WO1998030717A3 - Vegetal sequences including a polymorphic site and their uses - Google Patents

Vegetal sequences including a polymorphic site and their uses Download PDF

Info

Publication number
WO1998030717A3
WO1998030717A3 PCT/EP1997/007134 EP9707134W WO9830717A3 WO 1998030717 A3 WO1998030717 A3 WO 1998030717A3 EP 9707134 W EP9707134 W EP 9707134W WO 9830717 A3 WO9830717 A3 WO 9830717A3
Authority
WO
WIPO (PCT)
Prior art keywords
vegetal
polymorphic site
sequences including
segment
complement
Prior art date
Application number
PCT/EP1997/007134
Other languages
French (fr)
Other versions
WO1998030717A2 (en
Inventor
Alain Murigneux
Original Assignee
Biocem S A
Alain Murigneux
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Biocem S A, Alain Murigneux filed Critical Biocem S A
Priority to EP97955036A priority Critical patent/EP0944741A2/en
Priority to AU72066/98A priority patent/AU7206698A/en
Priority to CA002274317A priority patent/CA2274317A1/en
Publication of WO1998030717A2 publication Critical patent/WO1998030717A2/en
Publication of WO1998030717A3 publication Critical patent/WO1998030717A3/en

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6888—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
    • C12Q1/6895—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for plants, fungi or algae
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6827—Hybridisation assays for detection of mutation or polymorphism
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/156—Polymorphic or mutational markers

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Engineering & Computer Science (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Analytical Chemistry (AREA)
  • Biotechnology (AREA)
  • Microbiology (AREA)
  • Biochemistry (AREA)
  • Biophysics (AREA)
  • Molecular Biology (AREA)
  • Physics & Mathematics (AREA)
  • Genetics & Genomics (AREA)
  • General Health & Medical Sciences (AREA)
  • Immunology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • Botany (AREA)
  • Mycology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Pharmaceuticals Containing Other Organic And Inorganic Compounds (AREA)

Abstract

A nucleic acid segment comprising at least 10 contiguous nucleotides from a vegetal sequence including a polymorphic site; or the complement of the segment.
PCT/EP1997/007134 1996-12-02 1997-12-02 Vegetal sequences including a polymorphic site and their uses WO1998030717A2 (en)

Priority Applications (3)

Application Number Priority Date Filing Date Title
EP97955036A EP0944741A2 (en) 1996-12-02 1997-12-02 Vegetal sequences including a polymorphic site and their uses
AU72066/98A AU7206698A (en) 1996-12-02 1997-12-02 Vegetal sequences including a polymorphic site and their uses
CA002274317A CA2274317A1 (en) 1996-12-02 1997-12-02 Vegetal sequences including a polymorphic site and their uses

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US3206996P 1996-12-02 1996-12-02
US60/032,069 1996-12-02

Publications (2)

Publication Number Publication Date
WO1998030717A2 WO1998030717A2 (en) 1998-07-16
WO1998030717A3 true WO1998030717A3 (en) 1999-04-29

Family

ID=21862927

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/EP1997/007134 WO1998030717A2 (en) 1996-12-02 1997-12-02 Vegetal sequences including a polymorphic site and their uses

Country Status (4)

Country Link
EP (1) EP0944741A2 (en)
AU (1) AU7206698A (en)
CA (1) CA2274317A1 (en)
WO (1) WO1998030717A2 (en)

Families Citing this family (9)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
AU7206698A (en) * 1996-12-02 1998-08-03 Biocem S.A. Vegetal sequences including a polymorphic site and their uses
AU6414199A (en) * 1998-10-06 2000-04-26 Emory University Molecular diagnostics for galactosemia
US6670464B1 (en) * 1998-11-17 2003-12-30 Curagen Corporation Nucleic acids containing single nucleotide polymorphisms and methods of use thereof
AU1928801A (en) * 1999-11-24 2001-06-04 Curagen Corporation Nucleic acids containing single nucleotide polymorphisms and methods of use thereof
AU1940001A (en) * 1999-11-30 2001-06-12 Curagen Corporation Nucleic acids containing single nucleotide polymorphisms and methods of use thereof
CA2395786A1 (en) * 1999-12-27 2001-07-05 Curagen Corporation Nucleic acids containing single nucleotide polymorphisms and methods of use thereof
CA2395607A1 (en) * 2000-01-07 2001-07-19 Curagen Corporation Nucleic acids containing single nucleotide polymorphisms and methods of use thereof
EP2147012A4 (en) * 2007-05-17 2011-03-02 Monsanto Technology Llc Corn polymorphisms and methods of genotyping
EP2576823A1 (en) 2010-06-04 2013-04-10 Institut National De La Sante Et De La Recherche Medicale (Inserm) Constitutively active prolactin receptor variants as prognostic markers and therapeutic targets to prevent progression of hormone-dependent cancers towards hormone-independence

