WO1999009156A2 - Protease-related protein - Google Patents

Protease-related protein Download PDF

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Publication number
WO1999009156A2
WO1999009156A2 PCT/EP1998/005110 EP9805110W WO9909156A2 WO 1999009156 A2 WO1999009156 A2 WO 1999009156A2 EP 9805110 W EP9805110 W EP 9805110W WO 9909156 A2 WO9909156 A2 WO 9909156A2
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Prior art keywords
dna
protein
hair
cdna
expression
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PCT/EP1998/005110
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French (fr)
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WO1999009156A3 (en
Inventor
Terence N. Dear
Thomas Boehm
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Deutsches Krebsforschungszentrum Stiftung des öffentlichen Rechts
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Priority to JP2000509822A priority Critical patent/JP2002518991A/en
Priority to EP98945221A priority patent/EP1007677B1/en
Priority to AT98945221T priority patent/ATE283358T1/en
Priority to DE69827808T priority patent/DE69827808T2/en
Publication of WO1999009156A2 publication Critical patent/WO1999009156A2/en
Publication of WO1999009156A3 publication Critical patent/WO1999009156A3/en

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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/14Hydrolases (3)
    • C12N9/48Hydrolases (3) acting on peptide bonds (3.4)
    • C12N9/50Proteinases, e.g. Endopeptidases (3.4.21-3.4.25)
    • C12N9/64Proteinases, e.g. Endopeptidases (3.4.21-3.4.25) derived from animal tissue
    • C12N9/6421Proteinases, e.g. Endopeptidases (3.4.21-3.4.25) derived from animal tissue from mammals
    • C12N9/6424Serine endopeptidases (3.4.21)
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K8/00Cosmetics or similar toiletry preparations
    • A61K8/18Cosmetics or similar toiletry preparations characterised by the composition
    • A61K8/30Cosmetics or similar toiletry preparations characterised by the composition containing organic compounds
    • A61K8/64Proteins; Peptides; Derivatives or degradation products thereof
    • A61K8/66Enzymes
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P43/00Drugs for specific purposes, not provided for in groups A61P1/00-A61P41/00
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61QSPECIFIC USE OF COSMETICS OR SIMILAR TOILETRY PREPARATIONS
    • A61Q5/00Preparations for care of the hair
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K16/00Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
    • C07K16/18Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K2800/00Properties of cosmetic compositions or active ingredients thereof or formulation aids used therein and process related aspects
    • A61K2800/70Biological properties of the composition as a whole
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K2800/00Properties of cosmetic compositions or active ingredients thereof or formulation aids used therein and process related aspects
    • A61K2800/80Process related aspects concerning the preparation of the cosmetic composition or the storage or application thereof
    • A61K2800/86Products or compounds obtained by genetic engineering
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K48/00Medicinal preparations containing genetic material which is inserted into cells of the living body to treat genetic diseases; Gene therapy
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K2317/00Immunoglobulins specific features
    • C07K2317/20Immunoglobulins specific features characterized by taxonomic origin

