include aqueous and non-aqueous sterile injection solutions which may contain anti-oxidants, buffers, bacteriostats and solutes which render the composition isotonic with the blood of the intended recipient; and aqueous and non-aqueous sterile suspensions which may include suspending agents and thickening agents. The pharmaceutical compositions may be presented in unit-dose or multi-dose containers, for example sealed ampoules and vials, and may be stored in a freeze-dried (lyophilized) condition requiring only the addition of the sterile liquid carrier, for example water for injections, immediately prior to use. Extemporaneous injection solutions and suspensions may be prepared from sterile powders, granules and tablets.
It should be understood that in addition to the ingredients particularly mentioned above, the pharmaceutical compositions may include other agents conventional in the art having regard to the type of formulation in question, for example those suitable for oral administration may include flavouring agents.
A therapeutically effective amount of a compound of the present invention will depend upon a number of factors including, for example, the age and weight of the intended recipient, the precise condition requiring treatment and its severity, the nature of the formulation, and the route of administration, and will ultimately be at the discretion of the attendant prescribing the medication. However, an effective amount of a compound of formula (I) for the treatment of anemia will generally be in the range of 0.1 to 100 mg/kg body weight of recipient per day and more usually in the range of 1 to 10 mg/kg body weight per day. Thus, for a 70kg adult mammal, the actual amount per day would usually be from 70 to 700 mg and this amount may be given in a single dose per day or more usually in a number (such as two, three, four, five or six) of sub-doses per day such that the total daily dose is the same. An effective amount of a salt or solvate, etc., may be determined as a proportion of the effective amount of the compound of formula (I) per se. It is envisaged that similar dosages would be appropriate for treatment of the other conditions referred to above. Definitions:
DMF - dimethylformamide, DBU -l,8-diazabicyclo[5.4.0]undec-7-ene, TFA - Trifluoroacetic acid. Chemical Background:
The compounds of this invention may be made by a variety of methods, including standard chemistry. Any previously defined variable will continue to have the previously defined meaning unless otherwise indicated. Illustrative general synthetic methods are set out below and then specific compounds of the invention as prepared are given in the examples. Compounds of general formula (I) may be prepared by methods known in the art of organic synthesis as set forth in part by the following synthesis schemes. In all of the schemes described below, it is well understood that protecting groups for sensitive or reactive groups are employed where necessary in accordance with general principles of chemistry. Protecting groups are manipulated according to standard methods of organic synthesis (T. W. Green and P. G. M. Wuts (1991) Protecting Groups in Organic Synthesis. John Wiley & Sons). These groups are removed at a convenient stage of the compound synthesis using methods that are readily apparent to those skilled in the art. The selection of processes as well as the reaction conditions and order of their execution shall be consistent with the preparation of compounds of formula (I). Those skilled in the art will recognize if a stereocenter exists in compounds of formula (I). Accordingly, the present invention includes both possible stereoisomers and includes not only racemic compounds but the individual enantiomers as well. When a compound is desired as a single enantiomer, it may be obtained by stereospecific synthesis or by resolution of the final product or any convenient intermediate. Resolution of the final product, an intermediate, or a starting material may be effected by any suitable method known in the art. See, for example, Stereochemistry of Organic Compounds by E. L. EHeI, S. H. Wilen, and L. N. Mander (Wiley-Interscience, 1994).
The compounds described herein may be made from commercially available starting materials or synthesized using known organic, inorganic and/or enzymatic processes.
Illustrated Methods of preparation Schemes
Included in the present invention is a process according to Scheme 1 for the synthesis of the compounds:
Scheme 1
Figure imgf000014_0001
Figure imgf000014_0002
a) KOH, RBr, EtOH; b) (CO2Et)3CH, 1,4-dioxane, μwave; c) glycine, DBU, EtOH, μwave.
