WO2003023380A1 - Assay buffer, compositions containing the same, and methods of using the same - Google Patents
Assay buffer, compositions containing the same, and methods of using the same Download PDFInfo
- Publication number
- WO2003023380A1 WO2003023380A1 PCT/US2002/028803 US0228803W WO03023380A1 WO 2003023380 A1 WO2003023380 A1 WO 2003023380A1 US 0228803 W US0228803 W US 0228803W WO 03023380 A1 WO03023380 A1 WO 03023380A1
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- WIPO (PCT)
- Prior art keywords
- composition
- ecl
- electrochemiluminescence
- buffer
- assay
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- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/48—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving transferase
- C12Q1/485—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving transferase involving kinase
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- G—PHYSICS
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- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/53—Immunoassay; Biospecific binding assay; Materials therefor
- G01N33/573—Immunoassay; Biospecific binding assay; Materials therefor for enzymes or isoenzymes
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- G01N21/00—Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
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- G01N21/76—Chemiluminescence; Bioluminescence
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- G01N33/53—Immunoassay; Biospecific binding assay; Materials therefor
- G01N33/5306—Improving reaction conditions, e.g. reduction of non-specific binding, promotion of specific binding
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- G—PHYSICS
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- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/58—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving labelled substances
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- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
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- G01N33/58—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving labelled substances
- G01N33/582—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving labelled substances with fluorescent label
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- G—PHYSICS
- G01—MEASURING; TESTING
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- G01N2333/00—Assays involving biological materials from specific organisms or of a specific nature
- G01N2333/90—Enzymes; Proenzymes
- G01N2333/91—Transferases (2.)
- G01N2333/912—Transferases (2.) transferring phosphorus containing groups, e.g. kinases (2.7)
- G01N2333/91205—Phosphotransferases in general
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- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
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- G01N2458/40—Rare earth chelates
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- Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
- Y10—TECHNICAL SUBJECTS COVERED BY FORMER USPC
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- Y10S435/967—Standards, controls, materials, e.g. validation studies, buffer systems
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- Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
- Y10—TECHNICAL SUBJECTS COVERED BY FORMER USPC
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- Y10S435/00—Chemistry: molecular biology and microbiology
- Y10S435/968—High energy substrates, e.g. fluorescent, chemiluminescent, radioactive
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- Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
- Y10—TECHNICAL SUBJECTS COVERED BY FORMER USPC
- Y10T—TECHNICAL SUBJECTS COVERED BY FORMER US CLASSIFICATION
- Y10T436/00—Chemistry: analytical and immunological testing
- Y10T436/10—Composition for standardization, calibration, simulation, stabilization, preparation or preservation; processes of use in preparation for chemical testing
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- Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
- Y10—TECHNICAL SUBJECTS COVERED BY FORMER USPC
- Y10T—TECHNICAL SUBJECTS COVERED BY FORMER US CLASSIFICATION
- Y10T436/00—Chemistry: analytical and immunological testing
- Y10T436/10—Composition for standardization, calibration, simulation, stabilization, preparation or preservation; processes of use in preparation for chemical testing
- Y10T436/108331—Preservative, buffer, anticoagulant or diluent
Definitions
- ECL labels include: i) organometallic compounds where the metal is from, for example, the noble metals of group VIII, including Ru-containing and Os-containing organometallic compounds such as the trw-bipyridyl-ruthenium (RuBpy) moiety and ii) luminol and related compounds.
- ECL coreactants Species that participate with the ECL label in the ECL process are referred to herein as ECL coreactants.
- coreactants include tertiary amines (e.g., see U.S. Patent No. 5,846,485, herein incorporated by reference), oxalate, and persulfate for ECL from RuBpy and hydrogen peroxide for ECL from luminol (see, e.g., U.S. Patent No. 5,240,863).
- the light generated by ECL labels can be used as a reporter signal in diagnostic procedures (Bard et al., U.S. Patent No. 5,238,808).
- an ECL label can be covalently coupled to a binding agent such as an antibody, nucleic acid probe, receptor or ligand; the participation of the binding reagent in a binding interaction can be monitored by measuring ECL emitted from the ECL label.
- the ECL signal from an ECL-active compound may be indicative of the chemical environment (see, e.g., U.S. Patent No. 5,641,623 which describes ECL assays that monitor the formation or destruction of ECL coreactants).
- ECL labels, ECL assays and instrumentation for conducting ECL assays see U.S. Patents Nos.
- Multi-well plates having integrated electrodes suitable for such ECL measurements have also been recently disclosed (see, e.g., U.S. Application Nos. 10/185,274 and 10/185,363, entitled “Assay Plates, Reader Systems and Methods for Luminescence Test Measurements", each filed on June 28, 2002 and hereby incorporated by reference). See also, U.S. Application No. , (Entitled:
- pH buffers containing inorganic phosphate are employed in many electrochemiluminescence assays. Applicants have discovered that such pH buffers can, in certain assays, interfere with the assay and decrease the performance of the assay. Accordingly, it would be desirable to find alternative pH assay buffers, compositions containing the same and methods of using the same for use in those assays which are detrimentally effected by pH buffers containing inorganic phosphate. It would also be desirable to find alternative ECL Assay Buffers with improved performance in ECL assays.
- the present invention relates to improved compositions, reagents, kits, systems, system components, and methods for performing assays. More particularly, the invention relates to the use of novel combinations of reagents to provide improved assay performance.
- ECL Assay Buffers that comprise an ECL coreactant and, preferably, a pH buffering agent.
- the ECL Assay Buffers provide a suitable environment for efficiently inducing ECL labels to emit ECL and for sensitively measuring ECL labels via the measurement of ECL.
- the ECL Assay Buffers of the invention may optionally comprise additional components including detergents, preservatives, anti- foaming agents, ECL active species, salts, metal ions and/or metal chelating agents.
- the ECL Assay Buffers of the invention may also include components of a biological assay, which in some cases may be labeled with an ECL label, including binding reagents, enzymes, enzyme substrates, cofactors and/or enzyme inhibitors.
- the invention also includes assay reagents, compositions, kits, systems and system components that comprise the ECL Assay Buffers of the invention and, optionally, additional assay components.
- the invention also includes methods for conducting ECL assays using the ECL Assay Buffers of the invention.
- Another aspect of the invention relates to the use of pH buffers which are substantially free of inorganic phosphates.
- Such buffers in some applications, have been found to significantly improve the performance of ECL measurements.
- Such buffers have also been found to be advantageous in certain applications where phosphate has been found to interfere with a chemical, biochemical or biological reaction.
- the invention includes method, reagents, kits and compositions for measuring phospho-peptides, phospho-amino acids or phospho-protein which use buffer compositions that are free or substantially free (e.g., below the levels that interfere with phospho-specific antibodies).
- Such methods, kits, compositions, and reagents are, preferably, applied to the measurement (most preferably using ECL detection) of protein kinase or phosphorylase activities through the specific measurement of reaction products or substrates.
- Another aspect of the invention relates to compositions and reagents with that give high signal to background ratios in electrochemiluminescence assays.
- Such improved performance has been achieved through the identification of advantageous combinations of ECL coreactants, pH buffers, detergent and pH and, in particular, through the use of ECL coreactants and/or pH buffers other than TPA and phosphate.
- These improved formulations are of particular value in non-wash assays and high sensitivity assays.
- the performance of ECL assays is improved even further through optimal combinations of reagent compositions with electrode compositions.
- compositions and reagents of the invention improve the ratio of ECL signal from bound label to ECL signal from free label. This is particularly true in assays involving reagents immobilized on a solid surface such as an electrode. This is important, for example, in solid phase assays not having a wash step
- the ECL Assay Buffers of the invention provide improved sensitivity at low detection levels by reducing the background electrochemiluminescence in the absence of ECL labels.
- ECL Assay Buffers comprising pH buffering agents other than phosphate or which are substantially free of inorganic phosphate emit less background luminescence than conventional ECL Assay Buffers comprising inorganic phosphate based pH buffers. This is particularly advantages at low detection levels where increasing the signal to background ratio greatly improves the performance of the assay.
- kits comprising the ECL assay buffers, where the reagents include non-phosphate based pH buffering agents, the ECL assay buffers are substantially free of inorganic phosphate and or the ECL assay buffers employ tertiary amine coreactants other than TPA.
- kits containing, in one or more containers, the ECL assay buffer and, preferably also containing one or more other assay components.
- Another aspect of the invention relates to improved methods performed using the present invention, particularly assay methods employing phospho-specific antibodies, low detection limits, immobilized reagents and/or a non-wash formats.
- Yet another aspect of the invention relates to improved systems and apparatus containing the compositions or reagents of the invention and/or improved systems and apparatus adapted to perform the improved methods of the invention.
- Figure 1 compares the rates of dissociation of a phosphopeptide - antiphosphopeptide complex in three different ECL Assay Buffers that comprise different pH buffering agents.
- Figure 2 shows the rate of dissociation of a phosphopeptide - antiphosphopeptide complex in an
- ECL Assay Buffer that comprises TPA as an ECL coreactant and Tris as a pH buffering agent. The complex was not washed to remove free antibody prior to addition of the ECL Assay Buffer.
- Figure 3 is a graphical representation of an end-product stability study comparing the dissociation rate of an anti-phosphotyrosine antibody from autophosphorylated EGF receptor in two different ECL Assay Buffers: 150mM TPA/150mM Phosphate and lOOmM TPA/400mM glycyl- glycine. The concentration of the labeled ⁇ -phosphotyrosine antibody was 6.7nM.
- Figure 4 compares the performance of four different ECL Assay Buffers in the ECL measurement of a labeled reagent that was immobilized on the surface of an unetched ( Figure 4A) or plasma etched ( Figure 4B) carbon ink electrode.
- the figure shows the signals from surface bound reagent, the background signal measured in the absence of the bound reagent and the signal to background ratio (SIB).
- Figure 5 compares the performance of four different ECL Assay Buffers in the ECL measurement of a labeled reagent that was immobilized on the surface of an unetched ( Figure 5 A) or plasma etched ( Figure 5B) carbon ink electrode.
- the figure shows the signals from surface bound reagent, the background signal measured in the absence of the bound reagent and the signal to background ratio (S/B).
- the figure also shows the signal obtained when a non-surface bound labeled reagent was introduced into the ECL Assay Buffers and the ratio of the signals from the surface bound and non-surface bound reagents (B/F).
- Figure 6 compares the effect of three different detergents on the ECL signal from a labeled reagent that was immobilized on the surface of a plasma etched carbon ink electrode.
