WO2004088325A3 - Determination of proteins and/or other molecules using mass spectroscopy - Google Patents
Determination of proteins and/or other molecules using mass spectroscopy Download PDFInfo
- Publication number
- WO2004088325A3 WO2004088325A3 PCT/US2004/009376 US2004009376W WO2004088325A3 WO 2004088325 A3 WO2004088325 A3 WO 2004088325A3 US 2004009376 W US2004009376 W US 2004009376W WO 2004088325 A3 WO2004088325 A3 WO 2004088325A3
- Authority
- WO
- WIPO (PCT)
- Prior art keywords
- proteins
- species
- substrate
- self
- cases
- Prior art date
Links
- 102000004169 proteins and genes Human genes 0.000 title abstract 5
- 108090000623 proteins and genes Proteins 0.000 title abstract 5
- 238000004949 mass spectrometry Methods 0.000 title abstract 4
- 238000000034 method Methods 0.000 abstract 4
- 239000000758 substrate Substances 0.000 abstract 4
- 239000013545 self-assembled monolayer Substances 0.000 abstract 3
- 150000003384 small molecules Chemical class 0.000 abstract 3
- 239000013592 cell lysate Substances 0.000 abstract 1
- 230000003993 interaction Effects 0.000 abstract 1
- 238000000816 matrix-assisted laser desorption--ionisation Methods 0.000 abstract 1
- 238000001840 matrix-assisted laser desorption--ionisation time-of-flight mass spectrometry Methods 0.000 abstract 1
- 238000002493 microarray Methods 0.000 abstract 1
- 239000002094 self assembled monolayer Substances 0.000 abstract 1
- 230000009897 systematic effect Effects 0.000 abstract 1
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 abstract 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C40—COMBINATORIAL TECHNOLOGY
- C40B—COMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
- C40B30/00—Methods of screening libraries
- C40B30/04—Methods of screening libraries by measuring the ability to specifically bind a target molecule, e.g. antibody-antigen binding, receptor-ligand binding
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B82—NANOTECHNOLOGY
- B82Y—SPECIFIC USES OR APPLICATIONS OF NANOSTRUCTURES; MEASUREMENT OR ANALYSIS OF NANOSTRUCTURES; MANUFACTURE OR TREATMENT OF NANOSTRUCTURES
- B82Y15/00—Nanotechnology for interacting, sensing or actuating, e.g. quantum dots as markers in protein assays or molecular motors
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B82—NANOTECHNOLOGY
- B82Y—SPECIFIC USES OR APPLICATIONS OF NANOSTRUCTURES; MEASUREMENT OR ANALYSIS OF NANOSTRUCTURES; MANUFACTURE OR TREATMENT OF NANOSTRUCTURES
- B82Y30/00—Nanotechnology for materials or surface science, e.g. nanocomposites
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/68—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
- G01N33/6803—General methods of protein analysis not limited to specific proteins or families of proteins
- G01N33/6842—Proteomic analysis of subsets of protein mixtures with reduced complexity, e.g. membrane proteins, phosphoproteins, organelle proteins
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/68—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
- G01N33/6803—General methods of protein analysis not limited to specific proteins or families of proteins
- G01N33/6848—Methods of protein analysis involving mass spectrometry
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/68—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
- G01N33/6803—General methods of protein analysis not limited to specific proteins or families of proteins
- G01N33/6848—Methods of protein analysis involving mass spectrometry
- G01N33/6851—Methods of protein analysis involving laser desorption ionisation mass spectrometry
