WO1998009988A1 - Process to prepare pharmaceutical compounds - Google Patents

Process to prepare pharmaceutical compounds Download PDF

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Publication number
WO1998009988A1
WO1998009988A1 PCT/US1997/015626 US9715626W WO9809988A1 WO 1998009988 A1 WO1998009988 A1 WO 1998009988A1 US 9715626 W US9715626 W US 9715626W WO 9809988 A1 WO9809988 A1 WO 9809988A1
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WIPO (PCT)
Prior art keywords
alkyl
formula
substituted
group
aromatic
Prior art date
Application number
PCT/US1997/015626
Other languages
French (fr)
Inventor
Michael J. Martinelli
Eric D. Moher
Original Assignee
Eli Lilly And Company
University Of Hawaii
Wayne State University
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Eli Lilly And Company, University Of Hawaii, Wayne State University filed Critical Eli Lilly And Company
Priority to IL12849797A priority Critical patent/IL128497A0/en
Priority to JP10512921A priority patent/JP2001500496A/en
Priority to EP97939810A priority patent/EP0956295A1/en
Priority to CA002264245A priority patent/CA2264245A1/en
Priority to HU0000291A priority patent/HUP0000291A3/en
Priority to AU41821/97A priority patent/AU4182197A/en
Priority to BR9712805-8A priority patent/BR9712805A/en
Publication of WO1998009988A1 publication Critical patent/WO1998009988A1/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K5/00Peptides containing up to four amino acids in a fully defined sequence; Derivatives thereof
    • C07K5/04Peptides containing up to four amino acids in a fully defined sequence; Derivatives thereof containing only normal peptide links
    • C07K5/12Cyclic peptides with only normal peptide bonds in the ring
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D273/00Heterocyclic compounds containing rings having nitrogen and oxygen atoms as the only ring hetero atoms, not provided for by groups C07D261/00 - C07D271/00

