WO1997034894A1 - Naphthyridine derivatives and their analogues inhibiting cytomegalovirus - Google Patents

Naphthyridine derivatives and their analogues inhibiting cytomegalovirus Download PDF

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Publication number
WO1997034894A1
WO1997034894A1 PCT/CA1997/000182 CA9700182W WO9734894A1 WO 1997034894 A1 WO1997034894 A1 WO 1997034894A1 CA 9700182 W CA9700182 W CA 9700182W WO 9734894 A1 WO9734894 A1 WO 9734894A1
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Prior art keywords
amino
halogen
alkoxy
alkyl
compound
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PCT/CA1997/000182
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French (fr)
Inventor
Haolun Jin
Laval Chun-Kong Chan
Wei Wang
Tomislav Stefanac
Tarek S. Mansour
Paul Nguyen-Ba
Jean-François LAVALLEE
Guy Falardeau
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Biochem Pharma Inc.
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Application filed by Biochem Pharma Inc. filed Critical Biochem Pharma Inc.
Priority to BR9708068-3A priority Critical patent/BR9708068A/en
Priority to AT97906955T priority patent/ATE260279T1/en
Priority to AU19187/97A priority patent/AU722650B2/en
Priority to EP97906955A priority patent/EP0984967B1/en
Priority to DE69727838T priority patent/DE69727838D1/en
Priority to JP53299797A priority patent/JP2001515464A/en
Priority to GB9819782A priority patent/GB2326412A/en
Priority to US08/923,604 priority patent/US5945431A/en
Publication of WO1997034894A1 publication Critical patent/WO1997034894A1/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D471/00Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00
    • C07D471/02Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00 in which the condensed system contains two hetero rings
    • C07D471/04Ortho-condensed systems
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P31/00Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
    • A61P31/12Antivirals
    • A61P31/20Antivirals for DNA viruses
    • A61P31/22Antivirals for DNA viruses for herpes viruses
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D215/00Heterocyclic compounds containing quinoline or hydrogenated quinoline ring systems
    • C07D215/02Heterocyclic compounds containing quinoline or hydrogenated quinoline ring systems having no bond between the ring nitrogen atom and a non-ring member or having only hydrogen atoms or carbon atoms directly attached to the ring nitrogen atom
    • C07D215/16Heterocyclic compounds containing quinoline or hydrogenated quinoline ring systems having no bond between the ring nitrogen atom and a non-ring member or having only hydrogen atoms or carbon atoms directly attached to the ring nitrogen atom with hetero atoms or with carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals, directly attached to ring carbon atoms
    • C07D215/48Carbon atoms having three bonds to hetero atoms with at the most one bond to halogen

Definitions

  • the present invention relates to heterocyclic compounds, and more particularly, to naphthyridine compounds and their use in therapy and prophylaxis of cytomegalovirus (CMV) infection.
  • CMV cytomegalovirus
  • herpes group is the source of the most common viral illnesses in man.
  • the group consists of herpes simplex virus (HSV) type I and II, varicella zoster (VZV), Epstein-Barr virus (EBV) and cytomegalovirus (CMV).
  • HSV herpes simplex virus
  • VZV varicella zoster
  • EBV Epstein-Barr virus
  • CMV cytomegalovirus
  • latent CMV can be re-activated resulting in microcephaly, hepatosplenomegaly, jaundice, convulsive seizures which may cause mental retardation, mononucleosis, retinitis and even death.
  • CMV is a predominant cause of morbidity.
  • herpesvirus infection including naturally occurring proteins and synthetic nucleoside analogs.
  • the natural antiviral protein, interferon has been used in the treatment of herpesvirus infections, as have the nucleoside analogs, cytosine-arabinoside, adenine- arabinoside, iodoxyuridine and acyclovir, which is presently the treatment of choice for herpes simpxex type I infection.
  • drugs such as acyclovir that have proven effective to treat certain herpesviruses infections are not sufficiently effective to treat CMV.
  • drugs currently used to treat CMV infection such as ganciclovir (9-[(1,3-dihyroxy-2-propoxy)methyl]guanine) and foscarnet (phosphonoformic acid)
  • ganciclovir 9-[(1,3-dihyroxy-2-propoxy)methyl]guanine
  • foscarnet phosphonoformic acid
  • prophylactic non-nucleoside agents effective to treat CMV infection. Accordingly, it is an object of the present invention to provide a method of inhibiting CMV
  • the present invention provides a method of inhibiting cytomegalovirus replication in a mammal comprising administering to said mammal an anti- cytomegaloviral amount of a compound of formula (I):
  • B is selected from the group consisting of;
  • A is O or S
  • R 1 is selected from:
  • R 2 and R' 2 are independently H, C 1-4 alkyl or R 1 and R 2
  • R 3 and R 4 are independently selected from H, OH, halogen, amino, cyano, C 1-6 (alkyl, alkoxy, acyl, acyloxy or alkoxycarbonyl) optionally substituted with OH, halogen, amino or C 1-4 alkoxy, and saturated or unsaturated C 3-10 (carbocycle or heterocycle) optionally substituted with OH, halogen, amino, mercapto, C 1-4 alkylthio, C 1-4 alkoxycarbonyl, halo-substituted C 1-4 alkyl or halo- substituted C 1-4 alkoxy, C 1-4 alkyl, C 1-4 alkoxy or carboxy;
  • R 5 is H, C 1-6 alkyl or C 1-6 acyl optionally substituted
  • n 0, 1 or 2.
  • R 1 is other than allyl or 2-methoxybenzyl
  • W is N or NR 5 ;
  • R 1 is other than methyl
  • the present invention provides a method of inhibiting cytomegalovirus replication in a mammal
  • one of X, Y, and Z is N or NR 5 while the other two are
  • R 1 is selected from:
  • heterocycle optionally substituted with OH, halogen, amino, mercapto, carboxy, C 1-4 (alkyl, alkoxy, alkylthio, acyl, acyloxy or alkoxycarbonyl)
  • R 2 is H, C 1 -4 alkyl or R 1 and R 2 together form a saturated or unsaturated 5 or 6 member heterocycle optionally fused to C 6-10 aryl or heteroaryl;
  • R 3 and R 4 are independently selected from H, OH, halogen, amino, cyano and C 1-6 (alkyl, alkoxy, acyl, acyloxy or alkoxycarbonyl) optionally substituted with OH, halogen, amino or C 1-4 alkoxy;
  • R 5 is H, C 1-6 alkyl or C 1 - 6 acyl optionally substituted
  • n 0, 1 or 2.
  • a method of inhibiting cytomegalovirus replication in a mammal comprising administering to said mammal an anti- cytomegaloviral amount of a compound of formula (VI):
  • a method of inhibiting cytomegalovirus replication in a mammal comprising administering to said mammal an anti- cytomegaloviral amount of a compound of formula (VII):
  • A is O or S and, W, X, Y, Z, R 1 to R 4 and n are defined herein.
  • cytomegalovirus inhibiting compounds and pharmaceutically acceptable salts thereof according to formula (I) ; (VI) ; (VI) or (VII).
  • anti-cytomegalovirus compositions comprising a
  • the present invention relates to compounds which inhibit CMV replication. These compounds are characterized by a heterobicyclic moiety as illustrated in formula (I), (V), (VI) or (VII):
  • alkyl refers to a saturated carbon chain which may be straight or branched.
  • alkenyl is a straight or branched carbon chain but incorporates unsaturated carbon atoms.
  • alkoxy is a straight or branched carbon chain but incorporates unsaturated carbon atoms.
  • alkylthio refers to chains that are either saturated or unsaturated and may also be straight or branched. Where indicated, any of the above mentioned chains may have various substituents. It is understood that there may be one or more substituents otherwise specified.
  • Carbocycle refers to a cyclic carbon chain or ring which is saturated or unsaturated.
  • a “heterocycle” is a ring incorporating heteroatoms selected from N, O and S in place of carbon. Unsaturated carbocycles and
  • heterocycles may be aromatic i.e. aryl such as phenyl or naphthyl, or heteroaryl such as pyridine or cruinoline.
  • any of the above mentioned rings may have various substitutions. It is understood that there may be one or more substituents unless otherwise specified.
  • amino includes primary amines i.e. NH 2 ,
  • NHR secondary amines
  • tertiary amines i.e. N(R) 2 wherein R is C 1-4 alkyl.
  • quaternary amines such as NH 3 + .
  • cytomegalovirus replication is inhibited by administering compounds of formula (I), (V), (VI), and (VII) as shown above, wherein:
  • the heterobicyclic compounds of the invention may be saturated, unsaturated or partially unsaturated and that W, X, Y and Z will have the
  • W when the rings are unsaturated, W may be N, CH or CR 3 . And conversely, when the rings are saturated W may be CH 2 ,
  • n 1
  • W is N or NR 5 ;
  • X is N or NR 5
  • Y is N or NR 5
  • Z is N or NR 5
  • W and Y are independently N or NR 5 while X and Z are
  • W and Y are both N while X and Z are CH or CR 4 and the heterobicyclic ring is unsaturated.
  • W and Y are both N while X and Z are CH or CR 4 , the heterobicyclic ring is unsaturated and n is 1, thereby forming a 1,6- naphthyridine ring.
  • A is O.
  • R 1 is selected from:
  • heterocycle optionally substituted with OH, halogen, amino, mercapto, carboxy, C 1-4 (alkyl, alkoxy, alkylthio, acyl, acyloxy or alkoxycarbonyl)
  • alkoxycarbonyl optionally substituted with OH, halogen, amino or C 1-4 alkoxy.
  • R 1 is C 2-6 alkenyl; C 1-6 alkyl or C 3-7 cycloalkyl substituted with a 6 member aryl or
  • heteroaryl or cycloalkyl ring optionally substituted with halogen, hydroxy, C 1-4 alkyl, C 1-4 alkoxy, C 1-4 alkylthio, C 1-4 alkoxycarbonyl, halo-substituted C 1-4 alkyl or halo- substituted C 1-4 alkoxy; and C 3-7 cycloalkyl fused to a 6 member aryl or heteroaryl ring optionally substituted with halogen, hydroxy, C 1-4 alkyl, C 1-4 alkoxy, C 1-4 alkylthio, C 1-4 alkoxycarbonyl or halo-substituted C 1-4 alkyl.