Example 1
Figure imgf000014_0003
N-IY4-hvdroxy- 10-methyl-2-oxo-2, 10-dihvdropyrimidori ,2-αlbenzimidazo 1-3 -vDcarbonyll glycine
Ia) Ethyl 4-hvdroxy- 10-methyl-2-oxo-2, 10-dihvdropyrimidori ,2-α"|benzimidazole-3- carboxylate
A mixture of 1 -methyl- lH-benzimidazol-2-amine (1.00 g, 6.80 mmol) and triethyl methanetricarboxylate (4.30 mL, 20.4 mmol) in 1,4-dioxane (5.0 mL) was heated to 250 0C for 30 min. in a Biotage Initiator microwave synthesizer. Upon cooling, the reaction mixture was concentrated in vacuo and purified via flash column chromatography (0- 100% ethyl acetate in hexanes) to afford the title compound as a yellow solid (0.550 g, 28%). 1H NMR (400 MHz, DMSO-(Z6) δ ppm 13.8 (s, 1 H), 8.41 (d, J=7.8 Hz, 1 H), 7.73 (d, J=7.8 Hz, 1 H), 7.54 (td, ./=7.8, 1.3 Hz, 1 H), 7.43 (dd, J=15.5, 1.1 Hz, 1 H), 4.34 (q, J=7.1 Hz, 2 H), 3.74 (s, 3 H), 1.33 (t, J=7.1 Hz, 3 H). MS(ES+) m/e 288[M+H]+. 2b) N-r(4-hvdroxy-10-methyl-2-oxo-2,10-dihydropyrimidorL2-fllbenzimidazol-3- vDcarbonyll glycine
A mixture of the compound from Example Ia) (0.170 g, 0.590 mmol), glycine (0.066 g, 1.20 mmol) and l,8-diazabicyclo[5.4.0]undec-7-ene (0.180 mL, 1.20 mmol) in ethanol (5.0 mL) was heated to 180 0C for 20 min. in a Biotage Initiator® microwave synthesizer. Upon cooling, the reaction mixture was purified via preparative HPLC (YMC 75 X 30 mm column, 0.1% TFA in water and 0.1%TFA in acetonitrile) to afford the title compound as a white solid (0.110 g, 58%). IH NMR (400 MHz, DMSO-^6) δ ppm 16.32 (s, 1 H), 12.89 (br. s., 1 H), 9.74 (t, J=5.7 Hz, 1 H), 8.40 (d, J=7.6 Hz, 1 H), 7.75 (d, J=8.1 Hz, 1 H), 7.57 (dd, J=15.5, 1.1 Hz, 1 H), 7.45 (dd, J=15.5, 1.1 Hz, 1 H), 4.12 (d, J=5.6 Hz, 2 H), 3.75 (s, 3 H). MS(ES+) m/e 317 [M+H]+.
Example 2
Figure imgf000015_0001
N-{r4-hvdroxy-2-oxo-10-(phenylmethyl)-2,10-dihvdropyrimidori,2-fllbenzimidazol-3- yllcarbonyl} glycine
2a) 1 -(phenylmethyl)- lH-benzimidazol-2-amine
To a solution of lH-benzimidazol-2-amine (1.00 g, 7.50 mmol) and potassium hydroxide (0.840 g, 15.0 mmol) in ethanol (20.0 mL) at ambient temperature was added benzyl bromide (0.890 mL, 7.50 mmol) dropwise via syringe. The reaction mixture was stirred until the clear solution turned cloudy, and then quenched by water. The precipitate was collected by filtration and dried in vacuo to afford the title compound as a grey solid (1.30 g, 77%). 1H NMR (400 MHz, DMSO-(Z6) δ ppm 7.29 - 7.36 (m, 2 H), 7.22 - 7.27 (m, 1 H), 7.20 (d, J=I.5 Hz, 2 H), 7.14 (d, J=7.3 Hz, 1 H), 7.04 (d, J=7.8 Hz, 1 H), 6.92 (td, J=7.6, 1.0 Hz, 1 H), 6.82 (dd, J=7.6, 1.0 Hz, 1 H), 6.53 (s, 2 H), 5.26 (s, 2 H). MS(ES+) m/e 224[M+H]+.
2b) Ethyl 4-hydroxy-2-oxo- 10-(phenylmethyl)-2.10-dihydropyrimido I" 1.2- αlbenzimidazole-3-carboxylate
A mixture of the compound from Example 2a) (0.380 g, 1.70 mmol) and triethyl methanetricarboxylate (1.00 mL, 5.10 mmol) in 1,4-dioxane (10.0 mL) was heated to 250 0C for 30 min. in a Biotage Initiator microwave synthesizer. Upon cooling, the reaction mixture was concentrated in vacuo and washed with diethyl ether to afford the title compound as a grey solid (0.460 g, 74%). 1H NMR (400 MHz, DMSO-^6) δ ppm 13.8 (s, 1 H), 8.45 (d, J=7.3 Hz, 1 H), 7.62 (d, J=7.6 Hz, 1 H), 7.48 (td, J=7.8, 1.4 Hz, 1 H), 7.39 - 7.44 (m, 3 H), 7.27 - 7.38 (m, 4 H), 5.51 (s, 2 H), 4.36 (q, J=I.1 Hz, 2 H), 1.34 (t, J=I.1 Hz, 3 H). MS(ES+) m/e 364[M+H]+.