Definitions

  • the present invention relates to a protease-related protein, a DNA encoding the same and a process for the preparation thereof
  • this invention concerns the use of the DNA and the protein as well as antibodies directed against the protein
  • the subject matter of the present invention is represented by a protease-relate ⁇ protein, the protein comprising the ammo acid sequence of fig 1 or an ammo acid sequence differing therefrom ⁇ one or more ammo acids
  • the present invention is based on the applicant's finding that the gene product of the whn gene is responsible for regulating the expression of at least three genes. Two of these genes code for the known keratins Ha3 (cf Winter, H et al , Exp Cell Res 212 (1994) , 190-200) and CK15 (cf Nozaki, M et al , Gene 138 (1994) , 197-200) , respectively.
  • the third gene codes for a protein which has homologies with respect to a protease of the kallikrein family, optionally a protease activity, but differs from a known protease of the kallikrein family on the DNA level by hybridization under normal conditions.
  • Such a protein has the amino acid sequence of fig. 1 or an amino acid sequence differing therefrom by one or more amino acids. Furthermore, the applicant has found that when the gene product of the whn gene is lacking the genes of Ha3 and CK15 are underexpressed whereas the gene of the above protein is overexpressed.
  • PVP prote-related protein
  • RNA or DNA may be an RNA or a DNA.
  • the latter may be a genomic DNA or a cDNA, for example.
  • Preferred is a DNA comprising the following:
  • hybridizing DNA refers to a DNA which hybridizes with a DNA of (a) under normal conditions, particularly at 20°C below the melting point of the DNA.
  • a DNA according to the invention is described below in the form of a cDNA. It stands as an example for every DNA falling under the present invention.
  • a cDNA according to the invention it is favorable to isolate mRNA from skin cells of whn(+/+ ) mice and nu/nu (whn (-/-) ) mice, respectively, to transcribe the mRNA into cDNA and subject the cDNA to a "representational difference analysis" (RDA) method (cf Hubank, .
  • RDA representational difference analysis
  • cDNA which is underexpressed and overexpressed, respectively, m nu/nu mice as compared to whn(+/+) mice
  • cDNA represents a cDNA according to the invention.
  • a cDNA according to the invention may be present a vector and expression vector, respectively
  • an expression vector for E coli these are e.g. pGEMEX, pUC derivatives, pGEX-2T, pET3b and pQE-8
  • pYlOO and Ycpadl have to be mentioned as examples
  • wnile for the expression animal cells e.g. pKCR, pEFBOS , cDM8 and pCEV4 have to be indicated.
  • the baculo virus expression vector pAcSGHisNT-A s especially suitable
  • suitable cells to express a cDNA according to tne invention which is present an expression vector
  • suitable cells comprise the E coli strains HB101, DH1 , xl776, J 101, JM 109, BL21 and SG 13009, the yeast strain saccharomyces cerevisiae and the animal cells Ltk, 3T3 , FM3A, CHO, COS, Vero and HeLa as well as the insect cells sf9
  • a cDNA according to the invention has to be inserted m an expression vector He is also familiar with the fact that this DNA can be inserted connection with a DNA coding for another protein and peptide, respectively, so that the cDNA according to the invention can be expressed in the form of a fusion protein.
  • an antibody directed against an above protein and fusion protein may be prepared by conventional processes. It may be polyclonal and monoclonal, respectively. For its preparation it is favorable to immunize animals, particularly rabbits or chickens for a polyclonal antibody and mice for a monoclonal antibody, with an above (fusion) protein or fragments thereof . Further boosters of the animals can be effected with the same (fusion) protein or fragments thereof .
  • the polyclonal antibody may then be obtained from the animals' serum and yolk, respectively.
  • spleen cells from the animals are fused with myeloma cells.
  • the present invention enables to investigate the keratinization of hair.
  • (PVP) can be detected in cells, particularly skin cells, by means of an antibody according to the invention.
  • a relation between (PVP) and the keratinization of hair can be established.
  • the expression of the gene coding for (PVP) can be detected by a nucleic acid according to the invention, particularly a DNA and primers derived therefrom This detection can be carried out as usual, particularly a Southern blot
  • the present invention s suited to interfere m regulating fashion with the keratinization of hair
  • This regulation may be positive or negative
  • a positive regulation is understood to mean one by which an impaired keratimzation of hair can be encountered
  • a negative regulation would exist if a normal or strong keratimzation of hair was reduced
  • PVP protein binding protein
  • This substance may be an antibody according to the invention
  • it may be an anti-sense oligonucleotide which is suited for the expression inhibition of the gene coding for (PVP)
  • the substance may be a substance which has an antagonistic effect with respect to (PVP) It may be advantageous to use several substances It may be especially favorable to use additionally one or more of the proteins Ha3 and CK15 as such or the form of nucleic acids expressing them
  • Another subject matter of the invention relates to a product which is suited for regulating the keratimzation of hair
  • a product which is suited for regulating the keratimzation of hair
  • the present invention represents a major contribution to the understanding of the keratinization of hair and a possible regulating interference.
  • Fig. 1 shows the base sequence of a cDNA according to the invention as well as the amino acid sequence, derived therefrom, of a (PVP) according to the invention.
  • a cDNA according to the invention was prepared according to the "representational difference analysis” (RDA) method.
  • RDA representational difference analysis
  • This method comprises the isolation of mRNA from skin cells of whn(+/+) mice and nu/nu mice, respectively, the transcription of the mRNA into cDNA, and the differentiation of the cDNA so as to identify that which is underexpressed and overexpressed, respectively, in nu/nu mice.
  • the latter represents a cDNA according to the invention.
  • R-Bgl-12 5 ' -GATCTGCGGTGA-3 '
  • R-Bgl-24 5 ' -AGCACTCTCCAGCCTCTCACCGCA-3 ⁇
  • R-Bgl-12 5' -GATCTGTTCATG-3 '
  • N-Bgl-12 5' -GATCTTCCCTCG-3 '
  • N-Bgl-24 5 ' -AGGCAACTGTGCTATCCGAGGGAA-3 '