Definitions

  • This invention relates to the fields of pharmaceutical and organic chemistry and provides a process for preparing cryptophycin compounds .
  • Cryptophycin compounds are useful anti icrotubule agents. Such compounds can be useful for the treatment of cancer and neoplasms, and are thus useful pharmaceutical agents.
  • the cryptophycin compounds are known to exist as the epoxide, styrene, and chlorohydrin with reference to the R 1 and R 2 substituents in Formula I.
  • the synthesis of cryptophycin compounds typically results in the compound Formula I compound wherein R : and R 2 form a second bond (the styrene form) .
  • the styrene can be converted to the corresponding epoxide (R 1 and R 2 together form the epoxide) .
  • the epoxide can be stereoselectively opened using a number of nucleophiles, affording an S N -like inversion at the benzylic position.
  • the present invention provides a process for preparing the chlorohydrin diastereomer of Formula II directly without having to isolate the corresponding epoxide diastereomers.
  • the process not only eliminates a purification step, but it also provides a process wherein the isolation of the desired chlorohydrin can be completed using normal phase/normal pressure chromatography.
  • the process of this invention provides an efficient one-pot process for the preparation of a diastereomerically pure compound of Formula II:
  • G is C 1 -C 12 alkyl, C 2 -C 1? alkenyl, C 2 -C ⁇ ? alkynyl or Ar;
  • Ar is an aromatic or heteroaromatic group or a substituted aromatic or heteroaromatic group;
  • R 3 is C ⁇ -C 6 alkyl
  • R 4 and R 5 are H;
  • R 4 and R 5 taken together form a second bond between C-13 and C-14;
  • R 7 is H, C ⁇ -C 6 alkyl NR 51 R 52 , - (C]-C 3 -alkyl ) NR R 52 , or OR 51 ;
  • R 8 is H or C ⁇ -C 6 alkyl
  • R 7 and R 8 together form a cyclopropyl ring
  • R 51 and R 52 independently are C 1 -C3 alkyl;
  • R 9 is H, C ⁇ -C 6 alkyl, C -C 6 alkenyl, C -C 6 -alkynyl or (C ⁇ -C b alkyl) C 3 -C 5 cyeloalkyl;
  • R 10 is H or C ⁇ -C 6 alkyl
  • X is 0, NH or (d-Ca alkyl ) N- ;
  • Y is C, 0, NH, S, SO, S0 2 or (C1-C3 alkyl) N-;
  • R 6 is C ⁇ -C 6 alkyl, substituted (C,-C 6 ) alkyl, (C 3 - C 8 ) cyeloalkyl, substituted C 3 -C H cyeloalkyl, a heteroaromatic or substituted heteroaromatic group, or a group of formula Ilia, III' or III' ' :
  • R , R , and R ⁇ c independently are H, halo or OR lb ;
  • R 15 , R 16 , and R 17 independently are hydrogen, halo, (C ⁇ ⁇
  • R 18 and R 19 independently are hydrogen or C ⁇ -C b alkyl;
  • R 23 is hydrogen or (C ⁇ -C 3 ) alkyl
  • Z is -(CH 2 ) resort- or (C3-C5) cyeloalkyl; n is 0, 1, or 2; and
  • Z' is an aromatic or substituted aromatic group; comprising
  • flash chromatography is understood in the art. For example, flash chromatography can be completed using Si ⁇ 2 as the medium.
  • alkyl refers to an alkyl group with the designated number of carbon atoms. It may be saturated or unsaturated, and branched or straight chain.
  • alkyl groups examples include methyl, ethyl, n-propyl, isopropyl, n-butyl, propenyl, sec-butyl, n-pentyl, isobutyl, tert-butyl, sec-butyl, methyl-substituted butyl groups, pentyl, tert-pentyl, sec-pentyl, methyl-substituted pentyl groups and the like.
  • Substituted alkyl refers to a C ⁇ -C D alkyl group that may include up to three (3) substituents containing one or more heteroatoms. Examples of such substituents are OH,
  • R Z 1 wherein R 52 ⁇ 1 i s hydrogen , C C 3 alkyl or aryl.
  • cyeloalkyl refers to a saturated C-,-C& cyeloalkyl group.
  • a "substituted cyeloalkyl group” refers to a cyeloalkyl group having up to three alkyl, halo, or OR 21 substituents. The substituents may be attached at any available carbon atom. Cyclohexyl is an especially preferred cyeloalkyl group.
  • “Lower alkoxy” means a Ci-C ⁇ alkyl group bonded to an oxygen atom.
  • halo refers to Cl, Br, F, or I .
  • aromatic group and “heteroaromatic group” refer to common aromatic rings having 4n + 2 pi electrons in a monocyclic or bicyclic conjugated system.
  • aryl refers to an aromatic group
  • aralkyl refers to an aryl (C ⁇ -C 6 -alkyl ) group.
  • aromatic groups are phenyl, benzyl and naphthyl .
  • Heteroaromatic groups will contain one or more oxygen, nitrogen and/or sulfur atoms in the ring. Examples of heteroaromatic groups include furyl, pyrrolyl, thienyl, pyridyl and the like.
  • aromatic or heteroaromatic groups When the aromatic or heteroaromatic groups are substituted, they may have from one to three independently selected C1-C7 alkyl, C ⁇ -C 6 -alkoxy or halo substituents.
  • the substituents may be attached at any available carbon atom.
  • Especially preferred heterocyclic groups are
  • R 20 is hydrogen or C ⁇ -C 6 alkyl.
  • the process of this invention is preferably carried out in the presence of a solvent.
  • a solvent The skilled artisan can select appropriate solvents using standard methodologies .
  • the reaction time is related to the starting materials and operating temperature.
  • the optimum reaction time for a given process is, as always, a compromise which is determined by considering the competing goals of throughput, which is favored by short reaction times, and maximum yield, which is favored by long reaction times.
  • An especially preferred compound of Formula II is cryptophycin 55 (II) .
  • cryptophycin epi-55 are prepared from the preferred formula III compound cryptophycin 51.
  • the formula II compounds are prepared via epoxide intermediates, such as cryptophycins 52 and 53. The structures of these compounds are as follows:
  • TMS- Cl Chlorotrimethylsilane
  • Cryptophycin 55 was isolated as a white foam, 1.18 g, 51?,.

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  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Biochemistry (AREA)
  • Biophysics (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Medicinal Chemistry (AREA)
  • Molecular Biology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Pharmaceuticals Containing Other Organic And Inorganic Compounds (AREA)
  • Organic Low-Molecular-Weight Compounds And Preparation Thereof (AREA)
  • Epoxy Compounds (AREA)

Abstract

This invention provides a process for preparing diastereomerically pure cryptophycin compounds.

