WO2003058203A2 - Extended glucagon-like peptide-1 analogs - Google Patents

Extended glucagon-like peptide-1 analogs Download PDF

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Publication number
WO2003058203A2
WO2003058203A2 PCT/US2003/000001 US0300001W WO03058203A2 WO 2003058203 A2 WO2003058203 A2 WO 2003058203A2 US 0300001 W US0300001 W US 0300001W WO 03058203 A2 WO03058203 A2 WO 03058203A2
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Prior art keywords
xaa
glp
ser
gly
lys
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PCT/US2003/000001
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French (fr)
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WO2003058203A3 (en
Inventor
Wolfgang Glaesner
Wayne David Kohn
Rohn Lee Junior Millican
Lianshan Zhang
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Eli Lilly And Company
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Priority to BRPI0306706-8A priority Critical patent/BR0306706A/en
Priority to JP2003558463A priority patent/JP4282485B2/en
Priority to AU2003200839A priority patent/AU2003200839B2/en
Priority to EP03700026A priority patent/EP1585959A4/en
Priority to US10/499,111 priority patent/US7482321B2/en
Priority to CA002468700A priority patent/CA2468700A1/en
Priority to MXPA04006679A priority patent/MXPA04006679A/en
Publication of WO2003058203A2 publication Critical patent/WO2003058203A2/en
Publication of WO2003058203A3 publication Critical patent/WO2003058203A3/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/575Hormones
    • C07K14/605Glucagons
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P1/00Drugs for disorders of the alimentary tract or the digestive system
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P1/00Drugs for disorders of the alimentary tract or the digestive system
    • A61P1/18Drugs for disorders of the alimentary tract or the digestive system for pancreatic disorders, e.g. pancreatic enzymes
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P25/00Drugs for disorders of the nervous system
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P3/00Drugs for disorders of the metabolism
    • A61P3/04Anorexiants; Antiobesity agents
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P3/00Drugs for disorders of the metabolism
    • A61P3/08Drugs for disorders of the metabolism for glucose homeostasis
    • A61P3/10Drugs for disorders of the metabolism for glucose homeostasis for hyperglycaemia, e.g. antidiabetics
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P5/00Drugs for disorders of the endocrine system
    • A61P5/48Drugs for disorders of the endocrine system of the pancreatic hormones
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P9/00Drugs for disorders of the cardiovascular system
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P9/00Drugs for disorders of the cardiovascular system
    • A61P9/10Drugs for disorders of the cardiovascular system for treating ischaemic or atherosclerotic diseases, e.g. antianginal drugs, coronary vasodilators, drugs for myocardial infarction, retinopathy, cerebrovascula insufficiency, renal arteriosclerosis
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K38/00Medicinal preparations containing peptides
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K2319/00Fusion polypeptide

Definitions

  • GLP-1 glucagon-like pepide-1
  • NIDDM non- insulin dependent diabetes mellitus
  • GLP-1 induces numerous biological effects such as stimulating insulin secretion, inhibiting glucagon secretion, inhibiting gastric emptying, enhancing glucose utilization, and inducing weight loss.
  • GLP-1 may also act to prevent the pancreatic ⁇ cell deterioration that occurs as the disease progresses.
  • the most salient characteristic of GLP-1 is its ability to stimulate insulin secretion without the associated risk of hypoglycemia that is seen when using insulin therapy or some types of oral therapies that act by increasing insulin expression.
  • NIDDM As NIDDM progresses, it becomes extremely important to achieve near normal glycemic control and thereby minimize the complications associated with prolonged hyperglycemia .
  • GLP-1 would appear to be the drug of choice. However, the usefulness of therapy involving GLP-1 peptides has been limited by the fact that GLP-1 (1-37) is poorly active, and the two naturally occurring truncated peptides, GLP-1 (7-
  • DPP-IV dipeptidyl- peptidase IV
  • the present invention provides a different approach to the development of biologically active GLP-1 peptides that persist in the serum for extended periods.
  • the GLP-1 peptides of the present invention are analogs of GLP- 1(7-37) wherein various amino acids are added to the C- terminus of the analog.
  • These extended GLP-1 peptides not only have serum half-lives that are much longer than the native molecules but are particularly suited for oral and pulmonary administration due to their resistance to various proteolytic enzymes found in the stomach, intestine, and lungs. Further, many of these extended GLP-1 peptides are more potent than the native molecules. This increased potency coupled with resistance to various proteases facilitates the use of delivery technology associated with limited bioavailability .
  • the present invention makes possible non-injectable therapy which involves delivering cost-effective amounts of biologically active GLP-1 peptides such that therapeutic serum levels are achieved.
  • One embodiment of the present invention is a GLP-1 peptide comprising the amino acid sequence of formula 1 (SEQ ID NO: 1 (SEQ ID NO: 1)
  • Formula 1 (SEQ ID NO: 1) wherein: Xaa 7 is L-histidine, D-histidine, desamino-hi ⁇ tidine, 2 amino-histidine, ⁇ -hydroxy-histidine, homohistidine, ⁇ -fluoromethyl-histidine, or Dimethyl -histidine ;
  • Xaa is: Ala, Gly, Val, Leu, lie, Ser, or Thr;
  • Xaa 12 is Phe, Trp, or Tyr
  • Xaai ⁇ is Val, Trp, lie, Leu, Phe, or Tyr;
  • Xaais is Ser, Trp, Tyr, Phe, Lys, lie, Leu, Val;
  • Xaa 19 is Tyr, Trp, or Phe;
  • Xaa 20 is Leu, Phe, Tyr, or Trp ;
  • Xaa 22 is Gly, Glu, Asp, or Lys
  • Xaa 2 5 is Ala, Val, lie, or Leu,
  • Xaa 2 7 is Glu, lie, or Ala
  • Xaa 30 is Ala or Glu
  • Xaa 33 is Val or lie
  • Xaa 34 is Lys, Asp, Arg, or Glu
  • Xaa 36 is Gly, Pro, or Arg
  • Xaa 37 is Gly, Pro, or Ser
  • Xaa 38 is Ser, Pro, or His
  • Xaa 39 is Ser, Arg, Thr, Trp, or Lys ;
  • Xaa 40 is Ser or Gly
  • Xaa 4 ⁇ is Ala, Asp, Arg, Glu, Lys, or Gly;
  • Xaa 42 is: Pro, Ala, NH 2 , or is absent;
  • Xaa 43 is: Pro, Ala, NH 2 , or' is absent;
  • Xaa 44 is: Pro, Ala, Arg, Lys, His; NH 2 , or is absent;
  • Xaa 45 is: Ser, His, Pro, Lys, Arg, Gly, NH 2 or is absent;
  • Xaa 6 is: His, Ser, Arg, Lys, Pro, Gly, NH 2 or is absent; and
  • Xaa 47 is: His, Ser, Arg, Lys, NH 2 or is absent;
  • Xaa 48 is: Gly, His, NH 2 or is absent;
  • Xaa 49 is: Pro, His, NH 2 or is absent;
  • Xaa 50 is: Ser, His, Ser-NH 2 ,
  • Another embodiment of the present invention is a GLP-1 peptide comprising the amino acid sequence of formula 2 (SEQ ID NO: 2)
  • Xaa 7 is: L-histidine, D-histidine, desamino-histidine, 2- amino-histidine , ⁇ -hydroxy-histidine , homohistidine, ⁇ -f luoromethyl -histidine, or ⁇ - methyl -histidine ;
  • Xaa 8 is: Ala, Gly, Val, Leu, lie, Ser, or Thr;
  • Xaa i2 is: Phe, Trp, or Tyr;
  • Xaai ⁇ is: Val, Trp, lie, Leu, Phe, or Tyr;
  • Xaa 18 is: Ser, Trp, Tyr, Phe, Lys, lie, Leu, or Val;
  • Xaa ⁇ 9 is: Tyr, Trp, or Phe;
  • Xaa 20 is: Leu, Phe, Tyr, or Trp,
  • Xaa 22 is: Gly, Glu, Asp, or Lys,
  • Xaa 25 is: Ala, Val, lie, or Leu;
  • Xaa 27 is: Glu, lie, or Ala;
  • Xaa 30 is: Ala or Glu
  • Xaa 33 is: Val or lie
  • Xaa 34 is: Lys, Asp, Arg, or Glu;
  • Xaa 36 is: Gly, Pro, or Arg;
  • Xaa 37 is: Gly, Pro, or Ser
  • Xaa 38 is: Ser, Pro, or His
  • Xaa 39 is: Ser, Arg, Thr, Trp, or Lys;
  • Xaa 40 is: Ser or Gly
  • Xaa 41 is: Ala, Asp, Arg, Glu, Lys, or Gly;
  • Xaa 42 is: Pro, Ala, NH 2 , or is absent
  • Xaa 43 is: Pro, Ala, NH 2 , or is absent
  • Xaa 4 is: Pro, Ala, Arg, Lys, His, NH 2 , or is absent;
  • Xaa 45 is: Ser, His, Pro, Lys, Arg, NH 2 or is absent;
  • Xaa 6 is: His, Ser, Arg, Lys, NH 2 or is absent;
  • Xaa 47 is: His, Ser, Arg, Lys, NH 2 or is absent; provided that if Xaa 42 , Xaa 43 , Xaa 44 , Xaa 45 , Xaa 46 , or Xaa 47 is absent each amino acid downstream is absent and further provided that if Xaa 36 is Arg and Xaa 37 is Gly or Ser, the
  • GLP-1 peptide does not have the following C-terminal amino acid extension beginning at Xaa 38 : Ser-Ser-Gly-Ala-Pro-Pro- Pro-Ser-NH 2 .
  • Another embodiment of the present invention is an extended GLP-1 peptide comprising the amino acid sequence of formula 3 (SEQ ID NO: 3)
  • Xaa ⁇ is: Ala, Asp, Arg, Glu, Lys, or Gly;
  • Xaa 42 is: Pro or Ala;
  • Xaa 43 is: Pro or Ala;
  • Xaa 44 is: Pro, Ala, Arg, Lys, His, NH 2 , or is absent;
  • Xaa 45 is: Ser, His, Pro, Lys, Arg, NH 2 or is absent;
  • Xaa 46 is: His, Ser, Arg, Lys, NH 2 or is absent; and
  • Xaa 47 is: His, Ser, Arg, Lys, NH 2 or is absent; provided that if Xaa 4 , Xaa 45 , Xaa 46 , or Xaa 47 is absent each amino acid downstream is absent and further provided that if Xaa 36 is Arg and Xaa 37 is Gly or Ser, the GLP-1 peptide does not have the following C-terminal amino acid extension beginning at Xaa 38 : Ser-Ser-Gly-Ala-Pro-Pro-Pro-Ser-NH 2 .
  • Another embodiment of the present invention is an extended GLP-1 peptide comprising the amino acid sequence of formula 4 (
  • Xaa 7 is: L-histidine, D-histidine, desamino-histidine , 2- amino-histidine, ⁇ -hydroxy-histidine, homohistidine, ⁇ -f luoromethyl-histidine , or ⁇ - methyl -histidine;
  • Xaa 8 is: Gly, Val, Leu, lie, Ser, or Thr;
  • Xaa 22 is: Gly, Glu, Asp, or Lys;
  • Xaa 25 is: Ala, Val, lie, or Leu;
  • Xaa 33 is: Val or lie;
  • Xaa 38 is: Ser, Pro, or His;
  • Xaa 39 is: Ser, Arg, Thr, Trp, or Lys ;
  • Xaa 40 is: Ser or Gly;
  • Xaa i is: Ala, Asp, Arg, Glu, Lys, or Gly;
  • Xaa 2 is: Pro or Ala;
  • Xaa 43 is: Pro or Ala;
  • Xaa 44 is: Pro, Ala, Arg, Lys, His, NH 2 , or is absent;
  • Xaa 45 is: Ser, His, Pro, Lys, Arg, NH 2 or is absent;
  • Xaa 6 is: His, Ser, Arg, Lys, NH 2 or is absent; and
  • Xaa 47 is: His, Ser, Arg, Lys, His-NH 2 , Ser-NH 2 , Arg-NH 2 , His- NH 2 , NH 2/ or is absent; provided that if Xaa 4 , Xaa 45 , Xaa 46 , or Xaa 47 is absent each amino acid downstream is absent.
  • Another embodiment of the present invention is an extended GLP-1 peptide comprising an amino acid sequence of formula 5 (SEQ ID NO: 60)
  • Xaa 44 -Xaa 4 5 ⁇ Xa 45 — Xaa 47 -Xaa 8 ⁇ Xaa 9 -Xaa5o Formula 5 (SEQ ID NO: 60) Wherein: Xaa 38 is: Ser, Pro, or His; Xaa 39 is: Ser, Arg, Thr, Trp, or Lys ;
  • Xaa 0 is: Ser or Gly
  • Xaa 4X is: ' Ala, Asp, Arg, Glu, Lys; or Gly;
  • Xaa 2 is: Pro, Ala, NH 2 , or is absent
  • Xaa 43 is: Pro, Ala, NH 2 , or is absent
  • Xaa 4 is: Pro, Ala, Arg, Lys, His, NH 2 , or is absent;
  • Xaa 45 is: Ser, His, Pro, Lys, Arg, Gly, NH 2 or is absent;
  • Xaa 46 is: His, Ser, Arg, Lys, Pro, Gly, NH 2 or is absent;
  • Xaa 47 is: His, Ser, Arg, Lys, NH 2 or is absent
  • Xaa 48 is: Gly, His, NH 2 or is absent
  • Xaa 9 is: Pro, His, NH 2 or is absent;
  • Xaa 50 is: Ser, His, Ser-NH 2 , His-NH 2 or. is absent; wherein said GLP-1 peptide comprises from one to six further substitutions and provided that if Xaa 2 , Xaa 43 , Xaa 44 , Xaa 45 , Xaa 46 , Xaa 47/ Xaa 48 or Xaa 49 is absent each amino acid downstream is absent
  • formula 4 and formula 5 include GLP-1 peptides that have valine or glycine at position 8 and glutamic acid at position 22.
  • the present invention also encompasses a method of stimulating the GLP-1 receptor in a subject in need of such stimulation, said method comprising the step of administering to the subject an effective amount of the GLP- 1 peptides described herein.
  • Subjects in need of GLP-1 receptor stimulation include those with non- insulin dependent diabetes, stress-induced hyperglycemia, and obesity.
  • GLP-1 peptides of the present invention have various amino acid changes relative to the native GLP-1 molecules and have additional amino acids added to the C- terminus beginning at position 37.
  • Native GLP-1 (7-37) OH has the amino acid sequence of SEQ ID NO: 5:
  • the native molecule is also amidated in vivo such that the glycine residue at position 37 is replaced with an amide group.
  • the amino terminus of GLP-1 (7- 37) OH has been assigned residue number 7 and the carboxy- terminus, number 37.
  • the other amino acids in the polypeptide are numbered consecutively, as shown in SEQ ID NO: 4. For example, position 12 is phenylalanine and position 22 is glycine. The same numbering system is used for the extended GLP-1 peptides of the present invention.
  • the GLP-1 peptides encompassed by the present invention are "extended GLP-1 peptides.”
  • Extended GLP-1 peptides have various amino acid substitutions relative to the native GLP- 1(7-37) or GLP-1 (7-36) molecule and have additional amino acids extending from the C-terminus.