2c) N- { r4-hydroxy-2-oxo- 10-(phenylmethyl)-2, 10-dihydropyrimidor 1 ,2-α"|benzimidazol-3- yllcarbonyl} glycine
A mixture of the compound from Example 2b) (0.460 g, 1.27 mmol), glycine (0.143 g, 1.90 mmol) and l,8-diazabicyclo[5.4.0]undec-7-ene (0.380 mL, 2.54 mmol) in ethanol (6.0 mL) was heated to 150 0C for 30 min. in a Biotage Initiator® microwave synthesizer. Upon cooling, the reaction mixture was purified via preparative HPLC (YMC 75 X 30 mm column, 0.1% TFA in water and 0.1 %TFA in acetonitrile) to afford the title compound as a grey solid (0.210 g, 42%). 1H NMR (400 MHz, DMSO-^6) δ ppm 16.4 (s, 1 H), 12.9 (br. s., 1 H), 9.76 (t, J=5.6 Hz, 1 H), 8.43 (d, J=7.3 Hz, 1 H), 7.63 (d, J=7.6 Hz, 1 H), 7.49 (td, J=7.8, 1.4 Hz, 1 H), 7.40 - 7.46 (m, 3 H), 7.26 - 7.38 (m, 3 H), 5.52 (s, 2 H), 4.14 (d, J=5.6 Hz, 2 H). MS(ES+) m/e 393[M+H]+.
Biological Background:
The following references set out information about the target enzymes, HIF prolyl hydroxylases, and methods and materials for measuring inhibition of same by small molecules.
M. Hirsila, P. Koivunen, V. Gύnzler, K. I. Kivirikko, and J. Myllyharju "Characterization of the Human Prolyl 4-Hydroxylases That Modify the Hypoxia-inducible Factor" J. Biol. Chem., 2003, 278, 30772-30780.
C. Willam, L. G. Nicholls, P. J. Ratcliffe, C. W. Pugh, P. H. Maxwell "The prolyl hydroxylase enzymes that act as oxygen sensors regulating destruction of hypoxia-inducible factor α" Advan. Enzyme Regul, 2004, 44, 75-92
M. S. Wiesener, J. S. Jurgensen, C. Rosenberger, C. K. Scholze, J. H. Hδrstrup, C. Warnecke, S. Mandriota, I. Bechmann, U. A. Frei, C. W. Pugh, P. J. Ratcliffe, S. Bachmann, P. H. Maxwell, and K.-U. Eckardt "Widespread hypoxia-inducible expression of HIF-2:* in distinct cell populations of different organs" FASEB J, 2003, 17, 271-273.
S. J. Klaus, C. J. Molineaux, T. B. Neff, V. Guenzler-Pukall, I. Lansetmo Parobok, T. W. Seeley, R. C. Stephenson "Use of hypoxia-inducible factor α (HIF α) stabilizers for enhancing erythropoiesis" PCT Int. Appl. (2004), WO 2004108121 Al
C. Warnecke, Z. Zaborowska, J. Kurreck, V. A. Erdmann, U. Frei, M. Wiesener, and K.-U. Eckardt "Differentiating the functional role of hypoxia-inducible factor (HIF)- 1 α and HIF-2α (EPAS-I) by the use of RNA interference: erythropoietin is a HIF-2α target gene in Hep3B and Kelly cells" FASEB J, 2004, 18, 1462-1464. For the expression of EGLNS see:
R. K. Bruick and S. L. McKnight "A Conserved Family of Prolyl-4-Hydroxylases That Modify HIF" Science, 2001, 294, 1337-1340.