- the detergents were introduced into an ECL Assay Buffer comprising TPA and phosphate (Figure 6A) or PIPES and phosphate ( Figure 6B).
- the figure shows the signals from surface bound reagent, the background signal measured in the absence of the bound reagent and the signal to background ratio (S/B).
- Figure 7 compares the effect of five different detergents on the ECL signal from a labeled reagent that was immobilized on the surface of a non-etched carbon ink electrode.
- the detergents were introduced into four different ECL Assay Buffers differing in the identity of the ECL coreactant or pH buffering agent.
- the figure shows the signals from surface bound reagent, the background signal measured in the absence of the bound reagent and the signal to background ratio (S/B).
- ECL-active species may be referred to as an ECL moiety, ECL label, ECL label compound or ECL label substance, etc.
- ECL- active species when utilized in certain of the composition, reagent, kit, method, or system embodiments in accordance with the invention ⁇ to be linked to other molecules and, in particular, to components of biochemical or biological assays, e.g., an analyte or an analog thereof, a binding partner of the analyte or an analog thereof, a further binding partner of such aforementioned binding partner, or a reactive component capable of binding with the analyte, an analog thereof or a binding partner as mentioned above.
- the above-mentioned species can also be linked to a combination of one or more binding partners and/or one or more reactive components.
- an ECL-active species may be linked to an enzyme substrate.
- composition hereinafter sometimes an "ECL, composition”, or a “system” to contain unstable, metastable and other intermediate species formed in the course of the ECL reaction, such as an ECL moiety in an excited state as aforesaid and the above-mentioned strong reducing agent.
- ECL composition the composition (hereinafter sometimes "ECL composition") or system to emit other types of electromagnetic radiation, such as infrared or ultraviolet light, X-rays, microwaves, etc.
- ECL assay buffers Assay compositions containing the same, and methods of using the same.
- phosphate based ECL assay buffer of the prior art As stated above, several disadvantages were discovered when using the phosphate based ECL assay buffer of the prior art.
- the assay involved i) the kinase- dependent phosphorylation of a peptide immobilized on a carbon electrode; ii) the specific binding of a labeled (with a derivative of Ru(bpy) 3 ) phospho-specific antibody; iii) the addition of the ECL coreactant tripropylamine (TPA) and iv) the detection of ECL from the bound label (see, e.g., Example A below).
- TPA ECL coreactant tripropylamine
- the pH buffer is free of inorganic buffer.
- the phosphate-free ECL assay buffers of the invention are not only beneficial when applied to phosphopeptide binding assays but have other beneficial properties (including lower background signals) that may improve a wide range of ECL assays.
- ECL assay buffer background reducing agents that, when introduced into ECL assay buffers reduce ECL assay buffer background and improve assay performance. These agents are, preferably, also pH buffering agents, most preferably, GlyGly or Tris.
- ECL assay buffers that employ ECL coreactants other than the traditional TPA.
- coreactants have been discovered to generate ECL signals that are comparable to those generated with TPA.
- ECL coreactants other than TPA have been found to improve the performance of non-washed ECL assays through their improved ability, relative to TPA, to discriminate between ECL labels that are held in proximity to an electrode and labels that are free in solution.
- coreactants other than TPA has additional benefits due to the higher water solubility and lower vapor pressure of some of the new coreactants that have been identified.
- one aspect of the invention relates to improved ECL Assay Buffers that comprise an ECL coreactant and, preferably, a pH buffering agent.
- the ECL Assay Buffers provide a suitable environment for efficiently inducing ECL labels to emit ECL and for sensitively measuring ECL labels via the measurement of ECL.
- the ECL Assay Buffers of the invention may optionally comprise additional components including detergents, preservatives, anti-foaming agents, ECL active species, salts, metal ions and or metal chelating agents.
- the ECL Assay Buffers of the invention may also include components of a biological assay, which in some cases may be labeled with an ECL label, including binding reagents, enzymes, enzyme substrates, cofactors and/or enzyme inhibitors.
- the ECL assay buffers of the invention are aqueous or substantially aqueous in nature, although it may be desirable in some applications to add organic cosolvents such as DMSO, DMF, methanol, ethanol or other alcohols.
- an ECL assay buffer (or one or more components thereof) is provided in dry form and the user forms the ECL assay buffer solution by addition of the appropriate solvent or matrix (preferably a water or an aqueous medium).
- ECL assay buffer containing tri-n-propylamine (TPA) as a coreactant and phosphate as a pH buffering agent.
- TPA tri-n-propylamine
- Applicants have discovered that in some applications, certain functionalized tertiary alkylamines can provide performance that is comparable or better to TPA. These functionalized tertiary amines are especially useful in assays employing carbon-based electrodes (e.g., electrodes comprising carbon particle or carbon nanotubes including composite materials such as plastics and inks) and/or assay reagents (such as binding reagents) that are immobilized onto electrodes.
- carbon-based electrodes e.g., electrodes comprising carbon particle or carbon nanotubes including composite materials such as plastics and inks
- assay reagents such as binding reagents
- the functionalized tertiary alkylamines of the invention preferably, have one or more of the following properties: i) they are oxidized on carbon-based electrodes in a one electrode oxidation to give an amine radical cation which can subsequently lose a proton to form a radical reductant (Scheme 1); ii) they have an oxidation potential on carbon-based electrodes that is comparable (within 150 mV) or greater than that of Ru(II)(bpy) ; iii) they can be oxidized, most preferably at a pH between 6 and 9, at a potential less than that required to breakdown water at a carbon-based electrode; iv) the energy released by the reaction of the radical reductant with Ru(III)(bpy)3 to produce Ru(II)(bpy)3 is sufficient to produce Ru(II)(bpy)3 in a luminescent excited state and v) the lifetimes of the amine radical cation and/or radical reductant are less than
- the diffusion distance of the amine radical cation and/or radical reductant is less than 1 ⁇ m, more preferably, ⁇ 500 nm, even more preferably less than 100 nm, even more preferably less than 50 nm and most preferably ⁇ 10 nm.
- the high selectivity between free and bound labels has led to improved sensitivity in non- washed ECL assay formats.
- the ratio of signal from bound label and free label may improved by replacing TPA with a non-TPA coreactant of the invention. This improvement is preferably greater than a factor of 2, more preferably greater than a factor of 5 and most preferably greater than a factor of 10.
- the functionalized tertiary amine coreactants of the invention preferably have the structure NR'R 2 R 3 , wherein R 1 , R 2 and R 3 are alkyl groups comprising at least 2, preferably 3, carbons and wherein one or more of R , R and R are functionalized with a hydrophilic functional group, more preferably a charged group, most preferably a negatively charge group.
- Preferred functional groups include hydroxyl, dialkylamino, sulfate, sulfonate, carboxylate and carboxylic acid ester.
- Especially preferred coreactants include compounds with the structure (n-Pr) 2 N(CH 2 ) n R, wherein n is greater than or equal to 2 (more preferably 3), and R is a hydrophilic functional group as defined above, preferably, carboxylate, dialkylamino (more preferably dipropylamino) or most preferably sulfonate.
- Other preferred coreactants include compounds with the structure
- X is -(CH 2 )- or a heteroatom, preferably -O-, -S-, or -N(R')-;
- R and R 1 are alkyl groups comprising 2 or more (preferably 3 or more) carbons;
- iii) n and m are each greater than or equal to 1 and are preferably two and
- R (and, optionally R 1 ) comprise a hydrophilic functional group as defined above.
- R is -(CH 2 ) n -F 1 , wherein n is greater than or equal to 3 and F 1 is a hydrophilic functional group, preferably, carboxylate or sulfonate.
- R is, most preferably, -(CH2) n -F , wherein n is greater than or equal to 3 and F 1 is H, alkyl, or a hydrophilic functional group, most preferably, carboxylate or sulfonate.
- F 1 is H, alkyl, or a hydrophilic functional group, most preferably, carboxylate or sulfonate.
- Additional coreactants include proline, peptides having an N-terminal proline.
- the proline is N-alkylated to form a tertiary amine.
- coreactants having hydrophilic functional groups and, in particular, coreactants that are zwitterionic at neutral pH
- coreactants having hydrophilic functional groups and, in particular, coreactants that are zwitterionic at neutral pH
- These species tend to be highly water soluble and to have low vapor pressure. For these reasons it is possible to produce highly concentrated stock solutions that may be diluted as necessary for use. It is also possible prepare dried reagents comprising the coreactants without uncertainty due to loss of coreactant in the vapor phase. Furthermore, when present in dried reagents, these coreactants resolubilize quickly in a minimum of volume.
- ECL assay buffers optimized for use with commercial ECL instruments have typically comprised TPA in a phosphate-based pH buffer. These formulations have been especially useful for conducting solid phase assays employing magnetic particles that are captured on an electrode. Applicants have discovered that in some applications, other pH buffering agents (including organic pH buffers) can provide performance that is comparable or better to phosphate. These non-phosphate pH buffers (and pH buffer solutions and ECL assay buffers comprising these buffers are especially useful in assays employing carbon-based electrodes (e.g., electrodes comprising carbon particle or carbon nanotubes including composite materials such as plastics and inks) and/or assay reagents (such as binding reagents) that are immobilized onto electrodes.
- carbon-based electrodes e.g., electrodes comprising carbon particle or carbon nanotubes including composite materials such as plastics and inks
- assay reagents such as binding reagents
- ECL assay buffers employing the non-phosphate buffers of the invention have less than 15 mM inorganic phosphate, more preferably they have less than 5 mM inorganic phosphate, even more preferably they have less than 1 mM phosphate, even more preferably they are substantially free of inorganic phosphate, most preferably they are free of inorganic phosphate.
- the pH buffering agent preferably, is not oxidized under the conditions used to generate ECL and do not interfere with the generation of ECL.
- Tris tris-(hydroxymethyl)aminomethane
- oligo(glycines) preferably glycyl-glycine
- Gly-Gly glycyl-glycine
- Applicants have discovered that ECL assays on carbon-based electrodes using TPA/Tris or TPA/Gly-Gly ECL assay buffers have comparable signals from electrode-bound ECL labels as those observed with conventional TP A/phosphate buffers.
- the background signals in the absence of ECL labels are considerably less with the Tris and Gly-Gly buffers. This reduction in the background signal leads to an increase in the ratio of signal to background (S/B) and an increase in the sensitivity of ECL assays using the new formulations.
- the ECL assay buffers of the invention have S/B ratios that are 2-fold, more preferably 5 -fold and, most preferably, 10-fold better than those obtained using phosphate- based systems.