  • RNA was initially obtained from the skin of whn(+/+ ) mice and nu/nu mice, respectively, according to the "single step RNA extraction" method (Chomczynski and Sacchi, 1987). Thereafter, the poly A-mRNA fractions from the two RNA populations were isolated by means of dynabeads ol ⁇ go(dT) according to the corresponding protocol from the Dynal company .
  • the "ribo clone cDNA synthesis kit" from the company of Promega was used for the synthesis of double- stranded whn(+/+) cDNA and nu/nu cDNA, respectively. 4 ⁇ g of poly A- mRNA were used each to obtain about 2 ug cDNA.
  • reaction vessel was used to combine the following :
  • the resulting Dpnll -digested whn(+/+) skin-cDNA representation represented the driver-DNA population to be used in the subtractive hybridization .
  • the DNA extracts were purified, so that a total of 60 ⁇ l of solution was obtained.
  • the concentration of this solution was evaluated by electrophoresis of 5 ⁇ l in a 1 % agarose gel.
  • the reaction was discontinued by the addition of 160 ul 50 mM Tris-HCl (pH 8.9) and 5 minutes of incubation at 98°C. Thereafter, the vessel was placed on ice up to the next step.
  • PCR program 1 min: 95°C allowing to cool to 80°C, addition of 1 ⁇ l Taq DNA polymerase (5 U/ ⁇ l) , 18 x: 1 min: 95°C 3 min: 70 °C, finally: 10 min: 72°C; allowing to cool to 4°C.
  • the ligation batch from step 8e) was diluted by adding 100 ⁇ l water to a concentration of 1.25 ng/ ⁇ l. 40 ul of this dilution (50 ng ⁇ were mixed with 80 ⁇ l driver DNA (see item 4.) and treated again according to steps 6. to 8.
  • the oligonucleotide adaptors step 8.; were changed, the J-Bgl oligonucleotides were ligated in this case to the newly formed difference product 2.
  • the concentration of the difference product 2 ligated with the J-Bgl oligos was reduced to a concentration of 1 ng/ ⁇ l .
  • 10 ⁇ l of this solution were diluted again with 990 ⁇ l water (+ 30 ⁇ g yeast -RNA) , so that the concentration was then 10 pg/ul .
  • the subtractive hybridization was carried out with 100 pg (10 ⁇ l) J- ligated difference product 2 and 40 ⁇ g (80 ⁇ l) driver DNA from step 4. As for the rest, the procedure was carried out as in the case of the 1st and 2nd difference products according to steps 6. to 8.
  • the PCR according to the MBN reaction (item 7.g) formed an exception - here only 18 cycles in place of 22 ones were carried out . 11.
  • the 3rd difference product was initially subjected to a restriction digest with Dpnll so as to remove the oligonucleotide adaptors.
  • the reaction product was then applied to a TAE gel and separated electrophoretically .
  • the separated DNA bands were cut out of the gel, the DNA was eluted and cloned into a vector cut with BamHI (pBS Not) .
  • the vector pBSNot-PVP of Example 1 is cleaved by BamHI, the DNA coding for (PVP) s isolated and inserted in the expression vector pQE-8 (Quiagen company) cleaved by BamHI.
  • the expression plasmid pQ/PVP is obtained.
  • Such a plasmid codes for a fusion protein comprising 6 histidine residues (N terminus partner) and the (PVP) of fig. 1 according to the invention (C terminus partner) .
  • pQ/PVP is used for transforming E. coli SG 13009 (cf. Gottesman, S. et al . , J. Bacteriol.
  • the bacteria are cultivated in an LB broth with 100 ⁇ g/ml ampicillin and 25 ⁇ g/ml kanamycin and induced with 60 ⁇ M isopropyl- ⁇ -D- thiogalactopyranoside (IPTG) for 4 h.
  • IPTG isopropyl- ⁇ -D- thiogalactopyranoside
  • 6 M guanidine hydrochloride serves for achieving lysis of the bacteria, thereafter a chromatography (Ni-NTA resin) is carried out with the lysate in the presence of 8 M urea corresponding to the instructions of the manufacturer (Quiagen company) of the chromatography material.
  • the bound fusion protein is eluted in a buffer having pH 3.5.
  • the fusion protein After its neutralization, the fusion protein is subjected to an 18 % SDS-polyacrylamide gel electrophoresis and dyed with Coomassie blue (cf. Thomas, J.O. and Kornberg, R.D., J. Mol . Biol. 149 (1975), 709-733).
  • a (fusion) protein according to the invention can be prepared in highly pure form.
  • Example 3 Preparation and detection of an antibody according to the invention
  • a fusion protein of Example 1 according to the invention is subjected to an 18 % SDS-polyacrylamide gel electrophoresis. After dyeing the gel using 4 M sodium acetate, an about 25 kD long band is cut out of the gel and incubated in phosphate-buffered common salt solution. Gel pieces are sedimented before the protein concentration of the supernatant is determined by SDS-polyacrylamide gel electrophoresis, which is followed by Coomassie blue dyeing. Animals are immunized with the gel -purified fusion protein as follows: Immunization protocol for polyclonal antibodies in rabbits
  • 35 ⁇ g gel-purified fusion protein are used per immunization in 0.7 ml PBS and 0.7 ml complete Freund's adjuvant and incomplete Freund's adjuvant, respectively, day 0: 1st immunization (complete Freund's adjuvant) day 14: 2nd immunization (incomplete Freund's adjuvant: icFA) day 28 3rd immunization (icFA) day 56 4th immunization (icFA) day 80 bleeding to death
  • the serum of the rabbit is tested in an immunoblot .
  • a fusion protein of Example 1 according to the invention is subjected to SDS-polyacrylamide gel electrophoresis and transferred to a nitrocellulose filter (cf. Khyse-Andersen, J., J. Biochem. Biophys . Meth . 10 (1984), 203-209) .
  • the Western blot analysis is carried out as described in Bock, C.-T. et al . , Virus Genes 8 (1994), 215-229) .
  • the nitrocellulose filter is incubated with a first antibody at 37°C for 1 h. This antibody is the serum of the rabbit (1:10000 in PBS) .
  • the nitrocellulose filter is incubated with a second antibody.
  • This antibody is a monoclonal goat anti -rabbit -IgG antibody coupled with alkaline phosphatase (Dianova company) (1:5000) in PBS.
  • a 30-minute incubation at 37°C is followed by several wash steps using PBS and then by the alkaline phosphatase detection reaction using developer solution (36 ⁇ M 5'- bromo-4-chloro-3 -indolylphosphate, 400 ⁇ M nitro blue tetrazolium, 100 mM Tris-HCl, pH 9.5, 100 M NaCl , 5 mM MgCl2) at room temperature, until bands are visible.
  • polyclonal antibodies according to the invention can be prepared. Immunization protocol for polyclonal antibodies in chickens
  • 40 ⁇ g gel-purified fusion protein are used per immunization in 0.8 ml PBS and 0.8 ml complete Freund's adjuvant and incomplete Freund's adjuvant, respectively.
  • Antibodies are extracted from yolk and tested in a Western blot . Polyclonal antibodies according to the invention are detected in this way.
  • 12 ⁇ g gel-purified fusion protein are used per immunization in 0.25 ml PBS and 0.25 ml complete Freund's adjuvant and incomplete Freund's adjuvant, respectively.
  • the fusion protein was dissolved in 0.5 ml (without adjuvant) in the 4th immunization.