Description

PROCESS TO PREPARE PHARMACEUTICAL COMPOUNDS
This invention relates to the fields of pharmaceutical and organic chemistry and provides a process for preparing cryptophycin compounds . Cryptophycin compounds are useful anti icrotubule agents. Such compounds can be useful for the treatment of cancer and neoplasms, and are thus useful pharmaceutical agents.
The cryptophycin compounds are known to exist as the epoxide, styrene, and chlorohydrin with reference to the R1 and R2 substituents in Formula I.
Figure imgf000003_0001
(substituents defined as in Formula II infra )
The synthesis of cryptophycin compounds typically results in the compound Formula I compound wherein R: and R2 form a second bond (the styrene form) . The styrene can be converted to the corresponding epoxide (R1 and R2 together form the epoxide) . The epoxide can be stereoselectively opened using a number of nucleophiles, affording an SN -like inversion at the benzylic position.
However, the corresponding epoxide exists in two diastereomeric forms, as does the corresponding chlorohydrin (R1=C1; R=0H) . Often only one chlorohydrin diastereomer, such as Formula II infra, is desired.
Unfortunately, the separation of epoxide diastereomers required the use of high performance liquid chromatography . Separations requiring the use of high performance liquid chromatography are generally undesirable for large scale or commercial production of products.
The present invention provides a process for preparing the chlorohydrin diastereomer of Formula II directly without having to isolate the corresponding epoxide diastereomers. The process not only eliminates a purification step, but it also provides a process wherein the isolation of the desired chlorohydrin can be completed using normal phase/normal pressure chromatography. Thus, the process of this invention provides an efficient one-pot process for the preparation of a diastereomerically pure compound of Formula II:
Figure imgf000005_0001
II wherein
G is C1-C12 alkyl, C2-C1? alkenyl, C2-Cι? alkynyl or Ar; Ar is an aromatic or heteroaromatic group or a substituted aromatic or heteroaromatic group;
R3 is Cι-C6 alkyl;
R4 and R5 are H; or
R4 and R5 taken together form a second bond between C-13 and C-14;
R7 is H, Cι-C6 alkyl NR51R52, - (C]-C3-alkyl ) NR R52, or OR51; and
R8 is H or Cι-C6 alkyl; or
R7 and R8 together form a cyclopropyl ring;
R51 and R52 independently are C1-C3 alkyl; R9 is H, Cι-C6 alkyl, C -C6 alkenyl, C -C6-alkynyl or (Cι-Cb alkyl) C3-C5 cyeloalkyl;
R10 is H or Cι-C6 alkyl;
X is 0, NH or (d-Ca alkyl ) N- ;
Y is C, 0, NH, S, SO, S02 or (C1-C3 alkyl) N-; R6 is Cι-C6 alkyl, substituted (C,-C6) alkyl, (C3- C8) cyeloalkyl, substituted C3-CH cyeloalkyl, a heteroaromatic or substituted heteroaromatic group, or a group of formula Ilia, III' or III' ' :
Figure imgf000006_0001
R , R , and Rβc independently are H, halo or ORlb;
R15, R16, and R17 independently are hydrogen, halo, (Cι~
C6) alkyl, OR18, O-aryl, NH2, NR18R19, N02, OP04H,, (Cι-C6 alkoxy) phenyl, Sbenzyl, CONH2, C02H, P03H,, SO?R23, or Z ' ; R18 and R19 independently are hydrogen or Cι-Cb alkyl;
R23 is hydrogen or (Cι-C3) alkyl;
Z is -(CH2)„- or (C3-C5) cyeloalkyl; n is 0, 1, or 2; and
Z' is an aromatic or substituted aromatic group; comprising
1) reacting a compound of Formula III
Figure imgf000007_0001
III with ra-chloroperbenzoic acid (m-CPBA) ;
2) reacting the product with trimethylsilyl chloride; and 3) isolating the Formula II compound using flash chromatography .
The term "flash chromatography" is understood in the art. For example, flash chromatography can be completed using Siθ2 as the medium. The term "alkyl" refers to an alkyl group with the designated number of carbon atoms. It may be saturated or unsaturated, and branched or straight chain. Examples of such alkyl groups include methyl, ethyl, n-propyl, isopropyl, n-butyl, propenyl, sec-butyl, n-pentyl, isobutyl, tert-butyl, sec-butyl, methyl-substituted butyl groups, pentyl, tert-pentyl, sec-pentyl, methyl-substituted pentyl groups and the like.
"Substituted alkyl" refers to a Cι-CD alkyl group that may include up to three (3) substituents containing one or more heteroatoms. Examples of such substituents are OH,
NH2 , CONH , C02H, P03H2 and S 0?RZ 1 wherein R 52^1 i s hydrogen , C C3 alkyl or aryl.
The term "cyeloalkyl" refers to a saturated C-,-C& cyeloalkyl group. A "substituted cyeloalkyl group" refers to a cyeloalkyl group having up to three
Figure imgf000008_0001
alkyl, halo, or OR21 substituents. The substituents may be attached at any available carbon atom. Cyclohexyl is an especially preferred cyeloalkyl group.
"Lower alkoxy" means a Ci-C^ alkyl group bonded to an oxygen atom. The term "halo" refers to Cl, Br, F, or I .
The terms "aromatic group" and "heteroaromatic group" refer to common aromatic rings having 4n + 2 pi electrons in a monocyclic or bicyclic conjugated system. The term "aryl" refers to an aromatic group, and the term "aralkyl" refers to an aryl (Cι-C6-alkyl ) group. Examples of aromatic groups are phenyl, benzyl and naphthyl . Heteroaromatic groups will contain one or more oxygen, nitrogen and/or sulfur atoms in the ring. Examples of heteroaromatic groups include furyl, pyrrolyl, thienyl, pyridyl and the like. When the aromatic or heteroaromatic groups are substituted, they may have from one to three independently selected C1-C7 alkyl, Cι-C6-alkoxy or halo substituents. The substituents may be attached at any available carbon atom. Especially preferred heterocyclic groups are
Figure imgf000009_0001
wherein R20 is hydrogen or Cι-C6 alkyl.
The process of this invention is preferably carried out in the presence of a solvent. The skilled artisan can select appropriate solvents using standard methodologies .
The reaction time is related to the starting materials and operating temperature. The optimum reaction time for a given process is, as always, a compromise which is determined by considering the competing goals of throughput, which is favored by short reaction times, and maximum yield, which is favored by long reaction times.
An especially preferred compound of Formula II is cryptophycin 55 (II) . In this process, it is separated from the less preferred isomer, cryptophycin epi-55. These are prepared from the preferred formula III compound cryptophycin 51. The formula II compounds are prepared via epoxide intermediates, such as cryptophycins 52 and 53. The structures of these compounds are as follows:
Figure imgf000010_0001
CRYPTOPHYCIN 51
Figure imgf000010_0002
CRYPTOPHYCIN 52 CRYPTOPHYCIN 53
Figure imgf000010_0003
CRYPTOPHYCIN 55 CRYPTOPHYCIN epl-55
The following example is to illustrate the method of this invention.
Example 1 Preparation of Cryptophycin 55
A solution of the olefin cryptophycin 51 (2.15 g, 3.29 mmol) in CH2CI2 (11 mL) was cooled to 0 °C under nitrogen. m-CPBA (596 mg, 3.45 mmol) was added, and the solution was allowed to stir at 0 °C for 30 min, then at room temperature for 19.5 h. The reaction mixture was then diluted with CHCI3
(55 mL) and cooled to -60 °C. Chlorotrimethylsilane (TMS- Cl) (1.67 mL, 13.2 mmol) was then added dropwise, and the resulting mixture was stirred at the same temperature for 45 min. Another aliqout of TMS-C1 was added with continued stirring for a further 1.5 h. The reaction mixture was concentrated to dryness in vacuo and flash chromatographed over Siθ2 with hexane:EtOAc (1:1 to 1:2 to 1:3).
Cryptophycin 55 was isolated as a white foam, 1.18 g, 51?,.