- the improved performance of the Tris and Gly-gly based ECL assay buffers is related to an ability of the buffering agents to act as ECL assay buffer reducing agents by reacting with and destroying tertiary amine oxidation products and/or other reactive oxidized species (e.g., amine radical cations and radical reductants) that are responsible for the assay buffer background.
- tertiary amine oxidation products and/or other reactive oxidized species e.g., amine radical cations and radical reductants
- Tris and Gly-gly buffers may also improve the observed bound to free ratios, although this effect is less than that observed by switching to non-TPA buffers such as PIPES.
- Applicants have found that the Tris and Gly-gly buffering systems are also suitable for use with non-TPA coreactants such as PIPES.
- coreactants such as PIPES that may act as pH buffers, it may be possible to omit additional buffering agents.
- Applicants have discovered that the presence or absence of detergents can have a surprisingly large effect on ECL signals.
- the nature of this effect is, unexpectedly, dependent on the electrode.
- oxidized electrodes e.g., plasma-oxidized carbon inks or plasma oxidized polymer composites containing carbon particles or carbon nanotubes
- TPA- containing ECL assay buffers the effect appears to be relatively small except in the case of phenyl ether containing detergents such as the Triton and Nonidet series of detergents (e.g., Triton X-100).
- a common method for generating ECL is through the use of a ramp potential. In general a plot of ECL intensity vs. applied potential has the form of a peak.
- ECL increases as the oxidation potentials of the label and coreactant are approached. On scanning past this potential, the ECL intensity eventually begins to drop as the coreactant is consumed and water oxidation begins to occur.
- phenyl ether containing detergents leads to the addition of a small ECL peak at higher potential than the main ECL peak. This peak occurs at a potential similar to the an oxidation wave observed with pure Triton X- 100, thus leading applicants to speculate that the new peak is associated with the oxidation of the detergent (or an associated impurity) and the participation of the oxidation products in an ECL reaction.
- the behavior on non-oxidized carbon-based electrodes is very different.
- the ECL signal in the presence of TPA-containing buffers is drastically improved by the addition of detergent.
- This effect appears to be relatively independent of the nature of the detergent (although non-ionic detergents are preferred due to their relatively weak ability to denature biological systems), but requires the concentration of detergent to be roughly equal to or greater than the critical micellar concentration (cmc) of the detergent.
- the addition of detergent to an ECL assay buffer leads to an improvement in assay signal or S/B (preferably induced with a carbon-based electrode, most preferably a carbon-ink electrode) of greater than a factor of 2, more preferably greater than a factor of 5 and most preferably greater than a factor of 10.
- non-TPA containing ECL assay buffers and, in particular, non-TPA containing ECL assay buffers appear to be less dependent on the nature of a carbon electrode.
- PIPES phenyl ether containing substances, and, in particular, phenyl ether containing detergents.
- a non-TPA based ECL assay buffer preferably, a PIPES-based ECL assay buffer
- S/B preferably induced with a carbon-based electrode, most preferably a carbon-ink electrode
- assays e.g., assays involving detergent sensitive components such as biological membranes
- the various detergent containing formulations of the invention may also be prepared in low detergent or detergent-free forms for these detergent sensitive applications.
- assays employing detergent sensitive components employ ECL Assay Buffers containing one of the following coreactants: TPA, N,N- bis-(hydroxyethyl)-N-4-aminobutanesulfonic acid, or A 2 N-(CH 2 ) consult-NB 2 , where A and B are alkyl groups (preferably, propyl) and n is an integer (preferably 3 or 4, most preferably, 3).
- the preservative may be beneficial when storing ECL assay buffers to include a preservative that prevents microbial growth.
- the preservative has little or no effect on ECL generated using the ECL assay buffer, especially when using the ECL assay buffer on a carbon based electrode.
- Azide has been found to be a suitable preservative.
- Isothiazolones e.g., Kathon, 2- methyl-4-isothiazolin-3-one and 5-chloro-2-methyl-4-isothiazolin-3-one
- oxazolidines e.g., Oxaban A or 4,4 dimethyl oxazolidine
- related preservatives are especially preferred due their compatibility with ECL, their high activity and the low degree of problems associated with safety hazards or environmental concerns.
- anti-foaming agents it may be beneficial, especially in HTS applications, to avoid the production of bubbles or foam. For this reason it may be desirable to add anti-foaming agents to ECL assay buffers. Applicants have found that many commercial anti-foaming agents (including Antifoams o-30, Antifoam 204, Antifoam A, Antifoam SE-15, Antifoam SO-25 and Antifoam 289) may be added to ECL assay buffers without significantly affecting the performance of the ECL assay buffers.
- the compositions of the invention may include ECL labels.
- the ECL labels may be conventional ECL labels.
- ECL labels include: i) organometallic compounds where the metal is selected from, for example, the noble metals of group VIII, including Ru-containing and Os-containing organometallic compounds such as the tr ⁇ -bipyridyl-ruthenium (RuBpy) moiety and ii) luminol and related compounds.
- the ECL labels are capable of repeatedly emitting electrochemiluminescence.
- Preferred ECL labels are ruthenium or osmium- containing organometallic species.
- these ruthenium or osmium-containing organometallic comprise ruthenium or osmium chelated to polypyridyl ligands (most preferably, bipyridine, phenanthroline, and or substituted derivatives thereof).
- the ECL labels comprise ruthenium-tr ⁇ -bipyridine, the bipyridine ligands being, optionally substituted, e.g., with a linking group for attaching the label to an assay reagent.
- the ECL label may be linked to an assay reagent, optionally through a linking group.
- binding reagents that may be linked to an ECL label include: whole cells, cell surface antigens, subcellular particles (e.g., organelles or membrane fragments), viruses, prions, dust mites or fragments thereof, viroids, antibodies, antigens, haptens, fatty acids, nucleic acids (and synthetic analogs), proteins (and synthetic analogs), lipoproteins, polysaccharides, inhibitors, cofactors, haptens, cell receptors, receptor ligands, lipopolysaccharides, glycoproteins, peptides, polypeptides, enzymes, enzyme substrates, enzyme products, second messengers, cellular metabolites, hormones, pharmacological agents, synthetic organic molecules, organometallic molecules, tranquilizers, barbiturates, alkaloids, steroids, vitamins, amino acids, sugars, lectins, recombinant or derived proteins, biotin, avidin, streptavidin.
- the assay reagents are preferably useful as binding reagent
- compositions comprising the ECL assay buffers of the invention.
- compositions suitable for use in an assay comprising a pH buffer substantially free of inorganic phosphate.
- Suitable pH buffers include glycylglycine ("Glygly”), tris(hydroxymethyl)aminomethane (“Tris”) or combinations thereof.
- Glygly glycylglycine
- Tris tris(hydroxymethyl)aminomethane
- Other pH buffers which are also substantially free of or do not contain inorganic phosphate would also be suitable for use in the invention.
- the composition comprises a pH buffer, wherein the composition is, preferably, substantially free of inorganic phosphate and, preferably further comprises one or more ECL co-reactants (preferably, TPA or alternatively, a non-TPA coreactant, more preferably an N-substituted morpholine or piperazine, most preferably PIPES).
- ECL co-reactants preferably, TPA or alternatively, a non-TPA coreactant, more preferably an N-substituted morpholine or piperazine, most preferably PIPES.
- the composition is free of inorganic phosphate.
- Suitable pH buffers include glygly and tris.
- Additional buffers may be selected on the basis of certain preferred characteristics: i) the ability to buffer in the pH range of 6.5-8.5, preferably 7-8 (more preferably, the pKa of the buffer is in the range of 6.5 to 8.5 or more preferably, from 7.5 to 8.5); ii) commercial availability at low cost; iii) the lack of an inhibitory effect on ECL and or iv) the lack of a significant oxidation wave in the range of 0-1.2 V or more preferably 0-1.5 V (the voltage window for the oxidation of Ru(bpy) 3 and TPA).
- the composition comprises a non- phosphate pH buffering agent and, preferably further comprises one or more ECL co-reactants (preferably, TPA or alternatively, a non-TPA coreactant, more preferably an N-substituted morpholine or piperazine, most preferably PIPES).
- ECL co-reactants preferably, TPA or alternatively, a non-TPA coreactant, more preferably an N-substituted morpholine or piperazine, most preferably PIPES.
- the composition has less than 15 mM inorganic phosphate , more preferably it has less than 5 mM inorganic phosphate, even more preferably it has less than 1 mM phosphate, even more preferably it is substantially free of inorganic phosphate, most preferably it is free of inorganic phosphate.
- Suitable pH buffers include glygly and tris.
- Additional buffers may be selected on the basis of certain preferred characteristics: i) the ability to buffer in the pH range of 6.5-8.5, preferably 7-8 (more preferably, the pKa of the buffer is in the range of 6.5 to 8.5 or more preferably, from 7.5 to 8.5); ii) commercial availability at low cost; iii) the lack of an inhibitory effect on ECL and/or iv) the lack of a significant oxidation wave in the range of 0-1.2 V or more preferably 0-1.5 V (the voltage window for the oxidation of Ru(bpy) 3 and TPA).
- the ECL co-reactant used in these embodiments is suitable for use in an electrode induced luminescence reaction (e.g., electrochemiluminescence).
- Suitable ECL co- reactants include tripropylamine (TPA).
- TPA tripropylamine
- Non-TPA coreactants preferably, tertiary amines other than TPA as described in the coreactants section above
- TPA tripropylamine
- the composition comprises between 10 and 2000 mM pH buffer, more preferably 50 and 1200 mM, even more preferably between 100 and 600 mM, and most preferably between 300 and 500 mM.
- the composition comprises between 10 and 1000 mM, ECL co-reactant, more preferably 30 and 600 mM, even more preferably between 50 and 200 mM, and most preferably between 75 and 150 mM.
- the optimal range of TPA concentrations in the pH buffers containing Tris and Gly-Gly is very similar to concentrations of ORIGEN® buffer (i.e., ranging from 50 - 200 mM).
- the tested range of concentrations of Tris and Gly-Gly buffers is 100 - 600 mM.
- the concentration is 200 mM.
- PIPES PIPES
- PIPES PIPES
- coreactant concentrations may include similar ranges of coreactant concentrations, although in many applications the preferred range is 10-100 mM, most preferably 20-50 mM.
- the formulation also comprises 0.2%-2% Triton X-100 and/or 20-500 mM salt.