-
- H—ELECTRICITY
- H01—ELECTRIC ELEMENTS
- H01J—ELECTRIC DISCHARGE TUBES OR DISCHARGE LAMPS
- H01J49/00—Particle spectrometers or separator tubes
- H01J49/02—Details
- H01J49/04—Arrangements for introducing or extracting samples to be analysed, e.g. vacuum locks; Arrangements for external adjustment of electron- or ion-optical components
- H01J49/0409—Sample holders or containers
- H01J49/0418—Sample holders or containers for laser desorption, e.g. matrix-assisted laser desorption/ionisation [MALDI] plates or surface enhanced laser desorption/ionisation [SELDI] plates
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N2610/00—Assays involving self-assembled monolayers [SAMs]
-
- Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
- Y10—TECHNICAL SUBJECTS COVERED BY FORMER USPC
- Y10T—TECHNICAL SUBJECTS COVERED BY FORMER US CLASSIFICATION
- Y10T436/00—Chemistry: analytical and immunological testing
- Y10T436/24—Nuclear magnetic resonance, electron spin resonance or other spin effects or mass spectrometry
Landscapes
- Life Sciences & Earth Sciences (AREA)
- Health & Medical Sciences (AREA)
- Engineering & Computer Science (AREA)
- Molecular Biology (AREA)
- Chemical & Material Sciences (AREA)
- Physics & Mathematics (AREA)
- Immunology (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Bioinformatics & Computational Biology (AREA)
- Urology & Nephrology (AREA)
- Hematology (AREA)
- Biomedical Technology (AREA)
- General Health & Medical Sciences (AREA)
- General Physics & Mathematics (AREA)
- Medicinal Chemistry (AREA)
- Biochemistry (AREA)
- Analytical Chemistry (AREA)
- Biophysics (AREA)
- Nanotechnology (AREA)
- Biotechnology (AREA)
- Cell Biology (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Microbiology (AREA)
- Food Science & Technology (AREA)
- Spectroscopy & Molecular Physics (AREA)
- Pathology (AREA)
- Crystallography & Structural Chemistry (AREA)
- Organic Chemistry (AREA)
- Optics & Photonics (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Condensed Matter Physics & Semiconductors (AREA)
- Materials Engineering (AREA)
- Composite Materials (AREA)
- General Chemical & Material Sciences (AREA)
- Other Investigation Or Analysis Of Materials By Electrical Means (AREA)
- Peptides Or Proteins (AREA)
Abstract
Priority Applications (5)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
CA002520191A CA2520191A1 (en) | 2003-03-26 | 2004-03-26 | Determination of proteins and/or other molecules using mass spectroscopy |
AU2004225496A AU2004225496A1 (en) | 2003-03-26 | 2004-03-26 | Determination of proteins and/or other molecules using mass spectroscopy |
JP2006509366A JP2006521567A (en) | 2003-03-26 | 2004-03-26 | Measurement of proteins and / or other molecules using mass spectrometry |
US10/550,826 US20070249060A1 (en) | 2003-03-26 | 2004-03-26 | Determination of Proteins and/or Other Molecules Using Mass Spectroscopy |
EP04758432A EP1606629A2 (en) | 2003-03-26 | 2004-03-26 | Determination of proteins and/or other molecules using mass spectroscopy |
Applications Claiming Priority (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US45810503P | 2003-03-26 | 2003-03-26 | |
US60/458,105 | 2003-03-26 |
Publications (2)
Publication Number | Publication Date |
---|---|
WO2004088325A2 WO2004088325A2 (en) | 2004-10-14 |
WO2004088325A3 true WO2004088325A3 (en) | 2005-03-24 |
Family
ID=33131754
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
PCT/US2004/009376 WO2004088325A2 (en) | 2003-03-26 | 2004-03-26 | Determination of proteins and/or other molecules using mass spectroscopy |