  • R 1 is benzyl, pyridinylmethyl or cyclohexylmethyl optionally substituted with one or two substituents selected from hydroxy; amino, in particular NH 2 or NH 3 + ; C 1-4 alkyl, in particular methyl; halogen, in particular fluoro, chloro or bromo; C 1- 4 alkoxy, in particular methoxy or ethoxy; C 1-4
  • R 1 is benzyl optionally mono or di-substituted at the 2, 3, 5 or 6 positions of the ring and most
  • R 1 is benzyl optionally substituted at the 2-position with fluoro, chloro, bromo, methyl, methoxy, ethoxy, methoxycarbonyl, trifluoromethyl or
  • R 1 is C 3-7 cycloalkyl substituted with phenyl which is optionally substituted with one or two substituents selected from hydroxy, amino, C 1-4 alkyl, halogen, C 1-4 alkoxy, C 1-4 alkoxycarbonyl, C 1-4 alkylthio or C 1-4 halo-substituted alkyl. More particularly preferred, the C 3-7 cycloalkyl is cyclopropyl.
  • R 1 is C 3-7 cycloalkyl fused to phenyl which is optionally substituted with one or two substituents selected from hydroxy, amino, C 1-4 alkyl, halogen, C 1-4 alkoxy, C 1-4 alkoxycarbonyl, C 1-4 alkylthio or C 1-4 halo-substituted alkyl. More particularly preferred, the C 3-7 cycloalkyl is cyclopentyl or
  • R 2 and R' 2 are independently H, C 1-4 alkyl or R 1 and R 2 together form a saturated or unsaturated 5 or 6 member heterocycle optionally fused to C 6-10 aryl or heteroaryl.
  • R 2 is H or methyl and most preferably H.
  • R' 2 is H or methyl and most preferably H In another preferred embodiment R 2 together with R 1 form a saturated or unsaturated 5 or 6 member heterocycle
  • Suitable 5 or 6 member heterocycles include piperidine, piperazine, morpholine, pyrrole, pyrazole and imidazole. These may be fused to a C 6-10 aryl or heteroaryl to give suitable bicyclic rings such as indole, purine, benzimidazole, quinoline or isoquinoline.
  • R 3 and R 4 are independently selected from H, OH, halogen, amino, cyano and C 1-6 (alkyl, alkoxy, acyl, acyloxy and alkoxycarbonyl) optionally substituted with OH, halogen, amino or C 1-4 alkoxy. It is appreciated that the ring incorporating X, Y and Z, may be substituted with one to four substituents R 4 while the ring incorporating W may be substituted with one to three substituents R 3 .
  • R 3 and R 4 are independently saturated or unsaturated C 3-10 (carbocycle or heterocycle) optionally substituted with OH, halogen, amino, mercapto, C 1-4 alkyl, C 1-4 alkoxy or carboxy;
  • R 3 and R 4 are independently 6 member aryl or heteroaryl or cycloalkyl ring optionally substituted with halogen, hydroxy, C 1-4 alkyl, C 1-4 alkoxy.
  • R 4 is a 6 member aryl or heteroaryl or cycloalkyl ring optionally substituted with halogen, hydroxy, C 1-4 alkyl, C 1-4 alkoxy. In a further embodiment, R 4 is a 6 membered heteroaryl. In a further embodiment, R 4 is pyridyl.
  • R 3 there is one R 3 substituent which is selected from H; OH; halogen, in particular fluoro or chloro; and C 1-4 alkoxy, in particular methoxy or ethoxy. More preferably, R 3 is H, chloro, hydroxy or methoxy and most preferably H.
  • R 4 is selected from H, halogen, amino, OH, C 1-6 (alkyl, alkoxy, acyl, acyloxy and
  • alkoxycarbonyl optionally substituted with OH, halogen or amino.
  • R 4 substituents there is one or two R 4 substituents and most preferably there is one R 4 substituent.
  • R 4 is amino
  • R 4 is C 1-4 aminoalkyl.
  • R 4 is OH.
  • R 4 is halogen
  • R 4 is methoxy
  • R 4 is H.
  • R 5 is H, C 1-6 alkyl or acyl optionally substituted with OH, halogen, amino or C 1-4 alkoxy.
  • R 5 is H.
  • R 5 is C 1-4 alkyl and more
  • R 5 is C 1-4 alkyl substituted with amino and more preferably methyl or ethyl substituted with NH 2 .
  • R 5 is C 1-4 acyl and more
  • R 5 is C 1-4 acyl substituted with amino and more preferably ethanoyl substituted with
  • Preferred compounds of the invention include: compound #1 N-(2-methylbenzyl)-2-
  • More Preferred compounds of this invention include: compound #2 N-benzyl-2-(1,6)naphthyridinecarboxamide; compound #4 N-(2-chlorobenzyl)-2-
  • Preferred compounds of this invention include:
  • the compounds of this invention include:
  • a preferred synthetic route for producing bicyclic compounds of formula VI involved coupling a bicyclic amino intermediate of formula c with an amido moiety d. This reaction is illustrated by scheme 2. The reaction will be under suitable condition for « urea » bond formation, ip. appropriate solvent to yield to compounds of formula Vila. Introduction of an R 2 substituent on the nitrogen can be done using methods known in the art. The urea bond of compounds Vlla and VIlb can also be converted to a thiourea by reacting the compounds with thionation agents as mentioned above.
  • Intermediates a, b and c may be obtained from commercial sources, for instance, 2-carboxy-[1,6] naphthyridine
  • R 3 or R 4 when R 3 or R 4 is hydroxyl, it may be necessary to protect it by converion to an alkoxy or an ester and subsequently deprotected.
  • Protective groups for other substituents are described m Protective Groups in Organic Synthesis, 2nd ed., Greene and Wuts, John Wiley & Sons, New York, 1991. It will be appreciated by those skilled in the art that the compounds of formula I, V, VI and VII, depending on the substituents, may contain one or more chiral centers and thus exist in the form of many different isomers, optical isomers (i.e. enantiomers) and mixtures thereof including racemic mixtures. All such isomers, enantiomers and mixtures thereof including racemic mixtures are included within the scope of the invention.
  • the present invention also provides anti-cytomegalovirus compositions which comprise a pharmaceutically acceptable carrier or adjuvant and an amount of a compound of formula I, V, VI and VII effective to inhibit CMV replication in a mammal.
  • a pharmaceutically acceptable carrier or adjuvant and an amount of a compound of formula I, V, VI and VII effective to inhibit CMV replication in a mammal.
  • the proportion of each carrier, diluent or adjuvant is determined by the solubility and chemical nature of the compound and the route of administration according to standard pharmaceutical practice.
  • Therapeutic and prophylactic methods of this invention comprise the step of treating patients in a
  • compositions may be in the form of tablets, capsules, caplets, powders, granules, lozenges, suppositories, reconstitutable powders, or liquid
  • Compounds of the invention may also be administered via an intraocular implant for treating retmitis as a result of CMV infection.
  • compounds may be embedded in a polymer based implant which will be release into the eye over an extended period of time.
  • a composition of the invention is in the form of a unit dose.
  • the unit dose presentation forms for oral administration may be tablets and capsules and may contain conventional excipients.
  • binding agents such as acacia, gelatin, sorbitol, or polyvinylpyrrolidone
  • fillers such as lactose, sugar, maize-starch, calcium phosphate, sorbitol or glycine;
  • tableting lubricants such as magnesium stearate
  • disintegrants such as starch, polyvinylpyrrolidone, sodium starch glycollate or microcrystalline cellulose; or pharmaceutically acceptable wetting agents such as sodium lauryl sulphate.
  • the compounds may be injected parenterally; this being intramuscularly, intravenously, or subcutaneously.
  • the compound may be used in the form of sterile solutions containing other solutes, for example, sufficient saline or glucose to make the solution isotonic.
  • the amount of active ingredient administered parenterally will be approximately 0.01 to 250 mg/kg/day, preferably about 1 to 10 mg/kg/day, more preferably about 0.5 to 30 mg/kg/day, and more most preferably about 1-20 mg/kg/day.
  • the compounds may be administered orally in the form of tablets, capsules, or granules containing suitable excipients such as starch, lactose, white sugar and the like.
  • the compounds may be administered orally in the form of solutions which may contain coloring and/or flavoring agents.
  • the compounds may also be administered
  • each active ingredient is mixed with sugar or corn syrups, flavoring agents and dyes, and then dehydrated
  • administered orally will depend on bioavailability of the specific compound.
  • the solid oral compositions may be prepared by:
  • the tablets may be coated according to methods well known in normal pharmaceutical practice, in particular with an enteric coating.
  • Oral liquid preparations may be in the form of emulsions, syrups, or elixirs, or may be presented as a dry product for reconstitution with water or other suitable vehicle before use.
  • Such liquid preparations may or may not contain conventional additives.
  • suspending agents such as sorbitol, syrup, methyl cellulose, gelatin, hydroxyethylcellulose, carboxymethylcellulose, aluminum stearate gel, or hydrogenated edible fats;
  • emulsifying agents such as sorbitan monooleate or acaci
  • non-aqueous vehicles which may include edible oils
  • edible oils such as almond oil, fractionated coconut oil, oily esters selected from the group consisting of glycerine, propylene glycol, ethylene glycol, and ethyl alcohol
  • preservatives for instance methyl para-hydroxybenzoate, ethyl para- hydroxybenzoate, n-propyl parahydroxybenzoate, or n-butyl parahydroxybenzoate of sorbic acid
  • conventional flavoring or coloring agents such as sorbitan monooleate or acaci
  • conventional flavoring or coloring agents such as sorbitan monooleate or acaci
  • fluid unit dosage forms may be prepared by utilizing the peptide and a sterile vehicle, and, depending on the concentration employed, may be either suspended or dissolved in the vehicle. Once in solution, the compound may be injected and filter
  • Adjuvants such as a local anesthetic, a preservative or a buffering agent, may be dissolved in the vehicle prior to use. Stability of the pharmaceutical composition may be enhanced by freezing the composition after filling the vial and removing the water under vacuum, (e.g., freeze drying the composition). Parenteral suspensions may be prepared in substantially the same manner, except that the peptide should be suspended in the vehicle rather than being dissolved, and, further, sterilization is not achievable by filtration. The compound may be sterilized, however, by exposing it to ethylene oxide before
  • a surfactant or wetting solution may be advantageously included in the composition to facilitate uniform distribution of the compound.