  • the extended GLP-1 peptides of the present invention have one or more changes selected from the following positions relative to GLP-1 (7-37): 7, 8, 12, 16, 18, 19, 20, 22, 25, 27, 30, 33, 34, 36, and 37.
  • these GLP- 1 peptides have at least 4 amino acids added after amino acid residue number 37 (Xaa 38 through Xaa 4i ) .
  • at least 6 amino acids are added to the C-terminus.
  • the present invention encompasses extended GLP-1 peptides comprising any combination of the amino acids provided in formula 1 (SEQ ID NO:l), formula 2 (SEQ ID NO:2) , formula 3 (SEQ ID NO:3), and formula 4 (SEQ ID NO:4) wherein these extended GLP-1 peptides exhibit "insulinotropic activity.”
  • Insulinotropic activity refers to the ability to stimulate insulin secretion in response to elevated glucose levels, thereby 'causing glucose uptake by cells and decreased plasma glucose . levels .
  • Insulinotropic activity can be assessed by methods known in the art, including using in vivo experiments and in vi tro assays that measure GLP-1 receptor binding activity or receptor activation, e.g., assays employing pancreatic islet cells or insulinoma cells, as described in EP 619,322 to Gelfand, et al . , and U.S. Patent No. 5,120,712, respectively.
  • Insulinotropic activity is routinely measured in humans by measuring insulin levels or C-peptide 'levels.
  • Extended GLP-1 peptides encompassed by the present invention have an in vi tro potency that is not less than 1/10 the in vi tro potency of the DPP-IV resistant GLP-1 analog known as Val 8 -GLP-1 (7- 37) OH. More preferably, the extended GLP-1 peptides of the present invention are as potent or more potent than Val 8 - GLP-1 (7-37) OH.
  • In vi tro potency is the measure of the ability of ' a peptide to activate the GLP-1 receptor in a cell-based assay. In vi tro potency is expressed as the
  • EC 50 which is the effective concentration of compound that results in 50% activity in a single dose-response experiment.
  • vi tro potency is determined using a fluorescence assay that employs HEK-293 Aurora CRE-BLAM cells that stably express the human GLP-1 receptor. These HEK-293 cells have stably integrated a DNA vector having a cAMP response element (CRE) driving expression of the ⁇ -lactamase (BLAM) gene.
  • CRE cAMP response element
  • BLAM ⁇ -lactamase
  • the ⁇ - lactamase CCF2/AM substrate that emits fluorescence when it is cleaved by ⁇ -lactamase can then be added to cells that have been exposed to a specific amount of GLP-1 agonist to provide a measure of GLP-1 agonist potency.
  • the assay is further described in Zlokarnik et al . (1998) Science 279:84-88 (See also Example 1) .
  • the EC 50 values for the compounds listed in example 1 were determined using the BLAM assay described above by generating a dose response curve using dilutions ranging from 0.00003 nanomolar to 30 nanomolar. Relative in vi tro potency values are established by running Val 8 -GLP-1 (7-37) OH as a control and assigning the control a reference value of 1.
  • the extended GLP-1 peptides of the present invention have the amino acid sequence of GLP-1 (7-37) modified so that one, two, three, four, five, or six amino acids differ from the amino acid in the corresponding position of GLP-1 (7-37) and in addition have at least 4, preferably 6, even moire preferably between 6 and 10 amino acids added to the C-terminus.
  • the GLP-1 peptides of the present invention comprise extended GLP-1 analogs wherein the backbone for such analogs or fragments contains an amino acid other than alanine at position 8 (position 8 analogs) .
  • the backbone may also include L-histidine, D-histidine, or modified forms of histidine such as desamino-histidine, 2-amino-histidine, ⁇ -hydroxy-histidine , homohistidine, ⁇ -fluoromethyl- histidine, or ⁇ -methyl-histidine at position 7.
  • these position 8 analogs contain one or more additional changes at positions 12, 16, 18, 19, 20, 22, 25, 27, 30, 33, 34, 36, and 37 compared to the corresponding amino acid of native GLP-1 (7-37) . It is more preferable that these position 8 analogs contain one or more additional changes at positions 16, 18, 22, '25 and 33 compared to the corresponding amino acid of native .GLP-1 (7-37) .
  • the amino acid at position 12 of an extended GLP-1 peptide is selected from the group consisting of tryptophan or tyrosine.
  • the amino acid at position 8 is substituted with glycine, valine, leu ⁇ ine, isoleucine, serine,, threonine, or methionine and more preferably valine or glycine. It is even more preferred that in addition to the substitutions at position 12 and 8, the amino acid at 1 position 22 is substituted with glutamic acid.
  • the amino acid at position 16 of an extended GLP-1 peptide is selected from the group consisting of tryptophan, isoleucine, leucine, phenylalanine , or tyrosine. It is preferred that the amino acid at position 16 is tryptophan.
  • the amino acid at position 8 is substituted with glycine, valine, leucine, isoleucine, serine, threonine, or methionine and more preferably valine or glycine. It is even more preferred that in addition to the substitutions at position 16 and 8, the amino acid at position 22 is substituted with glutamic acid. It is also preferred that in addition to the substitutions at positions 16 and 8, the amino acid at position 33 is substituted with isoluecine. It is also preferred that in addition to the substitutions at position 8, 16, and 22, the amino acid at position 36 is substituted with glycine and the amino acid at position 37 is substituted with proline
  • the amino acid at position 18 of an extended GLP-1 peptide is selected from the group consisting of tryptophan, tyrosine, phenylalanine , lysine, leucine, or isoleucine, preferably tryptophan, tyrosine, and isoleucine. It is more preferred that in addition to the substitution at position 18, the amino acid at position 8 is substituted with glycine, valine, leucine, isoleucine, serine, threonine, or methionine and more preferably valine or glycine. It is even more preferred that in addition to the substitutions at position 18 and 8, the amino acid at position 22 is substituted with glutamic acid.
  • the amino acid at position 33 is substituted with isoleucine. It is also preferred that in addition to the substitutions at position 8, 18, and 22, the amino acid at position 36 is substituted with glycine and the amino acid at position 37 is substituted with proline.
  • the amino acid at position 19 of an extended GLP-1 peptide is selected from the group consisting of tryptophan or phenylalanine, preferably tryptophan. It is more preferred that in addition to the substitution at position 19, the amino acid at position 8 is substituted with glycine, valine, leucine, isoleucine, serine, threonine, or methionine and more preferably valine or glycine. It is even more preferred that in addition to the substitutions at position 19 and 8, the amino acid at position 22 is substituted with glutamic acid. It is also preferred that in addition to the substitutions at position 8, 19, and 22, the amino acid at position 36 is substituted with glycine and the amino acid at position 37 is substituted with proline.
  • the amino acid at position 20 of an extended GLP-1 peptide is selected from the group consisting of phenylalanine, tyrosine, or tryptophan, preferably tryptophan. It is more preferred that in addition to the substitution at position 20, the amino acid at position 8 is substituted with glycine, valine, leucine, isoleucine, serine, threonine, or methionine and more preferably valine or glycine. It is even more preferred that in addition to the substitutions at position 20 and 8, the amino acid at position 22 is substituted with glutamic acid. It is also preferred that in addition to the substitutions at position 8, 20, and 22, the amino acid at position 36 is substituted with glycine and the amino acid at position 37 is, substituted with proline .
  • amino acid at position 25 of an extended GLP-1 peptide is selected from the group consisting of valine, isoleucine, and leucine, preferably valine. It is more preferred that in addition to the substitution at position 25, the amino acid at position 8 is substituted with glycine, valine, leucine, isoleucine, serine, threonine, or methionine and more preferably valine or glycine. It is even more preferred that in addition to the substitutions at position 25 and 8, the amino acid at position 22 is substituted with glutamic acid. It is also preferred that in addition to the substitutions at position 8, 22, and 25, the amino acid at position 36 is substituted with glycine and the amino acid at position 37 is substituted with proline.
  • the amino acid at position 27 of an extended GLP-1 peptide is selected from the group consisting of isoleucine or alanine. It is more preferred that in addition to the substitution at position 27, the amino acid at position 8 is substituted with glycine, valine, leucine, isoleucine, serine, threonine, or methionine and more preferably valine or glycine. It is even more preferred that in addition to the substitutions at position 27 and 8, the amino acid at position 22 is substituted with glutamic acid. It is also preferred that in addition to the substitutions at 1 position 8, 22, and 27, the amino acid at position 36 is substituted with glycine and the amino acid at position 37 is substituted with proline.
  • the amino acid at position 33 of an extended GLP-1 peptide is isoleucine. It is more preferred that in addition to the substitution at position 33, the amino acid at position 8 is substituted with glycine, valine, leucine, isoleucine, serine, threonine, or methionine and more preferably valine or glycine. It is even more preferred that in addition to the substitutions at position 33 and 8, the amino acid at position 22 is substituted with glutamic acid. It is also preferred that in addition to the substitutions at position 8, 22, and 33 the amino acid at position 36 is substituted with glycine and the amino acid at position 37 is substituted with proline.
  • the amino acid at position 34 is aspartic acid. It is more preferred that in addition to the substitution at position 34, the amino acid at position 8 is substituted with glycine, valine, leucine, isoleucine, serine, threonine, or methionine and more preferably valine or glycine. It is even more preferred that in addition to the substitutions at position 34 and 8, the amino acid at position 22 is substituted with glutamic acid. It is also preferred that in addition to the substitutions at position 8, 22, and 34 the amino acid at position 36 is substituted with glycine and the amino acid at position 37 is substituted with proline.
  • the C-terminal extension portion fused to the GLP-1 analog backbones discussed above is at least 4 amino acids in length, preferably between 6 and 10 amino acids in length.
  • the extended GLP-1 peptides of the present invention have a serine, proline, or histidine at position 38; a serine, arginine, threonine, tryptophan, or lysine at position 39; a serine or glycine at position 40; an alanine, aspartic acid, arginine, glutamic acid, lysine or glycine at position 41; a proline or alanine at position 42; and a proline or alanine at position 43.
  • Additional amino acids that may be added include a proline, serine, alanine, arginine, lysine, or histidine at position 44; a serine,' histidine, proline, lysine or arginine at position 45; a histidine, serine, arginine, or lysine at position 46; and a histidine, serine, arginine, or lysine at position 47.
  • histidine is the C-terminal amino acid at either position 42, 43, 44, 45, 46, or 47.
  • 'Additional amino acids that may be added to the C-terminus also include those specified in formula 1 (SEQ ID N0:1) .
  • Xaa 34 is aspartic acid
  • Xaa 4 ⁇ is arginine or lysine.
  • Xaa 39 is serine.
  • Xaa 41 is aspartic acid or arginine
  • Xaa 42 , Xaa 43 , and Xaa 4 are all proline.
  • the C-terminal amino acid may be in the typical acid form or may be amidated.
  • a preferred genus of extended GLP-1 peptides comprise the amino acid sequence of formula 4 (SEQ ID NO : 4 )
  • Formula 4 (SEQ ID NO : 4 ) wherein: Xaa 7 is: L-histidine, D-histidine, desamino-histidine, 2- a ino-histidine, ⁇ -hydroxy-histidine , homohistidine, ⁇ -fluoromethyl -histidine, or ⁇ - methyl-histidine ; Xaa 8 is: Gly, Val, Leu, lie, Ser, or Thr; Xaa 2 2 is: Gly, Glu, Asp, or Lys; Xaa 25 is: Ala, Val, lie, or Leu; Xaa 33 is: Val or lie; X
  • Xaa ⁇ is: Ala, Asp, Arg, Glu, Lys, or Gly;
  • Xaa 42 is: Pro or Ala;
  • Xaa 3 is: Pro or Ala;
  • Xaa 44 is: Pro, Ala, Arg, Lys, His, NH 2 , or is absent;
  • Xaa 5 is: Ser, His, Pro, Lys, Arg, NH 2 or is absent;
  • Xaa 46 is: His, Ser, Arg, Lys, NH 2 or is absent; and
  • Xaa 47 is: His, Ser, Arg, Lys, NH 2 or is absent; provided that if Xaa 44 , Xaa 5 , Xaa 46 , or Xaa 47 is absent each amino acid downstream is absent.
  • Preferred extended GLP-1 peptides are peptides of formula 4 (SEQ ID NO:4) wherein Xaa 7 is L-His, Xaa 8 is Gly or Val, Xaa 22 is Glu, Xaa 25 is Val, Xaa 33 is lie, Xaa 38 is Ser, Xaa 39 is Ser, Xaa 40 is Gly, Xaa 4i is Ala, Xaa 2 is Pro, Xaa 43 is Pro, Xaa 4 is Pro, Xaa 45 is Ser and Xaa 46 and Xaa 47 are absent and amidated forms of thereof .
  • Preferred extended GLP-1 peptides also include peptides of formula 4 (SEQ ID NO:4) wherein Xaa 7 is L-His, Xaa 8 is Val, Xaa 22 is Glu, Xaa 2 5 is Ala, Xaa 33 is lie, Xaa 38 is Ser, Xaa 39 is Ser, Xaa 40 is Gly, Xaa 41 is Ala, Xaa 2 is Pro, Xaa 43 is Pro, Xaa 4 is Pro, Xaa 5 is Ser and Xaa 46 and Xaa 47 are absent and amidated forms thereof.
  • SEQ ID NO:4 peptides of formula 4
  • peptides of formula 4 (SEQ ID NO:4) wherein Xaa 7 is L-His, Xaa 8 is Val, Xaa 22 is Gly, Xaa 25 is Ala, Xaa 33 is lie, Xaa 38 is Ser, Xaa 39 is Ser, Xaa 0 is Gly, Xaa 4X is Ala, Xaa 42 is Pro, Xaa 43 is Pro, Xaa 4 is Pro, Xaa 5 is Ser, and Xaa 46 and Xaa 47 are absent and amidated forms thereof.
  • SEQ ID NO:4 peptides of formula 4 (SEQ ID NO:4) wherein Xaa 7 is L-His, Xaa 8 is Val, Xaa 22 is Gly, Xaa 25 is Ala, Xaa 33 is lie, Xaa 38 is Ser, Xaa 39 is Ser, Xaa 0 is Gly, Xaa 4X is Ala,
  • the present invention encompasses the discovery that specific amino acids added to the C-terminus of a GLP-1 peptide provide specific structural features that protect the peptide from degradation by various proteases yet do not negatively impact the biological 'activity of the peptide. Further, many of the extended peptides disclosed herein are more potent than DPP-IV resistant GLP-1 analogs such as Val 8 -GLP-1 (7-37)OH.
  • Example 1 provides in vi tro potency data for a representative number of extended GLP-1 peptides.
  • the in vi tro potency of the tested extended GLP-1 peptides ranged from about the same as Val 8 -GLP-1 (7-37) OH to greater than 7- fold more potent than Val 8 -GLP-1 (7-37) OH.
  • example 5 illustrates that extended GLP-1 peptides are also more potent in vivo .
  • Example 2 provides a measure of protease insensitivity for a representative number of extended GLP-1 analogs.
  • the relative proteolytic stability was determined by exposing extended GLP-1 peptides and Val 8 -GLP-1 (7-37) OH to ⁇ - chymotrypsin and then plotting the progress of the enzymatic reaction as described in Example 2.