- the formulation also comprises 0.2%-2% Triton X-100. and/or 20-500 mM salt.
- the final formulation for the PIPES/Phos buffer is: 40-1000 mM phosphate (preferably, potassium phosphate), 10-200 mM PIPES, at pH
- the formulation also comprises 0.2%-2% Triton X-100.
- Tris and Gly-Gly assay buffers significantly improved the stability of phosphopeptide-anti-phosphopeptide complexes in ECL-based Tyrosine Kinase assays.
- the composition further comprises a stop reagent (i.e., a reagent added to stop a reaction or reduce interference with a reaction).
- a stop reagent i.e., a reagent added to stop a reaction or reduce interference with a reaction.
- Chelating agents such as ethylenediaminetetraacetic acid (EDTA) are common stop reagents in Mg- dependent kinase assays. EDTA binds Mg 2+ ions that are require for successful activation of
- Gly-Gly/TPA buffer for example, helps to stop residual tyrosine kinase enzymatic activity.
- Dissociation of phosphopeptide-anti- phosphopeptide complexes in Gly-Gly/TPA buffer with 5 mM EDTA does not exceed 1% per 1 hour in a non- washed assay format.
- EDTA may have a negative effect on absolute value of ECL signal, but does not compromise stability of ECL signal upon incubation in assay buffer.
- desired final read volume in 96-weIl plates 100 ⁇ l or 250 ⁇ l
- the type of assay (washed or non-washed) formulation of Gly-Gly/TPA solution may be different.
- the composition has a pH ranging from 6 to 9, more preferably from 7 to 8, even more preferably from 7.5 to 8 and most preferably about 7.8.
- the pH is adjusted by addition of an acid or base, preferably KOH, more preferably 10% KOH.
- glycylglycine Gly-Gly
- TPA tripropylamine
- the assay buffer further comprises EDTA (preferably 1 to 10 mM, more preferably 5 mM).
- the assay buffer has a pH ranging from 6 to 9, more preferably from 7 to 8, even more preferably from 7.5 to 8 and most preferably about 7.8.
- the pH is adjusted by addition of an acid or base, preferably KOH, more preferably 10% KOH.
- Tris tris[hydroxymethyl)aminomethane
- tripropylamine preferably from 0.01 M to 0.3 M, more preferably from
- the assay buffer further comprises ethylenediaminetetraacetic acid (EDTA), preferably 1 to 10 mM, more preferably 5 mM.
- EDTA ethylenediaminetetraacetic acid
- the composition has a pH ranging from 6 to 9, more preferably from 7 to 8, even more preferably from 7.5 to 8 and most preferably about 7.8.
- the pH is adjusted by addition of an acid or base, preferably KOH, more preferably 10% KOH.
- ECL assay buffers comprising coreactants other than TPA, preferably trialkylamines presenting hydrophilic functional groups (as described in the coreactants section).
- coreactant is PPA or PIPES, most preferably PIPES.
- concentration of coreactant is, preferably, between 10 and 800 mM, most preferably between 10 and 200 mM, most preferably between 20 and 50 mM.
- the ECL assay buffer also comprises a pH buffering agent, preferably, phosphate, Tris or Gly-Gly.
- the concentration of the pH buffering agent is preferably between 0 and 800 mM, more preferably between 0 and 400 mM, even more preferably between 20 and 200 mM and most preferably between 75 and 150 mM.
- the composition has a pH ranging from 6 to 9, more preferably from 7 to 8, even more preferably from 7.2 to 7.8 and most preferably about 7.5.
- the ECL assay buffer also includes a substance with a phenyl ether moiety and/or a detergent, preferably a non-ionic detergent, even more preferably a phenyl ether containing detergent, most preferably Triton X-100.
- the concentration of detergent is greater than 0.02%, more preferably greater than 0.05 %, most preferably between 0.05 and 0.5%.
- the reagents or compositions of the invention further comprise one or more detergents and/or surfactants (e.g., classes of non-ionic detergents/surfactants known by the trade names of Nonidet, Brij, Triton, Tween, Thesit, Lubrol, Genapol, Pluronic, Tetronic, F108, and Span).
- Especially preferred detergents include: Tween 20, Triton X-100, NP-40 and Thesit.
- reagent compositions comprising the assay buffers described above in concentrated form.
- the reagent compositions can be diluted, preferably with an aqueous solution, to result in an assay buffer having the optimal concentration of ingredients for use in an assay, preferably an ECL assay.
- dry reagent precursor comprising one of the above described assay buffers in dry form.
- the dry reagent precursor can be combined with a solution, preferably with an aqueous solution, to result in an assay buffer solution having the optimal concentration of ingredients for use in an assay, preferably an ECL assay.
- Another aspect of the invention relates to a reagent containing one or more pH buffers substantially free of inorganic phosphate suitable for use in providing a composition for conducting an assay, preferably a luminescence assay, more preferably a chemiluminescence assay or an electrode induced luminescence assay, and most preferred an electrochemiluminescence assay.
- an assay preferably a luminescence assay, more preferably a chemiluminescence assay or an electrode induced luminescence assay, and most preferred an electrochemiluminescence assay.
- a reagent containing one or more ECL assay background reducing agents suitable for use in providing a composition for conducting an assay, preferably a luminescence assay, more preferably a chemiluminescence assay or an electrode induced luminescence assay, and most preferred an electrochemiluminescence assay.
- the reagent has less than 15 mM inorganic phosphate, more preferably it has less than 5 mM inorganic phosphate, even more preferably it has less than 1 mM phosphate, even more preferably it is substantially free of inorganic phosphate, and most preferably it is free of inorganic phosphate.
- the reagent comprises an ECL assay buffer reducing agent (preferably, a non-phosphate pH buffering agent) and/or is substantially free of inorganic phosphate, and the reagent is suitable for use in providing a composition for conducting an ECL assay wherein electromagnetic radiation is emitted by an assay composition comprising members selected from the group consisting of:
- a metal-containing ECL moiety capable of being converted to an excited state from which electromagnetic radiation
- an ECL co-reactant preferably an amine or an amine moiety, most preferably a tertiary amine, most preferably TPA which when oxidized forms a strong reducing agent
- said reagent comprises said pH buffer, said ECL co-reactant and one of the other two members of said group (i)-(iii).
- Another aspect of the invention relates to assay compositions comprising one or more binding reagents, enzymes and/or substrates and the pH buffer of the invention.
- compositions, reagents, kits and methods for carrying out protein kinase and phosphorylase assays and/or for measuring phospho-peptides, phospho-proteins, and phospho-amino acids relate to a composition comprising a pH buffer and a phospho-peptide specific antibody, where the composition is substantially free of inorganic phosphate.
- the composition is free of inorganic phosphate.
- the composition further comprises a phosphopeptide, phosphoamino acid and or phosphylated protein that binds the phospho-peptide specific antibody.
- the pH buffer is selected from the group consisting of glycylglycine, tris[hydroxymethyl)aminomethane or combinations thereof.
- the composition further comprises one or more components selected from the group consisting of kinases and kinase substrate.
- the compositions comprise or one or more components selected from the group consisting of phosphatase and phosphatase substrate.
- the composition has a pH between 6 to 9, preferably between 7 to 8, more preferably from 7.5 to 8, and most preferred about 7.8.
- the composition further comprises one or more ECL co-reactants.
- the ECL co-reactant comprises an amine or an amine moiety. More preferably, the ECL co-reactant comprises tripropylamine (TPA).
- the composition further comprises a stop reagent.
- the stop reagent comprises ethylenediaminetetraacetic acid (EDTA).
- the composition further comprises an acid or base, preferably KOH.
- the reagents or compositions of the invention further comprises one or more detergents and/or surfactants (e.g., classes of non-ionic detergents/surfactants known by the trade names of Brij, Triton, Tween, Thesit, Lubrol, Genapol, Pluronic, Tetronic, F108, and Span).
- the composition comprises an inhibitor and/or an enzyme, more preferably an inhibitor to and/or an enzyme for a phosphorylating or dephosphorylating reaction.
- compositions comprising a pH buffer and an ECL co-reactant, said composition being substantially free of inorganic phosphate.
- the composition is free of inorganic phosphate.
- the pH buffer is selected from the group consisting of glycylglycine, tris[hydroxymethyl)aminomethane or combinations thereof.
- the composition comprises one or more components selected from the group consisting of kinases and kinase substrate or one or more components selected from the group consisting of phosphatase and phosphatase substrate.
- the composition has a pH between 6 to 9, preferably between 7 to 8, more preferably from 7.5 to 8, and most preferred about 7.8.
- the ECL co-reactant comprises an amine or an amine moiety. More preferably, the ECL co-reactant comprises tripropylamine (TPA).
- the composition further comprises a stop reagent.
- the stop reagent comprises ethylenediaminetetraacetic acid (EDTA).
- the composition further comprises an acid or base, preferably KOH.
- the composition comprises an inhibitor and/or an enzyme, more preferably an inhibitor to and/or an enzyme for a phosphorylating or dephosphorylating reaction.
- the pH buffer is glycylglycine and said composition further comprises ethylenediaminetetraacetic acid (EDTA) and TPA.
- EDTA ethylenediaminetetraacetic acid
- the composition also further comprises KOH and/or an ECL moiety.
- a reagent comprising a pH buffer, wherein said pH buffer is substantially free of inorganic phosphate and said reagent is suitable for use in providing a composition for conducting an ECL assay wherein electromagnetic radiation is emitted by an assay composition comprising members selected from the group consisting of:
- an ECL co-reactant which when oxidized forms a strong reducing agent; and (iii) an electrolyte capable of functioning as a medium in which said ECL moiety and said amine or amine moiety can be oxidized.
- the reagent further comprises said pH buffer, the ECL co-reactant (preferably an amine or amine moiety) and one of the other two members of said group (i)-(iii).
- the ECL co-reactant preferably an amine or amine moiety
- a reagent comprising a pH buffer, wherein said pH buffer is substantially free of inorganic phosphate and said reagent is suitable for use in providing a composition for conducting an ECL assay wherein electromagnetic radiation is emitted by an assay composition comprising members selected from the group consisting of:
- a metal-containing ECL moiety capable of being converted to an excited state from which electromagnetic radiation is emitted;
- an ECL co-reactant which when oxidized forms a strong reducing agent, wherein said ECL co-reactants is an amine or an amine moiety (preferably TPA); and
- a reagent selected from the group consisting of phosphorylating enzyme, a substrate to a phosphorylating enzyme or combinations thereof;
- composition is substantially free of, preferably free of inorganic phosphate.