  • compositions of this invention comprise a cytomegalovirus replication inhibiting amount of a compounds of formula I, V, VI and VII and a
  • pharmaceutically acceptable carrier typically, they contain from about 0.1% to about 99% by weight of active compound, and preferably from about 10% to about 60% by weight depending on which method of administration is employed.
  • a cytomegalovirus replication inhibiting amount is that amount of active compound required to slow the progression of viral replication or reduce viral load from that which would otherwise occur without administration of said compound. Or, it is an amount of active compound required to slow the progression or reduce the intensity of symptoms resulting from CMV infection or elimination thereof.
  • Cytomegalovirus inhibiting activity of compounds of the invention can be determined according to the plaque reduction assay described in detail in the examples.
  • a compound having such activity will exhibit an IC 50 of approximately 50 ⁇ g/ml or less, preferably 25 ⁇ g/ml or less, more preferably 10 ⁇ g/ml or less, and most preferably less than 1 ⁇ g/ml .
  • Physicians will determine the dosage of the present therapeutic agents which will be most suitable. Dosages may vary with the mode of administration and the
  • the dosage may vary with the particular patient under treatment.
  • the dosage of the compound used in the treatment will vary, depending on viral load, the weight of the patient, the relative efficacy of the compound and the judgment of the treating physician. Such therapy may extend for several weeks or months, in an intermittent or uninterrupted manner.
  • trans-2-phenyl-cyclopropyl (trans-2-phenyl-cyclopropyl)-amide
  • a stirring mixture of trans-2-phenylcyclopropylamine hydrochloride (75.3 mg, 0.431) in anhydrous DMF (1.0 mL) was added triethylamine (60.0 ⁇ L, 0.431 mmol).
  • 2-[1,6]naphthyridinecarboxylic acid 50 mg, 0.287 mmol
  • 1-hydroxybenzotriazole hydrate (42.7 mg, 0.316 mmol)
  • 1-(3-dimethylaminopropyl)-3-ethylcarboiimide hydrochloride (61.8 mg, 0.316 mmol) were added
  • Chromium trioxide (15.50, 173. lo mmol) was added in one protion to a solution of pyridine (28 mL, 346.20 mmol) in dichloromethane (175 mL) at 0°C. The cooling bath was removed and the mixture was allowed to stir for 30 min. To that solution was then added a solution of the
  • LiHMDS in THF (1 M, 11.0 mL, 1 mmol) was added to a solution name (Lithrium 1,1,1,3,3,3-hexamethyldisilazane) of ketone (115 mg, 0.78 mmol) in THF (3 mL) at -78°C.
  • Methanesulfonyl chloride (0.18 ML, 2.37 mmol) was added to a solution of alcohol from step 3 (350 mg, 1.69 mmol) and triethylamine (0.35 mL, 2.54 mmol) in dichloromethane (10 mL) at 0°C. The mixture was then stirred at room temperature
  • N-ethyl-2-ammobenzon ⁇ tnle (0.4g, 2.7 mmol), 10% Pd/C (100 mg) is added in a dry flask followed by ethanol (15 mL). To this solution HCl was added (2.7 mL, 4M in
  • Triethylamine (0.095 mL, 0.68 mmol) was added to a solution of the salt (57 mg, 0.255 mmol) in DMF (1.5 mL) at room temperature. The solution was stirred for five minutes. Simultaneously, the acid (30 mg, 0.12 mmol), HOBT (25 mg, 0.19 mmol) and EDCI were added (36 mg, 0.19 mmol) The reaction was left to stir over night at room
  • Lawesson's reagent was added to a stirring solution of BCH-5024 (30mg, 0.09 mmol) in toluene (1.5 mL) (38 mg, 0.09 mmol). The solution was then heated to 90°C for 1h. The solvent was evaporated and the product was purified by flash chromatography (50% AcOEt/He to 100% AcOEt) to yield 25.8 mg of the thioamide derivative.
  • test compounds The anti-CMV activity of test compounds was evaluated in a laque reduction assay as follows: In 12-well tissue culture dishes, 1.5X10E5 or Hs68 cells (human lung fibrobla ⁇ t cell line) were plated per well with 2 ml of DMEM 10% fetal bovine serum and incubated in 5% CO 2 /air at 37°C overnight or until cells were ready. The medium was then removed and the cells inoculated with 0.5 ml (containing 200 pfu/ml diluted in DMEM 2% FBS) of HCMV virus in each well.
  • the cells were then incubated at 37°C for 8 days, and then fixed with one volume (1ml) of
  • DMEM medium contained 1% glutamine and 1% pen/strep
  • the percent of cell proliferation was determined by comparison to the control (no test compound) and thereby establishing 50% inhibitory concentration is established.
  • Compounds according to the invention where found to inhibit CMV according to the plaque reduction assay and compared favorably to ganciclovir. Results are summarized in table 1. The compounds were tested in tandem with ganciclovir which consistently showed an

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Abstract

The present invention relates to heterocyclic compounds, more particularly naphthyridine compounds having antiviral activity. In particular, compounds of formula (I) wherein B, W, X, Y, R1, R2, R3, R4, and n are as defined herein, are useful in the therapy and prophylaxis of cytomegalovirus (CMV) infection in mammals.

Description

Naphthyridine derivatives and their analogues inhibiting cytomegalovirus
FIELD OF THE INVENTION The present invention relates to heterocyclic compounds, and more particularly, to naphthyridine compounds and their use in therapy and prophylaxis of cytomegalovirus (CMV) infection. BACKGROUND OF THE INVENTION
Of the DNA viruses, the herpes group is the source of the most common viral illnesses in man. The group consists of herpes simplex virus (HSV) type I and II, varicella zoster (VZV), Epstein-Barr virus (EBV) and cytomegalovirus (CMV).
As with other herpes viruses, infection with CMV leads to a lifelong association of virus and host. Following a primary infection, virus may be shed for a number of years. Infection in otherwise healthy individuals is frequently asymptomatic, as 80% of the adult population harbor the virus in latent form. In immunocompromised individuals, such as chemotherapy patients, organ
transplant patients and in particular AIDS sufferers, latent CMV can be re-activated resulting in microcephaly, hepatosplenomegaly, jaundice, convulsive seizures which may cause mental retardation, mononucleosis, retinitis and even death. In AIDS patients, CMV is a predominant cause of morbidity.
A variety of drugs have been developed to treat
herpesvirus infection, including naturally occurring proteins and synthetic nucleoside analogs. For example, the natural antiviral protein, interferon, has been used in the treatment of herpesvirus infections, as have the nucleoside analogs, cytosine-arabinoside, adenine- arabinoside, iodoxyuridine and acyclovir, which is presently the treatment of choice for herpes simpxex type I infection.
Unfortunately, drugs such as acyclovir that have proven effective to treat certain herpesviruses infections are not sufficiently effective to treat CMV. And, drugs currently used to treat CMV infection, such as ganciclovir (9-[(1,3-dihyroxy-2-propoxy)methyl]guanine) and foscarnet (phosphonoformic acid), lack the acceptable side effect and safety profiles of the drugs approved for treatment of other herpesviruses.
Thus, there remains a need for therapeutic and
prophylactic non-nucleoside agents effective to treat CMV infection. Accordingly, it is an object of the present invention to provide a method of inhibiting CMV
replication in a mammal. It is also an object of the present invention to provide compounds and pharmaceutical compositions useful for inhibiting CMV replication in a mammal.
SUMMARY OF THE INVENTION
In one aspect, the present invention provides a method of inhibiting cytomegalovirus replication in a mammal comprising administering to said mammal an anti- cytomegaloviral amount of a compound of formula (I):
Figure imgf000004_0001
wherein
W is selected from CH, CR3, CH2, C=O, CHR3, N and NR5;
one of X, Y, and Z is N or NR5 while the other two are independently selected from CH, CR4, CH2, C=Oand CHR4; B is selected from the group consisting of;
Figure imgf000005_0001
wherein;
A is O or S;
R1 is selected from:
C1-6 alkyl, C2 - 6 alkenyl or C3-7 cycloalkyl
optionally substituted with OH, halogen, amino, carboxyl or saturated or unsaturated C3-10
(carbocycle or heterocycle) optionally substituted with OH, halogen, amino, mercapto, carboxy, C1-4 (alkyl, alkoxy, alkylthio, acyl, acyloxy or alkoxycarbonyl) optionally
substituted with OH, halogen, amino or C1-4 alkoxy,; and
C3-7 cycloalkyl fused to C6-10 aryl optionally substituted with OH, halogen, amino, mercapto, carboxy, C1-4 (alkyl, alkoxy, alkylthio, acyl, acyloxy or alkoxycarbonyl) optionally
substituted with OH, halogen, amino or C1-4 alkoxy;
R2 and R'2 are independently H, C1-4 alkyl or R1 and R2
together form a saturated or unsaturated 5 or 6 member heterocycle optionally fused to C6-10 aryl or
heteroaryl;
R3 and R4 are independently selected from H, OH, halogen, amino, cyano, C1-6 (alkyl, alkoxy, acyl, acyloxy or alkoxycarbonyl) optionally substituted with OH, halogen, amino or C1-4 alkoxy, and saturated or unsaturated C3-10 (carbocycle or heterocycle) optionally substituted with OH, halogen, amino, mercapto, C1-4 alkylthio, C1-4 alkoxycarbonyl, halo-substituted C1-4 alkyl or halo- substituted C1-4 alkoxy, C1-4 alkyl, C1-4 alkoxy or carboxy;
R5 is H, C1-6 alkyl or C1-6 acyl optionally substituted
with OH, halogen, amino or C1-4 alkoxy; and
n is 0, 1 or 2. In yet another aspect of the invention, there is provided cytomegalovirus inhibiting compounds and pharmaceutically acceptable salts thereof according to formula (I) provided that
i) when A is
Figure imgf000006_0001
and
when W and Y are both N or NR5, then R1 is other than allyl or 2-methoxybenzyl;
ii) when A is
Figure imgf000006_0002
when either X or Z is N or
NR5, then W is N or NR5; and
iii) when A is
Figure imgf000006_0003
when Z is N or NR5, then R1 is other than methyl.