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Abstract

The present invention relates to a protease-related protein which plays a role in the keratinization of hair, a DNA encoding the same and a process for the preparation thereof. Furthermore, this invention concerns the use of the DNA and the protein as well as antibodies directed against the protein and antagonistic substances.

Description

Protease- elated Protein
The present invention relates to a protease-related protein, a DNA encoding the same and a process for the preparation thereof In addition, this invention concerns the use of the DNA and the protein as well as antibodies directed against the protein
A hair anomaly is frequently due to an impaired keratimzation of hair It is known from investigations made with naked mice that the gene product of a gene referred to as whn is important for the keratimzation of hair This gene product is a transcription factor However, its target genes are not known In so far, it is not possible to interfere with the keratimzation of hair However, this would be desirable, particularly if the keratimzation of the hair is impaired
Therefore, it is the object of the present invention to provide a product by which the keracinization of hair can be investigated and optionally be regulated
According to the invention this is achieved by the subject matters defined m the claims
Thus, the subject matter of the present invention is represented by a protease-relateα protein, the protein comprising the ammo acid sequence of fig 1 or an ammo acid sequence differing therefrom Ό one or more ammo acids
The present invention is based on the applicant's finding that the gene product of the whn gene is responsible for regulating the expression of at least three genes. Two of these genes code for the known keratins Ha3 (cf Winter, H et al , Exp Cell Res 212 (1994) , 190-200) and CK15 (cf Nozaki, M et al , Gene 138 (1994) , 197-200) , respectively The third gene codes for a protein which has homologies with respect to a protease of the kallikrein family, optionally a protease activity, but differs from a known protease of the kallikrein family on the DNA level by hybridization under normal conditions. Such a protein has the amino acid sequence of fig. 1 or an amino acid sequence differing therefrom by one or more amino acids. Furthermore, the applicant has found that when the gene product of the whn gene is lacking the genes of Ha3 and CK15 are underexpressed whereas the gene of the above protein is overexpressed.
The above protein is referred to as "protease-related protein" (PVP) in the present invention.
Another subject matter of the present invention relates to a nucleic acid coding for a (PVP) . This may be an RNA or a DNA. The latter may be a genomic DNA or a cDNA, for example. Preferred is a DNA comprising the following:
(a) the DNA of fig. 1 or a DNA differing therefrom by one or more base pairs,
(b) a DNA hybridizing with the DNA of (a) , or
(c) a DNA related to the DNA of (a) or (b) via the degenerated genetic code.
The expression "hybridizing DNA" refers to a DNA which hybridizes with a DNA of (a) under normal conditions, particularly at 20°C below the melting point of the DNA.
A section of the DNA of fig. 1 was deposited with the DSMZ (Deutsche Sammlung von Mikroorganismen und Zellkul turen [German-type collection of microorganisms and cell cultures]) as pRDA2-la under DSM 11522 on April 23, 1997.
A DNA according to the invention is described below in the form of a cDNA. It stands as an example for every DNA falling under the present invention. For the production of a cDNA according to the invention it is favorable to isolate mRNA from skin cells of whn(+/+ ) mice and nu/nu (whn (-/-) ) mice, respectively, to transcribe the mRNA into cDNA and subject the cDNA to a "representational difference analysis" (RDA) method (cf Hubank, . and Schatz, D , Nucleic Acids Research 22 (1994) , 5640-5648) so as to identify that cDNA which is underexpressed and overexpressed, respectively, m nu/nu mice as compared to whn(+/+) mice In particular the latter cDNA represents a cDNA according to the invention.
A cDNA according to the invention may be present a vector and expression vector, respectively A person skilled the art is familiar with examples thereof In the case of an expression vector for E coli, these are e.g. pGEMEX, pUC derivatives, pGEX-2T, pET3b and pQE-8 For the expression yeast, pYlOO and Ycpadl have to be mentioned as examples, wnile for the expression animal cells, e.g. pKCR, pEFBOS , cDM8 and pCEV4 have to be indicated. For the expression m insect cells, the baculo virus expression vector pAcSGHisNT-A s especially suitable
The person skilled the art is familiar with suitable cells to express a cDNA according to tne invention, which is present an expression vector Examples of such cells comprise the E coli strains HB101, DH1 , xl776, J 101, JM 109, BL21 and SG 13009, the yeast strain saccharomyces cerevisiae and the animal cells Ltk, 3T3 , FM3A, CHO, COS, Vero and HeLa as well as the insect cells sf9
The person skilled the art knows which way a cDNA according to the invention has to be inserted m an expression vector He is also familiar with the fact that this DNA can be inserted connection with a DNA coding for another protein and peptide, respectively, so that the cDNA according to the invention can be expressed in the form of a fusion protein.
In addition, the person skilled in the art is familiar with conditions of cultivating transformed cells and transfected cells, respectively. He also knows processes serving for isolating and purifying the protein expressed by the cDNA according to the invention. Thus, such a protein which may also be a fusion protein represents a subject matter of the present invention as well.
Another subject matter of the present invention relates to an antibody directed against an above protein and fusion protein, respectively. Such an antibody may be prepared by conventional processes. It may be polyclonal and monoclonal, respectively. For its preparation it is favorable to immunize animals, particularly rabbits or chickens for a polyclonal antibody and mice for a monoclonal antibody, with an above (fusion) protein or fragments thereof . Further boosters of the animals can be effected with the same (fusion) protein or fragments thereof . The polyclonal antibody may then be obtained from the animals' serum and yolk, respectively. For the monoclonal antibody, spleen cells from the animals are fused with myeloma cells.
