WO2005075673A3 - Detection, identification and differentiation of proteus species using the spacer region - Google Patents

Detection, identification and differentiation of proteus species using the spacer region Download PDF

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Publication number
WO2005075673A3
WO2005075673A3 PCT/EP2005/050464 EP2005050464W WO2005075673A3 WO 2005075673 A3 WO2005075673 A3 WO 2005075673A3 EP 2005050464 W EP2005050464 W EP 2005050464W WO 2005075673 A3 WO2005075673 A3 WO 2005075673A3
Authority
WO
WIPO (PCT)
Prior art keywords
proteus
identification
species
detection
region
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Ceased
Application number
PCT/EP2005/050464
Other languages
French (fr)
Other versions
WO2005075673A2 (en
Inventor
Geert Jannes
Wouter Mijs
Gerd Haberhausen
Thomas Emrich
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Fujirebio Europe NV SA
F Hoffmann La Roche AG
Original Assignee
Innogenetics NV SA
F Hoffmann La Roche AG
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Innogenetics NV SA, F Hoffmann La Roche AG filed Critical Innogenetics NV SA
Priority to EP05716622.5A priority Critical patent/EP1713937B1/en
Priority to CA2553270A priority patent/CA2553270C/en
Priority to ES05716622.5T priority patent/ES2597841T3/en
Priority to JP2006551852A priority patent/JP4969250B2/en
Publication of WO2005075673A2 publication Critical patent/WO2005075673A2/en
Publication of WO2005075673A3 publication Critical patent/WO2005075673A3/en
Anticipated expiration legal-status Critical
Ceased legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6888—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
    • C12Q1/689—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for bacteria

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Analytical Chemistry (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Immunology (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Physics & Mathematics (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)

Abstract

The present invention relates to new nucleic acid sequences derived from the ITS region, between the 16S and 23S ribosomal ribonucleic acid (rRNA) or rRNA genes, to be used for the specific detection and/or identification of Proteus species, in particular of Proteus mirabilis, Proteus vulgaris and/or Proteus penneri, in a biological sample. The present invention relates also to a method for the specific detection and/or identification of Proteus species, in particular Proteus mirabilis, Proteus vulgaris and/or Proteus penneri, using said new nucleic acid sequences derived from the ITS (Internal Transcribed Spacer) region. It relates also to nucleic acid primers to be used for the amplification of said spacer region of Proteus species in a sample.
PCT/EP2005/050464 2004-02-06 2005-02-03 Detection, identification and differentiation of proteus species using the spacer region Ceased WO2005075673A2 (en)

Priority Applications (4)

Application Number Priority Date Filing Date Title
EP05716622.5A EP1713937B1 (en) 2004-02-06 2005-02-03 Detection, identification and differentiation of proteus species using the spacer region
CA2553270A CA2553270C (en) 2004-02-06 2005-02-03 Detection, identification and differentiation of proteus species using the spacer region
ES05716622.5T ES2597841T3 (en) 2004-02-06 2005-02-03 Detection, identification and differentiation of Proteus species using the spacer region
JP2006551852A JP4969250B2 (en) 2004-02-06 2005-02-03 Proteus species detection, identification, and differentiation using spacer regions

Applications Claiming Priority (4)

Application Number Priority Date Filing Date Title
EP04447030.0 2004-02-06
EP04447030 2004-02-06
US54287504P 2004-02-10 2004-02-10
US60/542,875 2004-02-10

Publications (2)

Publication Number Publication Date
WO2005075673A2 WO2005075673A2 (en) 2005-08-18
WO2005075673A3 true WO2005075673A3 (en) 2005-12-01

Family

ID=34933010

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/EP2005/050464 Ceased WO2005075673A2 (en) 2004-02-06 2005-02-03 Detection, identification and differentiation of proteus species using the spacer region

Country Status (6)

Country Link
US (3) US20050176048A1 (en)
EP (1) EP1713937B1 (en)
JP (1) JP4969250B2 (en)
CA (1) CA2553270C (en)
ES (1) ES2597841T3 (en)
WO (1) WO2005075673A2 (en)