Claims

Claims
1. A process for preparing a compound of Formula
II
Figure imgf000012_0001
II wherein
G is C1-C12 alkyl, C2-C12 alkenyl, C2-Cι2 alkynyl or Ar;
Ar is an aromatic or heteroaromatic group or a substituted aromatic or heteroaromatic group;
R3 is Cι-C6 alkyl;
R* and R5 are H; or
R4 and R5 taken together form a second bond between C-13 and
C-14; R7 is H, Cι-C6 alkyl NR51R52, - (Cι-C3-al yl) NR51R52, or OR51; and
RB is H or Cι-C6 alkyl; or
R7 and Rβ together form a cyclopropyl ring;
R51 and R52 independently are C1-C3 alkyl;
R9 is H, Cι-C6 alkyl, C2-C6 alkenyl, C2-C6-alkynyl or (Cι-C6 alkyl) C3-C5 cyeloalkyl; R10 is H or Cι-C6 alkyl;
X is 0, NH or (Cι-C3 alkyl)N-;
Y is C, 0, NH, S, SO, S02 or (C1-C3 alkyl )N-;
R6 is Cι-C6 alkyl, substituted (Cι-C6) alkyl, (C3-
C8) cyeloalkyl, substituted C3-C8 cyeloalkyl, a heteroaromatic or substituted heteroaromatic group, or a group of formula
Ilia, III' or III' ' :
Figure imgf000013_0001
R6a, R*, and R6c independently are H, halo or OR18; R15, R16, and R17 independently are hydrogen, halo, (Cj-
C6) alkyl, OR18, O-aryl, NH2, NR18R19, N02, OP04H2, (Ci-Cβ alkoxy) phenyl, Sbenzyl, C0NH2, C02H, P03H2, S02R23, or Z';
R18 and R19 independently are hydrogen or ) - C alkyl;
R23 is hydrogen or (Cj-C3) alkyl; Z is -(CH2)n- or (C3-C5) cyeloalkyl; n is 0, 1, or 2; and
Z' is an aromatic or substituted aromatic group; comprising
1) contacting a compound of Formula III
Figure imgf000014_0001
with m-chloroperbenzoic acid;
2) reacting the product with trimethylsilyl chloride; and 3) isolating the Formula II compound using flash chromatography.
2. A process of Claim 1 wherein Ar is an aromatic or substituted aromatic group.
3. A process of Claim 2 wherein Ar is phenyl
4. A process of Claim 1 wherein the flash chromatography process uses Siθ2.
5. The process of Claim 3 wherein the compound of Formula II is Cryptophycin 55.
Figure imgf000015_0001
CRYPTOPHYCIN 55
PCT/US1997/015626 1996-09-06 1997-09-05 Process to prepare pharmaceutical compounds WO1998009988A1 (en)