The present invention enables to investigate the keratinization of hair. (PVP) can be detected in cells, particularly skin cells, by means of an antibody according to the invention. A relation between (PVP) and the keratinization of hair can be established. Moreover, it is possible to detect by means of a (PVP) according to the invention an autoantibody directed against this protein. Both detections may be made by conventional processes, particularly a Western blot, an ELISA, an immunoprecipitation or by immunofluorescence . Furthermore, the expression of the gene coding for (PVP) can be detected by a nucleic acid according to the invention, particularly a DNA and primers derived therefrom This detection can be carried out as usual, particularly a Southern blot
In addition, the present invention s suited to interfere m regulating fashion with the keratinization of hair This regulation may be positive or negative A positive regulation is understood to mean one by which an impaired keratimzation of hair can be encountered A negative regulation would exist if a normal or strong keratimzation of hair was reduced
For a positive regulation of the keratinization of hair it is an obvious thing to use (PVP) the form of a substance inhibiting it This substance may be an antibody according to the invention Furthermore, it may be an anti-sense oligonucleotide which is suited for the expression inhibition of the gene coding for (PVP) Moreover, the substance may be a substance which has an antagonistic effect with respect to (PVP) It may be advantageous to use several substances It may be especially favorable to use additionally one or more of the proteins Ha3 and CK15 as such or the form of nucleic acids expressing them
For a negative regulation of the keratinization of hair, it is an obvious thing to use (PVP) as such or the form of a nucleic acid expressing it It mav oe advantageous to use additionally one or more of the proteins Ha3 and CK15 m the form of substances inhibiting tne^ Such substances may be antibodies directed against Ha3 and CK15, respectively, or anti-sense oligonucleotides which are suited for the expression inhibition of the genes coding for Ha3 and CK15, respectively The substances may also be those which have an antagonistic effect with respect to Ha3 and CK15, respectively
Another subject matter of the invention relates to a product which is suited for regulating the keratimzation of hair For the composition of such a product the above statements made on the positive and negative regulations of the keratinization of hair apply correspondingly.
Thus, the present invention represents a major contribution to the understanding of the keratinization of hair and a possible regulating interference.
Brief description of the drawing:
Fig. 1 shows the base sequence of a cDNA according to the invention as well as the amino acid sequence, derived therefrom, of a (PVP) according to the invention.
The present invention is explained by the below examples .
Example 1: Preparation of a cDNA according to the invention
A cDNA according to the invention was prepared according to the "representational difference analysis" (RDA) method. This method comprises the isolation of mRNA from skin cells of whn(+/+) mice and nu/nu mice, respectively, the transcription of the mRNA into cDNA, and the differentiation of the cDNA so as to identify that which is underexpressed and overexpressed, respectively, in nu/nu mice. In particular, the latter represents a cDNA according to the invention.
A) Sequence of the oligonucleotide adaptors
The following oligonucleotide adaptor pairs were required for the RDA:
R-Bgl-12: 5 ' -GATCTGCGGTGA-3 '
R-Bgl-24 : 5 ' -AGCACTCTCCAGCCTCTCACCGCA-3 R-Bgl-12: 5' -GATCTGTTCATG-3 '
R-Bgl-24 : 5 ' -ACCGACGTCGACTATCCATGAACA-3 '
N-Bgl-12: 5' -GATCTTCCCTCG-3 '
N-Bgl-24 : 5 ' -AGGCAACTGTGCTATCCGAGGGAA-3 '
B) Preparation of poly A-mRNA from the tissues to be compared with one another
RNA was initially obtained from the skin of whn(+/+ ) mice and nu/nu mice, respectively, according to the "single step RNA extraction" method (Chomczynski and Sacchi, 1987). Thereafter, the poly A-mRNA fractions from the two RNA populations were isolated by means of dynabeads olιgo(dT) according to the corresponding protocol from the Dynal company .
C) Synthesis of double- stranded cDNA
The "ribo clone cDNA synthesis kit" from the company of Promega was used for the synthesis of double- stranded whn(+/+) cDNA and nu/nu cDNA, respectively. 4 μg of poly A- mRNA were used each to obtain about 2 ug cDNA.
D) Difference analysis
1. Restriction digest of the double- stranded cDNAs
a) About 2 μg of each cDNA were digested a 100 μl reaction batch by the restriction endonuclease Dpnll at 37°C for 2 h
b) The reaction solutions were then extracted twice with a phenol /chloroform mixture (1:1) and once with 100 % chloroform
c) The DNA included the aqueous phases of the two reaction batches was admixed with 2 μg glycogen, o
50 μl 10 M ammonium acetate and 650 μl 100 % ethanol each and precipitated on ice for 20 min.
After 14 minutes of centrifugation at 4°C and with 14000 rpm, the supernatant was discarded and the DNA pellet was washed with 70 % ethanol. After another centrifugation and removal of the alcoholic phase, the dried DNA was resuspended in 20 μl TE buffer.
2. Ligation of the cDNAs to the R-Bgl oligonucleotide adaptor pair
a) A reaction vessel was used to combine the following :
20 μl cut cDNA (total reaction batch from item
D)lc)
8 μg R-Bgl-24
4 μg R-Bgl-12
6 μl 10 x ligase buffer x ul water
57 μl final volume
b) The reaction batch was heated in a thermocycler
(Peltier Thermocycler PTC-200, MJ Research) to 50°C, kept at this temperature for 1 min and then cooled again to 10 °C in the course of one hour (ramp rate: 0.1°C/9 sec) .
c) After adding 3 μl T4 DNA ligase (1 U/μl) , the mixture was incubated at 16°C overnight.
3. Synthesis of "representations" of the cDNA populations to be compared with one another
a) For generating what is called "representations" of the ligated cDNAs, the volume of the ligation batches from item 2c) was initially supplemented y
by the addition of 140 μl water each to give 200 μl.
Then, 30 reactions of 200 μl each were prepared from this dilute solution per cDNA population (whn(+/+) skin and nu/nu skin, respectively).
The following reactants were added successively to such a batch:
143 μl water
20 μl lOx PCR buffer
20 μl 2 mM dNTPs
10 μl 25 mM Mg chloride
2 μl R-Bgl-24 (1 μg/μl)
4 μl dilute ligation batch
b) PCR:
3 min: 72°C addition of 1 μl Taq-DNA polymerase (5 U/μl) 20 x: 5 min: 95°C 3 min: 72°C finally: cooling to 4°C.
c) For preparing the reaction solutions, 4 reaction batches each were combined a vessel . extraction: 2 x with 700 ul phenol/chloroform
(1:1) each, 1 x with chloroform
100 %; precipitation: addition of 75 ul 3 M Na-acetate solution (pH 5.3) and 800 μl 2- propanol to each reaction vessel,
20 min on ice. centrifugation: 14 min, 14000 rpm, 4°C. Washing of the DNA pellet with ethanol 70 % and resuspension in such an amount of water that a concentration of 0.5 μg/μl resulted. 4. Restriction digest of the "representations"