Country Status (6)
Country | Link |
---|---|
US (1) | US20070249060A1 (en) |
EP (1) | EP1606629A2 (en) |
JP (1) | JP2006521567A (en) |
AU (1) | AU2004225496A1 (en) |
CA (1) | CA2520191A1 (en) |
WO (1) | WO2004088325A2 (en) |
Families Citing this family (16)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CA2529016A1 (en) | 2003-06-12 | 2004-12-23 | Accupath Diagnostic Laboratories, Inc. | Method and system for the analysis of high density cells samples |
US8294090B1 (en) * | 2004-10-29 | 2012-10-23 | Japan Science And Technology Agency | Substrate for MALDI-TOF MS and mass spectrometry method using the same |
JP2006170857A (en) * | 2004-12-16 | 2006-06-29 | Toyo Kohan Co Ltd | Method for mass spectrometry of biomolecule on solid support and solid support therefor |
ATE548651T1 (en) * | 2005-06-16 | 2012-03-15 | 3M Innovative Properties Co | METHOD FOR CLASSIFICATION OF CHEMICALLY CROSS-LINKED CELLULAR SAMPLES USING MASS SPECTRA |
WO2007145228A1 (en) * | 2006-06-13 | 2007-12-21 | National Institute Of Advanced Industrial Science And Technology | Method for manufacturing microarray |
KR100963539B1 (en) * | 2007-12-11 | 2010-06-15 | 한국표준과학연구원 | Evaluation Method of Organic or Bio- Conjugation on Nanoparticles Using Imaging of Time-of-Flight Secondary Ion Mass Spectrometry |
JP4911415B2 (en) * | 2008-03-28 | 2012-04-04 | 独立行政法人産業技術総合研究所 | Non-specific adsorption suppression material |
US9523680B2 (en) * | 2010-06-30 | 2016-12-20 | Ambergen, Inc. | Global Proteomic screening of random bead arrays using mass spectrometry imaging |
GB201110272D0 (en) | 2011-06-17 | 2011-08-03 | Isis Innovation | Metod of detection by mass spectrometry |
EP2917715B1 (en) | 2012-11-06 | 2019-04-03 | Biodot, Inc. | Controlled printing of a cell sample for karyotyping |
WO2014197991A1 (en) | 2013-06-12 | 2014-12-18 | Muhammad Yousaf | Compounds for promoting liposomal and cellular adhesion and compositions and methods of use thereof |
KR101675021B1 (en) * | 2014-11-12 | 2016-11-10 | 가천대학교 산학협력단 | Method and apparatus for producing micro-arrray substrate |
US9968683B2 (en) | 2014-12-17 | 2018-05-15 | Organolinx Corp. | Method for conjugating molecules |
WO2019232512A1 (en) * | 2018-06-01 | 2019-12-05 | Musc Foundatiion For Research Development | Glycan analysis of proteins and cells |
CN111089892A (en) * | 2019-12-31 | 2020-05-01 | 北京毅新博创生物科技有限公司 | Detection product for detecting A1 and A2 type β casein in dairy products by mass spectrometry |
WO2024062974A1 (en) * | 2022-09-22 | 2024-03-28 | 日産化学株式会社 | Remover composition for light irradiation removal, multilayer body, and method for producing processed semiconductor substrate |
Citations (2)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO2002006834A2 (en) * | 2000-07-19 | 2002-01-24 | Pointilliste, Inc. | Nested sorting and high throughput screening |
WO2004005918A2 (en) * | 2002-07-05 | 2004-01-15 | University Of Chicago | Characterization of biochips containing self-assembled monolayers with maldi-tof-ms |
Family Cites Families (5)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US5776748A (en) * | 1993-10-04 | 1998-07-07 | President And Fellows Of Harvard College | Method of formation of microstamped patterns on plates for adhesion of cells and other biological materials, devices and uses therefor |
US5512131A (en) * | 1993-10-04 | 1996-04-30 | President And Fellows Of Harvard College | Formation of microstamped patterns on surfaces and derivative articles |