Citations (9)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP0317239A2 (en) * 1987-11-13 1989-05-24 Native Plants Incorporated Method and device for improved restriction fragment length polymorphism analysis
WO1989007647A1 (en) * 1988-02-22 1989-08-24 Pioneer Hi-Bred International, Inc. Genetic linkages between agronomically important genes and restriction fragment length polymorphisms
WO1992007948A1 (en) * 1990-11-06 1992-05-14 The Lubrizol Corporation Compositions and methods for analyzing genomic variation
US5332408A (en) * 1992-08-13 1994-07-26 Lakeside Biotechnology, Inc. Methods and reagents for backcross breeding of plants
US5437697A (en) * 1992-07-07 1995-08-01 E. I. Du Pont De Nemours And Company Method to identify genetic markers that are linked to agronomically important genes
EP0785281A1 (en) * 1995-07-28 1997-07-23 Sapporo Breweries Ltd. Method of genetic varietal differentiation of hop
WO1998024796A1 (en) * 1996-12-02 1998-06-11 Affymetrix Incorporated Brassica polymorphisms
WO1998030721A1 (en) * 1997-01-10 1998-07-16 Pioneer Hi-Bred International, Inc. Hybridization-based genetic amplification and analysis
WO1998030717A2 (en) * 1996-12-02 1998-07-16 Biocem S.A. Vegetal sequences including a polymorphic site and their uses

Patent Citations (9)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP0317239A2 (en) * 1987-11-13 1989-05-24 Native Plants Incorporated Method and device for improved restriction fragment length polymorphism analysis
WO1989007647A1 (en) * 1988-02-22 1989-08-24 Pioneer Hi-Bred International, Inc. Genetic linkages between agronomically important genes and restriction fragment length polymorphisms
WO1992007948A1 (en) * 1990-11-06 1992-05-14 The Lubrizol Corporation Compositions and methods for analyzing genomic variation
US5437697A (en) * 1992-07-07 1995-08-01 E. I. Du Pont De Nemours And Company Method to identify genetic markers that are linked to agronomically important genes
US5332408A (en) * 1992-08-13 1994-07-26 Lakeside Biotechnology, Inc. Methods and reagents for backcross breeding of plants
EP0785281A1 (en) * 1995-07-28 1997-07-23 Sapporo Breweries Ltd. Method of genetic varietal differentiation of hop
WO1998024796A1 (en) * 1996-12-02 1998-06-11 Affymetrix Incorporated Brassica polymorphisms
WO1998030717A2 (en) * 1996-12-02 1998-07-16 Biocem S.A. Vegetal sequences including a polymorphic site and their uses
WO1998030721A1 (en) * 1997-01-10 1998-07-16 Pioneer Hi-Bred International, Inc. Hybridization-based genetic amplification and analysis

Non-Patent Citations (7)

* Cited by examiner, † Cited by third party
Title
BECKMANN J S: "Oligonucleotide polymorphisms:A new tool for genomic genetics", BIO/TECHNOLOGY, vol. 6, 1988, pages 1061 - 1064, XP002085039 *
HANSON M A ET AL.: "Evolution of anthocyanin biosynthesis in maize kernels: The role of regulatory and enzymatic loci", GENETICS, vol. 143, 1996, pages 1395 - 1407, XP002085040 *
PLASCHKE J ET AL: "DETECTION OF GENETIC DIVERSITY IN CLOSELY RELATED BREAD WHEAT USING MICROSATELLITE MARKERS", THEORETICAL AND APPLIED GENETICS, vol. 91, no. 6/07, November 1995 (1995-11-01), pages 1001 - 1007, XP000604133 *
POWELL W ET AL: "HYPERVARIABLE MICROSATELLITES PROVIDE A GENERAL SOURCE OF POLYMORPHIC DNA MARKERS FOR THE CHLOROPLAST GENOME", CURRENT BIOLOGY, vol. 5, no. 9, 1 September 1995 (1995-09-01), pages 1023 - 1029, XP000570201 *
SENIOR M L ET AL: "MAPPING MAIZE MICROSATELLITES AND POLYMERASE CHAIN REACTION CONFIRMATION OF THE TARGETED REPEATS USING A CT PRIMER", GENOME, vol. 36, no. 5, 1 October 1993 (1993-10-01), pages 884 - 889, XP000569589 *
SHATTUCK-EIDENS D M ET AL.: "DNA sequence variation within maize and melon: Observations from polymerase chain reaction amplification and direct sequencing", GENETICS, vol. 126, 1990, pages 207 - 217, XP002085041 *
SHATTUCK-EIDENS D M ET AL.: "Rapid detection of maize DNA sequence varition", GENETIC ANALYSIS - TECHNIQUES AND APPLICATIONS, vol. 8, no. 8, 1991, pages 240 - 245, XP002085038 *