- the composition also comprises an ECL co-reactant (e.g., TPA).
- ECL co-reactant e.g., TPA
- kits comprising, in one or more containers, one or more components of the ECL assay buffers of the invention. These components may be combined, optionally with additional reagents, to form the ECL assay buffers of the invention.
- the kits may also comprise additional assay related components such as ECL labels, ECL labeled assay reagents, enzymes, binding reagents, electrodes, assay plates, etc.
- kits containing, in one or more containers, one or more ECL assay buffers that contain a trialkylamine coreactant of the invention other than TPA.
- the kit is contained in one or more glass or plastic containers, appropriately labeled with information regarding the buffer contents and instructions regarding proper storage and use in assay.
- Some or all of the components of the ECL assay buffer may be stored in a dry state.
- the kits may further comprise other assay related components such as enzymes, binding reagents, electrodes, assay plates, etc.
- kits containing, in one or more containers, one or more ECL assay buffers that are substantially free of inorganic phosphate and/or comprise ECL assay buffer reducing agents (preferably, non-phosphate pH buffering agents).
- the kit is contained in one or more glass or plastic containers, appropriately labeled with information regarding the buffer contents and instructions regarding proper storage and use in assay.
- Some or all of the components of the ECL assay buffer may be stored in a dry state.
- the kits may further comprise other assay related components such as ECL labels, ECL labeled assay reagents, enzymes, binding reagents, electrodes, assay plates, etc.
- Gly-Gly/TPA buffer No formal study on shelf-life stability of Gly-Gly/TPA buffer has been performed. However, using 3 - 4 month old assay buffer did not affect assay performance. Applicants believe that the same precautions should be used for Gly-Gly stability, for example, as for ORIGEN assay buffer.
- concentrations of divalent ions in the solution are kept below the ⁇ M level.
- the kit is adapted or suitable for performing an ECL assay wherein electromagnetic radiation emitted by a composition is detected, which kit contains, in one or more containers, a pH buffer and the kit is, preferably, substantially free of inorganic phosphate and or comprises an ECL assay buffer reducing agent (preferably, a non-phosphate pH buffering agent).
- a pH buffer preferably, substantially free of inorganic phosphate and or comprises an ECL assay buffer reducing agent (preferably, a non-phosphate pH buffering agent).
- This kit also comprises at least one other component selected from the group consisting of: (i) a metal-containing ECL moiety capable of being converted to an excited state from which electromagnetic radiation is emitted; (ii) an ECL co-reactant (preferably an amine or an amine moiety) which when oxidized forms a strong reducing agent; and (iii) an electrolyte capable of functioning as a medium in which said ECL moiety and said ECL co-reactant (e.g., amine or amine moiety) can be oxidized, said kit comprising at least one separate component in which one or more members of the group consisting of said ECL moiety (i), ECL co-reactant (ii), and electrolyte (iii) is included.
- a metal-containing ECL moiety capable of being converted to an excited state from which electromagnetic radiation is emitted
- an ECL co-reactant preferably an amine or an amine moiety
- an electrolyte capable of functioning as a medium in which
- kits for use in conducting assays comprising, in one or more containers, one or more pH buffers substantially free of inorganic phosphate and at least one assay component selected from the group consisting of: (a) at least one luminescent label (preferably electrochemiluminescent label); (b) at least one ECL co-reactant; (c) one or more phospho- specific binding reagents; (d) one or more electrodes and/or magnetic beads; (e) one or more blocking reagents; (f) preservatives; (g) stabilizing agents; (h) enzymes; (i) detergents; (j) desiccants and/or (k) hygroscopic agents.
- the kit comprises the assay module having one or more assay electrodes, preferably an assay plate, more preferably multi-well assay plates and the assay component(s) in one or more, preferably two or more, more preferably three or more containers according to U.S. Application Nos. 10/185,274 and 10/185,363, entitled “Assay Plates, Reader Systems and Methods for Luminescence Test Measurements", each filed on June 28, 2002, hereby incorporated by reference.
- the kit comprises one or more of the assay components in one or more multi- well plate wells, preferably in dry form.
- the assay components are in separate containers.
- the kit includes a container comprising binding reagents and stabilizing agents.
- the well reagents may include binding reagents, stabilizing agents.
- the kits do not contain any liquids in the wells.
- kits for use in conducting electrode induced luminescence assays comprising an assay plate, preferably a multi-well assay plate, one or more pH buffers and at least one assay component selected from the group consisting of at least one luminescent label (preferably electrochemiluminescent label) and at least one electrochemiluminescence coreactant, wherein said pH buffers comprise an ECL assay buffer background reducing agent (preferably, a non- phosphate pH buffering agent) or are substantially free of phosphate and/or said ECL coreactant is not TPA (and is preferably a functionalized tertiary alkylamine, most preferably PIPES).
- ECL assay buffer background reducing agent preferably, a non- phosphate pH buffering agent
- said ECL coreactant is not TPA (and is preferably a functionalized tertiary alkylamine, most preferably PIPES).
- kits comprising a multi- well plate and a pH buffer and at least one electrode induced luminescent label (preferably electrochemiluminescent label) and/or at least one bioreagent and/or at least one blocking reagent (e.g., BSA), where the kit comprises an ECL assay buffer background reducing agent (preferably, a non-phosphate buffering agent), is substantially free of inorganic phosphate and or comprises an ECL coreactant other than TPA (preferably a functionalized tertiary alkylamine, most preferably PIPES).
- ECL assay buffer background reducing agent preferably, a non-phosphate buffering agent
- TPA preferably a functionalized tertiary alkylamine, most preferably PIPES
- the kit comprises at least one material selected from group consisting of intact cell, cell lysate, cell fragment, cell membrane, membrane ghost, organelle, organelle fragment, organelle membrane, virion, virion fragment, virion membrane, liposome, detergent solubilized protein, detergent solubilized lipid or combinations thereof.
- the kit comprises a biomaterial selected from the group consisting of plasma membrane fragments, endosomes, clathrin-coated vesicles, endoplamic reticulum fragments, synaptic vesicles, golgi fragments, membrane subdomains, mitochondria, peroxisomes, lysosomes, liposomes, viral particles, viral-induced membrane enclosed particles shed from cells, and intact, organismally-derived lipid membrane bodies.
- a biomaterial selected from the group consisting of plasma membrane fragments, endosomes, clathrin-coated vesicles, endoplamic reticulum fragments, synaptic vesicles, golgi fragments, membrane subdomains, mitochondria, peroxisomes, lysosomes, liposomes, viral particles, viral-induced membrane enclosed particles shed from cells, and intact, organismally-derived lipid membrane bodies.
- the kit comprises at least one bioreagent, preferably immobilized on the plate surface selected from: antibodies, fragments of antibodies, proteins, enzymes, enzyme substrates, inhibitors, cofactors, antigens, haptens, lipoproteins, liposaccharides, cells, sub-cellular components, cell receptors, viruses, nucleic acids, antigens, lipids, glycoproteins, carbohydrates, peptides, amino acids, hormones, protein-binding ligands, pharmacological agents, luminescent labels (preferably ECL labels) or combinations thereof.
- at least one bioreagent is adapted or selected to binding to one or more membranes resulting in an electrode having such immobilized membranes.
- the biomaterial comprises a lipid/protein layer which contains at least one active protein selected from the group consisting of: single transmembrane receptors with intrinsic tyrosine kinase activity; non-tyrosine kinase transmembrane receptors (e.g., transferrin receptor); G-protein coupled receptors (GPCR); GPCR effector proteins (e.g., adenylate cyclase); phosphoinositides (e.g., phosphatidy inositol 4,5 bisphosphate (PIP 2 )); phospholipid or sphingolipid composition, identification, or function (i.e., changes in phosphotidylserine presence during apoptosis); organelle-bound GTPases/guanine nucleotide exchange factors (GEFs)/GTPase activating proteins (GAPs); cytokine/chemokine receptors; cell adhesion molecules (e.g., VCAM, integr
- the kit includes immobilized reagents that comprise proteins, nucleic acids, or combinations thereof.
- the plurality of wells includes at least two different bioreagents.
- a well may include two or more assay domains, wherein two or more assay domains have different bioreagent
- the kit comprises at least one electrochemiluminescence coreactant and/or at least one electrode induced luminescence label (preferably electrochemiluminescent label).
- the kit is adapted for multiple assays.
- the kit further comprises an additional assay reagent for use in an additional assay, the additional assay selected from the group consisting of radioactive assays, enzyme assays, chemical colorimetric assays, fluorescence assays, chemiluminescence assays and combinations thereof.
- the kit comprises two or more, preferably four or more, more preferably eight or more, more preferably 15 or more and most preferably 25 or more assay modules or plates.
- the kit is contained in a resealable bag or container (e.g., zip-lock opening).
- the bag or container is substantially impermeable to water.
- the bag is a foil, preferably an aluminized foil.
- the packaging may be translucent, transparent or opaque.
- the plates are packaged in aluminum lined plastic containers or bags containing a dry or inert atmosphere (e.g., the bags may be sealed under an atmosphere of nitrogen or argon or the bags may contain a dessicant).
- the containers are vacuum sealed.
- the container contains 1 plate.
- the container contains ten plates.
- the container includes between 10 and 100 plates.
- the assay modules or plates are sterile and/or substantially free of dust and other contaminants.
- the assay modules are also substantially sterile.
- the kit is manufactured (at least in part) and/or packaged in a "clean room” environment.
- the kit is manufactured (at least in part) and/or packaged in a Class 100,000 clean room having ⁇ 100,000 particles (the clean room particle count using a 0.5 micron particle count number) per cubic foot (or 3.53 million particles per cubic meter).
- the contaminant particle counts (particles less than 0.5 microns) of the kit is less than 60 million per square meter, more preferably 30 million per square meter, even more preferably less than 20 million, even more preferably less than 15 million and most preferably less than 10 million.
- the non-volatile residue in deionized water is less than 0.50 g/meter 2 , more preferably less than 0.25 g/meter , even more preferably less than 0.15 g/meter 2 and most preferably less than 0.10 g/meter 2 .
- the contaminant ion concentration is less than 50 ppm, more preferably less than 20 ppm, even more preferably less than 10 ppm, even more preferably less than 5 ppm, and most preferably less than 1 ppm.
- Another aspect of the present invention relates to methods of using the improved buffers, reagents and/or compositions of the invention.
- One embodiment of the invention relates to a method for conducting an electrochemiluminescence assay wherein electrochemiluminescence is induced in the presence of an ECL assay buffer of the invention.