  • the extended GLP-1 peptides tested ranged from as stable as Val 8 -GLP-1 (7-37) OH to 5-fold more stable than Val 8 -GLP-1 (7-37) OH .
  • the extended GLP-1 peptides of the present invention also have an increased half-life in vivo as indicated in example 4.
  • the in vivo half -life of these extended peptides is generally longer than the half-life of DPP-IV protected GLP-1 analogs such as Val 8 -GLP-1 (7-37) OH .
  • the extended GLP-1 peptides of the present invention are suited for oral administration, nasal administration, pulmonary inhalation or parenteral administration.
  • Parenteral administration can include, for example, systemic administration, such as by intramuscular, intravenous, subcutaneous, or intraperitoneal injection.
  • the GLP-1 compounds can be administered to the subject in conjunction with an acceptable pharmaceutical carrier, diluent or excipient as part of a pharmaceutical composition for treating various diseases and conditions discussed herein.
  • the pharmaceutical composition can be a solution or a suspension.
  • Suitable pharmaceutical carriers may contain inert ingredients which do not interact with the peptide or peptide derivative. Standard pharmaceutical formulation techniques may be employed such as those described in Remington's Pharmaceutical Sciences, Mack Publishing Company, Easton, PA.
  • Suitable pharmaceutical carriers for parenteral administration include, for example, sterile water, physiological saline, bacteriostatic saline (saline containing about 0.9% mg/ml benzyl alcohol), phosphate- buffered saline, Hank's solution, Ringer ' s-lactate and the like.
  • suitable excipients include lactose, dextrose, sucrose, trehalose, sorbitol, and mannitol .
  • the GLP-1 compounds may be formulated for administration such that blood plasma levels are maintained in the efficacious range for extended time periods.
  • depot formulations wherein a bioadsorbable polymer is used to provide sustained release over time are also suitable for use in the present invention.
  • the main barrier to effective oral peptide drug delivery is poor bioavailability due to degradation of peptides by acids and enzymes, poor absorption through epithelial membranes, and transition of peptides to an insoluble form after exposure to the acidic pH environment in the digestive tract. This reduced bioavailability necessitates the use of GLP-1 compounds with increased potency, increased stability, or both.
  • Oral delivery systems for peptides such as those encompassed by the present invention are known in the art .
  • GLP-1 compounds can be encapsulated using microspheres or other carriers and then delivered orally.
  • the extended GLP-1 peptides described herein can be used to treat subjects with a wide variety of diseases and conditions.
  • the extended GLP-1 peptides encompassed by the present invention exert their biological effects by acting at a receptor referred to as the "GLP-1 receptor" (see Dillon,' J.S. et al . (1993), Endocrinology, 133: 1907-1910).
  • Subjects with diseases and/or conditions that respond favorably to GLP-1 receptor stimulation or to the administration of extended GLP-1 peptides can therefore be treated. These subjects are said tc "be in need of treatment with extended GLP-1 peptides" or "in need of GLP-1 receptor stimulation” .
  • subjects requiring prophylactic treatment with a GLP-1 peptide e.g., subjects at risk for developing non-insulin dependent diabetes (see WO 00/07617) .
  • Additional subjects include those with impaired glucose tolerance or impaired fasting glucose, subjects with a partial pancreatectomy, subjects having one or more parents with non- insulin dependent diabetes, subjects who have had gestational diabetes and subjects who have had acute or chronic pancreatitis and are at risk for developing non-insulin dependent diabetes.
  • the extended GLP-1 peptides of the present invention are also useful in treating subjects who are overweight. Particularly suited are those subjects whose body weight is about 25% above normal body weight for the subject's height and body build. Thus, the .extended GLP-1 peptides can also be used to treat obesity (see WO 98/19698 by Efendic) .
  • the extended GLP-1 peptides of the present invention can be used to normalize blood glucose levels, prevent pancreatic ⁇ -cell deterioration, induce ⁇ -cell proliferation, stimulate insulin gene transcription, up- regulate IDX-l/PDX-1 or other growth factors, improve ⁇ -cell function, activate dormant ⁇ -cells, differentiate cells into ⁇ -cells, stimulate ⁇ -cell replication, inhibit ⁇ -cell apoptosis, regulate body weight, and induce weight loss.
  • an “effective amount” of an extended GLP-1 peptide is the quantity which results in a desired therapeutic and/or prophylactic effect without causing unacceptable side- effects when administered to a subject in need of GLP-1 receptor stimulation.
  • a “desired therapeutic effect” includes one or more of the following: 1) an amelioration of the symptom (s) associated with the disease or condition; 2) a delay in the onset of symptoms associated with the disease or condition; 3) increased longevity compared with the absence of the treatment; and 4) greater quality of life compared with the absence of the treatment.
  • an "effective amount" of an extended GLP-1 peptide for the treatment of type 2 diabetes is the quantity that would result in greater control of blood glucose concentration than in the absence of treatment, thereby resulting in a delay in the onset of diabetic complications such as retinopathy, neuropathy or kidney disease.
  • An "effective amount” of an extended GLP-1 peptide for the prevention of diabetes is the quantity that would delay, compared with the absence of treatment, the onset of elevated blood glucose levels that require treatment with drugs such as sulfonylureas, thiazolidinediones, insulin and/or bisguanidines .
  • a typical dose range for the extended GLP-1 peptides of the present invention will range from about 1 ⁇ g to about 100 mg per day. Preferably, the dose range is about 5 ⁇ g to about 1 mg per day. Even more preferably the dose is about 10 ⁇ g to about 100 ⁇ g per day.
  • a "subject” is a mammal, preferably a human, but can also be an animal, e.g., companion animals (e.g., dogs, cats, and the like), farm animals (e.g., cows, sheep, pigs, horses, and the like) and laboratory animals (e.g., rats, mice, guinea pigs, and the like).
  • companion animals e.g., dogs, cats, and the like
  • farm animals e.g., cows, sheep, pigs, horses, and the like
  • laboratory animals e.g., rats, mice, guinea pigs, and the like.
  • the extended GLP-1 peptides of the present invention can be prepared using recombinant DNA technology or by using standard methods of solid-phase peptide synthesis techniques.
  • Peptide synthesizers are commercially available from, for example, Applied Biosystems in Foster City CA. Reagents for solid phase synthesis are commercially available, for example, from Midwest Biotech (Fishers, IN) .
  • Solid phase peptide synthesizers can be used according to manufacturers instructions for blocking interfering groups, protecting the amino acid to be reacted, coupling, decoupling, and capping of unreacted amino acids.
  • an -N-carbamoyl protected amino acid and the N-terminal amino acid on the growing peptide chain on a resin is coupled at room temperature in an inert solvent such as di ethylformamide, N-methylpyrrolidone or methylene chloride in the presence of coupling agents such as dicyclohexylcarbodiimide and 1-hydroxybenzotriazole and a base such as diisopropylethylamine .
  • the ⁇ -N-carbamoyl protecting group is removed from the resulting peptide resin using a reagent such as trifluoroacetic acid or piperidine, and the coupling reaction repeated with the next desired N- protected amino acid to be added to the peptide chain.
  • Suitable amine protecting groups are well known in the art and are described, for example, in Green and Wuts, "Protecting Groups in Organic Synthesis” , John Wiley and Sons, 1991, the entire teachings of which are incorporated by reference. Examples include t-butyloxycarbonyl (tBoc) and fluorenylmethoxycarbonyl (Fmoc) .
  • peptides are cleaved from , the solid-phase support with simultaneous side-chain deprotection using standard hydrogen fluoride or trifluoroacetic acid cleavage protocols. Crude peptides are then further purified using Reversed-Phase Chromatography on Vydac C18 columns employing linear water-acetonitrile gradients with all solvents containing 0.1% trifluoroacetic acid (TFA) . To remove acetonitrile, peptides are lyophilized from a solution containing 0.1 % TFA, acetonitrile and water. Purity can be verified by analytical reversed phase chromatography. Identity of peptides can be verified by mass spectrometry . Peptides can be solubilized in aqueous buffers at neutral pH.
  • HEK-293 Aurora CRE-BLAM cells expressing the human GLP- 1 receptor are seeded at 20,000 to 40,000 cells/well/100 ⁇ l into a 96 well black clear bottom plate. The day after seeding, the medium is replaced with plasma free medium. On the third day after seeding, 20 ⁇ l of plasma free medium containing different concentrations of GLP-1 agonist is added to each well to generate a dose response curve. Generally, fourteen dilutions containing from 3 nanomolar to 30 nanomolar GLP-1 compound were used to generate a dose response curve from which EC 50 values could be determined.
  • HVEGTFTSDVSSYLEEQAAKEFIAWLVKGRGSSGDPPPS-NH2 SEQ ID NO: 8
  • HVEGTFTSDVSSYLEGQAAKEFIA IKGGPSSGAPPPS SEQ ID NO: 27
  • HVEGTFTSDWSSYLEGQAAKEFIAWLIKGGPSSGAPPPSH SEQ ID NO: 29
  • HVEGTFTSDWSSY EGQAAKEFIAWLIKGGPHSSGAPPPS SEQ ID NO: 30
  • HVEGTFTSDWSSY EEQAAKEFIA LIKGRGSSGAPPPS SEQ ID NO: 36 HVEGTFTSDVSSY EEQAAKEFIAW IKGRGHSSGAPPPS SEQ ID NO: 37 HVEGTFTSDVSSYLEEQAAKEFIAWLVKGRGHSSGAPPPS SEQ ID NO: 38 HVEGTFTSDWSSYLEEQAAKEFIAW IKGGPHSSGAPPPSH SEQ ID NO: 39 HVEGTFTSDWSSYLEEQAAKEFIAW IKGGPSSGAPPPSH SEQ ID NO: 40 HVEGTFTSDVSWYLEGQAVKEFIA LIKGGPHSSGAPPPS SEQ ID NO: 41 HVEGTFTSDVSSYLEEQAVKEFIAWLIKGGPSSGAPPPS SEQ ID NO: 42 HVEGTFTSDVSSYLEEQAVKEFIAW IKGGPSSGAPPPSH SEQ ID NO: 43 HVEGTFTSDWSSYLEEQAVKEFIAWLIKGGPSSGAPPPS SEQ ID NO: 44 HVEGTFTSDWSS
  • Extended GLP-1 peptides were analyzed with respect to their potential to aggregate in solution.
  • peptides in solution were stirred at elevated temperature in a suitable buffer while recording turbidity at 350 nm as a function of time. Time to the onset of aggregation was measured to quantify the potential of a given GLP molecule to aggregate under these stressed conditions.
  • a GLP-1 peptide was first dissolved under alkaline conditions (pH 10.5) for 30 minutes to dissolve any pre- aggregated material. The solution was then adjusted to pH
  • the cuvette was cleaned between experiments with a caustic soap solution (e.g., Contrad-70) .
  • a caustic soap solution e.g., Contrad-70
  • the following extended GLP-1 peptides were tested and were stable in solution for at least 55 hours compared to Val 8 -GLP-1 (7- 37) OH which was stable for about 1 hour:
  • HVEGTFTSDVSSYLEEQAAKEFIAWLIKGGPSSGDPPPS-NH2 SEQ ID NO: 10
  • HVEGTFTSDVSSYLEEQAAKEFIAWLIDGGPSSGRPPPS-NH2 SEQ ID NO: 7
  • HVEGTFTSDVSSYLEEQAAKEFIA VKGRGSSGDPPPS-NH2 SEQ ID NO : 8
  • HVEGTFTSDWSSYLEGQAAKEFIA IKGGPSSGAPPPH SEQ ID NO: 26
  • HVEGTFTSDVSSY EGQAAKEFIA LIKGGPSSGAPPPS SEQ ID NO: 27
  • HVEGTFTSDWSSYLEEQAAKEFIA IKGGPHSSGAPPPSH SEQ ID NO: 39
  • HVEGTFTSDVSSY EEQAAKEFIA LVDGGPSSGRG SEQ ID NO: 54
  • HVEGTFTSDVSSYLEGQAAKEFIA LVKGRGSSGAPPPS SEQ ID NO: 31
  • SEQ ID NO: 36 Parameters were determined following a single intravenous dose of lO ⁇ g/kg in four different rats. Data are listed in Tables 1 and 2
  • Table 1 PK parameters for extended GLP-1 peptides following a single intravenous injection of 10 ⁇ g/kg to Sprague Dawley rats .
  • GLP-1 peptides were administered at 'a rate of 1 pmol/kg/min. For the final 60 minutes the infusion rate of each GLP-1 compound was increased to 3 pmol/kg/min. Blood samples were taken periodically for the determination of insulin and GLP- 1 peptide concentrations. Insulin change values were calculated as the difference between the value at time t and the average value during the last 20 minutes of the control period (60-80) minutes and are presented in Table 3. Areas under the insulin change curves were calculated using the trapezoidal rule over the last 30 minutes of each infusion period. GLP-1 peptide concentrations are presented in Table 4. Values listed are the means ⁇ standard error of the mean (SEM) .
  • Table 4 GLP-1 peptide concentration from dog hyperglycemic (150 mg/dL) clamp studies after 60 minutes of compound infusion.

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Abstract

The invention encompasses GLP-1 peptides with modifications at various positions coupled with an extended C-terminus that provides increased stability.

Description

EXTENDED GLUCAGON-LIKE PEPTIDE-1 ANALOGS
A large body of pre-clinical and clinical research data suggests that glucagon-like pepide-1 (GLP-1) shows great promise as a treatment for non- insulin dependent diabetes mellitus (NIDDM) especially when oral agents begin to fail. GLP-1 induces numerous biological effects such as stimulating insulin secretion, inhibiting glucagon secretion, inhibiting gastric emptying, enhancing glucose utilization, and inducing weight loss. Further, pre- clinical studies suggest that GLP-1 may also act to prevent the pancreatic β cell deterioration that occurs as the disease progresses. Perhaps the most salient characteristic of GLP-1 is its ability to stimulate insulin secretion without the associated risk of hypoglycemia that is seen when using insulin therapy or some types of oral therapies that act by increasing insulin expression.
As NIDDM progresses, it becomes extremely important to achieve near normal glycemic control and thereby minimize the complications associated with prolonged hyperglycemia .
GLP-1 would appear to be the drug of choice. However, the usefulness of therapy involving GLP-1 peptides has been limited by the fact that GLP-1 (1-37) is poorly active, and the two naturally occurring truncated peptides, GLP-1 (7-
37) OH and GLP-1 (7-36 ) NH2 , are rapidly cleared in vivo and have extremely short in vivo half-lives.
Further, GLP-1 peptides currently in development cannot be given orally and, like insulin, must be injected. Thus, despite the clear medical advantages associated with therapy involving GLP-1, the short half -life which results in a drug that must be injected one or more times a day has impeded commercial development efforts. It is known that endogenously produced dipeptidyl- peptidase IV (DPP-IV) inactivates circulating GLP-1 peptides by removing the N-terminal histidine and alanine residues and is a major reason for the short in vivo half -life. Thus, recent efforts have focused on the development of GLP- 1 peptides that are resistant to DPP-IV degradation. Some of these resistant peptides have modifications at the N- terminus (See U.S. Patent No. 5,705,483), and some are derivatized GLP-1 peptides wherein large acyl groups that prevent DPPrlV from accessing the N-terminus of the peptide are attached to various amino acids (See WO 98/08871) .