DETAILED DESCRIPTION OF THE INVENTION In one aspect, the present invention provides a method of inhibiting cytomegalovirus replication in a mammal
comprising administering to said mammal an anti- cytomegaloviral amount of a compound of formula (V):
Figure imgf000006_0004
wherein W is selected from CH, CR3, CH2, C=O, CHR3, N ana NR5;
one of X, Y, and Z is N or NR5 while the other two are
independently selected from CH, CR4, CH2, C=Oand CHR4; R1 is selected from:
C1-6 alkyl, C2-6 alkenyl or C3-7 cycloalkyl optionally substituted with OH, halogen, amino, carboxyl or saturated or unsaturated C3-10 (carbocycle or
heterocycle) optionally substituted with OH, halogen, amino, mercapto, carboxy, C1-4 (alkyl, alkoxy, alkylthio, acyl, acyloxy or alkoxycarbonyl)
optionally substituted with OH, halogen, amino or C1-4 alkoxy,; and
C3-7 cycloalkyl fused to C6-10 aryl optionally
substituted with OH, halogen, amino, mercapto, carboxy, C1-4 (alkyl, alkoxy, alkylthio, acyl, acyloxy or alkoxycarbonyl) optionally substituted with OH, halogen, amino or C1-4 alkoxy;
R2 is H, C1 -4 alkyl or R1 and R2 together form a saturated or unsaturated 5 or 6 member heterocycle optionally fused to C6-10 aryl or heteroaryl;
R3 and R4 are independently selected from H, OH, halogen, amino, cyano and C1-6 (alkyl, alkoxy, acyl, acyloxy or alkoxycarbonyl) optionally substituted with OH, halogen, amino or C1-4 alkoxy;
R5 is H, C1-6 alkyl or C1 - 6 acyl optionally substituted
with OH, halogen, amino or C1-4 alkoxy; and
n is 0, 1 or 2.
In an other aspect of the invention, there is provided a method of inhibiting cytomegalovirus replication in a mammal comprising administering to said mammal an anti- cytomegaloviral amount of a compound of formula (VI):
Figure imgf000007_0001
wherein W, X, Y, Z, R1 to R4 and n are defined herein.
In an other aspect of the invention, there is provided a method of inhibiting cytomegalovirus replication in a mammal comprising administering to said mammal an anti- cytomegaloviral amount of a compound of formula (VII):
Figure imgf000008_0001
wherein A is O or S and, W, X, Y, Z, R1 to R4 and n are defined herein.
In yet another aspect of the invention, there is provided cytomegalovirus inhibiting compounds and pharmaceutically acceptable salts thereof according to formula (I) ; (VI) ; (VI) or (VII).
In another aspect of the invention, there is provided anti-cytomegalovirus compositions comprising a
pharmaceutically acceptable carrier, diluent or adjuvant and a compound of formula (I) ; (VI) ; (VI) or (VII) or a pharmaceutically acceptable salt thereof.
The present invention relates to compounds which inhibit CMV replication. These compounds are characterized by a heterobicyclic moiety as illustrated in formula (I), (V), (VI) or (VII):
Figure imgf000008_0002
Figure imgf000009_0001
wherein A, B, W, X, Y, Z, R1 to R4 and n are defined herein. The term "alkyl" as used throughout the specification refers to a saturated carbon chain which may be straight or branched. Similarly the term "alkenyl" is a straight or branched carbon chain but incorporates unsaturated carbon atoms. For convenience however, the terms "alkoxy",
"alkylthio", "acyl", "acyloxy" and "alkoxycarbonyl" refer to chains that are either saturated or unsaturated and may also be straight or branched. Where indicated, any of the above mentioned chains may have various substituents. It is understood that there may be one or more substituents
Figure imgf000009_0002
otherwise specified.
The term "carbocycle" refers to a cyclic carbon chain or ring which is saturated or unsaturated. A "heterocycle" is a ring incorporating heteroatoms selected from N, O and S in place of carbon. Unsaturated carbocycles and
heterocycles may be aromatic i.e. aryl such as phenyl or naphthyl, or heteroaryl such as pyridine or cruinoline.
Where indicated, any of the above mentioned rings may have various substitutions. It is understood that there may be one or more substituents unless otherwise specified.
The term "amino" includes primary amines i.e. NH2,
secondary amines i.e. NHR, or tertiary amines i.e. N(R)2 wherein R is C1-4 alkyl. Also encompassed by the term are quaternary amines such as NH3 +.
In methods of the present invention, cytomegalovirus replication is inhibited by administering compounds of formula (I), (V), (VI), and (VII) as shown above, wherein:
W is selected from CH, CR3, CH2, C=O, CHR3, N and NR5; and one of X, Y, and Z is N or NR5 while the other two are independently selected from CH, CR4, CH2, C=Oand CHR4. It will be appreciated that the heterobicyclic compounds of the invention may be saturated, unsaturated or partially unsaturated and that W, X, Y and Z will have the
appropriate valency for each condition. For example, when the rings are unsaturated, W may be N, CH or CR3. And conversely, when the rings are saturated W may be CH2,
C=O, CHR3, NH or NR5. The same principle applies for X, Y and Z.
In a preferred embodiment n is 1.
In a preferred embodiment W is N or NR5;
In a preferred embodiment X is N or NR5, while Y and Z are independently CH, CR4, CH2, C=Oor CHR4.
In a preferred embodiment Y is N or NR5, while X and Z are independently CH, CR4, CH2, C=Oor CHR4.
In a preferred embodiment Z is N or NR5, while X and Y are independently CH, CR4, CH2, C=Oor CHR4.
In a preferred embodiment the heterobicyclic ring
incorporating W, X, Y and Z is unsaturated. In a particularly preferred embodiment, W and Y are independently N or NR5 while X and Z are
independently CH, CR4, CH2, C=Oor CHR4.
In a particularly preferred embodiment, W and Y are both N while X and Z are CH or CR4 and the heterobicyclic ring is unsaturated.
In a most preferred embodiment, W and Y are both N while X and Z are CH or CR4, the heterobicyclic ring is unsaturated and n is 1, thereby forming a 1,6- naphthyridine ring.
In a preferred embodiment, A is O.
R1 is selected from:
C1-6 alkyl, C2-6 alkenyl or C3-7 cycloalkyl optionally
substituted with OH, halogen, amino, carboxyl or saturated or unsaturated C3-10 (carbocycle or
heterocycle) optionally substituted with OH, halogen, amino, mercapto, carboxy, C1-4 (alkyl, alkoxy, alkylthio, acyl, acyloxy or alkoxycarbonyl)
optionally substituted with OH, halogen, amino or C1-4 alkoxy,; and
C3-7 cycloalkyl fused to C6-10 aryl optionally substituted with OH, halogen, amino, mercapto, carboxy, C1-4 (alkyl, alkoxy, alkylthio, acyl, acyloxy or
alkoxycarbonyl) optionally substituted with OH, halogen, amino or C1-4 alkoxy.
In a preferred embodiment R1 is C2-6 alkenyl; C1-6 alkyl or C3-7 cycloalkyl substituted with a 6 member aryl or
heteroaryl or cycloalkyl ring optionally substituted with halogen, hydroxy, C1-4 alkyl, C1-4 alkoxy, C1-4 alkylthio, C1-4 alkoxycarbonyl, halo-substituted C1-4 alkyl or halo- substituted C1-4 alkoxy; and C3-7 cycloalkyl fused to a 6 member aryl or heteroaryl ring optionally substituted with halogen, hydroxy, C1-4 alkyl, C1-4 alkoxy, C1-4 alkylthio, C1-4 alkoxycarbonyl or halo-substituted C1-4 alkyl. In a particularly preferred embodiment, R1 is benzyl, pyridinylmethyl or cyclohexylmethyl optionally substituted with one or two substituents selected from hydroxy; amino, in particular NH2 or NH3 +; C1-4 alkyl, in particular methyl; halogen, in particular fluoro, chloro or bromo; C1- 4 alkoxy, in particular methoxy or ethoxy; C1-4
alkoxycarbonyl, in particular methoxycarbonyl; C1-4 alkylthio, in particular methylthio; C1-4 halo-substituted alkyl, in particular trifluoromethyl. More particularly preferred, R1 is benzyl optionally mono or di-substituted at the 2, 3, 5 or 6 positions of the ring and most
preferably at the 2 and/or 6 positions with methyl, methoxy, ethoxy, hydroxy, fluoro, bromo, chloro,
methoxycarbonyl, methylthio, trifluoromethyl,
trifluoromethoxy, NH2 or NH3 +Cl-. In an even more
preferred embodiment, R1 is benzyl optionally substituted at the 2-position with fluoro, chloro, bromo, methyl, methoxy, ethoxy, methoxycarbonyl, trifluoromethyl or
NH3 +Cl-.
In another particularly preferred embodiment, R1 is C3-7 cycloalkyl substituted with phenyl which is optionally substituted with one or two substituents selected from hydroxy, amino, C1-4 alkyl, halogen, C1-4 alkoxy, C1-4 alkoxycarbonyl, C1-4 alkylthio or C1-4 halo-substituted alkyl. More particularly preferred, the C3-7 cycloalkyl is cyclopropyl.
In another particularly preferred embodiment, R1 is C3-7 cycloalkyl fused to phenyl which is optionally substituted with one or two substituents selected from hydroxy, amino, C1-4 alkyl, halogen, C1-4 alkoxy, C1-4 alkoxycarbonyl, C1-4 alkylthio or C1-4 halo-substituted alkyl. More particularly preferred, the C3-7 cycloalkyl is cyclopentyl or
cyclohexyl.
R2 and R'2 are independently H, C1-4 alkyl or R1 and R2 together form a saturated or unsaturated 5 or 6 member heterocycle optionally fused to C6-10 aryl or heteroaryl. In a preferred embodiment R2 is H or methyl and most preferably H. R'2 is H or methyl and most preferably H In another preferred embodiment R2 together with R1 form a saturated or unsaturated 5 or 6 member heterocycle
optionally fused to C6-10 aryl or heteroaryl. Suitable 5 or 6 member heterocycles include piperidine, piperazine, morpholine, pyrrole, pyrazole and imidazole. These may be fused to a C6-10 aryl or heteroaryl to give suitable bicyclic rings such as indole, purine, benzimidazole, quinoline or isoquinoline.