- the electrochemiluminescence is induced using a carbon-based electrode.
- Another embodiment of the invention relates to a method for measuring the quantity of an ECL label wherein the label is induced to emit electrochemiluminescence in the presence of an ECL assay buffer of the invention and the electrochemiluminescence is measured so as to measure the quantity of the ECL label.
- the electrochemiluminescence is induced using a carbon-based electrode.
- the label is bound to or held in proximity to the electrode.
- Another embodiment of the invention relates to a method for measuring the quantity or activity of an analyte wherein the analyte reacts with, forms a complex with, or competes in a specific binding interaction with a labeled substance that comprises an ECL label, wherein the label is induced to emit electrochemiluminescence in the presence of an ECL assay buffer of the invention and the electrochemiluminescence is measured so as to measure the quantity or activity of the analyte.
- the electrochemiluminescence is induced using a carbon-based electrode.
- the presence or activity of the analyte results in the label being bound to or released from an electrode (e.g., via the formation of a specific binding complex or via a the cleavage or formation of a chemical bond).
- One embodiment of the invention relates to a method for conducting an electrochemiluminescence assay wherein electrochemiluminescence is induced in the presence of a composition comprising a pH buffer and an ECL co-reactant, said composition being substantially free of inorganic phosphate and/or comprising an ECL assay buffer background reducing agent (preferably, a non-phosphate pH buffering agent).
- Another embodiment of the invention relates to a method for conducting an electrochemiluminescence assay wherein electrochemiluminescence is induced in the presence of a composition comprising a pH buffer and an ECL co-reactant, wherein the ECL coreactant is a functionalized trialkylamine, preferably PIPES.
- composition comprising: (i) a metal-containing ECL moiety capable of being converted to an excited state from which electromagnetic radiation is emitted; (ii) an ECL co-reactant (preferably an amine or amine moiety) which, when oxidized, forms a strong reducing agent;
- an electrolyte capable of functioning as a medium in which said ECL moiety and said ECL co-reactant (e.g., amine or amine moiety) can be oxidized; and (iv) a pH buffers, wherein said composition is substantially free of inorganic phosphate, comprises an ECL background reducing agent (preferably, a non-phosphate pH buffering agent) and or said ECL co-reactant is a functionalized tertiary alkylamine;
- Another embodiment of the invention relates to a method of effecting a specific-binding assay, either qualitatively or quantitatively, in a sample or composition comprising a pH buffer substantially free of inorganic phosphate and a phospo-specific antibody.
- the sample or composition further comprises an ECL co-reactant.
- Another embodiment of the invention relates to a method of effecting a specific-binding assay, either qualitatively or quantitatively, in a well having one or more assay domains with binding reagents immobilized thereon using composition comprising a pH buffer substantially free of inorganic phosphate.
- the composition further comprises a phospho-specific antibody.
- Another embodiment of the invention relates to a method of effecting a specific-binding non-washed assay, either qualitatively or quantitatively, in a well having one or more assay domains with binding reagents immobilized thereon using composition comprising a ECL assay buffer that is substantially free of inorganic phosphate and/or comprises an functionalized trialkylamine ECL coreactant.
- Another embodiment of the invention relates to a method of performing an assay comprising forming a complex comprising a kinase product and a phospho-specific antibody, wherein said complex is not exposed to inorganic phosphate.
- the complex further comprises said metal-containing ECL moiety.
- Another embodiment of the invention relates to a method of generating emission of electromagnetic radiation, which comprises the steps of:
- composition comprising a pH buffer, said composition being substantially free of inorganic phosphate, and (i) a metal-containing ECL moiety capable of being converted to an excited state from which electromagnetic radiation is emitted; (ii) an amine or amine moiety which, when oxidized, forms a strong reducing agent; and/or (iii) an electrolyte capable of functioning as a medium in which said ECL moiety and said amine or amine moiety can be oxidized;
- Another aspect of the invention relates to improved assays.
- the invention is useful, for example, in enabling the detection and/or quantitation of one or more analytes of interest. These reactions include, for example, antigen-antibody interactions, ligand-receptor interactions, DNA and RNA interactions, enzymatic reactions, and other known reactions.
- the invention relates to and methods for qualitatively and quantitatively detecting the presence of analytes of interest in a multi-component sample or multi-component system. (See, U.S.
- One preferred aspect of the invention include methods involving one or more of the following: (a) a phospho-specific antibody; (b) assay involving capture reagents immobilized on a solid surface comprising an electrode or adjacent an electrode; and/or (c) assays involving low detection levels (and/or requiring high signal to background ratio).
- the embodiments of the invention can be used to test a variety of samples which may contain an analyte or activity of interest. Such samples may be in solid, emulsion, suspension, liquid, or gas form.
- the sample may further comprise, for example, water, organic solvents (e.g., acetonitrile, dimethyl sulfoxide, dimethyl formamide, n-methyl-pyrrolidone or alcohols) or mixtures thereof.
- Analytes that may be measured include, but are not limited to, whole cells, cell surface antigens, subcellular particles (e.g., organelles or membrane fragments), viruses, prions, dust mites or fragments thereof, viroids, antibodies, antigens, haptens, fatty acids, nucleic acids (and synthetic analogs), proteins (and synthetic analogs), lipoproteins, polysaccharides, inhibitors, cofactors, haptens, cell receptors, receptor ligands, lipopolysaccharides, glycoproteins, peptides, polypeptides, enzymes, enzyme substrates, enzyme products, second messengers, cellular metabolites, hormones, pharmacological agents, synthetic organic molecules, organometallic molecules, tranquilizers, barbiturates
- Activities that may be measured include, but are not limited to, the activities of phosphorylases, phosphatases, esterases, trans-glutaminases, nucleic acid damaging activities, transferases, oxidases, reductases, dehydrogenases, glycosidases, ribosomes, protein processing enzymes (e.g., proteases, kinases, protein phophatases, ubiquitin-protein ligases, etc.), nucleic acid processing enzymes (e.g., polymerases, nucleases, integrases, ligases, helicases, telomerases, etc.), cellular receptor activation, second messenger system activation, etc.
- protein processing enzymes e.g., proteases, kinases, protein phophatases, ubiquitin-protein ligases, etc.
- nucleic acid processing enzymes e.g., polymerases, nucleases, integrases, ligases,
- Whole cells may be animal, plant, or bacteria, and may be viable or dead. Examples include plant pathogens such as fungi and nematodes.
- the term "subcellular particles" is meant to encompass, for example, subcellular organelles, membrane particles as from disrupted cells, fragments of cell walls, ribosomes, multi-enzyme complexes, and other particles which can be derived from living organisms.
- Nucleic acids include, for example, chromosomal DNA, plasmid NA, viral DNA, and recombinant DNA derived from multiple sources. Nucleic acids also include RNA's, for example messenger RNA's, ribosomal RNA's and transfer RNA's.
- Polypeptides include, for example, enzymes, transport proteins, receptor proteins, and structural proteins such as viral coat proteins.
- Preferred polypeptides are enzymes and antibodies. Particularly preferred polypeptides are monoclonal antibodies.
- Hormones include, for example, insulin and T4 thyroid hormone.
- Pharmacological agents include, for example, cardiac glycosides. It is of course within the scope of this invention to include synthetic substances which chemically resemble biological materials, such as synthetic polypeptides, synthetic nucleic acids, and synthetic membranes, vesicles and liposomes. The foregoing is not intended to be a comprehensive list of the biological substances suitable for use in this invention, but is meant only to illustrate the wide scope of the invention.
- composition or reagent of the invention are preferably aqueous.
- the composition or reagent can also be non-aqueous.
- suitable organic liquids are acetonitrile, dimethylsulfoxide (DMSO), dimethylformamide (DMF), methanol, ethanol, and mixtures of two or more of the foregoing.
- DMSO dimethylsulfoxide
- DMF dimethylformamide
- methanol ethanol
- ethanol ethanol
- mixtures of two or more of the foregoing etraalkylammonium salts, such as tetrabutylammonium tetrafluoroborate, are soluble in organic liquids and can be used with them to form non-aqueous electrolytes.
- the analyte of interest is present at a concentration of 10° molar or less, for example, at least as low as 10 "18 molar.
- the sample which may contain the analyte of interest can be in solid, emulsion, suspension, liquid, or gas form, and can be derived from, for example, cells and cell-derived products, water, food, blood, serum, hair, sweat, urine, feces, tissue, saliva, oils, organic solvents or air.
- the sample can further comprise, for example, water, acetonitrile, dimethyl sulfoxide, dimethyl formamide, n-methyl-pyrrolidone or alcohols.
- the reagent includes an ECL moiety conjugated to an antibody, antigen, nucleic acid, hapten, small nucleotide sequence, oligomer, ligand, enzyme, or biotin, avidin, streptavidin, Protein A, Protein G, or complexes thereof, or other secondary binding partner capable of binding to a primary binding partner through protein interactions.
- ECL assay a method of detecting or quantitating an analyte of interest by ECL assay, which comprises:
- a metal-containing ECL moiety capable of being converted to an excited state from which electromagnetic radiation is emitted, said ECL moiety being capable of entering into a binding interaction with the analyte of interest or a substance defined in (b)(i), (b)(ii), or (b)(iii);
- an ECL co-reactants preferably an amine or an amine moiety
- an electrolyte capable of functioning as a medium in which said ECL moiety and said species can be oxidized
- the composition has less than 15 mM inorganic phosphate, more preferably it has less than 5 mM inorganic phosphate, even more preferably it has less than 1 mM phosphate, even more preferably it is substantially free of inorganic phosphate, most preferably it is free of inorganic phosphate.
- Solid phase assay formats e.g., solid phase binding assays
- the binding interaction between a binding reagent that is attached and a labeled analyte results in the localization of the label on the solid phase supporting the immobilized binding reagent.
- the biological activity or binding reaction to be measured can be quantified through a measurement of the labels on the solid phase.
- Many solid phase assay formats involve a wash step to remove unbound labels prior to detecting labels on the solid phase (washed assays). Assays without this wash step can be achieved when the detection method can discriminate between free and bound labels.
- Non-wash assay formats are desired because washing steps, in many applications, can be difficult or cumbersome to carry out. In many cases, however, the performance of non- wash assays is limited by high background signals due to incomplete discrimination of free vs. bound labels.