US5620850A (en) * | 1994-09-26 | 1997-04-15 | President And Fellows Of Harvard College | Molecular recognition at surfaces derivatized with self-assembled monolayers |
US5731152A (en) * | 1996-05-13 | 1998-03-24 | Motorola, Inc. | Methods and systems for biological reagent placement |
CA2419544A1 (en) * | 2000-08-14 | 2002-02-21 | Surface Logix, Inc. | Pathways arrays |
-
2004
- 2004-03-26 EP EP04758432A patent/EP1606629A2/en not_active Withdrawn
- 2004-03-26 US US10/550,826 patent/US20070249060A1/en not_active Abandoned
- 2004-03-26 JP JP2006509366A patent/JP2006521567A/en not_active Withdrawn
- 2004-03-26 CA CA002520191A patent/CA2520191A1/en not_active Abandoned
- 2004-03-26 WO PCT/US2004/009376 patent/WO2004088325A2/en active Application Filing
- 2004-03-26 AU AU2004225496A patent/AU2004225496A1/en not_active Abandoned
Patent Citations (2)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO2002006834A2 (en) * | 2000-07-19 | 2002-01-24 | Pointilliste, Inc. | Nested sorting and high throughput screening |
WO2004005918A2 (en) * | 2002-07-05 | 2004-01-15 | University Of Chicago | Characterization of biochips containing self-assembled monolayers with maldi-tof-ms |
Non-Patent Citations (4)
Title |
---|
FERNANDEZ F M ET AL: "Peptide sequencing using a patchwork approach and surface-induced dissociation in sector-TOF and dual quadrupole mass spectrometers", JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, ELSEVIER SCIENCE INC., NEW YORK, NY, US, vol. 14, no. 12, December 2003 (2003-12-01), pages 1387 - 1401, XP004476947, ISSN: 1044-0305 * |
NEDELKOV DOBRIN ET AL: "Design of buffer exchange surfaces and sensor chips for biosensor chip mass spectrometry", PROTEOMICS, vol. 2, no. 4, April 2002 (2002-04-01), pages 441 - 446, XP002313540, ISSN: 1615-9853 * |
SU JING ET AL: "Using mass spectrometry to characterize self-assembled monolayers presenting peptides, proteins, and carbohydrates.", ANGEWANDTE CHEMIE (INTERNATIONAL ED. IN ENGLISH) 16 DEC 2002, vol. 41, no. 24, 16 December 2002 (2002-12-16), pages 4715 - 4718, XP002313539, ISSN: 0570-0833 * |
TEMPLIN M F ET AL: "PROTEIN MICROARRAY TECHNOLOGY", DRUG DISCOVERY TODAY, ELSEVIER SCIENCE LTD, GB, vol. 7, no. 15, 1 August 2002 (2002-08-01), pages 815 - 822, XP001152984, ISSN: 1359-6446 * |
Also Published As
Publication number | Publication date |
---|---|
CA2520191A1 (en) | 2004-10-14 |
US20070249060A1 (en) | 2007-10-25 |
JP2006521567A (en) | 2006-09-21 |
EP1606629A2 (en) | 2005-12-21 |
AU2004225496A1 (en) | 2004-10-14 |
WO2004088325A2 (en) | 2004-10-14 |
Similar Documents
Publication | Publication Date | Title |
---|---|---|
WO2004088325A3 (en) | Determination of proteins and/or other molecules using mass spectroscopy | |
Pappireddi et al. | A review on quantitative multiplexed proteomics | |
Mirgorodskaya et al. | Quantitation of peptides and proteins by matrix‐assisted laser desorption/ionization mass spectrometry using 18O‐labeled internal standards | |
WO2004089972A3 (en) | Mass spectrometry data analysis techniques | |
WO2003042774A3 (en) | Mass intensity profiling system and uses thereof | |
WO2007067759A3 (en) | Methods and devices for concentration and fractionation of analytes for chemical analysis | |
Lee et al. | Immobilization of aminophenylboronic acid on magnetic beads for the direct determination of glycoproteins by matrix assisted laser desorption ionization mass spectrometry | |
WO2005123959A3 (en) | Multiplexing assays for analyte detection | |
Katayama et al. | Efficient in‐gel digestion procedure using 5‐cyclohexyl‐1‐pentyl‐β‐D‐Maltoside as an additive for gel‐based membrane proteomics | |