The present invention, however, provides a different approach to the development of biologically active GLP-1 peptides that persist in the serum for extended periods. The GLP-1 peptides of the present invention are analogs of GLP- 1(7-37) wherein various amino acids are added to the C- terminus of the analog. These extended GLP-1 peptides not only have serum half-lives that are much longer than the native molecules but are particularly suited for oral and pulmonary administration due to their resistance to various proteolytic enzymes found in the stomach, intestine, and lungs. Further, many of these extended GLP-1 peptides are more potent than the native molecules. This increased potency coupled with resistance to various proteases facilitates the use of delivery technology associated with limited bioavailability . Thus, the present invention makes possible non-injectable therapy which involves delivering cost-effective amounts of biologically active GLP-1 peptides such that therapeutic serum levels are achieved.
It has now been found that a number of GLP-1 peptides with modifications at various positions coupled with an extended C-terminus show increased stability compared to some DPP-IV resistant GLP-1 molecules such as Val8-GLP-1 (7- 37) OH. Many of these extended GLP-1 peptides are more potent as well.
One embodiment of the present invention is a GLP-1 peptide comprising the amino acid sequence of formula 1 (SEQ
ID NO:l)
Xaa7-Xaa8-Glu-Gly-Thr-Xaa12-Thr-Ser-Asp-Xaaι6-Ser- Xaaι8-Xaa19-Xaa2o-Glu-Xaa22-Gln-Ala-Xaa25-Lys-Xaa27- Phe-Ile-Xaa3o-Trp-Leu-Xaa33-Xaa34-Gly-Xaa36-Xaa37- Xaa38 _Xaa39 -Xaa o -Xaa4ι -Xaa 2-Xaa43 ~Xaa 4 -Xaa45 -Xaa46 - Xaa47-X 48 -Xaa g_Xaa5o
Formula 1 (SEQ ID NO: 1) wherein: Xaa7 is L-histidine, D-histidine, desamino-hiεtidine, 2 amino-histidine, β-hydroxy-histidine, homohistidine, α-fluoromethyl-histidine, or Dimethyl -histidine ;
Xaa, is: Ala, Gly, Val, Leu, lie, Ser, or Thr;
Xaa12 is Phe, Trp, or Tyr;
Xaaiβ is Val, Trp, lie, Leu, Phe, or Tyr;
Xaais is Ser, Trp, Tyr, Phe, Lys, lie, Leu, Val;
Xaa19 is Tyr, Trp, or Phe;
Xaa20 is Leu, Phe, Tyr, or Trp;
Xaa22 is Gly, Glu, Asp, or Lys
Xaa25 is Ala, Val, lie, or Leu,
Xaa27 is Glu, lie, or Ala;
Xaa30 is Ala or Glu;
Xaa33 is Val or lie;
Xaa34 is Lys, Asp, Arg, or Glu;
Xaa36 is Gly, Pro, or Arg;
Xaa37 is Gly, Pro, or Ser;
Xaa38 is Ser, Pro, or His;
Xaa39 is Ser, Arg, Thr, Trp, or Lys ;
Xaa40 is Ser or Gly;
Xaa4ι is Ala, Asp, Arg, Glu, Lys, or Gly; Xaa42 is: Pro, Ala, NH2, or is absent; Xaa43 is: Pro, Ala, NH2, or' is absent; Xaa44 is: Pro, Ala, Arg, Lys, His; NH2, or is absent; Xaa45 is: Ser, His, Pro, Lys, Arg, Gly, NH2 or is absent; Xaa6 is: His, Ser, Arg, Lys, Pro, Gly, NH2 or is absent; and Xaa47 is: His, Ser, Arg, Lys, NH2 or is absent; Xaa48 is: Gly, His, NH2 or is absent; Xaa49 is: Pro, His, NH2 or is absent; and Xaa50 is: Ser, His, Ser-NH2, His-NH2 or is absent; provided that if Xaa2, Xaa43, Xaa4 , Xaa45, Xaa46, Xaa47, Xaa48, or Xaa49 is absent each amino acid downstream is absent and further provided that the if Xaa36 is Arg and Xaa37 is Gly or Ser, the GLP-1 peptide does not have1 the following C- terminal amino acid extension beginning at Xaa38 : Ser-Ser- Gly-Ala-Pro-Pro-Pro-Ser-NH2.
Another embodiment of the present invention is a GLP-1 peptide comprising the amino acid sequence of formula 2 (SEQ ID NO: 2)
Xaa7-Xaa8-Glu-Gly-Thr-Xaaι2-Thr-Ser-Asp-Xaaι6-Ser- Xaai8 -Xaaι9-Xaa2o- Glu- Xaa22- Gin -Ala- Xaa25- Lys- Xaa27 -
Phe-Ile-Xaa3o-Trp-Leu-Xaa33-Xaa34-Gly-Xaa36-Xaa37- Xaa3β -Xaa39 -Xaa o -Xaa4ι -Xaa42 _X a43 -Xaa -Xaa 5-Xaa g - Xaa47
Formula 2 (SEQ ID NO: 2) wherein:
Xaa7 is: L-histidine, D-histidine, desamino-histidine, 2- amino-histidine , β-hydroxy-histidine , homohistidine, α-f luoromethyl -histidine, or α- methyl -histidine ; Xaa8 is: Ala, Gly, Val, Leu, lie, Ser, or Thr; Xaai2 is: Phe, Trp, or Tyr;
Xaaiβ is: Val, Trp, lie, Leu, Phe, or Tyr; Xaa18 is: Ser, Trp, Tyr, Phe, Lys, lie, Leu, or Val; Xaaι9 is: Tyr, Trp, or Phe; Xaa20 is: Leu, Phe, Tyr, or Trp,
Xaa22 is: Gly, Glu, Asp, or Lys,
Xaa25 is: Ala, Val, lie, or Leu;
Xaa27 is: Glu, lie, or Ala; Xaa30 is: Ala or Glu
Xaa33 is: Val or lie;
Xaa34 is: Lys, Asp, Arg, or Glu;
Xaa36 is: Gly, Pro, or Arg;
Xaa37 is: Gly, Pro, or Ser, Xaa38 is: Ser, Pro, or His,
Xaa39 is: Ser, Arg, Thr, Trp, or Lys;
Xaa40 is: Ser or Gly;
Xaa41 is: Ala, Asp, Arg, Glu, Lys, or Gly;
Xaa42 is: Pro, Ala, NH2, or is absent; Xaa43 is: Pro, Ala, NH2, or is absent;
Xaa 4 is: Pro, Ala, Arg, Lys, His, NH2, or is absent;
Xaa45 is: Ser, His, Pro, Lys, Arg, NH2 or is absent;
Xaa 6 is: His, Ser, Arg, Lys, NH2 or is absent; and
Xaa47 is: His, Ser, Arg, Lys, NH2 or is absent; provided that if Xaa42, Xaa43, Xaa44, Xaa45, Xaa46, or Xaa47 is absent each amino acid downstream is absent and further provided that if Xaa36 is Arg and Xaa37 is Gly or Ser, the
GLP-1 peptide does not have the following C-terminal amino acid extension beginning at Xaa38: Ser-Ser-Gly-Ala-Pro-Pro- Pro-Ser-NH2.
Another embodiment of the present invention is an extended GLP-1 peptide comprising the amino acid sequence of formula 3 (SEQ ID NO: 3)
Xaa7-Xaa8-Glu-Gly-Thr-Phe-Thr-Ser-Asp-Xaaι6-Ser-Ser- Tyr-Lys-Glu-Xaa22-Gln-Ala-Xaa25-Lys-Glu-Phe-Ile-Ala-
Trp-Leu-Xaa33-Xaa34-Gly-Xaa36-Xaa37-Xaa38-Xaa39-Xaa4o- Xaa4χ -Xaa42 -Xaa 3 -Xaa4 -Xaa45~Xaa g-Xaa4 Formula 3 (SEQ ID NO: 3) wherein: Xaa7 is: L-histidine, D-histidine, desamino-histidine, 2- amino-histidine, β-hydroxy-histidine , homohistidine, α-fluoromethyl-histidine, or α- methyl -histidine; Xaa8 is: Gly, Val, Leu, lie, Ser, or Thr; Xaaχ6l is: Val, Trp, lie, Leu, Phe, or Tyr; Xaa22 is: Gly, Glu, Asp, or Lys; Xaa25 is: Ala, Val, lie, or Leu; Xaa33 is: Val or lie; Xaa34 is: Ly's , Asp, Arg, or Glu; Xaa36 is: Gly, Pro, or Arg; Xaa37 is: Gly, Pro, or Ser; Xaa38 is: Ser, Pro, or His, Xaa39 is: Ser, Arg, Thr, Trp, or Lys; Xaa40 is: Ser or Gly;
Xaaι is: Ala, Asp, Arg, Glu, Lys, or Gly; Xaa42 is: Pro or Ala; Xaa43 is: Pro or Ala;
Xaa44 is: Pro, Ala, Arg, Lys, His, NH2, or is absent; Xaa45 is: Ser, His, Pro, Lys, Arg, NH2 or is absent; Xaa46 is: His, Ser, Arg, Lys, NH2 or is absent; and Xaa47 is: His, Ser, Arg, Lys, NH2 or is absent; provided that if Xaa4 , Xaa45, Xaa46, or Xaa47 is absent each amino acid downstream is absent and further provided that if Xaa36 is Arg and Xaa37 is Gly or Ser, the GLP-1 peptide does not have the following C-terminal amino acid extension beginning at Xaa38 : Ser-Ser-Gly-Ala-Pro-Pro-Pro-Ser-NH2. Another embodiment of the present invention is an extended GLP-1 peptide comprising the amino acid sequence of formula 4 (SEQ ID NO: 4)
Xaa7-Xaa8-Glu-Gly-Thr-Phe-Thr-Ser-Asp-Val-Ser-Ser- Tyr-Lys-Glu-Xaa22-Gln-Ala-Xaa25-Lys-Glu-Phe-Ile-Ala- Trp-Leu-Xaa33-Lys-Gly-Gly-Pro-Xaa38-Xaa39-Xaa4o-Xaa41- Xaa4 -Xaa43-Xaa4 -Xaa45-Xaag-Xaa47 Formula 4 (SEQ ID NO : 4 ) wherein :
Xaa7 is: L-histidine, D-histidine, desamino-histidine , 2- amino-histidine, β-hydroxy-histidine, homohistidine, α-f luoromethyl-histidine , or α- methyl -histidine; Xaa8 is: Gly, Val, Leu, lie, Ser, or Thr; Xaa22 is: Gly, Glu, Asp, or Lys; Xaa25 is: Ala, Val, lie, or Leu; Xaa33 is: Val or lie;
Xaa38 is: Ser, Pro, or His; Xaa39 is: Ser, Arg, Thr, Trp, or Lys ; Xaa40 is: Ser or Gly;
Xaa i is: Ala, Asp, Arg, Glu, Lys, or Gly; Xaa 2 is: Pro or Ala; Xaa43 is: Pro or Ala;
Xaa44 is: Pro, Ala, Arg, Lys, His, NH2, or is absent; Xaa45 is: Ser, His, Pro, Lys, Arg, NH2 or is absent; Xaa 6 is: His, Ser, Arg, Lys, NH2 or is absent; and Xaa47 is: His, Ser, Arg, Lys, His-NH2, Ser-NH2, Arg-NH2, His- NH2, NH2/ or is absent; provided that if Xaa 4, Xaa45, Xaa46, or Xaa47 is absent each amino acid downstream is absent.
Another embodiment of the present invention is an extended GLP-1 peptide comprising an amino acid sequence of formula 5 (SEQ ID NO: 60)
His-Ala-Glu-Gly-Thr-Phe-Thr-Ser-Asp-Val-Ser-Ser-Tyr- Leu-Glu-Gly-Gln-Ala-Ala-Lys-Glu-Phe-Ile-Ala-Trp-Leu- Val-Lys-Gly-Gly-Pro-Xaa38-Xaa39-Xaa o-Xaa4ι-Xaa 2-Xaa43-
Xaa44-Xaa45~Xa 45 — Xaa47-Xaa 8~Xaa 9-Xaa5o Formula 5 (SEQ ID NO: 60) Wherein: Xaa38 is: Ser, Pro, or His; Xaa39 is: Ser, Arg, Thr, Trp, or Lys ;
Xaa0 is: Ser or Gly;
Xaa4X is:' Ala, Asp, Arg, Glu, Lys; or Gly;
Xaa2 is: Pro, Ala, NH2, or is absent; Xaa43 is: Pro, Ala, NH2 , or is absent;
Xaa4 is: Pro, Ala, Arg, Lys, His, NH2 , or is absent;
Xaa45 is: Ser, His, Pro, Lys, Arg, Gly, NH2 or is absent;
Xaa46 is: His, Ser, Arg, Lys, Pro, Gly, NH2 or is absent; and
Xaa47 is: His, Ser, Arg, Lys, NH2 or is absent; Xaa48 is: Gly, His, NH2 or is absent;,
Xaa9 is: Pro, His, NH2 or is absent; and
Xaa50 is: Ser, His, Ser-NH2, His-NH2 or. is absent; wherein said GLP-1 peptide comprises from one to six further substitutions and provided that if Xaa2, Xaa43, Xaa44 , Xaa45, Xaa46, Xaa47/ Xaa48 or Xaa49 is absent each amino acid downstream is absent
Additional embodiments of formula 1, formula 2, formula
3, formula 4, and formula 5 include GLP-1 peptides that have valine or glycine at position 8 and glutamic acid at position 22.
The present invention also encompasses a method of stimulating the GLP-1 receptor in a subject in need of such stimulation, said method comprising the step of administering to the subject an effective amount of the GLP- 1 peptides described herein. Subjects in need of GLP-1 receptor stimulation include those with non- insulin dependent diabetes, stress-induced hyperglycemia, and obesity.