- the ECL assay buffers of the invention improve the discrimination of free vs. bound labels in ECL assays using assay reagents attached (e.g., by covalent interactions, specific binding interaction, non-specific adsorption, etc,) to the working electrode used to induce ECL (i.e., the ability to selectively detect labels that are bound to the electrode). More specifically, the compositions and reagents of the invention improve the ratio of ECL signal from bound label to ECL signal from free label. It is believed that the ECL assay buffers of the invention decrease the distance from the solid electrode surface from which an ECL label is induced to emit luminescence.
- the "effective excitation length" is impacted by i) the distance short-lived intermediates involved in the generation of ECL (e.g., oxidation product of TPA) can diffuse from the electrode before they are destroyed in a destructive side reaction (a function of the lifetimes and diffusion constants for these intermediates) and ii) the rate at which free labels or labeled reagents diffuse into the region close enough to the electrode to participate in a reaction with these reactive intermediates (a function of the diffusion constant for the unbound ECL labels or labeled reagents ).
- ECL e.g., oxidation product of TPA
- the effective excitation length is reduced by > 50 %, preferably by > 75 %, even more preferably by > 90 %.
- the ECL assay buffers of the invention are desirable since they maximize the ratio of bound/free ECL signal which enhances the performance of the assay.
- another aspect of the invention relates to non- wash format assays using pH buffer substantially free of inorganic phosphate which maximizes the ratio of bound/free ECL signal.
- the assay involves the capture of an ECL label at a surface having or being adjacent to an electrode surface. See, for example, U.S. Patent Nos. 6,066,448; 6,090,545; 6,140,045; 6,207,369, 6,214,369; and U.S. Application Nos. 10/185,274 and 10/185,363, entitled “Assay Plates, Reader Systems and Methods for Luminescence Test Measurements", each filed on June 28, 2002, hereby incorporated by reference.
- another embodiment of the invention relates generally to electrochemiluminescence assays using reagents immobilized on a surface (preferably an electrode surface) and having advantageous effective excitation lengths.
- the assay results in an effective excitation length less then 100 microns, more preferably less than 75 microns, even more preferably less than 50 microns, even more preferably less than 25 microns, even more preferably less than 10 microns, even more preferably less than 5 microns and most preferably less than 1 micron.
- the effective excitation length is less than 0.5 micron, preferably less than 0.2 microns, even more preferably less than 0.1 micron.
- Yet another aspect of the present invention relates to system for performing assays and comprising or using the reagents and/or compositions of the invention.
- One embodiment of the invention relates to a system for ECL detection or quantitation of an analyte of interest in a sample, said system comprising:
- said pH buffering agent is substantially free of phosphate or is an ECL assay buffer background reducing agent and/or said ECL coreactant is a functionalized tertiary amine.
- Another embodiment of the invention relates to a system for ECL detection or quantitation of an analyte of interest in a sample, said system comprising: (a) a pH buffering agent;
- an ECL co-reactant preferably a functionalized tertiary amine, which is capable of being converted to a strong reducing agent and an electrolyte
- one or more detectors for measuring the emitted radiation to determine the presence or quantity of the analyte of interest in the sample.
- Another aspect of the invention relates to improved methods and systems for selecting or identifying biologically active compounds and, optionally, incorporating such biologically active compounds into suitable carrier compositions in appropriate dosages as described in paragraph 6.11 of U.S. Application Nos. 10/185,274 and 10/185,363, entitled “Assay Plates, Reader Systems and Methods for Luminescence Test Measurements", each filed on June 28, 2002, hereby incorporated by reference.
- One embodiment relates to the use of the invention to screen for new drugs, preferably, by high-throughput screening (HTS), preferably involving screening of greater than 50, more preferably 100, more preferably 500, even more preferably 1,000, and most preferably 5,000.
- HTS high-throughput screening
- the screening involves greater than 10,000, greater than 50,000, greater than 100,00, greater than 500,000 and/or greater than 1,000,000 compounds.
- the reagents, compositions, methods, apparatus and/or assay plates or modules of the invention may be integrated into and/or used in a variety of screening and/or drug discovery methods.
- screening and/or drug discovery methods include those set forth in U.S. Patent No. 5,565,325 to Blake; U.S. Patent No. 5,593,135 to Chen et al.; U.S. Patent No. 5,521,135 to Thastrup et al.; U.S. Patent No. 5,684,711 to Agrafiotis et al.; U.S. Patent No. 5,639,603 to Dower et al.; U.S. Patent No. 5,569,588 to Ashby et al.; U.S.
- the invention further comprises identifying adverse effects associated with the drug and storing information relating to the adverse effects in a database. See, United States Patent No. 6,219,674 by Classen.
- Another aspect of the invention relates to improved biologically active compounds and/or drugs made using the inventive methods.
- ECL measurements were carried out using multi-well plates having integrated carbon ink electrodes (see, Example 6.1 and, in particular, Plate Types A and B of copending U.S. Application Nos. 10/185,274 and 10/185,363, each filed on June 28, 2002, entitled “Assay Plates, Reader Systems and Methods for Luminescence Test Measurements", hereby incorporated by reference).
- the electrodes were, optionally treated with an oxygen plasma prior to being coated with binding reagents (plasma treated and non-plasma treated plates, respectively, are designated hereafter as PT or NPT plates). Binding reagents were immobilized on the working electrodes of the plates using the methods described in the U.S. Appl Nos.
- the format involved the phosphorylation of a kinase substrate immobilized on electrodes in multi-well plates adapted for ECL measurements (see Example I), complexation of the product to a labeled anti-phosphotyrosine antibody and detection of the surface-bound label via an ECL measurement in the presence of an ECL Assay Buffer comprising an ECL coreactant.
- the electrodes were pretreated by etching in an oxygen plasma to increase the amount of exposed carbon.
- the kinase substrate poly(Glu, Tyr) having a 4:1 ratio of Glu to Tyr and a molecular weight of 20,000-50,000 Daltons (PGT, Sigma- Aldrich Co.) — was immobilized by non-specific adsorption on the surface of the working electrodes in the wells of the plates.
- the working electrode in each well was treated with 1500 nL of a solution containing 1 mg/ml PGT in PBS buffer.
- the plate was then dried overnight and blocked in a 5% solution of bovine serum albumin at 4°C. The plate was washed to remove the blocking agent prior to use.
- the assay was carried out by adding, to each well, 50 ⁇ L of a buffered solution containing a soluble tyrosine kinase (c-src, Upstate Biotechnology), an anti-phosphotyrosine monoclonal antibody (Abzyme, IGEN International) that was labeled with a sulfonated derivative of ruthenium-trw-bipyridine (Sulfo-TAGTM label, Meso Scale Discovery), ATP and Mg +2 . The reaction was allowed to proceed for 1 hour. The plate was was washed and 100 ⁇ L of an ECL Assay Buffer containing tripropylamine was added. The plate was analyzed using electrochemiluminescence detection as described in Example I.
- a buffered solution containing a soluble tyrosine kinase (c-src, Upstate Biotechnology), an anti-phosphotyrosine monoclonal antibody (Abzyme, IGEN International) that was labeled with a
- EDTA was added into the new ECL Assay Buffers to stop the phosphorylation reaction by sequestering Mg +2 , an ion required for kinase activity (EDTA was not required in phosphate- based ECL Assay Buffers due to the affinity of phosphate for magnesium ions).
- This composition allowed us to combine two steps (addition of stop-solution and actual assay buffer) into one step. Applicants found that EDTA interfered with ECL generation at concentrations higher that 10 mM, but that 5-12 mM EDTA was enough to stop the reaction while only causing a small decrease in ECL signal.
- Figure 1 shows the decrease in ECL from the phosphopeptide-antibody complex as a function of the time between the addition of the Assay Buffer and the measurement of ECL.
- Figure 2 shows the results of an experiment in which 200 ⁇ L of Gly-Gly Assay Buffer (as described above except that the concentration of EDTA was 5 mM and 0.2% Triton X-100 was added) was added directly to the reaction mixture without an intervening wash step. Storage of the plates for 20 hours prior to measuring ECL resulted in only a 15% decrease in signal.
- Gly-Gly Assay Buffer as described above except that the concentration of EDTA was 5 mM and 0.2% Triton X-100 was added
- a sandwich immunoassay was used to detect autophosphorylated ⁇ -epidermal growth factor receptor ( ⁇ -EGFR) in cell lysates prepared from EGF-activated A-431 cells (American Type Culture Collection).
- the assay employed a biotin labeled capture antibody directed against the ⁇ -EGFR extracellular domain and a Sulfo-TAG labeled detection antibody that is specific for phosphotyrosine (see Example II).
- the biotin-labeled antibody was immobilized on the working electrode of multi- well plates adapted for use in ECL assays (see Example I) through the interaction of the biotin label with avidin that was passively adsorbed on the electrode surface.
- Solubilized EGFR (in RIP A, a deoxycholate-containing buffer) was then added and allowed to bind to the anti-EGFR antibody. Subsequently, the Sulfo-TAG labeled ⁇ - phosphotyrosine antibody was added to detect autophosphorylated EGFR.
- the great loss of signal that occurs in the phosphate buffer is believed to be due to the phosphate ion competing with the phosphorylated protein for the anti-phosphotyrosine antibody. Moreover, the signal to background ratio was increased 2.5 fold using the glycyl-glycine assay buffer.
- ECL Assay Buffer background the light signal (and the noise in the light signal) generated by the ECL Assay Buffer in the absence of the ECL label (ECL Assay Buffer background). This limitation is especially evident in washed assays, assays exhibiting low levels of non-specific binding and/or assays employing ECL readers having sensitive, low noise, light detectors. Applicants examined the relationship between ECL Assay Buffer composition and the ability to discriminate between the signal due to an ECL label and the ECL Assay Buffer background.
- ECL Assay Buffer formulations that varied in the identity of the ECL coreactant and/or the identity of the pH buffering agent: TP A/Phosphate, TPA/Tris, TPA/Gly-Gly and PIPES/Phosphate (where PIPES stands for l,4-piperazine-l,4-bis(2-ethanesulfonic acid).
- the experiments were carried out on multi-well plates (as described in Example I) that had avidin immobilized on the working electrodes.
- the experiments were carried out on plates that were treated with an oxygen plasma (PT plates) as well as on untreated plates (NPT plates).
- Avidin was immobilized on PT plates by dispensing 2.5 uL of solution containing 0.5 mg/mL avidin and 0.0035% Triton X-100 on the working electrode of each well, allowing the solution to evaporate to dryness over a period of 1 hour and blocking the remaining surfaces of the well overnight at 4°C with a 5% (w/v) solution of BSA.