For the expression of HIF2a-C0DD see: a) P. Jaakkola, D. R. Mole, Y.-M. Tian, M. I. Wilson, J. Gielbert, S. J. Gaskell, A. von Kriegsheim, H. F. Hebestreit, M. Mukherji, C. J. Schofield, P. H. Maxwell, C. W. Pugh, P, J. Ratcliffe "Targeting of HIF-α to the von Hippel-Lindau Ubiquitylation Complex by O2- Regulated Prolyl Hydroxylation" Science, 2001, 292, 468-472. b) M. Ivan, K. Kondo, H. Yang, W. Kim, J. Valiando, M. Ohh, A. Salic, J. M. Asara, W. S.
Lane, W. G. Kaelin Jr. "HIFα Targeted for VHL-Mediated Destruction by Proline Hydroxylation: Implications for O2 Sensing" Science, 2001, 292, 464-468.
For the expression of VHL, elongin b and elongin c see: A. Pause, S. Lee, R. A. Worrell, D. Y. T. Chen, W. H. Burgess, W. M. Linehan, R. D.
Klausner "The von Hippel-Lindau tumor-suppressor gene product forms a stable complex with human CUL-2, a member of the Cdc53 family of proteins" Proc. Natl. Acad. ScL USA, 1997, 94, 2156-2161.
Biological Assay(s) EGLN3 Assay Materials:
His-MBP-EGLN3 (6HisMBPAttBlEGLN3(l-239)) was expressed in E. CoIi and purified from an amylase affinity column. Biotin-VBC [6HisSumoCysVHL(2-213), 6HisSumoElonginB(l-l 18), and 6HisSumoElonginC(l-l 12)] and His-GBl-HIF2α-CODD (6HisGBltevHIF2A(467-572)) were expressed from .E1. CoIi. Method:
Cy5-labelled HIF2α CODD, and a biotin-labeled VBC complex were used to determine EGLN3 inhibition. EGLN3 hydroxylation of the Cy5CODD substrate results in its recognition by the biotin-VBC. Addition of a Europium/streptavidin (Eu/SA) chelate results in proximity of Eu to Cy5 in the product, allowing for detection by energy transfer. A ratio of Cy5 to Eu emission (LANCE Ratio) is the ultimate readout, as this normalized parameter has significantly less variance than the Cy5 emission alone.
Then 5OnL of inhibitors in DMSO (or DMSO controls) were stamped into a 384-well low volume Corning NBS plate, followed by addition of 2.5 μL of enzyme [50 mL buffer (50 mM HEPES/50 mM KCl) + 1 mL of a 10 mg/mL BSA in buffer + 6.25 μL of a lOmg/mL FeCl2 solution in water + 100 μL of a 200 mM solution of ascorbic acid in water + 15.63 μL EGLN3] or control [50 mL buffer + 1 mL of a 10 mg/mL BSA in buffer + 6.25 μL of a lOmg/mL FeCl2 solution in water + 100 μL of a 200 mM solution of ascorbic acid in water]. Following a 3 minutes incubation, 2.5 μL of substrate [5OmL Buffer + 68.6 μL biotin-VBC + 70.4 μL Eu (at 710 μg/mL stock) + 91.6 μL Cy5CODD + 50 μL of a 20 mM solution of 2-oxoglutaric acid in water + 0.3mM CHAPS] was added and incubated for 30 minutes. The plate was loaded into a PerkinElmer Viewlux for imaging. For dose response experiments, normalized data were fit by ABASE/XC50 using the equation y = a + (b-a)/(l+(10Λx/10Λc)Λd), where a is the minimum % activity, b is the maximum % activity, c is the pIC5o, and d is the Hill slope.
The IC5O for exemplified compounds in the EGLN3 assay ranged from approximately 1 - 100 nanomolar. This range represents the data accumulated as of the time of the filing of this initial application. Later testing may show variations in IC5O data due to variations in reagents, conditions and variations in the method(s) used from those given herein above. So this range is to be viewed as illustrative, and not a absolute set of numbers.
Measure Epo protein produced by Hep3B cell line using ELISA method.
Hep3B cells obtained from the American Type Culture Collection (ATCC) are seeded at 2xlOΛ4 cells/well in Dulbecco's Modified Eagle Medium (DMEM) + 10% FBS in 96-well plates. Cells are incubated at 37degC/5% CO2/90% humidity (standard cell culture incubation conditions). After overnight adherence, medium is removed and replaced with DMEM without serum containing test compound or DMSO negative control. Following 48 hours incubation, cell culture medium is collected and assayed by ELISA to quantitate Epo protein.