R3 and R4 are independently selected from H, OH, halogen, amino, cyano and C1-6 (alkyl, alkoxy, acyl, acyloxy and alkoxycarbonyl) optionally substituted with OH, halogen, amino or C1-4 alkoxy. It is appreciated that the ring incorporating X, Y and Z, may be substituted with one to four substituents R4 while the ring incorporating W may be substituted with one to three substituents R3.
R3 and R4 are independently saturated or unsaturated C3-10 (carbocycle or heterocycle) optionally substituted with OH, halogen, amino, mercapto, C1-4 alkyl, C1-4 alkoxy or carboxy;
In an alternative embodiment, R3 and R4 are independently 6 member aryl or heteroaryl or cycloalkyl ring optionally substituted with halogen, hydroxy, C1-4 alkyl, C1-4 alkoxy.
In an alternative embodiment, R4 is a 6 member aryl or heteroaryl or cycloalkyl ring optionally substituted with halogen, hydroxy, C1-4 alkyl, C1-4 alkoxy. In a further embodiment, R4 is a 6 membered heteroaryl. In a further embodiment, R4 is pyridyl.
In a preferred embodiment, there is one R3 substituent which is selected from H; OH; halogen, in particular fluoro or chloro; and C1-4 alkoxy, in particular methoxy or ethoxy. More preferably, R3 is H, chloro, hydroxy or methoxy and most preferably H. In a preferred embodiment, R4 is selected from H, halogen, amino, OH, C1-6 (alkyl, alkoxy, acyl, acyloxy and
alkoxycarbonyl) optionally substituted with OH, halogen or amino. Preferably, there is one or two R4 substituents and most preferably there is one R4 substituent.
In a more preferred embodiment R4 is amino.
In a more preferred embodiment R4 is C1-4 aminoalkyl.
In a more preferred embodiment R4 is OH.
In a more preferred embodiment R4 is halogen.
In a more preferred embodiment R4 is methoxy.
In a most preferred embodiment R4 is H.
R5 is H, C1-6 alkyl or acyl optionally substituted with OH, halogen, amino or C1-4 alkoxy.
In a preferred embodiment R5 is H.
In a preferred embodiment R5 is C1-4 alkyl and more
preferably methyl.
In a preferred embodiment R5 is C1-4 alkyl substituted with amino and more preferably methyl or ethyl substituted with NH2.
In a preferred embodiment R5 is C1-4 acyl and more
preferably ethanoyl.
In a preferred embodiment R5 is C1-4 acyl substituted with amino and more preferably ethanoyl substituted with
NH2.
Preferred compounds of the invention include: compound #1 N-(2-methylbenzyl)-2-
(1,6)naphthyridinecarboxamide; compound #2 N-benzyl-2-(1,6)naphthyridinecarboxamide; compound #3 N-(2-bromobenzyl)-2-[1,6]naphthyridine- carboxamide
compound #4 N-(2-chlorobenzyl)-2-
(1,6)naphthyridinecarboxamide; compound #5 N-(2-bromobenzyl)-2-
(1,6)naphthyridinecarboxamide; compound #6 N-(3-bromobenzyl)-2-
(1,6)naphthyridinecarboxamide; compound #7 N-(2-fluorobenzyl)-2- (1,6)naphthyridinecarboxamide;
Compound #8 N-(4-chlorobenzyl)-2-[1,6]naphthyridine- carboxamide; compound #9 N-(2-ethyloxybenzyl)-2-(1,6)naphthyridine- carboxamide; compound #10 [1,6]naphthyridine-2-carboxylic acid indan- 1-ylamide compound #11 [1,6]naphthyridine-2-carboxylic acid
(1,2,3,4-tetrahydro-naphthalen-1-yl)-amide compound #12 N-(3-methoxybenzyl)-2-
(1,6)naphthyridinecarboxamide; compound #13 N-(2-trifluoromethylbenzyl)-2- (1,6)naphthyridinecarboxamide; compound #14 N-(2,6-dimethoxybenzyl)-2- (1,6)naphthyridinecarboxamide; compound #15 [1,6]naphthyridine-2-carboxylic acid
(trans-2-phenyl-cyclopropyl)-amide compound #16 N-(2-amino-6-fluorobenzyl)-2- [1,6]naphthyridinecarboxamide compound #17 [1,6]naphthyridine-2-carboxylic acid (1- phenyl-ethyl) amide; compound #18 [1,6]naphthyridine-2-carboxylic acid
(pyridine-2-ylmethyl) amide compound #19 [1,6]naphthyridine-2-carboxylic acid
cyclohexyl-methylamide compound #20 (3,4-dihydro-lh-isoquinolin-2-yl)-
[1,6]naphthyridin-2-yl-methanone compound #21 N-(2-methylthiobenzyl)-2-[1,6]naphthyridine carboxamide
compound #22 N-(2-hydroxybenzy1)-2-(1,6)naphthyridine- carboxamide; compound #23 N-(2-methoxycarbonylbenzyl)-2- (1,6)naphthyridinecarboxamide; compound #24 (1,6)naphthyridine-2-carboxylic acid
allylamide (PFC-029) ; compound #25 N-(2-methoxybenzyl)-2- (1,6)naphthyridinecarboxamide; compound #26 N-(2propoxybenzyl)-2-[1,6]naphthyridine-2- carboxamide; compound #27 (2-{[([1,6]naphthyridine-2-carbonyl)- amino]-methyl}-phenyl)-carbonic acid tert- butyl ester; compound #28 [1,6]Naphthyridine-2-carboxylic acid
(2,3,4,5-tetrahydrobenzo[B]oxepin-5-yl)- amide ; compound #29 [1,6]Naphthyridine-2-carboxylic acid
(chroman-4-yl)-amide ; compound #30 N-(2'-methoxybenzyl)-5-amino-2- [1,6] naphthyridinecarboxamide; compound #31 [1,6]Naphthyridine-2-carboxylic acid 2,3- (methylenedioxy)-benzylamide ; compound #32 7,8-dihydroisoquinolin-6-carboxylic acid
2'-methoxybenzylamide; compound #33 8-bromo-[1,6]naphthyridine-2-carboxylic acid (2-N-ethylaminobenzylamine); compound #34 8-bromo-[1,6]naphthyridine-2-carboxylie acid (2-isopropoxybenzylamine); compound #35 8-bromo-[1,6]naphthyridine-2-carboxylic acid (2-methoxybenzylamine); compound #36 8-chloro-[1,6]naphthyridine-2-carboxylic acid (2-isopropoxybenzylamine); compound #37 8-chloro-[1,6]naphthyridine-2-carboxylic acid (2-N-ethylaminobenzylamine); compound #38 8-(2pyridyl)-[1,6]naphthyridine-2- carboxylic acid (2--isopropoxybenzylamine); compound #39 [1,6]Naphthyridine-2-thiocarboxylic acid-2- trifluoromethylbenzylamine compound #40 [1,6]Naphthyridine-2-thiocarboxylic acid-2- isopropoxybenzylamine; compound #41 [1,6]Naphthyridine-2-thiocarboxylic acid-3- methoxybenzylamine; compound #42 8-bromo-[1,6]Naphthyridine-2-thiocarboxylic acid-2-isopropoxybenzylamine;
compound #43 [1,6]Naphthyridine-2-thiocarboxylic acid 2- methoxy-benzylamide ; compound #44 [1,6]Naphthyridine-2-thiocarboxylic acid 2- ethoxy-benzylamide ; compound #45 [1,6]Naphthyridine-2-thiocarboxylic acid-2- methoxy-cyclohexylmethyl-amide;
compound #46 1-(2-iso-propoxy-phenyl)-3-
[1,6]naphthyridin-2-yl-urea;
compound #47 1-(2-iso-propoxybenzyl)-3-
[1,6]naphthyridin-2-yl-urea; compound #48 1-(N-boc-4-aminobutyl)-3-[1,6]naphthyridin- 2-yl-urea; compound #49 1-(4-aminobutyl)-3-[1,6]naphthyridin-2-yl- urea hydrochloride; compound #50 1-[(s)-α-methylbenzyl]-3-[1,6]naphthyridin- 2-yl-urea; compound #51 1-[(R)-α-methylbenzyl]-3-[1,6]naphthyridin- 2-yl-urea; compound #52 1-(2-methoxy-phenyl)-3-[1,6]naphthyridin-2- yl-urea; compound #53 1-butyl-3-[1,6]naphthyridin-2-yl-urea; compound #54 1-(2-methoxybenzyl)-3-[1,6]naphthyridin-2- yl-urea; compound #55 1-(2-ethoxy-phenyl)-3-[1,6]naphthyridin-2- yl-urea;
Compound #56 1-(2-methyl-phenyl)-3-[1,6]naphthyridin-2- yl-urea; and
Compound #57 8-(2-pyridyl)-[1,6]naphthyridine-2- carboxylic acid (2-isopropoxybenzylamine).
More Preferred compounds of this invention include: compound #2 N-benzyl-2-(1,6)naphthyridinecarboxamide; compound #4 N-(2-chlorobenzyl)-2-
(1,6)naphthyridinecarboxamide; compound #12 N-(3-methoxybenzyl)-2-
(1,6)naphthyridinecarboxamide; compound #14 N-(2,6-dimethoxybenzy1)-2-(1,6)naphtnyndine- carboxamide; compound #19 [1,6]naphthyridine-2-carboxylic acid cyclohexyl-methylamide compound #24 (1,6)naphthyridine-2-carboxylic acid allylamide (PFC-029) ; compound #25 N-(2-methoxybenzyl)-2-
(1,6)naphthyridinecarboxamide; compound #26 N-(2propoxybenzyl)-2-[1,6]naphthyridine-2
carboxamide; compound #28 [1,6]Naphthyridine-2-carboxylic acid
(2 , 3 , 4 , 5 - tetrahydrobenzo[B]oxepin- 5 -yl) amide ; compound #31 [1,6]Naphthyridine-2-carboxylic acid 2,3- (methylenedioxy)-benzylamide ; compound #32 7,8-dihydroisoquinolin-6-carboxylic acid 2'- methoxybenzylamide; compound #33 8-bromo-[1,6]naphthyridine-2-carboxylic acid
(2-N-ethylaminobenzylamine); compound #35 8-bromo-[1,6]naphthyridine-2-carboxylic acid
(2-methoxybenzylamine); compound #36 8-chloro-[1,6]naphthyridine-2-carboxylic
acid (2-isopropoxybenzylamine); compound #40 [1,6]Naphthyridine-2-thiocarboxylic acid-2 isopropoxybenzylamine; compound #43 [1,6]Naphthyridine-2-thiocarboxylic acid 2- methoxy-benzylamide ; compound #46 1-(2-iso-propoxy-phenyl)-3-[1,6]naphthyridin-
2-yl-urea;
compound #47 1-(2-iso-propoxybenzyl)-3-[1,6]naphthyridin-
2-yl-urea; and compound #51 1-[(R)-α-methylbenzyl]-3-[1,6]naphthyridin-2- yl-urea.