a) For removing the R-Bgl oligonucleotide adaptors, 300 μg of each representation (whn(+/+) skin and nu/nu skin, respectively) were subjected to a restriction digest. Following the addition of the below reactants, incubation was carried out at 37°C for 4 h:
600 μl cDNA representation (0.5 μg/μl)
140 μl 10 x Dpnll buffer
100 μl Dpnll (10 U/μl)
560 μl water.
b) The restriction digest batch was distributed to 2 vessels prior to its preparation.
Extraction: 2 x phenol/chloroform (1:1), 1 x chloroform 100 %; precipitation: addition of 70 μl 3 M Na-acetate
(pH 5.3), 700 μl 2-propanol to each vessel, 20 min on ice; centrifugation: 14 min, 14000 rpm, 4°C. Washing of the DNA pellet with ethanol 70 % and resuspension in such an amount of water that a concentration of 0.5 μg/μl resulted.
The resulting Dpnll -digested whn(+/+) skin-cDNA representation represented the driver-DNA population to be used in the subtractive hybridization .
5. Synthesis of the tester DNA population
a) 20 μg of the nu/nu skin-cDNA representation digested with Dpnll (= tester DNA) were separated electrophoretically in a TAE gel: 40 μl tester DNA (0.5 μg/μl) 50 μl TE buffer 10 μl 10 x loading buffer were applied to a 1.2 % agarose TAE gel. A voltage was applied to the gel until the bromophenol blue component of the loading buffer had migrated about 2 cm.
b) Thereafter, the bands containing the representation DNA were cut out of the gel and eluted by means of the "agarose gel DNA extraction kit" from the company of Boehringer Mannheim.
The DNA extracts were purified, so that a total of 60 μl of solution was obtained. The concentration of this solution was evaluated by electrophoresis of 5 μl in a 1 % agarose gel.
c) Finally, the tester DNA was ligated with the J oligonucleotide pair:
2 μg tester DNA eluate 6 μl 10 x ligase buffer 4 μl J-Bgl-24 (2 μg/μl)
4 μl J-Bgl-12 (1 μg/μl) x ul water
57 μl final volume
d) Transfer of the reaction batch into thermocycler.- 1 min: 50 °C cooling to 10°C within 1 h (ramp rate: 0.1°C/9 sec) .
e) After adding 3 μl T4 DNA ligase (1 U/μl) , incubation at 16°C overnight.
f) Adjusting the concentration of the tester DNA to approximately 10 ng/μl by the addition of 120 μl water . Subtractive hybridization
a) 80 μl of driver DNA (40 μg) from step 4. and 40 μl (0.4 μg) of dilute tester DNA from step 5., ligated with J oligonucleotides, were combined in a reaction vessel and extracted 2 x with phenol/chloroform (1:1) and once with chloroform 100 %.
b) Precipitation by addition of 30 μl of 10 M ammonium acetate, 380 μl of ethanol 100 % ; -70°C for 10 min.
Centrifugation: 14 min, 14000 rpm, 4°C.
Then: 2 x washing of the pellet with ethanol 70 %, short centrifugation after every wash step,- drying of the DNA pellet .
c) The DNA was resuspended in 4 μl EE x3 buffer (30 mM EPPS, pH 8.0, at 20 °C (Sigma company), 3 mM EDTA) - accompanied by pipetting off and on for about 2 min, then heating to 37°C for 5 min, short "vortexing" and finally combining the solution again on the vessel bottom by centrifugation. The solution was eventually covered with a layer consisting of 35 μl of mineral oil .
d) Transfer of the reaction batch into thermocycler: 5 min: 98 °C, cooling to 67 °C and immediate addition of 1 ul
5 M NaCl to the DNA,
20 h of incubation at 67°C. Synthesis of the first difference product
a) After removing the mineral oil as completely as possible, the DNA was diluted step-wise:
1. addition of 8 μl TE (+ 5 μg/μl yeast RNA)
2. addition of 25 μl TE - thereafter thorough mixing
3. addition of 362 μl TE - vortex.
b) 4 PCRs were prepared for every subtractive hybridization Per reaction
127 μl water
20 μl 10 x buffer
20 μl 2 mM dNTPs
5 ul 25 mM Mg chloride
20 μl dilute hybridization solution (from step
7a) )
c) PCR program:
3 mm: 72°C addition of 1 ul Taq DNA polymerase (5 U/μl) 5 mm: 72°C addition of 2 ul primer J-Bgl-24 (1 μg/μl) 10 x: 1 mm 95 °C
3 mm 70 °C finally- 10 mm 72°C, tnen cooling to room temperature
d) The 4 reaction batches were co omed m a 1.5 ml vessel . extraction- 2 x phenol/ cnioroform (1:1), 1 x chloroform 100%.
After the addition of 2 μg glycogen carrier:
Precipitation with 75 μl 3 M Na acetate (pH 5.3),
800 μl 2-propanol, 20 mm on ice.
Centrifugation 14 mm, 14000 rpm, 4°C.
Washing of the DNA pellet with ethanol 70 %. After drying of the DNA, resuspension in 40 μl water .
e) 20 μl of the resuspended DNA from d) were subjected to a "mung bean nuclease digest" (MBN) : 20 μl DNA
4 μl 10 x mung bean nuclease buffer (NEB company) 14 μl water
2 μl mung bean nuclease (10 U/μl; NEB company) 35 min, 30°C.
The reaction was discontinued by the addition of 160 ul 50 mM Tris-HCl (pH 8.9) and 5 minutes of incubation at 98°C. Thereafter, the vessel was placed on ice up to the next step.
f) During the MBN incubation, 4 further PCRs were prepared (on ice) :
127 μl water
20 μl 2 M dNTPs
10 μl 25 mM Mg chloride
2 μl J-Bgl-24 (1 μg/μl)
20 μl MBN-digested DNA.
g) PCR program: 1 min: 95°C allowing to cool to 80°C, addition of 1 μl Taq DNA polymerase (5 U/μl) , 18 x: 1 min: 95°C 3 min: 70 °C, finally: 10 min: 72°C; allowing to cool to 4°C.
h) The 4 PCR batches were combined in a vessel.
Extraction: 2 x phenol/chloroform (1:1), 1 x chloroform 100 %. Precipitation: 75 μl 3 M Na-acetate (pH 5.3), 800 μl 2-propanol, 20 min on ice. Centrifugation: 14 min, 14000 rpm, 4°C. Washing of the DNA pellet with ethanol 70 %. Resuspension of the DNA in 100 μl water (resulting concentration: 0.5 μg/μl); the solution obtained in this way represented the first difference product .
Exchange of the oligonucleotide adaptors of the difference product
a) Removal of the oligonucleotide adaptors by restriction digest with Dpnll :
40 μl difference product 1 (0.5 μg/μl) 30 μl 10 x Dpnll buffer 15 μl Dpnll (10 U/μl) 215 μl water
37°C for 2 h.
b) Preparing the reaction batch:
Extraction: 2 x phenol /chloroform (1:1), 1 x chloroform 100 %. Precipitation: 33 μl 3 M Na-acetate (pH 5.3), 800 μl ethanol 100 %, 20 min, -20°C. Centrifugation: 14 min, 14000 rpm, 4°C. Washing of the pellet in ethanol 70 % and resuspension in 40 μl water.
c) Ligation of the difference product to N- Bgl oligonucleotide adaptor pair
1 μl of the prepared DNA solution from step b) was diluted with 9 μl water to give a concentration of 50 ng/μl; 4 μl of this solution were used in the following reaction:
4 μl Dpnll-digested difference product 1 (200 ng) 6 μl 10 x ligase buffer 2.5 μl N-Bgl-24 (3.5 μg/μl)
2 μl N-Bgl-12 (2 μg/μl) 42.5 μl water . d) After the transfer of the reaction batch into thermocycler :
1 min: 50 °C, allowing to cool to 10 °C within one hour (ramp rate: 0. l°C/9 sec) .
e) After adding 3 μl T4 DNA ligase (1 μg/μl) , incubation at 16 °C overnight.
9. Synthesis of the 2nd difference product
The ligation batch from step 8e) was diluted by adding 100 μl water to a concentration of 1.25 ng/μl. 40 ul of this dilution (50 ng^ were mixed with 80 μl driver DNA (see item 4.) and treated again according to steps 6. to 8. When the oligonucleotide adaptors (step 8.; were changed, the J-Bgl oligonucleotides were ligated in this case to the newly formed difference product 2.