The EC50 for exemplar compounds in the Hep3B ELISA assay ranged from approximately 1 - 20 micromolar using the reagents and under the conditions outlined herein above. This range represents the data accumulated as of the time of the filing of this initial application. Later testing may show variations in EC5O data due to variations in reagents, conditions and variations in the method(s) used from those given herein above. So this range is to be viewed as illustrative, and not a absolute set of numbers. These compound are believed to be useful in therapy as defined above and to not have unacceptable or untoward effects when used in compliance with a permited therapeutic regime.
The foregoing examples and assay have been set forth to illustrate the invention, not limit it. What is reserved to the inventors is to be determined by reference to the claims.

Claims

What is claimed is:
1. A compound of formula (I):
Figure imgf000019_0001
wherein:
R1 is -NR3R4, Ci.Cioalkyl, C2-Ci0alkenyl, C2-Ci0alkynyl, C3-C8cycloalkyl, Ci.Cioalkyl- C3-C8cycloalkyl, C5-C8cycloalkenyl, Ci_CiOalkyl-C5-C8 cycloalkenyl, C3-C8 heterocycloalkyl, Ci_CiOalkyl-C3-C8 heterocycloalkyl, aryl, Ci_CiOalkyl-aryl, heteroaryl or Ci_Ci0alkyl-heteroaryl;
R2 is -NR6R7 or -OR8;
R3 and R4 are each independently selected from the group consisting of hydrogen, Ci-Ci0 alkyl, C3-C8cycloalkyl, Ci-Ci0 alkyl-C3-C8cycloalkyl, C3-C8heterocycloalkyl, , Ci-Ci0 alkyl- C3-C8heterocycloalkyl, aryl, Ci_CiOalkyl-aryl, heteroaryl, Ci_Ci0alkyl-heteroaryl, -CO(Ci-C4 alkyl), -CO(C3-C6 cycloalkyl), -CO(C3-C6 heterocycloalkyl), -CO(aryl), -CO(heteroaryl), -CONR6R7, and -SO2(Ci-C4 alkyl); or R3 and R4 taken together with the nitrogen to which they are attached form a 5- or 6- or 7-membered saturated ring optionally containing one other heteroatom which is oxygen, nitrogen or sulphur; each R5 is independently selected from the group consisting of hydrogen, Ci_CiOalkyl, C2-Ci0alkenyl, C2_Cioalkynyl, -CO(Ci-C4 alkyl), -CO(aryl), -CO(heteroaryl), -CO(C3-C6 cycloalkyl), -CO(C3-C6 heterocycloalkyl), -SO2(Ci-C4 alkyl), C3-C8 cycloalkyl, C3-C8heterocycloalkyl, C6-Ci4 aryl, Ci_CiOalkyl-aryl, heteroaryl, and Ci_Ci0alkyl-heteroaryl;
R6 and R7 are each independently selected from the group consisting of hydrogen, Ci_Ci0 alkyl, C2_Ci0 alkenyl, C2_Ci0 alkynyl, C3-C8 cycloalkyl, C3-C8 heterocycloalkyl, aryl and heteroaryl; or R6 and R7 taken together with the nitrogen to which they are attached form a 5- or 6-membered saturated ring;
R8 is H, a cation, or Ci_CiOalkyl which is unsubstituted or substituted with one or more substituents independently selected from the group consisting Of C3-C6 cycloalkyl, heterocycloalkyl, aryl, and heteroaryl; each R9 is independently selected from the group consisting of hydrogen, nitro, cyano, halogen, -C(O)R5, -C(O)OR5, -OR5, -SR5, -S(O)R5, -S(O)2R5, -NR3R4, -CONR3R4, -N(R3)C(O)R5, -N(R3)C(O)OR5, -OC(O)NR3R4, -N(R3)C(O)NR3R4, -P(O)(OR5)2, -SO2NR3R4, -N(R3)SO2R5, Ci-Cio alkyl, Ci-Ci0 alkenyl, Ci-Ci0 alkynyl, C3-C6 cycloalkyl, C3-C6 heterocycloalkyl, aryl and heteroaryl; any carbon or heteroatom of R1, R2, R3, R4, R5, R6, R7, R8, or R9 is unsubstituted or, where possible, is substituted with one or more substituents independently selected from the group consisting of Ci-C6 alkyl, aryl, heteroaryl, halogen, -OR5, -NR3R4, cyano, nitro, -C(O)R5, - C(O)OR5, -SR5, -S(O)R5, -S(O)2R5, -NR3R4, -CONR3R4, -N(R3)C(O)R5, -N(R3)C(O)OR5, -OC(O)NR3R4, -N(R3)C(O)NR3R4, -SO2NR3R4, -N(R3)SO2R5, Ci-Qo alkenyl, Ci-Ci0 alkynyl, C3-C6 cycloalkyl, C3-C6 heterocycloalkyl, aryl and heteroaryl, wherein R3, R4, and R5 are the same as defined above; or a pharmaceutically acceptable salt thereof.