Most Preferred compounds of this invention include:
compound #26 N-(2-propoxybenzyl)-2-[1,6]naphthyridine¬carboxamide; compound #32 7,8-dihydroisoquinolin-6-carboxylic acid 2'- methoxybenzylamide; compound #33 8-bromo-[1,6]naphthyridine-2-carboxylic acid
(2-N-ethylaminobenzylamine); compound #36 8-chloro-[1,6]naphthyridine-2-carboxylic
acid (2-isopropoxybenzylamine)' compound #40 [1,6]Naphthyridine-2-thiocarboxylic acid-2- isopropoxybenzylamine; compound #43 [1,6]Naphthyridine-2-thiocarboxylic acid 2- methoxy-benzylamide ; compound #46 1-(2-iso-propoxy-phenyl)-3-[1,6]naphthyridin-
2-yl-urea;
compound #47 1-(2-iso-propoxybenzyl)-3-[1,6]naphthyridin-
2-yl-urea; and compound #51 1-[(R)-α-methylbenzyl]-3-[1,6]naphthyridin-2- yl-urea.
In a further preferred embodiemnt, the compounds of this invention include:
compound #26 N-(2propoxybenzyl)-2-[1,6]naphthyridine-2- carboxamide; compound #32 7,8-dihydroisoquinolin-6-carboxylic acid 2'- methoxybenzylamide; compound #33 8-bromo-[1,6]naphthyridine-2-carboxylic acid
(2-N-ethylaminobenzylamine); compound #40 [1,6]Naphthyridine-2-thiocarboxylic acid-2- isopropoxybenzylamine; and compound #46 1-(2-iso-propoxy-phenyl)-3-[1,6]naphthyridin- 2-yl-urea.
Compounds of the present invention can be synthesized using conventional preparative steps and recovery methods known to those skilled in the art of organic chemistry. A preferred synthetic route for producing compounds of formula V. involves coupling a carboxylic acid
intermediate of formula a with an amino intermediate of formula b. The reaction will be under suitable conditions for amide bond formation i.e. in the presence of a suitable coupling agent such as EDC or dCC, to yield final compound of formula V. The reaction is illustrated in scheme 1. Compounds of formula V can be converted to compounds of formula VI by reacting them with thionation agents such as Lawesson's reagent. The use of Lawesson's reagent is well known m the art (for example, see
Synthesis, 941 (1979); Tetrahedron, 35, 2433 (1979); and Tet . Lett . , 21, 4061 (1980). A preferred synthetic route for producing bicyclic compounds of formula VI involved coupling a bicyclic amino intermediate of formula c with an amido moiety d. This reaction is illustrated by scheme 2. The reaction will be under suitable condition for « urea » bond formation, ip. appropriate solvent to yield to compounds of formula Vila. Introduction of an R2 substituent on the nitrogen can be done using methods known in the art. The urea bond of compounds Vlla and VIlb can also be converted to a thiourea by reacting the compounds with thionation agents as mentioned above.
Figure imgf000024_0001
wherein X, Y, Z, R1 to R4 and n are as previously defined.
Intermediates a, b and c may be obtained from commercial sources, for instance, 2-carboxy-[1,6] naphthyridine
(Peakdale Fine Chemicals, Glossop, Derbyshire UK, PFC- 027); 6,7-dibromo-4-hydroxy-[1,5] naphthyridine-2- carboxylic acid (Pomorski et al Rocz. Chem., 1974,
48 (2) : 321); 1,2,3,4-tetrahydro-8-hydroxy- [1,6]naphthyridine-2-carboxylic acid (Abe et al Tet.
Lett., 1977, 9:735). Or, alternatively intermediates a, b and c may be prepared according to established synthetic techniques.
Figure imgf000025_0001
It will be appreciated that certain substituents require protection during the course of the synthesis and
subsequent deprotection. For example, when R3 or R4 is hydroxyl, it may be necessary to protect it by converion to an alkoxy or an ester and subsequently deprotected. Protective groups for other substituents are described m Protective Groups in Organic Synthesis, 2nd ed., Greene and Wuts, John Wiley & Sons, New York, 1991. It will be appreciated by those skilled in the art that the compounds of formula I, V, VI and VII, depending on the substituents, may contain one or more chiral centers and thus exist in the form of many different isomers, optical isomers (i.e. enantiomers) and mixtures thereof including racemic mixtures. All such isomers, enantiomers and mixtures thereof including racemic mixtures are included within the scope of the invention.
The present invention also provides anti-cytomegalovirus compositions which comprise a pharmaceutically acceptable carrier or adjuvant and an amount of a compound of formula I, V, VI and VII effective to inhibit CMV replication in a mammal. The proportion of each carrier, diluent or adjuvant is determined by the solubility and chemical nature of the compound and the route of administration according to standard pharmaceutical practice.
Therapeutic and prophylactic methods of this invention comprise the step of treating patients in a
pharmaceutically acceptable manner with those compounds or compositions. Such compositions may be in the form of tablets, capsules, caplets, powders, granules, lozenges, suppositories, reconstitutable powders, or liquid
preparations, such as oral or sterile parenteral solutions or suspensions. Compounds of the invention may also be administered via an intraocular implant for treating retmitis as a result of CMV infection. In particular, compounds may be embedded in a polymer based implant which will be release into the eye over an extended period of time.
In order to obtain consistency of administration, it is preferred that a composition of the invention is in the form of a unit dose. The unit dose presentation forms for oral administration may be tablets and capsules and may contain conventional excipients. For example, binding agents, such as acacia, gelatin, sorbitol, or polyvinylpyrrolidone; fillers, such as lactose, sugar, maize-starch, calcium phosphate, sorbitol or glycine;
tableting lubricants such as magnesium stearate;
disintegrants, such as starch, polyvinylpyrrolidone, sodium starch glycollate or microcrystalline cellulose; or pharmaceutically acceptable wetting agents such as sodium lauryl sulphate.
The compounds may be injected parenterally; this being intramuscularly, intravenously, or subcutaneously. For parenteral administration, the compound may be used in the form of sterile solutions containing other solutes, for example, sufficient saline or glucose to make the solution isotonic. The amount of active ingredient administered parenterally will be approximately 0.01 to 250 mg/kg/day, preferably about 1 to 10 mg/kg/day, more preferably about 0.5 to 30 mg/kg/day, and more most preferably about 1-20 mg/kg/day. The compounds may be administered orally in the form of tablets, capsules, or granules containing suitable excipients such as starch, lactose, white sugar and the like. The compounds may be administered orally in the form of solutions which may contain coloring and/or flavoring agents. The compounds may also be administered
sublingually in the form of tracheas or lozenges in which each active ingredient is mixed with sugar or corn syrups, flavoring agents and dyes, and then dehydrated
sufficiently to make the mixture suitable for pressing into solid form. The amount of active ingredient
administered orally will depend on bioavailability of the specific compound.
The solid oral compositions may be prepared by
conventional methods of blending, filling, tableting, or the like. Repeated blending operations may be used to distribute the active agent throughout those compositions employing large quantities of fillers. Such operations are, of course, conventional in the art. The tablets may be coated according to methods well known in normal pharmaceutical practice, in particular with an enteric coating.
Oral liquid preparations may be in the form of emulsions, syrups, or elixirs, or may be presented as a dry product for reconstitution with water or other suitable vehicle before use. Such liquid preparations may or may not contain conventional additives. For example suspending agents, such as sorbitol, syrup, methyl cellulose, gelatin, hydroxyethylcellulose, carboxymethylcellulose, aluminum stearate gel, or hydrogenated edible fats;
emulsifying agents, such as sorbitan monooleate or acaci; non-aqueous vehicles (which may include edible oils), such as almond oil, fractionated coconut oil, oily esters selected from the group consisting of glycerine, propylene glycol, ethylene glycol, and ethyl alcohol; preservatives, for instance methyl para-hydroxybenzoate, ethyl para- hydroxybenzoate, n-propyl parahydroxybenzoate, or n-butyl parahydroxybenzoate of sorbic acid; and, if desired, conventional flavoring or coloring agents.
For parenteral administration, fluid unit dosage forms may be prepared by utilizing the peptide and a sterile vehicle, and, depending on the concentration employed, may be either suspended or dissolved in the vehicle. Once in solution, the compound may be injected and filter
erilized before filling a suitable vial or ampoule and subsequently sealing the carrier or storage package.
Adjuvants, such as a local anesthetic, a preservative or a buffering agent, may be dissolved in the vehicle prior to use. Stability of the pharmaceutical composition may be enhanced by freezing the composition after filling the vial and removing the water under vacuum, (e.g., freeze drying the composition). Parenteral suspensions may be prepared in substantially the same manner, except that the peptide should be suspended in the vehicle rather than being dissolved, and, further, sterilization is not achievable by filtration. The compound may be sterilized, however, by exposing it to ethylene oxide before
suspending it in the sterile vehicle. A surfactant or wetting solution may be advantageously included in the composition to facilitate uniform distribution of the compound.
The pharmaceutical compositions of this invention comprise a cytomegalovirus replication inhibiting amount of a compounds of formula I, V, VI and VII and a
pharmaceutically acceptable carrier, diluent or adjuvant. Typically, they contain from about 0.1% to about 99% by weight of active compound, and preferably from about 10% to about 60% by weight depending on which method of administration is employed.