EP1830184A4 (en) | Substrate for maldi-tof ms and mass spectrometry method using the same | |
Mollah et al. | Targeted mass spectrometric strategy for global mapping of ubiquitination on proteins | |
US20070275478A1 (en) | Method and apparatus for processing of biological samples for mass spectrometry analysis | |
Romero‐Pastor et al. | Collagen‐based proteinaceous binder‐pigment interaction study under UV ageing conditions by MALDI‐TOF‐MS and principal component analysis | |
WO2005003394A3 (en) | Bio-barcode based detection of target analytes | |
WO2001094935A3 (en) | Labeling of proteomic samples during proteolysis for quantitation and sample multiplexing | |
Wang et al. | Matrix-assisted ionization vacuum for high-resolution Fourier transform ion cyclotron resonance mass spectrometers | |
WO2007060421A3 (en) | Mass spectrometer | |
WO2006138629A3 (en) | Method of classifying chemically crosslinked cellular samples using mass spectra | |
WO2004049385A8 (en) | Constellation mapping and uses thereof | |
Yao et al. | Rapid microorganism identification with on‐slide proteolytic digestion followed by matrix‐assisted laser desorption/ionization tandem mass spectrometry and database searching | |
Kuckova et al. | Characterization of proteins in cultural heritage using MALDI–TOF and LC–MS/MS mass spectrometric techniques | |
WO2006116893A3 (en) | Mass spectrometric analysis method | |
Flora et al. | Determination of the relative energies of activation for the dissociation of aromatic versus aliphatic phosphopeptides by ESI-FTICR-MS and IRMPD | |
WO2007060437A3 (en) | Mass spectrometer | |
WO2004109449A3 (en) | Analysis of data from a mass spectrometer |
Legal Events
Date | Code | Title | Description |
---|---|---|---|
AK | Designated states |
Kind code of ref document: A2 Designated state(s): AE AG AL AM AT AU AZ BA BB BG BR BW BY BZ CA CH CN CO CR CU CZ DE DK DM DZ EC EE EG ES FI GB GD GE GH GM HR HU ID IL IN IS JP KE KG KP KR KZ LC LK LR LS LT LU LV MA MD MG MK MN MW MX MZ NA NI NO NZ OM PG PH PL PT RO RU SC SD SE SG SK SL SY TJ TM TN TR TT TZ UA UG US UZ VC VN YU ZA ZM ZW |
|
AL | Designated countries for regional patents |
Kind code of ref document: A2 Designated state(s): BW GH GM KE LS MW MZ SD SL SZ TZ UG ZM ZW AM AZ BY KG KZ MD RU TJ TM AT BE BG CH CY CZ DE DK EE ES FI FR GB GR HU IE IT LU MC NL PL PT RO SE SI SK TR BF BJ CF CG CI CM GA GN GQ GW ML MR NE SN TD TG |
|
121 | Ep: the epo has been informed by wipo that ep was designated in this application | ||
WWE | Wipo information: entry into national phase |
Ref document number: 2520191 Country of ref document: CA |
|
WWE | Wipo information: entry into national phase |
Ref document number: 2006509366 Country of ref document: JP |
|
WWE | Wipo information: entry into national phase |
Ref document number: 2004758432 Country of ref document: EP Ref document number: 2004225496 Country of ref document: AU |
|
ENP | Entry into the national phase |
Ref document number: 2004225496 Country of ref document: AU Date of ref document: 20040326 Kind code of ref document: A |
|
WWP | Wipo information: published in national office |
Ref document number: 2004225496 Country of ref document: AU |
|
WWP | Wipo information: published in national office |
Ref document number: 2004758432 Country of ref document: EP |
|
WWE | Wipo information: entry into national phase |
Ref document number: 10550826 Country of ref document: US |
|
WWP | Wipo information: published in national office |
Ref document number: 10550826 Country of ref document: US |