Also Published As

Publication number Publication date
CA2274317A1 (en) 1998-07-16
WO1998030717A2 (en) 1998-07-16
AU7206698A (en) 1998-08-03
EP0944741A2 (en) 1999-09-29

Similar Documents

Publication Publication Date Title
AU6042396A (en) Amplification of nucleic acid sequences
GB2332516A9 (en) Amplifying target nucleic acid sequences
ZA983109B (en) Polymer compositions having improved elongation.
NO893054L (en) PROCEDURE FOR EXPLAINING NUCLEOTIDE SEQUENCES.
EP1114148A4 (en) System for the rapid manipulation of nucleic acid sequences
AU3890795A (en) Improved method for nucleotide sequence amplification
AU5737296A (en) Method for deriving ribozymes from nucleotide sequences and ribozymes derived thereof
AU3602097A (en) Genes from 20q13 amplicon and their uses
AU2317095A (en) Dna sequences
AU3935599A (en) Method for amplifying at least a particular nucleotide sequence and primers used
AU3933393A (en) Nucleic acid sequences having single stranded ends
AU6092394A (en) Amplification of nucleic acid sequences
EP0656070A4 (en) Nucleic acid probes for bacteria of the genus legionella.
WO2000029623A3 (en) Nucleic acids containing single nucleotide polymorphisms and methods of use thereof
WO1998030717A3 (en) Vegetal sequences including a polymorphic site and their uses
AU4897896A (en) Primers for the pcr amplification of metastatic sequences
LTIP1519A (en) Solution, set, process for elongation of the oligonucleotidic primer, process of dna amplification
AU1443095A (en) Novel nucleic acid sequences isolated from glial cells
AU6144590A (en) Lactam-containing compositions and methods useful for the hybridization of nucleic acids
NO307705B1 (en) Substituted N-ethyl-glycine derivatives for the production of PNA and PNA/DNA hybrids, as well as the use of the same for the production of PNA and PNA/DNA hybrids
AU2540297A (en) Methods for enriching target nucleic acid sequences
ZA9710114B (en) Method for the expression of genes.
AU4942597A (en) Thermostable dna polymerase from (anaerocellum thermophilum)
WO1998044134A3 (en) Bacterial plasmids
AU1426392A (en) 5' and 3' polymerase chain reaction walking from known dna sequences

Legal Events

Date Code Title Description
AK Designated states

Kind code of ref document: A2

Designated state(s): AU CA US

AL Designated countries for regional patents

Kind code of ref document: A2

Designated state(s): AT BE CH DE DK ES FI FR GB GR IE IT LU MC NL PT SE

121 Ep: the epo has been informed by wipo that ep was designated in this application
AK Designated states

Kind code of ref document: A3

Designated state(s): AU CA US

AL Designated countries for regional patents

Kind code of ref document: A3

Designated state(s): AT BE CH DE DK ES FI FR GB GR IE IT LU MC NL PT SE

ENP Entry into the national phase

Ref document number: 2274317

Country of ref document: CA

Ref country code: CA

Ref document number: 2274317

Kind code of ref document: A

Format of ref document f/p: F

WWE Wipo information: entry into national phase

Ref document number: 1997955036

Country of ref document: EP

WWP Wipo information: published in national office

Ref document number: 1997955036

Country of ref document: EP

WWE Wipo information: entry into national phase

Ref document number: 09319401

Country of ref document: US

WWW Wipo information: withdrawn in national office

Ref document number: 1997955036

Country of ref document: EP