10. Synthesis of the 3rd difference product
The concentration of the difference product 2 ligated with the J-Bgl oligos was reduced to a concentration of 1 ng/μl . 10 μl of this solution were diluted again with 990 μl water (+ 30 μg yeast -RNA) , so that the concentration was then 10 pg/ul . The subtractive hybridization was carried out with 100 pg (10 μl) J- ligated difference product 2 and 40 μg (80 μl) driver DNA from step 4. As for the rest, the procedure was carried out as in the case of the 1st and 2nd difference products according to steps 6. to 8. The PCR according to the MBN reaction (item 7.g) formed an exception - here only 18 cycles in place of 22 ones were carried out . 11. Cloning of the 3rd difference product
The 3rd difference product was initially subjected to a restriction digest with Dpnll so as to remove the oligonucleotide adaptors. The reaction product was then applied to a TAE gel and separated electrophoretically . The separated DNA bands were cut out of the gel, the DNA was eluted and cloned into a vector cut with BamHI (pBS Not) .
12. Characterization of the difference products
In order to confirm that the cloned DNA fragments were not method artifacts but sequences which were actually included in the investigated DNA representations, Southern analyses were carried out in which the investigated cDNA representations were hybridized with the radioactively labeled cloning products.
Thereafter, those DNA fragments which proved to be "real" difference products m the Southern analysis, were investigated by means of Northern hybridizations: RNAs from the investigated tissues (whn(+/+) skm-cDNA and nu/nu skin-cDNA^ were blotted and hybridized with the radioactively labeled cloning products. By this, the differential expression of these sequences was confirmed in the investigated tissues. An analysis of the sequences yielded the cDNA of f g. 1 according to the invention.
Example 2 : Preparation and purification of a (PVP) according to the invention
For the preparation of a (PVP) according to the invention, the vector pBSNot-PVP of Example 1 is cleaved by BamHI, the DNA coding for (PVP) s isolated and inserted in the expression vector pQE-8 (Quiagen company) cleaved by BamHI. The expression plasmid pQ/PVP is obtained. Such a plasmid codes for a fusion protein comprising 6 histidine residues (N terminus partner) and the (PVP) of fig. 1 according to the invention (C terminus partner) . pQ/PVP is used for transforming E. coli SG 13009 (cf. Gottesman, S. et al . , J. Bacteriol. 148, (1981), 265-273). The bacteria are cultivated in an LB broth with 100 μg/ml ampicillin and 25 μg/ml kanamycin and induced with 60 μM isopropyl-β-D- thiogalactopyranoside (IPTG) for 4 h. The addition of 6 M guanidine hydrochloride serves for achieving lysis of the bacteria, thereafter a chromatography (Ni-NTA resin) is carried out with the lysate in the presence of 8 M urea corresponding to the instructions of the manufacturer (Quiagen company) of the chromatography material. The bound fusion protein is eluted in a buffer having pH 3.5. After its neutralization, the fusion protein is subjected to an 18 % SDS-polyacrylamide gel electrophoresis and dyed with Coomassie blue (cf. Thomas, J.O. and Kornberg, R.D., J. Mol . Biol. 149 (1975), 709-733).
In this way, a (fusion) protein according to the invention can be prepared in highly pure form.
Example 3 : Preparation and detection of an antibody according to the invention
A fusion protein of Example 1 according to the invention is subjected to an 18 % SDS-polyacrylamide gel electrophoresis. After dyeing the gel using 4 M sodium acetate, an about 25 kD long band is cut out of the gel and incubated in phosphate-buffered common salt solution. Gel pieces are sedimented before the protein concentration of the supernatant is determined by SDS-polyacrylamide gel electrophoresis, which is followed by Coomassie blue dyeing. Animals are immunized with the gel -purified fusion protein as follows: Immunization protocol for polyclonal antibodies in rabbits
35 μg gel-purified fusion protein are used per immunization in 0.7 ml PBS and 0.7 ml complete Freund's adjuvant and incomplete Freund's adjuvant, respectively, day 0: 1st immunization (complete Freund's adjuvant) day 14: 2nd immunization (incomplete Freund's adjuvant: icFA) day 28 3rd immunization (icFA) day 56 4th immunization (icFA) day 80 bleeding to death
The serum of the rabbit is tested in an immunoblot . For this purpose, a fusion protein of Example 1 according to the invention is subjected to SDS-polyacrylamide gel electrophoresis and transferred to a nitrocellulose filter (cf. Khyse-Andersen, J., J. Biochem. Biophys . Meth . 10 (1984), 203-209) . The Western blot analysis is carried out as described in Bock, C.-T. et al . , Virus Genes 8 (1994), 215-229) . For this purpose, the nitrocellulose filter is incubated with a first antibody at 37°C for 1 h. This antibody is the serum of the rabbit (1:10000 in PBS) . After several wash steps using PBS, the nitrocellulose filter is incubated with a second antibody. This antibody is a monoclonal goat anti -rabbit -IgG antibody coupled with alkaline phosphatase (Dianova company) (1:5000) in PBS. A 30-minute incubation at 37°C is followed by several wash steps using PBS and then by the alkaline phosphatase detection reaction using developer solution (36 μM 5'- bromo-4-chloro-3 -indolylphosphate, 400 μM nitro blue tetrazolium, 100 mM Tris-HCl, pH 9.5, 100 M NaCl , 5 mM MgCl2) at room temperature, until bands are visible.
In this way, the polyclonal antibodies according to the invention can be prepared. Immunization protocol for polyclonal antibodies in chickens
40 μg gel-purified fusion protein are used per immunization in 0.8 ml PBS and 0.8 ml complete Freund's adjuvant and incomplete Freund's adjuvant, respectively.
day 0: 1st immunization (complete Freund's adjuvant) day 28: 2nd immunization (incomplete Freund's adjuvant; icFA) day 50: 3rd immunization (icFA)
Antibodies are extracted from yolk and tested in a Western blot . Polyclonal antibodies according to the invention are detected in this way.
Immunization protocol for monoclonal mouse antibodies
12 μg gel-purified fusion protein are used per immunization in 0.25 ml PBS and 0.25 ml complete Freund's adjuvant and incomplete Freund's adjuvant, respectively. The fusion protein was dissolved in 0.5 ml (without adjuvant) in the 4th immunization.
day 0: 1st immunization (complete Freund's adjuvant) day 28: 2nd immunization (incomplete Freund's adjuvant; icFA) day 56: 3rd immunization (icFA) day 84: 4th immunization (PBS) day 87: fusion
Supernatants of hybridomas are tested in a Western blot. Monoclonal antibodies according to the invention are detected in this way.