2. A compound according to claim 1 wherein:
R1 is Ci_CiOalkyl, C2_Ci0alkenyl, C2_Ci0alkynyl, C3-C8cycloalkyl, Ci_CiOalkyl- C3-C8cycloalkyl, or C5-C8cycloalkenyl, Ci_Ci0alkyl-C5-C8cycloalkenyl, aryl, or Ci_CiOalkylaryl;
R2 is -NR6R7 or -OR8;
R3 and R4 are each independently selected from the group consisting of hydrogen, Ci-C6 alkyl, C3-C6cycloalkyl, Ci-C6 alkyl-C3-C6cycloalkyl, C3-C6heterocycloalkyl, , Ci-C6 alkyl- C3-C6heterocycloalkyl, aryl, Ci_C6alkyl-aryl, heteroaryl, Ci_C6alkyl-heteroaryl, -CO(Ci-C4 alkyl), -CO(C3-C6 cycloalkyl), -CO(C3-C6 heterocycloalkyl), -CO(aryl), -CO(heteroaryl), -CONR6R7, and -SO2(Ci-C4 alkyl); or R3 and R4 taken together with the nitrogen to which they are attached form a 5- or 6-membered saturated ring optionally containing one other heteroatom which is oxygen, nitrogen or sulphur;
R5 is independently selected from the group consisting of hydrogen, Ci_CiOalkyl, C2.Ci0alkenyl, C2.Ci0alkynyl, -CO(CrC4 alkyl), -CO(aryl), -CO(heteroaryl), -SO2(CrC4 alkyl), C3-C8 cycloalkyl, C3-C8heterocycloalkyl, C6-Ci4 aryl, heteroaryl, and aryl-Ci_Ci0 alkyl;
R6 and R7 are each independently selected from the group consisting of hydrogen, Ci-Ci0 alkyl, Ci-Ci0 alkyl-C3-C8cycloalkyl, C3-C8heterocycloalkyl, aryl, -CO(Ci-C4 alkyl), or C3-C8 cycloalkyl-Ci-Cio alkyl; or R6 and R7 taken together with the nitrogen to which they are attached form a 5- or 6-membered saturated ring;
R8 is H or a cation, or Ci_CiOalkyl which is unsubstituted or substituted with one or more substituents independently selected from the group consisting Of C3-C6 cycloalkyl, heterocycloalkyl, aryl, and heteroaryl; and each R9 is independently selected from the group consisting of hydrogen, -NR3R4, Ci-Ci0 alkyl, C3-C6 cycloalkyl, Ci-Ci0 alkyl-C3-C6 cycloalkyl, C3-C6 heterocycloalkyl, Ci-Ci0 alkyl-C3-C6 heterocycloalkyl, aryl, Ci-Ci0 alkylaryl, or heteroaryl group; or a pharmaceutically acceptable salt or solvate thereof.