Priority Applications (7)

Application Number Priority Date Filing Date Title
IL12849797A IL128497A0 (en) 1996-09-06 1997-09-05 Process to prepare pharmaceuticals compounds
JP10512921A JP2001500496A (en) 1996-09-06 1997-09-05 Method for producing pharmaceutical compound
EP97939810A EP0956295A1 (en) 1996-09-06 1997-09-05 Process to prepare pharmaceutical compounds
CA002264245A CA2264245A1 (en) 1996-09-06 1997-09-05 Process to prepare pharmaceutical compounds
HU0000291A HUP0000291A3 (en) 1996-09-06 1997-09-05 Process to prepare cryptophycin compounds
AU41821/97A AU4182197A (en) 1996-09-06 1997-09-05 Process to prepare pharmaceutical compounds
BR9712805-8A BR9712805A (en) 1996-09-06 1997-09-05 Process for the preparation of pharmaceutical compounds

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US2543896P 1996-09-06 1996-09-06
US60/025,438 1996-09-06

Related Child Applications (1)

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US09/541,469 Continuation-In-Part US6252064B1 (en) 1996-09-06 2000-03-31 Process to prepare pharmaceutical compounds

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EP (1) EP0956295A1 (en)
JP (1) JP2001500496A (en)
KR (1) KR20010029474A (en)
AU (1) AU4182197A (en)
BR (1) BR9712805A (en)
CA (1) CA2264245A1 (en)
HU (1) HUP0000291A3 (en)
IL (1) IL128497A0 (en)
WO (1) WO1998009988A1 (en)

Cited By (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1998046581A1 (en) * 1997-04-11 1998-10-22 Eli Lilly And Company Synergistic method for treating cancer
EP2266607A2 (en) 1999-10-01 2010-12-29 Immunogen, Inc. Immunoconjugates for treating cancer

Families Citing this family (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
UA79293C2 (en) * 2002-07-03 2007-06-11 Univ Wayne State 4-(7'-halo-2-quino (xa-) linyloxy)phenoxy propionic acid derivatives as antineoplastic agents

Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1996040184A1 (en) * 1995-03-07 1996-12-19 University Of Hawaii New cryptophycins from synthesis

Family Cites Families (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
DE69427706T2 (en) * 1993-12-21 2001-10-25 Univ Hawaii Honolulu CRYPTOPHYCINE
AU4330097A (en) * 1996-08-30 1998-03-19 Eli Lilly And Company Pharmaceutical compounds
AU722492B2 (en) * 1996-08-30 2000-08-03 University Of Hawaii Pharmaceutical compounds

Patent Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1996040184A1 (en) * 1995-03-07 1996-12-19 University Of Hawaii New cryptophycins from synthesis

Cited By (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1998046581A1 (en) * 1997-04-11 1998-10-22 Eli Lilly And Company Synergistic method for treating cancer
EP2266607A2 (en) 1999-10-01 2010-12-29 Immunogen, Inc. Immunoconjugates for treating cancer
EP2289549A2 (en) 1999-10-01 2011-03-02 Immunogen, Inc. Immunoconjugates for treating cancer

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JP2001500496A (en) 2001-01-16
AU4182197A (en) 1998-03-26
BR9712805A (en) 1999-11-23
KR20010029474A (en) 2001-04-06
HUP0000291A2 (en) 2000-09-28
IL128497A0 (en) 2000-01-31
CA2264245A1 (en) 1998-03-12
HUP0000291A3 (en) 2000-10-30
EP0956295A1 (en) 1999-11-17
EP0956295A4 (en) 1999-12-22
US6252064B1 (en) 2001-06-26

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