Claims

Claims
1. A protease-related protein, the protein comprising the amino acid sequence of fig. 1 or an amino acid sequence differing therefrom by one or more amino acids .
2. A DNA coding for a protein according to claim 1, wherein the DNA comprises :
(a) the DNA of fig. 1 or a DNA differing therefrom by one or more base pairs,
(b) a DNA hybridizing with the DNA of (a) , or
(c) a DNA related to the DNA of (a) or (b) via the degenerated genetic code.
3. An expression plasmid comprising the DNA according to claim 2.
4. A transformant containing the expression plasmid according to claim 3.
5. A process for the preparation of the protein according to claim 1, comprising the cultivation of the transformant according to claim 4 under suitable conditions .
6. Antibodies directed against the protein according to claim 1.
7. Use of the protein according to claim 1 and the DNA according to claim 2 as well as the antibody according to claim 6 for detecting the keratinization of hair.
8. Use of the protein according to claim 1 for the negative regulation of the keratinization of hair.
9. Use according to claim 8, wherein the protein is present as such or in the form of a nucleic acid expressing it.
10. Use according to claim 8 or 9 , wherein substances are also used which inhibit the proteins Ha3 and/or CK15.
11. Use according to claim 10, wherein the substances are antibodies directed against Ha3 and CK15, respectively, and/or anti-sense oligonucleotides, all of which inhibit the expression of the nucleic acids encoding these proteins .
12. Use of the protein according to claim 1 for the positive regulation of the certification of hair.
13. Use according to claim 12 , wherein the protein is present in the form of a substance inhibiting it.
14. Use according to claim 13, wherein the substance is an antibody according to claim 6 and/or an anti-sense oligonucleotide which inhibits the expression of the nucleic acid encoding the protein.
15. Use according to any one of claims 12 to 14, wherein the proteins Ha3 and/or CK15 are also present as such or in the form of nucleic acids expressing them.
PCT/EP1998/005110 1997-08-20 1998-08-12 Protease-related protein WO1999009156A2 (en)

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EP98945221A EP1007677B1 (en) 1997-08-20 1998-08-12 Protease-related protein
AT98945221T ATE283358T1 (en) 1997-08-20 1998-08-12 PROTEASE-LIKE PROTEIN
DE69827808T DE69827808T2 (en) 1997-08-20 1998-08-12 PROTEASE-SIMILAR PROTEIN

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Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2001085964A2 (en) * 2000-05-11 2001-11-15 University Of Sheffield Over expression of the whn protein

Families Citing this family (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
DE19831043A1 (en) * 1998-07-13 2000-01-27 Deutsches Krebsforsch Inhibition of alopecia

Non-Patent Citations (3)

* Cited by examiner, † Cited by third party
Title
KUROOKA ET AL: "Rescue of the hairless phenotype in nude mice by transgenic insertion of the wild-type Hfh11 genomic locus" INTERNATIONAL IMMUNOLOGY, vol. 8, no. 6, 1996, pages 961-966, XP002093572 cited in the application *
NOZAKI ET AL: "The complete sequence of the gene encoding mouse cytokeratin 15" GENE, vol. 138, 1994, pages 197-200, XP002093573 cited in the application *
WINTER ET AL: "Sequence and Expression of Murine Type I Hair Keratins mHa2 and mHa3" EXPERIMENTAL CELL RESEARCH, vol. 212, 1994, pages 190-200, XP002093574 cited in the application *

Cited By (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2001085964A2 (en) * 2000-05-11 2001-11-15 University Of Sheffield Over expression of the whn protein
WO2001085964A3 (en) * 2000-05-11 2002-03-28 Univ Sheffield Over expression of the whn protein

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JP2002518991A (en) 2002-07-02
ATE283358T1 (en) 2004-12-15
DE69827808T2 (en) 2005-12-15
DE19736198C1 (en) 1998-12-24
EP1007677B1 (en) 2004-11-24
ES2235363T3 (en) 2005-07-01

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