The GLP-1 peptides of the present invention have various amino acid changes relative to the native GLP-1 molecules and have additional amino acids added to the C- terminus beginning at position 37. Native GLP-1 (7-37) OH has the amino acid sequence of SEQ ID NO: 5:
7His-Ala-Glu-10Gly-Thr-Phe-Thr-Ser-15Asp-Val-Ser-Ser- Tyr-20Leu-Glu-Gly-Gln-Ala-25Ala-Lys-Glu-Phe-Ile-30Ala- Trp-Leu-Val-Lys-35Gly-Arg-37Gly (SEQ ID NO: 5)
The native molecule is also amidated in vivo such that the glycine residue at position 37 is replaced with an amide group. By custom in the art, the amino terminus of GLP-1 (7- 37) OH has been assigned residue number 7 and the carboxy- terminus, number 37. The other amino acids in the polypeptide are numbered consecutively, as shown in SEQ ID NO: 4. For example, position 12 is phenylalanine and position 22 is glycine. The same numbering system is used for the extended GLP-1 peptides of the present invention. The GLP-1 peptides encompassed by the present invention are "extended GLP-1 peptides." Extended GLP-1 peptides have various amino acid substitutions relative to the native GLP- 1(7-37) or GLP-1 (7-36) molecule and have additional amino acids extending from the C-terminus. The extended GLP-1 peptides of the present invention have one or more changes selected from the following positions relative to GLP-1 (7-37): 7, 8, 12, 16, 18, 19, 20, 22, 25, 27, 30, 33, 34, 36, and 37. In addition, these GLP- 1 peptides have at least 4 amino acids added after amino acid residue number 37 (Xaa38 through Xaa4i) . Preferably, at least 6 amino acids are added to the C-terminus. Most preferably between 6 and 10 amino acids are added to the C- terminus. Even more preferably, between 7 and 9 amino acids are added to the C-terminus. The present invention encompasses extended GLP-1 peptides comprising any combination of the amino acids provided in formula 1 (SEQ ID NO:l), formula 2 (SEQ ID NO:2) , formula 3 (SEQ ID NO:3), and formula 4 (SEQ ID NO:4) wherein these extended GLP-1 peptides exhibit "insulinotropic activity." Insulinotropic activity refers to the ability to stimulate insulin secretion in response to elevated glucose levels, thereby 'causing glucose uptake by cells and decreased plasma glucose . levels . Insulinotropic activity can be assessed by methods known in the art, including using in vivo experiments and in vi tro assays that measure GLP-1 receptor binding activity or receptor activation, e.g., assays employing pancreatic islet cells or insulinoma cells, as described in EP 619,322 to Gelfand, et al . , and U.S. Patent No. 5,120,712, respectively.
Insulinotropic activity is routinely measured in humans by measuring insulin levels or C-peptide 'levels.
For the purposes of the present1 invention an in vi tro GLP-1 receptor signaling assay is used to determine whether a particular extended GLP-1 peptide will exhibit insulinotropic activity in vivo . Extended GLP-1 peptides encompassed by the present invention have an in vi tro potency that is not less than 1/10 the in vi tro potency of the DPP-IV resistant GLP-1 analog known as Val8-GLP-1 (7- 37) OH. More preferably, the extended GLP-1 peptides of the present invention are as potent or more potent than Val8- GLP-1 (7-37) OH.
" In vi tro potency" as used herein is the measure of the ability of ' a peptide to activate the GLP-1 receptor in a cell-based assay. In vi tro potency is expressed as the
"EC50" which is the effective concentration of compound that results in 50% activity in a single dose-response experiment. For the purposes of the present invention, in vi tro potency is determined using a fluorescence assay that employs HEK-293 Aurora CRE-BLAM cells that stably express the human GLP-1 receptor. These HEK-293 cells have stably integrated a DNA vector having a cAMP response element (CRE) driving expression of the β-lactamase (BLAM) gene. The interaction of a GLP-1 agonist with the receptor initiates a signal that results in activation of the cAMP response element and subsequent expression of β-lactamase. The β- lactamase CCF2/AM substrate that emits fluorescence when it is cleaved by β-lactamase (Aurora Biosciences Corp.) can then be added to cells that have been exposed to a specific amount of GLP-1 agonist to provide a measure of GLP-1 agonist potency. The assay is further described in Zlokarnik et al . (1998) Science 279:84-88 (See also Example 1) . 'The EC50 values for the compounds listed in example 1 were determined using the BLAM assay described above by generating a dose response curve using dilutions ranging from 0.00003 nanomolar to 30 nanomolar. Relative in vi tro potency values are established by running Val8-GLP-1 (7-37) OH as a control and assigning the control a reference value of 1.
Preferably, the extended GLP-1 peptides of the present invention have the amino acid sequence of GLP-1 (7-37) modified so that one, two, three, four, five, or six amino acids differ from the amino acid in the corresponding position of GLP-1 (7-37) and in addition have at least 4, preferably 6, even moire preferably between 6 and 10 amino acids added to the C-terminus.
Preferably, the GLP-1 peptides of the present invention comprise extended GLP-1 analogs wherein the backbone for such analogs or fragments contains an amino acid other than alanine at position 8 (position 8 analogs) . The backbone may also include L-histidine, D-histidine, or modified forms of histidine such as desamino-histidine, 2-amino-histidine, β-hydroxy-histidine , homohistidine, α-fluoromethyl- histidine, or α-methyl-histidine at position 7. It is preferable that these position 8 analogs contain one or more additional changes at positions 12, 16, 18, 19, 20, 22, 25, 27, 30, 33, 34, 36, and 37 compared to the corresponding amino acid of native GLP-1 (7-37) . It is more preferable that these position 8 analogs contain one or more additional changes at positions 16, 18, 22, '25 and 33 compared to the corresponding amino acid of native .GLP-1 (7-37) . In a preferred embodiment, the amino acid at position 12 of an extended GLP-1 peptide is selected from the group consisting of tryptophan or tyrosine. It is more preferred that in addition to the substitution at position 12, the amino acid at position 8 is substituted with glycine, valine, leuςine, isoleucine, serine,, threonine, or methionine and more preferably valine or glycine. It is even more preferred that in addition to the substitutions at position 12 and 8, the amino acid at1 position 22 is substituted with glutamic acid. In another preferred embodiment, the amino acid at position 16 of an extended GLP-1 peptide is selected from the group consisting of tryptophan, isoleucine, leucine, phenylalanine , or tyrosine. It is preferred that the amino acid at position 16 is tryptophan. It is more preferred that in addition to the substitutions at position 16, the amino acid at position 8 is substituted with glycine, valine, leucine, isoleucine, serine, threonine, or methionine and more preferably valine or glycine. It is even more preferred that in addition to the substitutions at position 16 and 8, the amino acid at position 22 is substituted with glutamic acid. It is also preferred that in addition to the substitutions at positions 16 and 8, the amino acid at position 33 is substituted with isoluecine. It is also preferred that in addition to the substitutions at position 8, 16, and 22, the amino acid at position 36 is substituted with glycine and the amino acid at position 37 is substituted with proline
In another preferred embodiment, the amino acid at position 18 of an extended GLP-1 peptide is selected from the group consisting of tryptophan, tyrosine, phenylalanine , lysine, leucine, or isoleucine, preferably tryptophan, tyrosine, and isoleucine. It is more preferred that in addition to the substitution at position 18, the amino acid at position 8 is substituted with glycine, valine, leucine, isoleucine, serine, threonine, or methionine and more preferably valine or glycine. It is even more preferred that in addition to the substitutions at position 18 and 8, the amino acid at position 22 is substituted with glutamic acid. It is also preferred that in addition to the substitutions at positions 18 and 8, the amino acid at position 33 is substituted with isoleucine. It is also preferred that in addition to the substitutions at position 8, 18, and 22, the amino acid at position 36 is substituted with glycine and the amino acid at position 37 is substituted with proline.
In another preferred embodiment, the amino acid at position 19 of an extended GLP-1 peptide is selected from the group consisting of tryptophan or phenylalanine, preferably tryptophan. It is more preferred that in addition to the substitution at position 19, the amino acid at position 8 is substituted with glycine, valine, leucine, isoleucine, serine, threonine, or methionine and more preferably valine or glycine. It is even more preferred that in addition to the substitutions at position 19 and 8, the amino acid at position 22 is substituted with glutamic acid. It is also preferred that in addition to the substitutions at position 8, 19, and 22, the amino acid at position 36 is substituted with glycine and the amino acid at position 37 is substituted with proline.
In another preferred embodiment, the amino acid at position 20 of an extended GLP-1 peptide is selected from the group consisting of phenylalanine, tyrosine, or tryptophan, preferably tryptophan. It is more preferred that in addition to the substitution at position 20, the amino acid at position 8 is substituted with glycine, valine, leucine, isoleucine, serine, threonine, or methionine and more preferably valine or glycine. It is even more preferred that in addition to the substitutions at position 20 and 8, the amino acid at position 22 is substituted with glutamic acid. It is also preferred that in addition to the substitutions at position 8, 20, and 22, the amino acid at position 36 is substituted with glycine and the amino acid at position 37 is, substituted with proline .
In another preferred embodiment, ithe amino acid at position 25 of an extended GLP-1 peptide is selected from the group consisting of valine, isoleucine, and leucine, preferably valine. It is more preferred that in addition to the substitution at position 25, the amino acid at position 8 is substituted with glycine, valine, leucine, isoleucine, serine, threonine, or methionine and more preferably valine or glycine. It is even more preferred that in addition to the substitutions at position 25 and 8, the amino acid at position 22 is substituted with glutamic acid. It is also preferred that in addition to the substitutions at position 8, 22, and 25, the amino acid at position 36 is substituted with glycine and the amino acid at position 37 is substituted with proline.
In another preferred embodiment, the amino acid at position 27 of an extended GLP-1 peptide is selected from the group consisting of isoleucine or alanine. It is more preferred that in addition to the substitution at position 27, the amino acid at position 8 is substituted with glycine, valine, leucine, isoleucine, serine, threonine, or methionine and more preferably valine or glycine. It is even more preferred that in addition to the substitutions at position 27 and 8, the amino acid at position 22 is substituted with glutamic acid. It is also preferred that in addition to the substitutions at1 position 8, 22, and 27, the amino acid at position 36 is substituted with glycine and the amino acid at position 37 is substituted with proline.
In another preferred embodiment, the amino acid at position 33 of an extended GLP-1 peptide is isoleucine. It is more preferred that in addition to the substitution at position 33, the amino acid at position 8 is substituted with glycine, valine, leucine, isoleucine, serine, threonine, or methionine and more preferably valine or glycine. It is even more preferred that in addition to the substitutions at position 33 and 8, the amino acid at position 22 is substituted with glutamic acid. It is also preferred that in addition to the substitutions at position 8, 22, and 33 the amino acid at position 36 is substituted with glycine and the amino acid at position 37 is substituted with proline.
In another preferred embodiment, the amino acid at position 34 is aspartic acid. It is more preferred that in addition to the substitution at position 34, the amino acid at position 8 is substituted with glycine, valine, leucine, isoleucine, serine, threonine, or methionine and more preferably valine or glycine. It is even more preferred that in addition to the substitutions at position 34 and 8, the amino acid at position 22 is substituted with glutamic acid. It is also preferred that in addition to the substitutions at position 8, 22, and 34 the amino acid at position 36 is substituted with glycine and the amino acid at position 37 is substituted with proline.
The C-terminal extension portion fused to the GLP-1 analog backbones discussed above is at least 4 amino acids in length, preferably between 6 and 10 amino acids in length. Preferably, the extended GLP-1 peptides of the present invention have a serine, proline, or histidine at position 38; a serine, arginine, threonine, tryptophan, or lysine at position 39; a serine or glycine at position 40; an alanine, aspartic acid, arginine, glutamic acid, lysine or glycine at position 41; a proline or alanine at position 42; and a proline or alanine at position 43. Additional amino acids that may be added include a proline, serine, alanine, arginine, lysine, or histidine at position 44; a serine,' histidine, proline, lysine or arginine at position 45; a histidine, serine, arginine, or lysine at position 46; and a histidine, serine, arginine, or lysine at position 47. Preferably, histidine is the C-terminal amino acid at either position 42, 43, 44, 45, 46, or 47. 'Additional amino acids that may be added to the C-terminus also include those specified in formula 1 (SEQ ID N0:1) .
It is preferred that when Xaa34 is aspartic acid, then Xaa4ι is arginine or lysine. It is also preferred that Xaa39 is serine. It is also preferred that when Xaa41 is aspartic acid or arginine, then Xaa42, Xaa43, and Xaa4 are all proline. The C-terminal amino acid may be in the typical acid form or may be amidated.
A preferred genus of extended GLP-1 peptides comprise the amino acid sequence of formula 4 (SEQ ID NO : 4 )
Xaa7-Xaa8-Glu-Gly-Thr-Phe-Thr-Ser-Asp-Val-Ser-Ser- Tyr- ys -Glu -Xaa22 -Gin-Ala -Xaa25- Lys -Glu -Phe -lie -Ala-
Trp-Leu-Xaa33-Lys-Gly-Gly-Pro-Xaa38-Xaa39-Xaa4o-Xaa4ι- Xaa42 -Xaa43 -Xaa4 -Xaa45 -Xaa46 -Xaa47 Formula 4 (SEQ ID NO : 4 ) wherein: Xaa7 is: L-histidine, D-histidine, desamino-histidine, 2- a ino-histidine, β-hydroxy-histidine , homohistidine, α-fluoromethyl -histidine, or α- methyl-histidine ; Xaa8 is: Gly, Val, Leu, lie, Ser, or Thr; Xaa22 is: Gly, Glu, Asp, or Lys; Xaa25 is: Ala, Val, lie, or Leu; Xaa33 is: Val or lie; Xaa38 is: Ser, Pro, or His; Xaa39 is: Ser, Arg, Thr, Trp, or Lys; Xaa 0 is: Ser or Gly;
Xaa ι is: Ala, Asp, Arg, Glu, Lys, or Gly; Xaa42 is: Pro or Ala; Xaa 3 is: Pro or Ala; Xaa44 is: Pro, Ala, Arg, Lys, His, NH2, or is absent; Xaa 5 is: Ser, His, Pro, Lys, Arg, NH2 or is absent; Xaa46 is: His, Ser, Arg, Lys, NH2 or is absent; and Xaa47 is: His, Ser, Arg, Lys, NH2 or is absent; provided that if Xaa44, Xaa 5, Xaa46, or Xaa47 is absent each amino acid downstream is absent.
Preferred extended GLP-1 peptides are peptides of formula 4 (SEQ ID NO:4) wherein Xaa7 is L-His, Xaa8 is Gly or Val, Xaa22 is Glu, Xaa25 is Val, Xaa33 is lie, Xaa38 is Ser, Xaa39 is Ser, Xaa40 is Gly, Xaa4i is Ala, Xaa 2 is Pro, Xaa43 is Pro, Xaa 4 is Pro, Xaa45 is Ser and Xaa46 and Xaa47 are absent and amidated forms of thereof . Preferred extended GLP-1 peptides also include peptides of formula 4 (SEQ ID NO:4) wherein Xaa7 is L-His, Xaa8 is Val, Xaa22 is Glu, Xaa25 is Ala, Xaa33 is lie, Xaa38 is Ser, Xaa39 is Ser, Xaa40 is Gly, Xaa41 is Ala, Xaa 2 is Pro, Xaa43 is Pro, Xaa 4 is Pro, Xaa 5 is Ser and Xaa46 and Xaa47 are absent and amidated forms thereof. Other preferred extended GLP-1 peptides include peptides of formula 4 (SEQ ID NO:4) wherein Xaa7 is L-His, Xaa8 is Val, Xaa22 is Gly, Xaa25 is Ala, Xaa33 is lie, Xaa38 is Ser, Xaa39 is Ser, Xaa 0 is Gly, Xaa4X is Ala, Xaa42 is Pro, Xaa43 is Pro, Xaa 4 is Pro, Xaa 5 is Ser, and Xaa46 and Xaa47 are absent and amidated forms thereof. The present invention encompasses the discovery that specific amino acids added to the C-terminus of a GLP-1 peptide provide specific structural features that protect the peptide from degradation by various proteases yet do not negatively impact the biological 'activity of the peptide. Further, many of the extended peptides disclosed herein are more potent than DPP-IV resistant GLP-1 analogs such as Val8-GLP-1 (7-37)OH.