A cytomegalovirus replication inhibiting amount is that amount of active compound required to slow the progression of viral replication or reduce viral load from that which would otherwise occur without administration of said compound. Or, it is an amount of active compound required to slow the progression or reduce the intensity of symptoms resulting from CMV infection or elimination thereof.
Cytomegalovirus inhibiting activity of compounds of the invention can be determined according to the plaque reduction assay described in detail in the examples.
Under these particular conditions, a compound having such activity will exhibit an IC50 of approximately 50 μg/ml or less, preferably 25 μg/ml or less, more preferably 10 μg/ml or less, and most preferably less than 1 μg/ml .
Physicians will determine the dosage of the present therapeutic agents which will be most suitable. Dosages may vary with the mode of administration and the
particular compound chosen. In addition, the dosage may vary with the particular patient under treatment. The dosage of the compound used in the treatment will vary, depending on viral load, the weight of the patient, the relative efficacy of the compound and the judgment of the treating physician. Such therapy may extend for several weeks or months, in an intermittent or uninterrupted manner.
To further assist in understanding the present invention, the following non-limiting examples are provided.
EXAMPLE 1 Synthesis compound #1 N-(2-methylbenzyl)-2-[1,6]naphthyridine- carboxamide
To a stirring mixture of 2-[1,6]naphthyridinecarboxylic acid (50 mg, 0.287 mmol), in anhy. THF (5 ml) at 0°C was added triethylamine (44 ml, 0.316 mmol). After 5 min, isopropylchloroformate (0.316 ml, 1M solution in toluene, 0.316 mmol) was added. The mixture was stirred at 0°C for 20 min. then 2-methylbenzylamine (53.46 ml, 0.43 mmol) was added to the mixture at 0°C . The resulting mixture was allowed to warm to room temperature and stirred at room temperature for 5h then diluted in CH2Cl2
(100 ml). The organic layer was washed with water, dried over anhy. MgSO4, and concentrated to give the crude mixture. Chromatography of the crude (Hex: EtOAc = 1:1 to pure EtOAc) afforded desired product as white solid ( 29.8 mg, 37%): m.p. 120-121°C. compound #2 N-benzyl-2-[1,6]naphthyridinecarboxamideTo a stirring mixture of 2-[1,6]naphthyridinecarboxylic acid (50 mg, 0.287 mmol), 1-hydroxybenzo-triazole hydrate (42.7 mg, 0.316 mmol), benzylamine (45 mg, 0.42 mmol) in anhy. THF (5 ml) at 0°C was added 1-(3- dimethylaminopropyl)-3-ethylcarbodiimide hydrochloride (60.6 mg, 0.316 mmol). The resulting mixture was allowed to stir at RT. After 20 min, DMF (2ml) was added to the reaction mixture and the mixture was allowed to stir at room temperature overnight and it was found to be clear. The solvent was removed under vacuum and the resulting residue was redissolved in CH2Cl2 (100 ml). The organic layer was washed with aq. NaHCO3, dried over anhy. MgSO4, and concentrated to give the crude mixture.
Chromatography of the crude (Hex: EtOAc = 1:1 to pure
EtOAc) afforded desired product as white solid (97 mg, 99 %) : m.p. 113-115°C. compound #3 N-(2-bromobenzyl)-2-[1,6]naphthyridinecarboxamide
To a stirring solution of 4-bromobenzylamine
hydrochloride (97.8 mg, 98%, 0.431 mmol) in anhy. DMF (5 ml) was added triethylamine (60.1 ul. 0.431 mmol), After 5 min, 2-[1,6]naphthyridinecarboxylic acid (50 mg, 0.287 mmol), 1-hydroxybenzotriazole hydrate (42.7 mg, 0.316 mmol) and 1-(3-dimethylamino-propyl)-3-ethylcarbodiimide hydrochloride (60.6 mg, 0.316 mmol) was sequentially added. The resulting mixture was allowed to stir at room temperature for overnight and it was found to be clear. The solvent was removed under vacuum and the resulting residue was redissolved in CH2Cl2 (100 ml). The resulting mixture was allowed to stir at room temperature overnight and it was found to be clear. The solvent was removed under vacuum and the resulting residue was redissolved in CH2Cl2 (100 ml). The organic layer was washed with aq. NaHCO3, dried over anhy. MgSO4, and concentrated to give the crude mixture. Chromatography of the crude (Hex: EtOAc = 1:1 to pure EtOAc) afforded desired product as white solid (97 mg, 99 %) : m.p. 149-150°C. compound #4 N-(2-chlorobenzyl)-2-[1,6]naphthyridinecarboxamide
To a stirring mixture of 2-[1,6]naphthyridinecarboxylic acid (50 mg, 0.287 mmol) in anhy. DMF (5 ml) at room temperature was sequentially added 1-hydroxybenzotriazole hydrate (42.7 mg, 0.316 mmol), 2-chlorobenzylamine ( 54.7 μl, 95%, 0.43 mmol) and 1-(3-dimethylaminopropyl)-3- ethylcarbodiimide hydrochloride (60.6 mg, 0.316 mmol). The resulting mixture was allowed to stir at room
temperature overnight and it was found to be clear. The solvent was removed under vacuum and the resulting residue was redissolved in CH2Cl2 (100 ml). The resulting mixture was allowed to stir at room temperature overnight and it was found to be clear. The solvent was removed under vacuum and the resulting residue was redissolved in CH2Cl2 (100 ml). The organic layer was washed with aq. NaHCO3, dried over anhy. MgSO4, and concentrated to give the crude mixture. Chromatography of the crude (Hex:EtOAc - 1:1 to pure EtOAc) afforded desired product as white solid (83 mg, 97 %): m.p. 120-121°C.
compound #5 N-(2-bromobenzyl)-2-[1,6]naphthyridinecarboxamide
To a stirring solution of 2-bromobenzylamine
hydrochloride (80.7 mg, 95%, 0.345 mmol) in anhy. DMF (5 ml) was added triethylamine (51.8 ul. 0.345 mmol), After 5 min, 2-[1,6]naphthyridinecarboxylic acid (40 mg, 0.229 mmol), 1-hydroxybenzotriazole hydrate (34.2 mg, 0.253 mmol) and 1-(3-dimethylamino-propyl)-3-ethylcarbodiimide hydrochloride (48.5 mg, 0.253 mmol) was sequentially added. The resulting mixture was allowed to stir at room temperature for 4 h and it was found to be clear. The solvent was removed under vacuum and the resulting residue was redissolved in CH2Cl2 (100 ml). The organic layer was washed with aq. NaHCO3 , dried over anhy. MgSO4, and concentrated to give the crude mixture. Chromatography of the crude (Hex:EtOAc = 1:1 to pure EtOAc) afforded
desired product as white solid (70 mg, 89 %) : m.p. 129- 130°C. compound #6 N-(3-bromobenzy1)-2-[1,6]naphthyridine- carboxamide
To a stirring solution of 3-bromobenzylamine
hydrochloride (77.5 mg, 0.345 mmol) in anhy. DMF (5 ml) was added triethylamine (51.8 ul. 0.345 mmol), After 5 min, 2-[1,6]naphthyridinecarboxylic acid (40 mg, 0.229 mmol), 1-hydroxybenzotriazole hydrate (34.2 mg, 0.253 mmol) and 1-(3-dimethylamino-propyl)-3-ethylcarbodiimide hydrochloride (48.5 mg, 0.253 mmol) was sequentially added. The resulting mixture was allowed to stir at room temperature overnight and it was found to be clear. The solvent was removed under vacuum and the resulting residue was redissolved in CH2Cl2 (100 ml). The organic layer was washed with aq. NaHCO3, dried over anhy. MgSO4, and concentrated to give the crude mixture. Chromatography of the crude (Hex:EtOAc = 1:1 to pure EtOAc) afforded desired product as white solid ( 64 mg, 81 %) : m.p. 112- 113°C. compound #7 N-(2-fluorobenzyl)-2-[1,6]naphthyridinecarboxamide
To a stirring mixture of 2-[1,6]naphthyridinecarboxylic acid (50 mg, 0.287 mmol) in anhydrous DMF (6.3 mL) at room temperature was added sequentially 1-hydroxybenzotriazole hydrate (42.7 mg, 0.316 mmol), 2-fluorobenzyl amine (51.0 μL, 0.431 mmol) and 1-(3-dimethylaminopropyl)-3- ethylcarboiimide hydrochloride (61.8 mg, 0.316 mmol). The resulting mixture was allowed to stir at room temperature overnight and it was found to be clear. The solvent was removed under vacuum and the resulting residue was redissolved in CH2Cl2 (50 mL). The organic layer was washed with aq. NaHCO3, dried over anhydrous Na2SO4, and
concentrated to give the crude mixture. Flash column chromatography of the crude (50 % hexane / ethyl acetate to 100 % ethyl acetate) afforded the desired product as a white solid (79.2 mg, 98 %) : m.p. 110 - 111 °C. compound #8 N-(4-chlorobenzyl)-2-[1,6]naphthyridine- carboxamide
To a stirring mixture of 2-[1,6]naphthyridinecarboxylic acid (50 mg, 0.287 mmol) in anhydrous DMF (6.3 mL) at room temperature was added sequentially -hydroxybenzotriazole hydrate (42.7 mg, 0.316 mmol), 4-chlorobenzyl amine (53.5 μL, 0.431 mmol) and 1-(3-dimethylaminopropyl)-3- ethylcarboiimide hydrochloride (61.8 mg, 0.316 mmol). The resulting mixture was allowed to stir at room temperature overnight and it was found to be clear. The solvent was removed under vacuum and the resulting residue was re- dissolved in CH2Cl2 (50 mL). The organic layer was washed with aq. NaHCO3, dried over anhydrous Na2SO4, and
concentrated to give the crude mixture. Flash column chromatography of the crude (50 % hexane / ethyl acetate to 100 % ethyl acetate) afforded the desired product as a white solid (80.3 mg, 94 %) : m.p. 110 - 111 °C. compound #9 N-(2-ethoxybenzyl)-2-[1,6]naphthyridinecarboxamide
To a stirring mixture of 2-[1,6]naphthyridinecarboxylic acid (50 mg, 0.287 mmol) in anhydrous DMF (6.3 mL) at room temperature was added sequentially 1-hydroxybenzotriazole hydrate (42.7 mg, 0.316 mmol), 2-ethoxybenzyl amine (64.9 μL, 0.431 mmol) and 1-(3-dimethylaminopropyl)-3- ethylcarboiimide hydrochloride (61.8 mg, 0.316 mmol). The resulting mixture was allowed to stir at room temperature overnight and it was found to be clear. The solvent was removed under vacuum and the resulting residue was redissolved in CH2Cl2 (50 mL). The organic layer was washed with aq. NaHCO3, dried over anhydrous Na2SO4, and
concentrated to give the crude mixture. Flash column
chromatography of the crude (50 % hexane / ethyl acetate to 100 % ethyl acetate) afforded the desired product as a white solid (85.0 mg, 96 %): m.p. 79 - 80 °C. compound #10 [1,6]naphthyridine-2-carboxylic acid indan-
1-ylamide
To a stirring mixture of 2-[1,6]naphthyridinecarboxylic acid (50 mg, 0.287 mmol) in anhydrous DMF (6.3 mL) at room temperature was added sequentially 1-hydroxybenzotriazole hydrate (42.7 mg, 0.316 mmol), 1-aminoindan (56.0 μL,
0.431 mmol) and 1-(3-dimethylaminopropyl)-3- ethylcarboiimide hydrochloride (61.8 mg, 0.316 mmol). The resulting mixture was allowed to stir at room temperature overnight and it was found to be clear. The solvent was removed under vacuum and the resulting residue was redissolved in CH2Cl2 (50 mL). The organic layer was washed with aq. NaHCO3, dried over anhydrous Na2SO4, and
concentrated to give the crude mixture. Flash column
chromatography of the crude (50 % hexane / ethyl acetate to 100 % ethyl acetate) afforded the desired product as a white solid (80.1 mg, 96 %) : m.p. 156 - 157 °C.