3. A compound according to claim 2 wherein:
R1 is Ci.Cioalkyl, C3-C8cycloalkyl, Ci_Ci0alkyl-C3-C8cycloalkyl, aryl, or Ci.Cioalkylaryl;
R2 is -NR6R7 or -OR8;
R3 and R4 are each independently selected from the group consisting of hydrogen, Ci-C6 alkyl, C3-C6cycloalkyl, C1-C6 alkyl-C3-C6cycloalkyl, C3-C6heterocycloalkyl, , C1-C6 alkyl- C3-C6heterocycloalkyl, aryl, Q.Cealkyl-aryl, heteroaryl, Q.Cealkyl-heteroaryl, -CO(C1-C4 alkyl), -CO(C3-C6 cycloalkyl), -CO(C3-C6 heterocycloalkyl), -CO(aryl), -CO(heteroaryl), -CONR6R7, and -802(C1-C4 alkyl); or R3 and R4 taken together with the nitrogen to which they are attached form a 5- or 6-membered saturated ring optionally containing one other heteroatom which is oxygen, nitrogen or sulphur;
R5 is independently selected from the group consisting of hydrogen, C^Qoalkyl, -CO(C1- C4 alkyl), -CO(aryl), -CO(heteroaryl), C3-C8 cycloalkyl, dAoalkyl-CrQ cycloalky, C3-C8heterocycloalkyl, C6-C14 aryl, heteroaryl, and aryl-C^Qo alkyl;
R6 and R7 are each independently selected from the group consisting of hydrogen, C1-C1O alkyl, C1-C10 alkyl-C3-C8cycloalkyl, C3-C8heterocycloalkyl, aryl, -CO(C1-C4 alkyl), and C3-C8 cycloalkyl-CrCio alkyl; or R6 and R7 taken together with the nitrogen to which they are attached form a 5- or 6-membered saturated ring;
R8 is H or a cation, or C^Ctoalkyl which is unsubstituted or substituted with one or more substituents independently selected from the group consisting Of C3-C6 cycloalkyl, heterocycloalkyl, aryl, and heteroaryl; each R9 is independently selected from the group consisting of hydrogen, -NR6R7, C1-C10 alkyl, C3-C6 cycloalkyl, C1-C10 alkyl-C3-C6 cycloalkyl, C3-C6 heterocycloalkyl, C1-C10 alkyl-C3-C6 heterocycloalkyl, aryl, C1-C10 alkylaryl, and heteroaryl group; and or a pharmaceutically acceptable salt thereof.
4. A compound according to claim 4 wherein
R1 is QAoalkyl, C3-C8cycloalkyl, QAoalkyl-CrCscycloalkyl, or QAoalkylaryl;
R2 is -NR6R7 or -OR8;
R3 and R4 are each independently selected from the group consisting of hydrogen, C1-C6 alkyl, C3-C6cycloalkyl, C1-C6 alkyl-C3-C6cycloalkyl, C3-C6heterocycloalkyl, , C1-C6 alkyl- C3-C6heterocycloalkyl, aryl,
Figure imgf000021_0001
-CO(C1-C4 alkyl), -CO(C3-C6 cycloalkyl), -CO(C3-C6 heterocycloalkyl), -CO(aryl), -CO(heteroaryl), and -CONR6R7;
R6 and R7 are each independently selected from the group consisting of hydrogen, C1-C10 alkyl, C1-C10 alkyl-C3-C8cycloalkyl, C3-C8heterocycloalkyl, aryl, -CO(C1-C4 alkyl), and C3-C8 cycloalkyl-Ci-Cio alkyl; or R6 and R7 taken together with the nitrogen to which they are attached form a 5- or 6-membered saturated ring;
R8 is H, a cation, or Ci_Cioalkyl which is unsubstituted or substituted with one or more substituents independently selected from the group consisting Of C3-C6 cycloalkyl, heterocycloalkyl, aryl, and heteroaryl; and each R9 is independently selected from the group consisting of hydrogen, -NR6R7, Ci-Ci0 alkyl, C3-C6 cycloalkyl, CrCi0 alkyl-C3-C6 cycloalkyl, C3-C6 heterocycloalkyl, CrCio alkyl-C3-C6 heterocycloalkyl, aryl, Ci-Ci0 alkylaryl, and heteroaryl group; or a pharmaceutically acceptable salt or solvate thereof.
5. A compound according to claim 1 which is:
N-[(4-hydroxy- 10-methyl-2-oxo-2, 10-dihydropyrimido[l ,2-a]benzimidazol-3- yl)carbonyl]glycine; or
N-{[4-hydroxy-2-oxo-10-(phenylmethyl)-2,10-dihydropyrimido[l,2-a]benzimidazol-3- yl]carbonyl}glycine; or a pharmaceutically acceptable salt or solvate thereof.
6. A method for treating anemia in a mammal, which method comprises administering an effective amount of a compound of formula (I) or a salt thereof according to claim 1 to a mammalian suffering from anemia which can be treated by inhibiting HIF prolyl hydroxylases.
7. A pharmaceutical composition comprising a compound of formula (I) or a salt according to claim 1 and one or more of pharmaceutically acceptable carriers, diluents and excipients.