Example 1 provides in vi tro potency data for a representative number of extended GLP-1 peptides. The in vi tro potency of the tested extended GLP-1 peptides ranged from about the same as Val8-GLP-1 (7-37) OH to greater than 7- fold more potent than Val8-GLP-1 (7-37) OH. Further, example 5 illustrates that extended GLP-1 peptides are also more potent in vivo .
Example 2 provides a measure of protease insensitivity for a representative number of extended GLP-1 analogs. The relative proteolytic stability was determined by exposing extended GLP-1 peptides and Val8-GLP-1 (7-37) OH to α- chymotrypsin and then plotting the progress of the enzymatic reaction as described in Example 2. The extended GLP-1 peptides tested ranged from as stable as Val8-GLP-1 (7-37) OH to 5-fold more stable than Val8-GLP-1 (7-37) OH .
The extended GLP-1 peptides of the present invention also have an increased half-life in vivo as indicated in example 4. The in vivo half -life of these extended peptides is generally longer than the half-life of DPP-IV protected GLP-1 analogs such as Val8-GLP-1 (7-37) OH .
The extended GLP-1 peptides of the present invention are suited for oral administration, nasal administration, pulmonary inhalation or parenteral administration. Parenteral administration can include, for example, systemic administration, such as by intramuscular, intravenous, subcutaneous, or intraperitoneal injection. The GLP-1 compounds can be administered to the subject in conjunction with an acceptable pharmaceutical carrier, diluent or excipient as part of a pharmaceutical composition for treating various diseases and conditions discussed herein. The pharmaceutical composition can be a solution or a suspension. Suitable pharmaceutical carriers may contain inert ingredients which do not interact with the peptide or peptide derivative. Standard pharmaceutical formulation techniques may be employed such as those described in Remington's Pharmaceutical Sciences, Mack Publishing Company, Easton, PA. Suitable pharmaceutical carriers for parenteral administration include, for example, sterile water, physiological saline, bacteriostatic saline (saline containing about 0.9% mg/ml benzyl alcohol), phosphate- buffered saline, Hank's solution, Ringer ' s-lactate and the like. Some examples of suitable excipients include lactose, dextrose, sucrose, trehalose, sorbitol, and mannitol .
The GLP-1 compounds may be formulated for administration such that blood plasma levels are maintained in the efficacious range for extended time periods. For example, depot formulations wherein a bioadsorbable polymer is used to provide sustained release over time are also suitable for use in the present invention. The main barrier to effective oral peptide drug delivery is poor bioavailability due to degradation of peptides by acids and enzymes, poor absorption through epithelial membranes, and transition of peptides to an insoluble form after exposure to the acidic pH environment in the digestive tract. This reduced bioavailability necessitates the use of GLP-1 compounds with increased potency, increased stability, or both. Oral delivery systems for peptides such as those encompassed by the present invention are known in the art . For example, GLP-1 compounds can be encapsulated using microspheres or other carriers and then delivered orally.
The extended GLP-1 peptides described herein can be used to treat subjects with a wide variety of diseases and conditions. The extended GLP-1 peptides encompassed by the present invention exert their biological effects by acting at a receptor referred to as the "GLP-1 receptor" (see Dillon,' J.S. et al . (1993), Endocrinology, 133: 1907-1910). Subjects with diseases and/or conditions that respond favorably to GLP-1 receptor stimulation or to the administration of extended GLP-1 peptides can therefore be treated. These subjects are said tc "be in need of treatment with extended GLP-1 peptides" or "in need of GLP-1 receptor stimulation" .
Included are subjects with non-insulin dependent diabetes, insulin dependent diabetes, stress-induced hyperglycemia, stroke (see WO 00/16797 by Efendic) , myocardial infarction (see WO 98/08531 by Efendic) , catabolic changes after surgery (see U.S. Patent No.
6,006,753 to Efendic), functional dyspepsia and irritable bowel syndrome (see WO 99/64060 by Efendic) . Also included are subjects requiring prophylactic treatment with a GLP-1 peptide, e.g., subjects at risk for developing non-insulin dependent diabetes (see WO 00/07617) . Additional subjects include those with impaired glucose tolerance or impaired fasting glucose, subjects with a partial pancreatectomy, subjects having one or more parents with non- insulin dependent diabetes, subjects who have had gestational diabetes and subjects who have had acute or chronic pancreatitis and are at risk for developing non-insulin dependent diabetes.
The extended GLP-1 peptides of the present invention are also useful in treating subjects who are overweight. Particularly suited are those subjects whose body weight is about 25% above normal body weight for the subject's height and body build. Thus, the .extended GLP-1 peptides can also be used to treat obesity (see WO 98/19698 by Efendic) . The extended GLP-1 peptides of the present invention can be used to normalize blood glucose levels, prevent pancreatic β-cell deterioration, induce β-cell proliferation, stimulate insulin gene transcription, up- regulate IDX-l/PDX-1 or other growth factors, improve β-cell function, activate dormant β-cells, differentiate cells into β-cells, stimulate β-cell replication, inhibit β-cell apoptosis, regulate body weight, and induce weight loss.
An "effective amount" of an extended GLP-1 peptide is the quantity which results in a desired therapeutic and/or prophylactic effect without causing unacceptable side- effects when administered to a subject in need of GLP-1 receptor stimulation. A "desired therapeutic effect" includes one or more of the following: 1) an amelioration of the symptom (s) associated with the disease or condition; 2) a delay in the onset of symptoms associated with the disease or condition; 3) increased longevity compared with the absence of the treatment; and 4) greater quality of life compared with the absence of the treatment. For example, an "effective amount" of an extended GLP-1 peptide for the treatment of type 2 diabetes is the quantity that would result in greater control of blood glucose concentration than in the absence of treatment, thereby resulting in a delay in the onset of diabetic complications such as retinopathy, neuropathy or kidney disease. An "effective amount" of an extended GLP-1 peptide for the prevention of diabetes is the quantity that would delay, compared with the absence of treatment, the onset of elevated blood glucose levels that require treatment with drugs such as sulfonylureas, thiazolidinediones, insulin and/or bisguanidines .
A typical dose range for the extended GLP-1 peptides of the present invention will range from about 1 μg to about 100 mg per day. Preferably, the dose range is about 5 μg to about 1 mg per day. Even more preferably the dose is about 10 μg to about 100 μg per day.
A "subject" is a mammal, preferably a human, but can also be an animal, e.g., companion animals (e.g., dogs, cats, and the like), farm animals (e.g., cows, sheep, pigs, horses, and the like) and laboratory animals (e.g., rats, mice, guinea pigs, and the like).
The extended GLP-1 peptides of the present invention can be prepared using recombinant DNA technology or by using standard methods of solid-phase peptide synthesis techniques. Peptide synthesizers are commercially available from, for example, Applied Biosystems in Foster City CA. Reagents for solid phase synthesis are commercially available, for example, from Midwest Biotech (Fishers, IN) . Solid phase peptide synthesizers can be used according to manufacturers instructions for blocking interfering groups, protecting the amino acid to be reacted, coupling, decoupling, and capping of unreacted amino acids.
Typically, an -N-carbamoyl protected amino acid and the N-terminal amino acid on the growing peptide chain on a resin is coupled at room temperature in an inert solvent such as di ethylformamide, N-methylpyrrolidone or methylene chloride in the presence of coupling agents such as dicyclohexylcarbodiimide and 1-hydroxybenzotriazole and a base such as diisopropylethylamine . The α-N-carbamoyl protecting group is removed from the resulting peptide resin using a reagent such as trifluoroacetic acid or piperidine, and the coupling reaction repeated with the next desired N- protected amino acid to be added to the peptide chain. Suitable amine protecting groups are well known in the art and are described, for example, in Green and Wuts, "Protecting Groups in Organic Synthesis" , John Wiley and Sons, 1991, the entire teachings of which are incorporated by reference. Examples include t-butyloxycarbonyl (tBoc) and fluorenylmethoxycarbonyl (Fmoc) .
After completion of synthesis, peptides are cleaved from , the solid-phase support with simultaneous side-chain deprotection using standard hydrogen fluoride or trifluoroacetic acid cleavage protocols. Crude peptides are then further purified using Reversed-Phase Chromatography on Vydac C18 columns employing linear water-acetonitrile gradients with all solvents containing 0.1% trifluoroacetic acid (TFA) . To remove acetonitrile, peptides are lyophilized from a solution containing 0.1 % TFA, acetonitrile and water. Purity can be verified by analytical reversed phase chromatography. Identity of peptides can be verified by mass spectrometry . Peptides can be solubilized in aqueous buffers at neutral pH.
EXAMPLES
Example 1
In vi tro potency: HEK-293 Aurora CRE-BLAM cells expressing the human GLP- 1 receptor are seeded at 20,000 to 40,000 cells/well/100 μl into a 96 well black clear bottom plate. The day after seeding, the medium is replaced with plasma free medium. On the third day after seeding, 20 μl of plasma free medium containing different concentrations of GLP-1 agonist is added to each well to generate a dose response curve. Generally, fourteen dilutions containing from 3 nanomolar to 30 nanomolar GLP-1 compound were used to generate a dose response curve from which EC50 values could be determined. After 5 hours of incubation with GLP-1 compound, 20 μl of β- lactamase substrate (CCF2-AM - Aurora Biosciences - product code 100012) was added and incubation was continued for 1 hour at which point the fluorescence was determined on a cytofluor. The following GLP-1 peptides were tested and had EC50 values ranging from about the same as to approximately 8-fold greater than the activity of Val8-GLP-1 (7-37) OH :
HVEGTFTSDVSSYLEEQAAKEFIAWLVKGRG SEQ ID NO : 6 HVEGTFTSDVSSYLEEQAAKEFIAWLIDGGPSSGRPPPS-NH2 SEQ ID NO: 7 HVEGTFTSDVSSYLEEQAAKEFIAWLVKGRGSSGDPPPS-NH2 SEQ ID NO: 8
HVEGTFTSDVSSYLEEQAAKEFIAWLVKGRPSSGDPPPS-NH2 SEQ ID NO : 9
HVEGTFTSDVSSYLEEQAAKEFIAWLIKGGPSSGDPPPS-NH2 SEQ ID NO: 10
HVEGTFTSDVSSYLEEQAAKEFIAWLVKGRPSSGAPPPS-NH2 SEQ ID NO: 11
HVEGTFTSDVSSYLEEQAAKEFIAWLIKGGPSSGAPPPS-NH2' SEQ ID NO: 12 HVEGTFTSDVSSYLEEQAVKEFIA LIKGGPSSGAPPPS-NH2 SEQ ID NO: 13
HVEGTFTSDVSSYLEEQAVKEFIA LVKGGPSSGAPPPS-NH2 SEQ ID NO: 14
HVEGTFTSDVSSYLEEQAVKEFIA LIKGGPSSGDPPPS-NH2 SEQ ID NO: 15
HVEGTFTSDVSSYLEEQAAKEFIA LIKGGGSSGDPPPS-NH2 SEQ ID NO: 16
HVEGTFTSDVSSYLEEQAAKEFIAWLIKGPGSSGDPPPS-NH2 SEQ ID NO: 17 HVEGTFTSDVSSYLEEQAAKEFIA LIKGGSPSGDPPPS-NH2 SEQ ID NO: 18 HVEGTFTSDVSSYLEEQAAKEFIAWLIKGGPSSGDPPS-NH2 SEQ ID NO: 19
HVEGTFTSDVSSYLEEQAAKEFIA LIKGGPSSGDPPPS SEQ ID NO: 20
HVEGTFTSDVSSY EEQAAKEFIA LIKGGPSSGDAPPS-NH2 SEQ ID NO: 21
HVEGTFTSDVSSYLEEQAAKEFIA LIKGGPSSGDPAPS-NH2 SEQ ID NO: 22 HVEGTFTSDVSSY EEQAAKEFIA LIKGGPSSGDPPAS-NH2 SEQ ID NO: 23
HVEGTFTSDVSSYLEEQAAKEFIA LIKGGPSSGDAAAS-NH2 SEQ ID NO: 24
HVEGTFTSDWSSYLEGQAAKEFIAW IKGGPSSGAPPPS SEQ ID NO: 25
HVEGTFTSDWSSYLEGQAAKEFIA IKGGPSSGAPPPH SEQ ID NO: 26