Families Citing this family (11)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CA2553270C (en) * 2004-02-06 2016-08-23 Innogenetics N.V. Detection, identification and differentiation of proteus species using the spacer region
US20060099618A1 (en) * 2004-09-30 2006-05-11 Innogenetics, N.V. Detection, identification and differentiation of Serratia species using the spacer region
CN101215567B (en) * 2007-12-26 2010-12-22 中国人民解放军疾病预防控制所 Nucleic acid identification sequence and detection method of Proteus mirabilis
TWI384076B (en) * 2009-08-06 2013-02-01 Nat Univ Chung Hsing Proteus mirabilis tmr isolate having the abilities to decompose polystyrene and/or styrofoam and uses of the same
US10570464B2 (en) 2016-05-09 2020-02-25 The Board Of Trustees Of The Leland Stanford Junior University Bacterial pathogen identification by high resolution melting analysis
CN106566889B (en) * 2016-11-07 2020-02-04 深圳市疾病预防控制中心 Primer, probe, kit and method for detecting proteus mirabilis
CN110951895B (en) * 2019-12-24 2021-03-23 重庆市畜牧科学院 System and method for detecting and distinguishing proteus mirabilis, proteus vulgaris and proteus pani
CN112159756A (en) * 2020-09-16 2021-01-01 复旦大学 A rapid PCR amplification and CRISPR visual detection device and detection method
CN112779189B (en) * 2021-01-27 2022-04-08 华南农业大学 A soil Proteus and its application
CN113512601B (en) * 2021-06-30 2023-10-20 广东省科学院微生物研究所(广东省微生物分析检测中心) Molecular targets and quantitative detection methods for screening Proteus spp.
CN114317788A (en) * 2021-12-30 2022-04-12 漳州傲农现代农业开发有限公司 Probe primer combination for detecting swine proteus mirabilis, kit and method thereof

Citations (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6025132A (en) * 1994-06-24 2000-02-15 Innogenetics N.V. Probes targeted to rRNA spacer regions, methods and kits for using said probes, for the detection of respiratory tract pathogens
WO2000052203A2 (en) * 1999-03-02 2000-09-08 King's College London Identification of bacteria by amplification and probing
WO2000066785A2 (en) * 1999-05-03 2000-11-09 Gen-Probe Incorporated Polynucleotide probes for detection and quantitation of bacteria in the family enterobacteriaceae
US6512105B1 (en) * 1986-11-24 2003-01-28 Gen-Probe Incorporated Methods for making oligonucleotide probes for the detection and/or quantitation of non-viral organisms
WO2003095677A1 (en) * 2002-05-09 2003-11-20 Medigenes Nucleic acid probes for detection of non-viral organisms

Family Cites Families (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5210015A (en) * 1990-08-06 1993-05-11 Hoffman-La Roche Inc. Homogeneous assay system using the nuclease activity of a nucleic acid polymerase
US5474796A (en) * 1991-09-04 1995-12-12 Protogene Laboratories, Inc. Method and apparatus for conducting an array of chemical reactions on a support surface
CA2553270C (en) * 2004-02-06 2016-08-23 Innogenetics N.V. Detection, identification and differentiation of proteus species using the spacer region

Patent Citations (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6512105B1 (en) * 1986-11-24 2003-01-28 Gen-Probe Incorporated Methods for making oligonucleotide probes for the detection and/or quantitation of non-viral organisms
US6025132A (en) * 1994-06-24 2000-02-15 Innogenetics N.V. Probes targeted to rRNA spacer regions, methods and kits for using said probes, for the detection of respiratory tract pathogens
WO2000052203A2 (en) * 1999-03-02 2000-09-08 King's College London Identification of bacteria by amplification and probing
WO2000066785A2 (en) * 1999-05-03 2000-11-09 Gen-Probe Incorporated Polynucleotide probes for detection and quantitation of bacteria in the family enterobacteriaceae
WO2003095677A1 (en) * 2002-05-09 2003-11-20 Medigenes Nucleic acid probes for detection of non-viral organisms

Also Published As

Publication number Publication date
WO2005075673A2 (en) 2005-08-18
EP1713937B1 (en) 2016-08-17
US20090098558A1 (en) 2009-04-16
ES2597841T3 (en) 2017-01-23
JP2007520226A (en) 2007-07-26
CA2553270A1 (en) 2005-08-18
JP4969250B2 (en) 2012-07-04
US20130171656A1 (en) 2013-07-04
US20050176048A1 (en) 2005-08-11
CA2553270C (en) 2016-08-23
EP1713937A2 (en) 2006-10-25

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