8. A process for preparing a compound of formula (I)
Figure imgf000022_0001
wherein:
R1 is -NR3R4, Ci.Cioalkyl, C2-Ci0alkenyl, C2-Ci0alkynyl, C3-C8cycloalkyl, d-doalkyl- C3-C8cycloalkyl, C5-C8cycloalkenyl, Ci_Cioalkyl-C5-C8 cycloalkenyl, C3-C8 heterocycloalkyl, Ci_CiOalkyl-C3-C8 heterocycloalkyl, aryl, Ci_CiOalkyl-aryl, heteroaryl or Ci_Ci0alkyl-heteroaryl;
R2 is -NR6R7 or -OR8;
R and R are each independently selected from the group consisting of hydrogen, Ci-C 10 alkyl, C3-C8cycloalkyl, C1-C10 alkyl-C3-C8cycloalkyl, C3-C8heterocycloalkyl, , C1-C10 alkyl- C3-C8heterocycloalkyl, aryl, C^C^alkyl-aryl, heteroaryl, Q.Qoalkyl-heteroaryl, -CO(C1-C4 alkyl), -CO(C3-C6 cycloalkyl), -CO(C3-C6 heterocycloalkyl), -CO(aryl), -CO(heteroaryl), -CONR6R7, -802(C1-C4 alkyl); or R3 and R4 taken together with the nitrogen to which they are attached form a 5- or 6- or 7-membered saturated ring optionally containing one other heteroatom selected from oxygen, nitrogen and sulphur;
R6 and R7 are each independently selected from the group consisting of hydrogen, C1-C10 alkyl, C2-C10 alkenyl, C2-C10 alkynyl, C3-C8 cycloalkyl, C3-C8 heterocycloalkyl, aryl and heteroaryl;
R8 is H or a cation, or C1-C1OaUCyI which is unsubstituted or substituted with one or more substituents independently selected from the group consisting Of C3-C6 cycloalkyl, heterocycloalkyl, aryl, and heteroaryl; each R9 is independently selected from the group consisting of hydrogen, nitro, cyano, halogen, -C(O)R5, -C(O)OR5, -OR5, -SR5, -S(O)R5, -S(O)2R5, -NR3R4, -CONR3R4, -N(R3)C(O)R5, -N(R3)C(O)OR5, -OC(O)NR3R4, -N(R3)C(O)NR3R4, -P(O)(OR5)2, -SO2NR3R4, -N(R3)SO2R5 and a C1-C10 alkyl, C1-C10 alkenyl, C1-C10 alkynyl, C3-C6 cycloalkyl, C3-C6 heterocycloalkyl, aryl and heteroaryl group; each R5 is independently selected from the group consisting of hydrogen, Q.Qoalkyl, C2_C10alkenyl, C2_C10alkynyl, -CO(C1-C4 alkyl), -CO(aryl), -CO(heteroaryl), -CO(C3-C6 cycloalkyl), -CO(C3-C6 heterocycloalkyl), -SO2(C1-C4 alkyl), C3-C8 cycloalkyl, C3-C8heterocycloalkyl, C6-C14 aryl, Q.Qoalkyl-aryl, heteroaryl, and Q-Qoalkyl-heteroaryl; where any carbon or heteroatom of R1, R2, R3, R4, R5, R6, R7, R8, or R9 is unsubstituted or, where possible, is substituted with one or more substituents independently selected from C1-C6 alkyl, aryl, heteroaryl, halogen, -OR5, -NR3R4, cyano, nitro, -C(O)R5, -C(O)OR5, -SR5, -S(O)R5, -S(O)2R5, -NR3R4, -CONR3R4, -N(R3)C(O)R5, -N(R3)C(O)OR5, -OC(O)NR3R4, -N(R3)C(O)NR3R4, -SO2NR3R4, -N(R3)SO2R5, C1-C10 alkenyl, C1-C10 alkynyl, C3-C6 cycloalkyl, C3-C6 heterocycloalkyl, aryl or heteroaryl group, wherein R3, R4, and R5 are the same as defined above; comprising treating a compound of formula A:
Figure imgf000024_0001
wherein R1 is the same as for that group in formula (I) and R' is a ester- forming group, with glycine sodium salt or glycine and an appropriate base, such as l,8-diazabicyclo[5.4.0]undec-7- ene, sodium ethoxide or sodium hydride, in an appropriate solvent, such as ethanol or 1 ,4-dioxane, under either conventional thermal conditions or by microwave irradiation, to form a compound of formula (I) where R2 is -OH.
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