HVEGTFTSDVSSYLEGQAAKEFIA IKGGPSSGAPPPS SEQ ID NO: 27 HVEGTFTSDVSSYLEGQAAKEFIA LIKGGPSSGDPPPS SEQ ID NO: 28 HVEGTFTSDWSSYLEGQAAKEFIAWLIKGGPSSGAPPPSH SEQ ID NO: 29 HVEGTFTSDWSSY EGQAAKEFIAWLIKGGPHSSGAPPPS SEQ ID NO: 30
HVEGTFTSDVSSY EGQAAKEFIAW VKGRGSSGAPPPS SEQ ID NO: 31
HVEGTFTSDVSSY EGQAAKEFIAWLVKGGPSSGAPPPS SEQ ID NO: 32 HVEGTFTSDVSSY EEQAAKEFIAWLVKGGPSSGAPPPS SEQ ID NO: 33
HVEGTFTSDVSSYLEEQAAKEFIAWLVKGRGSSGAPPPS SEQ ID NO: 34
HVEGTFTSDVSSY EEQAVKEFIAWLIKGRGSSGAPPPS SEQ ID NO: 35
HVEGTFTSDWSSY EEQAAKEFIA LIKGRGSSGAPPPS SEQ ID NO: 36 HVEGTFTSDVSSY EEQAAKEFIAW IKGRGHSSGAPPPS SEQ ID NO: 37 HVEGTFTSDVSSYLEEQAAKEFIAWLVKGRGHSSGAPPPS SEQ ID NO: 38 HVEGTFTSDWSSYLEEQAAKEFIAW IKGGPHSSGAPPPSH SEQ ID NO: 39 HVEGTFTSDWSSYLEEQAAKEFIAW IKGGPSSGAPPPSH SEQ ID NO: 40 HVEGTFTSDVSWYLEGQAVKEFIA LIKGGPHSSGAPPPS SEQ ID NO: 41 HVEGTFTSDVSSYLEEQAVKEFIAWLIKGGPSSGAPPPS SEQ ID NO: 42 HVEGTFTSDVSSYLEEQAVKEFIAW IKGGPSSGAPPPSH SEQ ID NO: 43 HVEGTFTSDWSSYLEEQAVKEFIAWLIKGGPSSGAPPPS SEQ ID NO: 44 HVEGTFTSDWSSYLEEQAVKEFIA LIKGGPSSGAPPPSH SEQ ID NO: 45 HVEGTFTSDWSSYLEEQAVKEFIAW IKGGPHSSGAPPPS SEQ ID NO: 46 HVEGTFTSDWSKYLEEQAVKEFIAW IKGGPSSGAPPPSH SEQ ID NO: 47 HVEGTFTSDVSSY EEQAVKEFIA LIKGGPSSGAPPPRG SEQ ID NO: 48 HVEGTFTSDVSSYLEEQAVKEFIAW IKGGPSSGAPPPRG-NH2 SEQ ID NO: 49 HVEGTFTSDVSSY EEQAAKEFIAW VKGGPSSGAPPPS-NH2 SEQ ID NO: 50 HVEGTFTSDVSSYLEEQAAKEFIAW VDGGPSSGRPPPS-NH2 SEQ ID NO: 51 HVEGTFTSDVSSYLEEQAAKEFIAW VDGGPSSGRPPPS SEQ ID NO: 52 HVEGTFTSDVSSYLEEQAAKEFIAW VDGGPSSGKPPPS SEQ ID NO: 53 HVEGTFTSDVSSYLEEQAAKEFIA VDGGPSSGRG SEQ ID NO: 54 HVEGTFTSDVSSYLEEQAAKEFIA IKGGPSSGAPPPS SEQ ID NO: 55 HVEGTFTSDVSSYLEEQAAKEFIAWLVKGGPSWGAPPPS SEQ ID NO: 56
HVEGTFTSDVSSY EEQAAKEFIA IKGGPSSGAPPPGPS SEQ ID NO: 57 HVEGTFTSDVSSYLEEQAAKEFIAWLIKGGPSSGAPPPGPSGPS SEQ ID NO: 58
Example 2
Proteolytic stability:
The relative susceptibility of various extended GLP-1 peptides to Ot-chymotrypsin was assessed in a reaction mixture with the control peptide Val8-GLP-1 (7-37) OH. A 10 mM phosphate/citrate solution, pH 7.4, was prepared containing GLP-1 peptides at a concentration of 100 μM. A 10 μl aliquot of this solution was then incubated at 4°C in a 200 ul 10 mM phosphate/citrate solution, pH 7.4, containing 10 mM CaCl2. Alpha-Chymotrypsin (SIGMA, C-3142 lot 89F8155) was then added to a final concentration of 250 ng/ml . A 20 μl aliquot was injected onto an analytical Zorbax 300SB-C8 (4.6 mm i.d. x 50 mm) column at a 1 ml/min flowrate in 10% acetonitrile/0.075% TFA before addition of the enzyme, as well as 20,' 40, 60, 80, and 100 minutes following addition of the enzyme.' Peaks were separated with a gradient of 10 to 90% acetonitrile/0.075% TFA over 15 min. The progress of the enzymatic reaction was followed by plotting loss of peak area of the starting material over time'. The rate of proteolytic degradation was calculated from the initial rate of cleavage (timepoint 0 and 20 min) and directly compared to the rate of cleavage of the control peptide Val8-GLP-1 (7-37) OH. The following extended GLP-1 peptides were tested and had stability rates ranging from about the same as to greater than 5-fold more stable than Vale-GLP-1 (7-37)OH: HVEGTFTSDVSSYLEEQAAKEFIA IKGGPSSGDPPPS-NH2' SEQ ID NO: 10 HVEGTFTSDVSSYLEEQAAKEFIA IDGGPSSGRPPPS-NH2 SEQ ID NO : 7 HVEGTFTSDVSSYLEEQAAKEFIA VKGRGSSGDPPPS-NH2 SEQ ID NO: 8 HVEGTFTSDVSSYLEEQAAKEFIA VKGRPSSGDPPPS-NH2 SEQ ID NO : 9 HVEGTFTSDVSSYLEEQAAKEFIAWLIKGGPSSGAPPPS-NH2 SEQ ID NO: 12 HVEGTFTSDVSSYLEEQAVKEFIA I GGPSSGAPPPS-NH2 SEQ ID NO: 13 HVEGTFTSDVSSYLEEQAVKEFIAWLVKGGPSSGAPPPS-NH2 SEQ ID NO: 14
HVEGTFTSDVSSYLEEQAVKEFIAW IKGGPSSGDPPPS-NH2 SEQ ID NO: 15 HVEGTFTSDVSSYLEEQAAKEFIA LIKGGGSSGDPPPS-NH2 SEQ ID NO: 16 HVEGTFTSDVSSY EEQAAKEFIA LIKGPGSSGDPPPS-NH2 SEQ ID NO: 17 HVEGTFTSDVSSY EEQAAKEFIAW IKGGSPSGDPPPS-NH2 SEQ ID NO: 18 HVEGTFTSDVSSYLEEQAAKEFIAWLIKGGPSSGDPPS-NH2 SEQ ID NO: 19 HVEGTFTSDVSSY EEQAAKEFIA LIKGGPSSGDPPPS SEQ ID NO: 20 HVEGTFTSDVSSYLEEQAAKEFIA LIKGGPSSGDAPPS-NH2 SEQ ID NO: 21 HVEGTFTSDVSSYLEEQAAKEFIA LIKGGPSSGDPAPS-NH2 SEQ ID NO: 22 HVEGTFTSDVSSYLEEQAAKEFIAW IKGGPSSGDPPAS-NH2 SEQ ID NO: 23 HVEGTFTSDVSSYLEEQAAKEFIAWLIKGGPSSGDAAAS-NH2 SEQ ID NO: 24 HVEGTFTSDWSSYLEGQAAKEFIAW IKGGPSSGAPPPS SEQ ID NO: 25 HVEGTFTSDWSSYLEGQAAKEFIAWLIKGGPSSGAPPPH SEQ ID NO: 26 HVEGTFTSDVSSYLEGQAAKEFIA LIKGGPSSGAPPPS SEQ ID NO: 27 HVEGTFTSDVSSYLEGQAAKEFIA LVKGGPSSGAPPPS SEQ ID NO: 32 HVEGTFTSDVSSYLEEQAAKEFIAWLVKGGPSSGAPPPS SEQ ID NO: 33
HVEGTFTSDVSSYLEEQAAKEFIA VKGRGHSSGAPPPS SEQ ID NO: 38 HVEGTFTSDWSSYLEEQAAKEFIA IKGGPHSSGAPPPSH SEQ ID NO: 39 HVEGTFTSDVSSYLEEQAVKEFIA IKGGPSSGAPPPSH SEQ ID NO: 43 HVEGTFTSDVSSYLEEQAVKEFIA IKGGPSSGAPPPRG SEQ ID NO: 48 HVEGTFTSDVSSY EEQAAKEFIA VDGGPSSGRG SEQ ID NO: 54
Example 3 Physical stability:
Extended GLP-1 peptides were analyzed with respect to their potential to aggregate in solution. In general, peptides in solution were stirred at elevated temperature in a suitable buffer while recording turbidity at 350 nm as a function of time. Time to the onset of aggregation was measured to quantify the potential of a given GLP molecule to aggregate under these stressed conditions.
A GLP-1 peptide was first dissolved under alkaline conditions (pH 10.5) for 30 minutes to dissolve any pre- aggregated material. The solution was then adjusted to pH
7.4 and filtered. Specifically, 4 mg of a lyophilized GLP-1 compound was dissolved in 3 ml of 10 mM phosphate/10 mM citrate. The pH was adjusted to 10.0-10.5 and held for 30 minutes. The solution was adjusted with HCI to pH 7.4 and filtered through a suitable filter, for example a Millex GV syringe filter (Millipore Corporation, Bedford, MA) . This solution was then diluted to a final sample containing 0.3 mg/mL protein in 10 mM citrate, 10 mM phosphate, 150 mM NaCl , and adjusted to pH 7.4 to 7.5. The sample was incubated at 37°C in a quartz cuvette. Every five minutes the turbidity of the solution was measured at 350 nm on an AVIV Model 14DS UN-VIS spectrophotometer (Lakewood, ΝJ) . For 30 seconds prior to and during the measurement the solution was stirred using a magnetic stir bar from Starna Cells, Inc. (Atascadero, CA) . An increase in OD at 350 nm indicates aggregation of the GLP-peptide. The time to aggregation was approximated by the intersection of linear fits to the pre-growth and growth phase according to the method of Drake (Arvinte T, Cudd A, and Drake AF . (1993; J. Biol . Chem . 268, 6415-6422).
The cuvette was cleaned between experiments with a caustic soap solution (e.g., Contrad-70) . The following extended GLP-1 peptides were tested and were stable in solution for at least 55 hours compared to Val8-GLP-1 (7- 37) OH which was stable for about 1 hour:
HVEGTFTSDVSSYLEEQAAKEFIAWLIKGGPSSGDPPPS-NH2 SEQ ID NO: 10 HVEGTFTSDVSSYLEEQAAKEFIAWLIDGGPSSGRPPPS-NH2 SEQ ID NO : 7 HVEGTFTSDVSSYLEEQAAKEFIA VKGRGSSGDPPPS-NH2 SEQ ID NO : 8 HVEGTFTSDVSSYLEEQAVKEFIA LIKGGPSSGDPPPS-NH2 SEQ ID NO: 15 HVEGTFTSDVSSYLEEQAAKEFIA LIKGGPSSGDPPPS SEQ ID NO: 20 HVEGTFTSDWSSYLEGQAAKEFIA LIKGGPSSGAPPPS SEQ' ID NO: 25 HVEGTFTSDWSSYLEGQAAKEFIA IKGGPSSGAPPPH SEQ ID NO: 26 HVEGTFTSDVSSY EGQAAKEFIA LIKGGPSSGAPPPS SEQ ID NO: 27 HVEGTFTSDWSSYLEGQAAKEFIAW IKGGPHSSGAPPPS SEQ ID NO: 30 HVEGTFTSDVSSY EGQAAKEFIA LVKGGPSSGAPPPS SEQ ID NO: 32 HVEGTFTSDVSSYLEEQAAKEFIA LVKGGPSSGAPPPS SEQ ID NO: 33 HVEGTFTSDVSSYLEEQAVKEFIA LIKGGPSSGAPPPS SEQ ID NO: 42
HVEGTFTSDWSSYLEEQAAKEFIA IKGGPHSSGAPPPSH SEQ ID NO: 39 HVEGTFTSDWSSYLEEQAVKEFIA IKGGPSSGAPPPS SEQ ID NO: 44 HVEGTFTSDVSSY EEQAAKEFIA LVDGGPSSGRG SEQ ID NO: 54 HVEGTFTSDVSSYLEEQAAKEFIA LIKGGPSSGAPPPS SEQ ID NO: 55 HVEGTFTSDVSSYLEGQAAKEFIA LVKGRGSSGAPPPS SEQ ID NO: 31 HVEGTFTSDVSSYLEEQAVKEFIA LIKGRGSSGAPPPS SEQ ID NO: 35 HVEGTFTSDWSSYLEEQAAKEFIA LIKGRGSSGAPPPS SEQ ID NO: 36
Example 4 Pharmacokinetics of an extended GLP-1 peptide:
Pharmacokinetic parameters were determined for the following 5 different extended GLP-1 peptides: Compound 1: HVEGTFTSDVSSYLEEQAAKEFIAWLIKGGPSSGDPPPS-NH2
SEQ ID NO: 10 Compound 2: HVEGTFTSDVSSYLEEQAAKEFIAWLIKGGPSSGDPPPS
SEQ ID NO: 20 Compound 3 : HVEGTFTSDVSSYLEEQAAKEFIAWLVKGRGSSGAPPPS SEQ ID NO: 34 Compound 4 : HVEGTFTSDVSSYLEGQAAKEFIAWLVKGRGSSGAPPPS
SEQ ID NO: 31 Compound 5 : HVEGTFTSDWSSYLEEQAAKEFIAWLIKGRGSSGAPPPS
SEQ ID NO: 36 Parameters were determined following a single intravenous dose of lOμg/kg in four different rats. Data are listed in Tables 1 and 2
Table 1: PK parameters for extended GLP-1 peptides following a single intravenous injection of 10 μg/kg to Sprague Dawley rats .
Figure imgf000031_0001
Abbreviations: , kg = killigram, μg = microgram, min = minute, ng = nanogram, mL = milliliter, Cmax = maximum plasma concentration, AUC = area under the concentration curve, tl/2 = plasma half life, CI = clearance, V = volume of distribution based on the terminal phase, SD = Standard Deviation. Table 2: Plasma Concentrations (pg/mL) of extended GLP-1 peptides following a single intravenous administration of 10 μg/kg to Sprague Dawley rats.
Figure imgf000032_0001
NC = not calculated; μg = microgram; pg = picogram; mL = milliliter; kg = kilogram; min = minute. a Less than the lower limit of quantitation (a value of zero was used for the purpose of calculations) . Example 5
In vivo activity of extended GLP-1 peptides: Several different extended and non-extended GLP-1 peptides were tested for activity in a hyperglycemic clamp study in dogs. Glucose was infused for 200 minutes to maintain constant levels. For the first 80 minutes dogs were infused intravenously with vehicle to establish a baseline insulin concentration. For the next 60 minutes,
GLP-1 peptides were administered at 'a rate of 1 pmol/kg/min. For the final 60 minutes the infusion rate of each GLP-1 compound was increased to 3 pmol/kg/min. Blood samples were taken periodically for the determination of insulin and GLP- 1 peptide concentrations. Insulin change values were calculated as the difference between the value at time t and the average value during the last 20 minutes of the control period (60-80) minutes and are presented in Table 3. Areas under the insulin change curves were calculated using the trapezoidal rule over the last 30 minutes of each infusion period. GLP-1 peptide concentrations are presented in Table 4. Values listed are the means ± standard error of the mean (SEM) .
Table 3: Pharmacodynamics from dog hyperglycemic (150 mg/dL) clamp studies
Figure imgf000033_0001
Figure imgf000034_0001
Table 4: GLP-1 peptide concentration from dog hyperglycemic (150 mg/dL) clamp studies after 60 minutes of compound infusion.

Claims

CLAIMSWhat is claimed is
1. An extended GLP-1 peptide comprising an amino acid sequence of the formula:
Xaa7-Xaa8-Glu-Gly-Thr-Xaai2-Thr-Ser-Asp-Xaaι6-Ser- Xaai8-Xaai9-Xaa2o-Glu-Xaa22-Gln-Ala-Xaa25-Lys-Xaa27- Phe-Ile-Xaa30-Trp-Leu-Xaa33-Xaa34-Gly-Xaa36-Xaa37- Xaa38 -Xaa39 -Xaa4o — Xaa4ι -Xaa42 -Xa -Xaa 4 — Xaa45 -Xaa4g - Xa 7
Formula 1 (SEQ ID NO: 1) wherein: >
Xaa7 is: L-histidine, D-histidine, desamino-histidine, 2- amino- histidine , β- hydroxy -histidine, homohistidine, α-f luoromethyl -histidine , or α- methyl -histidine ;
Xaa8 is: Ala, Gly, Val, Leu, lie, Ser, or Thr;
Xaa12 is: Phe, Trp, or Tyr;
Xaaiβ is: Val, Trp, lie, Leu, Phe, or Tyr;
Xaais is: Ser, Trp, Tyr, Phe, Lys, lie, Leu, Val;
Xaai9 is: Tyr, Trp, or Phe ;
Xaa2o is: Leu, Phe, Tyr, or Trp;
Xaa22 is: Gly, Glu, Asp, or Lys;
Xaa25 is: Ala, Val, lie, or Leu;
Xaa27 is: Glu, lie, or Ala;
Xaa30 is: Ala or Glu
Xaa33 is: Val or lie;
Xaa3 is: Lys, Asp, Arg, or Glu;
Xaa36 is: Gly, Pro, or Arg;
Xaa37 is: Gly, Pro, or Ser;
Xaa38 is: Ser, Pro, or His;
Xaa39 is: Ser, Arg, Thr, Trp, or Lys ;
Xaa40 is: Ser or Gly;
Xaa is: Ala, Asp, Arg, Glu, Lys, or Gly; Xaa42 is: Pro, Ala, NH2, or is absent;
Xaa3 is: Pro, Ala, NH2, or is absent;
Xaa4 is: Pro, Ala, Arg, Lys, His, NH2, or is absent;
Xaa5 is: Ser, His, Pro, Lys, Arg, NH2 or is absent; Xaa46 is: His, Ser, Arg, Lys, NH2 or is absent; and
Xaa7 is: His, Ser, Arg, Lys, NH2 or is absent; provided that if Xaa42, Xaa3, Xaa44 , Xaa45, Xaa6, or Xaa47 is absent each amino acid downstream is absent and further provided that if Xaa36 is Arg and Xaa37 is Gly or Ser, the GLP-1 peptide does not have the following C-terminal amino acid extension beginning at Xaa38 : Ser-Ser-Gly-Ala-Pro-Pro-Pro-Ser-NH2.