- Avidin was immobilized on NPT plates by dispensing 2.5 uL of solution containing 0.5 mg/mL avidin and 0.0075% Triton X-100 on the working electrode of each well, allowing the solution to evaporate to dryness overnight and blocking the remaining surfaces of the well for 2 hours with a 5% (w/v) solution of BSA. Varying amounts of an ECL label could be brought into proximity with the electrode surface by treating the wells with a solution containing bovine IgG that was labeled with biotin and - 1.9 Sulfo-TAG labels per protein (BT-IgG*).
- the binding of the BT-IgG* was accomplished by adding 50 uL of a solution containing 1 nM of BT-IgG* in PBS to the wells and incubating for a period of 60 minutes while shaking. The wells were washed with water, 100 uL of ECL Assay Buffer was added and ECL was measured. The signal due to ECL Assay Buffer Background was measured by repeating the experiment as described above except that the BT-IgG* was omitted.
- the four combinations of coreactant and pH buffer to be tested were optimized to identify the concentration of coreactant, the concentration of pH buffer and the pH that gave the best ratio of signal from BT-IgG* to ECL Assay Buffer background (S/B ratio).
- the concentrations of coreactant were varied from 25 to 200 mM for TPA or 13 to 200 mM for PIPES.
- the concentrations of pH buffer were varied from 50 to 300 mM for phosphate, 100-600 mM for Tris or 50-800 mM for Gly-Gly.
- the pH was varied from 7 to 8.
- the ECL Assay Buffers also contained 0.05% Triton X-100. KOH or HCl were added as necessary to achieve the desired pH.
- TP A/Phosphate 125 mM TPA, 200 mM phosphate, 0.05% Triton X-100, pH 7.5
- TPA/Tris 125 mM TPA, 200 mM Tris, 0.05% Triton X-100, pH 7.8
- TPA/Gly-Gly 100 mM TPA, 200 mM Gly-Gly, 0.05% Triton X-100, pH 7.8
- PIPES/Phos 25 mM PIPES, 100 mM phosphate, 0.05% Triton X-100, pH 7.5).
- Figures 4 A and 4B compare the performance of the four optimized formulations for assays carried out on NPT plates and PT plates, respectively.
- the TPA/Gly-Gly buffer had an S/B ratio that was approximately the same as the TPA/Tris buffer and could, therefore, be expected to produce similar detection limits.
- the PIPES/Phosphate buffer performed slightly better (in terms of S/B ratio) than the TP A/Phosphate buffer on unetched plates and slightly worse on etched plates.
- ECL assay formats the sensitivity with which an ECL label held in proximity to an electrode can be measured is limited by the light signal (and the noise in the light signal) generated by ECL labels in solution. This limitation is especially evident in assays in which labels in solution are not removed by washing prior to the addition of an ECL Assay Buffer and the measurement of ECL (Unwashed Assays).
- Applicants examined the relationship between ECL Assay Buffer composition and the ability to discriminate between the signal due to ECL labels bound to (or held in proximity to) an electrode and ECL labels that are free in solution.
- the specific signal from bound ECL labels was measured using BT- IgG* bound to avidin-coated electrodes as described in Example IV.
- the ECL Assay Buffer background was determined by omitting the BT-IgG*, also as described in Example IV.
- the ECL signal from free ECL labels in solution was determined similarly to the ECL Assay Buffer background except that the ECL Assay Buffer added to the wells included 10 nM bovine IgG having 3.9 labels per protein (IgG*).
- the ratio of the ECL signal from the bound BT-IgG* to the ECL signal from the free IgG* (B/F ratio) is indicative of the sensitivity with which bound ECL labels can be detected in the presence of free ECL labels in solution.
- S/B (Bound)/(Background);
- B/F (Bound-Background)/(Free-Background).
- S/B (Bound)/(Background);
- B/F (Bound-Background)/(Free-Background).
- PIPES-containing ECL Assay Buffers were prepared with phosphate, Tris or Gly-Gly as the buffering agent. The B/F ratio of each of these mixtures was further optimized by varying the concentration of PIPES and the buffer component. The concentration of PIPES was varied from 12.5 to 200 mM in the phosphate-based buffer and 25 to 100 mM in the Tris and Gly-Gly buffers. The concentrations of the buffering agent were varied from 100 to 400 mM. In all cases, the ECL Assay Buffers also contained 0.05% Triton X-100. KOH or HCl were added as necessary to achieve the desired pH.
- PIPES/PHOSPHATE 25 mM PIPES, 100 mM phosphate, 0.05% Triton X-100, pH 7.5
- PIPES/Tris 25 mM PIPES, 200 mM Tris, 0.05% Triton X-100, pH 7.8
- PIPES/Gly-Gly 25 mM PIPES, 100 mM Gly-Gly, 0.05% Triton X- 100, pH 7.8).
- Figures 5 A and 5B compare the performance of the three optimized formulations for nonwashed assays carried out on NPT plates and PT plates, respectively.
- the figures compare the performance to the conventional TP A Phosphate buffer.
- PIPES PIPES
- Figure 6 shows the effect of the presence of various non-ionic detergents on ECL signal from BT-IgG* bound to avidin-coated plasma treated electrodes.
- the detergents were added at 0.5 %(w/v) to one of two ECL Assay Buffers:
- Figure 6A shows the results obtained with 150 mM TPA, 250 mM phosphate, pH 7.5;
- Figure 6B shows the results obtained with 50 mM PIPES, 150 mM phosphate, pH 7.5.
- BT-IgG* 50 ⁇ L of a 0.01 nM solution was allowed to bind to the avidin surface.
- the plates were washed, ECL Assay Buffers were added and the plates were analyzed using ECL detection.
- the figure shows the Assay Buffer background, signal and S/B ratio (calculated as in Example 4) measured using each of the ECL Assay Buffers.
- Triton X-100 had a significant effect on performance.
- the effect was large; addition of Triton led to a >2.5 fold increase in the S/B ratio.
- the effect of Triton X-100 on the TPA-based buffer was much smaller.
- Triton X-100 differs from the other detergents present in that it contains a phenol ether moiety.
- ⁇ -Octyl glucopyranoside was present at a concentration of 4 %(v/v).
- streptavidin-coated electrodes were treated with 0.018 pmol of BT-IgG* (6.3 labels per protein) in a volume of 50 uL.
- the figure shows that all the detergents significantly improved the ECL signal measured in the presence of TPA-containing Assay Buffers relative to the same Assay Buffer in the absence of detergent. In most cases, the improvement was greater than 2 fold.
- it was observed that the maximal signals observed in each Assay Buffer tended to occur at the critical micellar concentration (cmc) of a detergent or higher.
- tertiary amines were screened for their ability act as coreactants. The measurements were conducted in a similar fashion as the methods described in Examples IV and V. ECL Assay Buffers were prepared that contained the selected tertiary amine (200 mM), phosphate buffer (200 mM), Triton X-100 (0.1 %) and that were adjusted to pH 7.5.
- the signal from label attached to an electrode was measured using the following procedure: i) a solution containing 0.3 nM Bt-IgG * (IgG labeled with Sulfo-TAG and biotin) in an ECL Assay Buffer was introduced into the wells of streptavidin-coated 96-well NPT or PT plates; ii) the plates were incubated for 2 h with shaking to allow the Bt-IgG* to bind the surface; iii) the plates were washed four times and 150 uL of the ECL Assay Buffer was added and iv) the ECL from the label was measured.
- the assay buffer background was measured by introducing 150 uL of an ECL Assay Buffer was measured.
- ECL Assay Buffer into a streptavidin-coated plate and measuring the ECL.
- the ECL signal from free ECL labels in solution was measured by introducing a solution containing 10 nM IgG* (IgG labeled with Sulfo-TAG but not biotin) into the wells of streptavidin-coated 96-well NPT or PT plates and measuring the ECL.
- Tables Ila and lib presents the results of the experiments on NPT and PT plates, respectively.
- the results show that a variety of tertiary amines were suitable for use as coreactants.
- the introduction of functionalization appeared to improve the ratio of bound to free signals.
- Tertiary amines having N-substituted morpholine core or, even more advantageously, a di-N-substituted piperazine core appeared to be especially well suited for distinguishing bound vs. free signals (especially on NPT surfaces).
- MOPS was found to perform particularly well on PT plates while bis- Tris-Propane gave exceptionally high signals on NPT plates.
- ECL was also measured using coreactants in comparable buffers, except they did not include detergent or Tween 20 was used as the detergent.
- POPSO P ⁇ peraz ⁇ ne-N,N'-b ⁇ s(2-hydroxypropane)sulfon ⁇ c acid
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JP2003527403A JP4729254B2 (en) | 2001-09-10 | 2002-09-10 | Assay buffer, composition containing it, and method of use thereof |
EP02759622.0A EP1436598B1 (en) | 2001-09-10 | 2002-09-10 | Assay buffer, compositions containing the same, and methods of using the same |
AU2002324947A AU2002324947B2 (en) | 2001-09-10 | 2002-09-10 | Assay buffer, compositions containing the same, and methods of using the same |
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US11927592B2 (en) | 2019-01-03 | 2024-03-12 | Meso Scale Technologies, Llc. | Compositions and methods for carrying out assay measurements |
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CA2932756C (en) | 2020-07-07 |
EP1436598B1 (en) | 2013-11-27 |
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JP5415326B2 (en) | 2014-02-12 |
US8785201B2 (en) | 2014-07-22 |
US20050136048A1 (en) | 2005-06-23 |
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US20140336070A1 (en) | 2014-11-13 |
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US9891221B2 (en) | 2018-02-13 |
EP1436598A4 (en) | 2007-10-31 |
CA2932756A1 (en) | 2003-03-20 |
CA2783186A1 (en) | 2003-03-20 |
US6919173B2 (en) | 2005-07-19 |
CA3081228A1 (en) | 2003-03-20 |
US7288410B2 (en) | 2007-10-30 |
EP1436598A1 (en) | 2004-07-14 |
US20180238882A1 (en) | 2018-08-23 |
JP2005522671A (en) | 2005-07-28 |
CA2783186C (en) | 2016-08-23 |
US20210109100A1 (en) | 2021-04-15 |
US20050136497A1 (en) | 2005-06-23 |
JP2010181410A (en) | 2010-08-19 |
CA3081228C (en) | 2022-02-15 |
AU2002324947B2 (en) | 2007-11-15 |
US10753934B2 (en) | 2020-08-25 |
CA2460114C (en) | 2012-11-06 |
JP4729254B2 (en) | 2011-07-20 |
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