2. The GLP-1 peptide of Claim 1 wherein the first 31 amino acids of the peptide do not differ from GLP-1 (7-37) by more than 6 amino acids.
3. The GLP-1 peptide of Claim 2 wherein the first 31 amino acids of the peptide do not differ from GLP-1 (7-37) by more than 5 amino acids.
4. The GLP-1 peptide of Claim 3 wherein the first 31 amino acids of the peptide do not differ from GLP-1 (7-37) by more than 4 amino acids.
5. The GLP-1 peptide of Claim 4 wherein the first 31 amino acids of the peptide do not differ from GLP-1 (7-37) by more than 3 amino acids .
6. The GLP-1 peptide of any one of Claims 1 through 5 wherein Xaa7 is L-histidine, Xaa8 is Val or Gly, and Xaa22 is Glu.
7. The GLP-1 peptide of any one of Claims 1 through 5 wherein Xaa7 is L-histidine, Xaa8 is Val or Gly, and
Figure imgf000037_0001
8. The GLP-1 peptide of Claim 7 wherein Xaa2 is Glu.
9. The GLP-1 peptide of any one of Claims 1 through 5 wherein Xaa7 is L-histidine, Xaa8 is Val or Gly, and
Figure imgf000037_0002
10. The GLP-1 peptide of Claim 9 wherein Xaa22 is Glu.
11. The GLP-1 peptide of any one of Claims 1 through 5 wherein Xaa7 is L-histidine, Xaa8 is Val or Gly, and Xaa33 is lie.
12. The GLP-1 peptide of Claim 11 wherein Xaa22 is Glu.
13. The GLP-1 peptide of any one of Claims 1 through 5 wherein Xaa7 is L-histidine, Xaa8 is Val or Gly, and
Xaa34 is Asp.
14. The GLP-1 peptide of Claim 13 wherein Xaa22 is Glu.
15. The GLP-1 peptide of Claim 13 wherein Xaa4i is Arg.
16. The GLP-1 peptide of any one of Claims 1 through 5 wherein Xaa7 is L-histidine, Xaa8 is Val or Gly, Xaa36 is Gly, and Xaa37 is Pro.
17. The GLP-1 peptide of any one of Claims 1 through 5 wherein Xaa7 is L-histidine, Xaa8 is Val or Gly, and Xaais is Trp.
18. The GLP-1 peptide of any one of Claims 1 through 5 wherein Xaa7 is L-histidine, Xaa8 is Val or Gly, and Xaa2o is Trp.
19. The GLP-1 peptide of any one of Claims 1 through 18 wherein the C-terminal amino acid is amidated.
20. The GLP-1 peptide of any one of Claims 1 through 5 wherein the C-terminal amino acid is His.
21. An extended GLP-1 peptide comprising the amino acid sequence of the formula
Xaa7-Xaa8-Glu-Gly-Thr-Phe-Thr-Ser-Asp-Xaaι6-Ser-Ser- Tyr-Lys-Glu-Xaa22-Gln-Ala-Xaa25-Lys-Glu-Phe-Ile-Ala- Trp-Leu-Xaa33-Xaa34-Gly-Xaa36-Xaa37-Xaa38-Xaa39-Xaa40-
Xaa4i -Xaa42 -Xaa43 -Xaa44 -Xaa45-Xaa46 — Xaa47 Formula 3 (SEQ ID NO: 3) wherein: Xaa7 is: L-histidine, D-histidine, desamino-histidine, 2- amino-histidine, β-hydroxy-histidine, homohistidine, α-f luoromethyl -histidine , or α- me thy l-histidine;
Xaa8 is: Gly, Val, Leu, lie, Ser, or Thr;
Xaai6 is: Val, Trp, lie, Leu, Phe, or Tyr; Xaa22 is: Gly, Glu, Asp, or Lys;
Xaa25 is: Ala, Val, lie, or Leu;
Xaa33 is: Val or lie;
Xaa3 is: Lys, Asp, Arg, or Glu;
Xaa36 is: Gly, Pro, or Arg; Xaa37 is: Gly, Pro, or Ser;
Xaa38 is: Ser, Pro, or His,
Xaa39 is: Ser, Arg, Thr, Trp, or Lys;
Xaa40 is: Ser or Gly;
Xaa ι is: Ala, Asp, Arg, Glu, Lys, or Gly; Xaa2 is: Pro, Ala, NH2 or is absent;
Xaa43 is: Pro, Ala, NH2 or is absent;
Xaa44 is: Pro, Ala, Arg, Lys, His; NH2, or is absent;
Xaa5 is: Ser, His, Pro, Lys, Arg, NH2 or is absent;
Xaa46 is: His, Ser, Arg, Lys, NH2 or is absent; and
Xaa47 is: His, Ser, Arg, Lys, NH2 or is absent; provided that if Xaa2, Xaa 3, Xaa44, Xaa45, Xaa46, or Xaa47 is absent each amino acid downstream is absent and further provided that if Xaa36 is Arg and Xaa37 is Gly or Ser, the GLP-1 peptide does ,not have the following C-terminal amino acid extension beginning at Xaa38 : Ser-Ser-Gly-Ala-Pro-Pro- Pro-Ser-NH2.
22 . The GLP- 1 peptide of Claim 21 wherein
Xaa7 i s L-hi st idine ;
Xaa8 i s Gly or Val ;
Xaaiβ is Phe , Trp , Tyr , l ie , or Leu ;
Figure imgf000039_0001
Xaa25 is Ala
Xaa33 is l ie
Xaa36 i s Gly and
Xaa37 is Pro
23. The GLP-1 compound of Claim 22 wherein Xaaι6 is Trp.
24. The GLP-1 compound of Claim 22 wherein Xaaι6 is Phe
25. The GLP-1 compound of Claim 22 wherein Xaaι6 is Tyr.
26. The GLP-1 compound of Claim 22 wherein Xaa7 is L-histidine;
Xaa8 is Gly or Val; Xaai6 is Val ; Xaa22 is Glu; and Xaa33 is lie.
27. An extended GLP-1 peptide comprising the amino acid . sequence of the formula Xaa7 -Xaa8- Glu -Gly- Thr- Phe -Thr -Ser -Asp -Val -Ser -Ser -
Tyr-Lys-Glu-Xaa22-Gln-Ala-Xaa25-Lys-Glu-Phe-Ile-Ala- Trp-Leu-Xaa33-Lys-Gly-Gly-Pro-Xaa38-Xaa39-Xaa4o-Xaa4ι- Xaa42 -Xaa 3 -Xaa44-Xaa45-Xaa 6 -Xaa47 Formula 4 (SEQ ID NO: 4) wherein:
Xaa7 is: L-histidine, D-histidine, desamino-histidine, 2- amino-histidine, β-hydroxy-histidine , homohistidine, α-f luoromethyl-histidine , or α- methyl -histidine; Xaa8 is: Gly, Val, Leu, lie, Ser, or Thr; Xaa22 is: Gly, Glu, Asp, or Lys; Xaa25 is: Ala, Val, lie, or Leu; Xaa33 is: Val or lie; Xaa38 is: Ser, Pro, or His; Xaa39 is: Ser, Arg, Thr, Trp, or Lys ; Xaa40 is: Ser or Gly;
Xaa i is: Ala, Asp, Arg, Glu, Lys, or Gly; Xaa 2 is: Pro or Ala; Xaa43 is: Pro or Ala; Xaa44 is: Pro, Ala, Arg, Lys, His, NH2, or is absent; Xaa45 is: Ser, His, Pro, Lys, Arg, NH2 or is absent; Xaa46 is: His, Ser, Arg, Lys, NH2 or is absent; and Xaa 7 is: His, Ser, Arg, Lys, NH2 or is absent; provided that if Xaa , Xaa45, Xaa46, or Xaa47 is absent each amino acid downstream is absent.
28. The GLP-1 peptide of Claim 27, wherein Xaa7 is L- histidine, Xaa8 is Val or Gly, and Xaa22 is Glu.
29. The GLP-1 peptide of Claim 27 wherein Xaa7 is L- histidine, Xaa8 is Val or Gly, Xaa22 is Glu, and Xaa33 is lie.
30. The GLP-1 peptide of Claim 27 wherein Xaa7 is L- histidine, Xaa8 is Val or Gly, Xaa22 is Glu, Xaa25 is Val, and Xaa33 is lie.
31. The GLP-1 peptide of Claim 27 wherein Xaa7 is L- histidine, Xaa8 is Val or Gly, Xaa22 is Glu, Xaa33 is lie, Xaa38 is Ser, Xaa39 is Ser, Xaa 0 is Gly, Xaa4i is Ala, Xaa42 is Pro, Xaa43 is Pro, Xaa44 is Pro, Xaa 5 is Ser, and Xaa46 is absent.
32. The GLP-1 peptide of Claim 31 wherein Xaa8 is Val.
33. An extended GLP-1 peptide comprising an amino acid sequence of the formula
Hi s- Ala -Glu -Gly- Thr -Phe -Thr -Ser -Asp -Val -Ser -Ser -Tyr - Leu-Glu-Gly-Gln-Ala-Ala-Lys-Glu-Phe-Ile-Ala-Trp-Leu- Val-Lys-Gly-Gly-Pro-Xaa38-Xaa39-Xaa40-Xaa4i-Xaa42-Xaa43- Xaa44~Xaa 5 -Xaa46-Xaa47 -Xaa48 -Xaa g -Xaaso Formula 5 (SEQ ID NO: 60)
Wherein :
Xaa38 is: Ser, Pro, or His;
Xaa39 is: Ser, Arg, Thr, Trp, or Lys ;
Xaa40 is: Ser or Gly; Xaa ι i s : Ala , Asp , Arg , Glu , Lys , or Gly ;
Xaa42 is: Pro, Ala, NH2, or is absent;
Xaa43 is: Pro, Ala, NH2, or is absent;
Xaa4 is: Pro, Ala, Arg, Lys, His, NH2, or is absent; Xaa45 is: Ser, His, Pro, Lys, Arg, Gly, NH2 or is absent;
Xaa46 is: His, Ser, Arg, Lys, Pro, Gly, NH2 or is absent; and
Xaa47 is: His, Ser, Arg, Lys, NH2 or is absent;
Xaa48 is: Gly, His, NH2 or is absent;
Xaa49 is: Pro, His, NH2 or is absent; and Xaa50 is: Ser, His, Ser-NH2, His-NH2 or is absent; wherein said GLP-1 peptide comprises from one to six further substitutions and provided that if Xaa4 , Xaa43, Xaa44, Xaa45, Xaa6, Xaa47, Xaa48, or Xaa49 is absent each amino acid downstream is absent.
34. The GLP-1 peptide of Claim 33, wherein the further substitution is selected from the group consisting of at least one of the following substitutions:
a) His at position 7 is substituted with D- histidine, desamino-histidine, 2-amino-histidine, β-hydroxy-histidine, homohistidine, - fluoromethyl -histidine , or α-methyl-histidine ; b) Ala at position 8 is substituted with Gly, Val, Leu, lie, Ser, or Thr; c) Phe at position 12 is substituted with Trp, or Tyr; d) Val at position 16 is substituted with Trp, lie, Leu, Phe, or Tyr; e) Ser at position 18 is substituted with Trp, Tyr, Phe, Lys, lie, Leu, or Val; f) Tyr at position 19 is substituted with Trp or Phe; g) Leu at position 20 is substituted with Phe, Tyr, or Trp; h) ' Gly at position 22 is substituted with Glu, Asp, or Lys ; i) Ala at position 25 is substituted with Val, lie, or Leu j) Glu at position 27 is substituted with lie or
Ala; k)' Ala at position 30 is substituted with Glu; 1) al at position 33 is substituted with lie; and m) Lys at position 34 is substituted with Asp, Arg or Glu i
35. The GLP-1 peptide of Claim 34 wherein the further substitution is selected from the group consisting of: a) Ala at position 8 is substituted with Val or Gly; b) Gly at position 22 is substituted with Glu; and c) Val at position 33 is substituted with lie
36. A method of stimulating the GLP-1 receptor in a subject in need of blood glucose normalization, said method comprising the step of administering to the subject an effective amount of the GLP-1 peptide of any one of Claims 1 through 35.
37. The method of Claim 36 wherein the subject is being treated for non-insulin dependent diabetes.
38. A method of treating a subject prophylactically for non-insulin dependent diabetes comprising the step of administering to the subject an effective amount of a GLP-1 peptide of any one of Claims 1 through 35.
39. A method of reducing or maintaining body weight in a subject in need thereof, comprising administering to the subject an effective amount of a GLP-1 compound of any one of Claims 1 through 35.
40. A method of treating obesity in a subject in need thereof, comprising administering to the subject an effective amount of a GLP-1 compound of any one of Claims 1 through 35.
41. A method of treating stroke, myocardial infarction, stress-induced hyperglycemia, or irritable bowel syndrome in a subject in need thereof, comprising administering to the subject an effective amount of a GLP-1 compound of any one of Claims 1 through 35.
42. The use of a GLP-1 compound of any one of Claims 1-35 in the manufacture of a medicament for the treatment of non-insulin dependent diabetes, obesity, stroke, myocardial infarction, stress-induced hyperglycemia, or irritable bowel syndrome.
43. The use of Claim 42 wherein the medicament is used to treat non-insulin dependent diabetes.
44. The use of claim 42 wherein the medicament is used to treat obesity.
45. A process of making a pharmaceutical formulation comprising mixing a GLP-1 peptide of any one of Claims 1 through 35 with a pharmaceutical carrier.
6. A pharmaceutical formulation comprising a GLP-1 compound of any one of Claims 1 through 35 and a pharmaceutical carrier.
PCT/US2003/000001 2002-01-08 2003-01-03 Extended glucagon-like peptide-1 analogs WO2003058203A2 (en)

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PE20030820A1 (en) 2003-10-04
CA2468700A1 (en) 2003-07-17
US7482321B2 (en) 2009-01-27
JP4282485B2 (en) 2009-06-24
AU2003200839B2 (en) 2008-12-11
WO2003058203A3 (en) 2007-02-01
BR0306706A (en) 2007-03-27
AU2003200839A1 (en) 2003-07-24
MXPA04006679A (en) 2004-11-10
EP1585959A4 (en) 2007-11-14
JP2005528337A (en) 2005-09-22
EP1585959A2 (en) 2005-10-19
TW200306202A (en) 2003-11-16
AR038102A1 (en) 2004-12-29
US20060014241A1 (en) 2006-01-19

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