compound #11 [1,6]naphthyridine-2-carboxylic acid (1,2,3,4- tetrahydro-naphthalen-1-yl)-amide
To a stirring mixture of 2-[1,6]naphthyridinecarboxylic acid (50 mg, 0.287 mmol) in anhydrous DMF (6.3 mL) at room temperature was added sequentially 1-hydroxybenzotriazole hydrate (42.7 mg, 0.316 mmol), 1,2,3,4-tetrahydro-1- naphthylamine (63.0 μL, 0.431 mmol) and 1-(3- dimethylaminopropyl)-3-ethylcarboiimide hydrochloride
(61.8 mg, 0.316 mmol). The resulting mixture was allowed to stir at room temperature overnight and it was found to be clear. The solvent was removed under vacuum and the resulting residue was re-dissolved in CH2Cl2 (50 mL). The organic layer was washed with aq. NaHCO3, dried over anhydrous Na2SO4, and concentrated to give the crude mixture. Flash column chromatography of the crude (50 % hexane / ethyl acetate to 100 % ethyl acetate) afforded the desired product as a white solid (87.0 mg, 100 %) : m.p. 164 - 165 °C. compound #12 N-(3-methoxybenzyl)-2-[1,6]naphthyridinecarboxamide
To a stirring mixture of 2-[1,6]naphthyridinecarboxylic acid (50 mg, 0.287 mmol) in anhydrous DMF (1.0 mL) at room temperature was added sequentially 1-hydroxybenzotriazole hydrate (42.7 mg, 0.316 mmol), 3-methoxybenzylamine (56.6 μL, 0.431 mmol) and 1-(3-dimethylaminopropyl)-3- ethylcarboiimide hydrochloride (61.8 mg, 0.316 mmol). The resulting mixture was allowed to stir at room temperature overnight and it was found to be clear. The solvent was removed under vacuum. Flash column chromatography of the residue (50 % hexane / ethyl acetate to 100 % ethyl acetate) afforded the desired product as a clear oil (79.1 mg, 94 %). compound #13 N-(2-trifluoromethylbenzyl)-2-
[1,6]naphthyridinecarboxamide
To a stirring mixture of 2-[1,6]naphthyridinecarboxylic acid (50 mg, 0.287 mmol) in anhydrous DMF (1.0 mL) at room temperature was added sequentially 1-hydroxybenzotriazole hydrate (42.7 mg, 0.316 mmol), 2-(trifluoromethyl)- benzylamine (61.6 μL, 0.431 mmol) and 1-(3- dimethylaminopropyl)-3-ethylcarboiimide hydrochloride (61.8 mg, 0.316 mmol). The resulting mixture was allowed to stir at room temperature overnight and it was found to be clear. The solvent was removed under vacuum. Flash column chromatography of the residue (50 % hexane / ethyl acetate to 100 % ethyl acetate) afforded the desired product as a white solid (90.9 mg, 96 %) : m.p. 125 - 127 °C. compound #14 N-(2, 6-dimethoxybenzy1)-2-[1,6]naphthyridinecarboxamide
To a stirring mixture of 2-[1,6]naphthyridinecarboxylic acid (50 mg, 0.287 mmol) in anhydrous DMF (1.0 mL) at room temperature was added sequentially 1-hydroxybenzotriazole hydrate (42.7 mg, 0.316 mmol), 2, 6-dimethoxybenzylamine (75.0 mg, 0.431 mmol) and 1-(3-dimethylaminopropyl)-3- ethylcarboiimide hydrochloride (61.8 mg, 0.316 ramol). The resulting mixture was allowed to stir at room temperature overnight and it was found to be clear. The solvent was removed under vacuum. Flash column chromatography of the residue (50 % hexane / ethyl acetate to 100 % ethyl
acetate) afforded the desired product as a white solid
(90.6 mg, 98 %) : m.p. 169 - 171 °C. compound #15 [1,6]naphthyridine-2-carboxylic acid
(trans-2-phenyl-cyclopropyl)-amide To a stirring mixture of trans-2-phenylcyclopropylamine hydrochloride (75.3 mg, 0.431) in anhydrous DMF (1.0 mL) was added triethylamine (60.0 μL, 0.431 mmol). After 5 minutes, 2-[1,6]naphthyridinecarboxylic acid (50 mg, 0.287 mmol), 1-hydroxybenzotriazole hydrate (42.7 mg, 0.316 mmol), and 1-(3-dimethylaminopropyl)-3-ethylcarboiimide hydrochloride (61.8 mg, 0.316 mmol) were added
sequentially. The resulting mixture was allowed to stir at room temperature overnight and it was found to be
clear. The solvent was removed under vacuum. Flash
column chromatography of the residue (50 % hexane / ethyl acetate to 100 % ethyl acetate) afforded the desired
product as a white solid (79.2 mg, 95 %) : m.p. 123 - 124 °C. compound #16 N-(2-amino-6-fluorobenzyl)-2- [1,6]naphthyridinecarboxamide
To a stirring mixture of 2-[1,6]naphthyridinecarboxylic acid (50 mg, 0.287 mmol) in anhydrous DMF (1.0 mL) at room temperature was added sequentially 1-hydroxybenzotriazole hydrate (42.7 mg, 0.316 mmol), 2-amino-6-fluorobenzylamine (60.0 μL) and 1-(3-dimethylaminopropyl)-3-ethylcarboiimide hydrochloride (61.8 mg, 0.316 mmol). The resulting mixture was allowed to stir at room temperature overnight and it was found to be clear. The solvent was removed under vacuum. Flash column chromatography of the residue (50 % hexane / ethyl acetate to 100 % ethyl acetate) afforded the desired product as a white solid (80.0 mg, 94 %) : m.p. 165 (dec.). compound #17 [1,6]naphthyridine-2-carboxylic acid (1- phenylethyl) amide
To a stirring mixture of 2-[1,6]naphthyridinecarboxylic acid (50 mg, 0.287 mmol) in anhydrous DMF (1.0 mL) at room temperature was added sequentially 1-hydroxybenzotriazole hydrate (42.7 mg, 0.316 mmol), 1-phenylethylamine (56.1 μL, 0.431 mmol) and 1-(3-dimethylaminopropyl)-3- ethylcarboiimide hydrochloride (61.8 mg, 0.316 mmol). The resulting mixture was allowed to stir at room temperature overnight and it was found to be clear. The solvent was removed under vacuum. Flash column chromatography of the residue (50 % hexane / ethyl acetate to 100 % ethyl acetate) afforded the desired product as a clear oil (78.7 mg, 99 %) . compound #18 [1,6]naphthyridine-2-carboxylic acid
(pyridine-2-ylmethyl) amide
To a stirring mixture of 2-[1,6]naphthyridinecarboxylic acid (50 mg, 0.287 mmol) in anhydrous DMF (1.0 mL) at room temperature was added sequentially 1-hydroxybenzotriazole hydrate (42.7 mg, 0.316 mmol), 2-(aminomethyl) pyridine (45.3 μL, 0.431 mmol) and 1-(3-dimethylaminopropyl)-3- ethylcarboiimide hydrochloride (61.8 mg, 0.316 mmol). The resulting mixture was allowed to stir at room temperature overnight and it was found to be clear. The solvent was removed under vacuum. Flash column chromatography of the residue (50 % hexane / ethyl acetate to 5 % methanol / ethyl acetate) afforded the desired product as a light brown solid (78.7 mg, 99 %) : m.p. 123 -125 °C. compound #19 [1,6]naphthyridine-2-carboxylic acid
cyclohexyl-methylamide
To a stirring mixture of 2-[1,6]naphthyridinecarboxylic acid (50 mg, 0.287 mmol) in anhydrous DMF (1.0 mL) at room temperature was added sequentially 1-hydroxybenzotriazole hydrate (42.7 mg, 0.316 mmol), cyclohexanemethylamine (57.2 μL, 0.431 mmol) and 1-(3-dimethylaminopropyl)-3- ethylcarboiimide hydrochloride (61.8 mg, 0.316 mmol). The resulting mixture was allowed to stir at room temperature overnight and it was found to be clear. The solvent was removed under vacuum. Flash column chromatography of the residue (100 % ethyl acetate) afforded the desired product as a white solid (74.9 mg, 97 %) : m.p. 62 -63 °C. compound #20 (3,4-dihydro-lh-isoquinolin-2-yl)- [1,6]naphthyridin-2-yl-methanone To a stirring mixture of 2-[1,6]naphthyridinecarboxylic acid (50 mg, 0.287 mmol) in anhydrous DMF (1.0 mL) at room temperature was added sequentially 1-hydroxybenzotriazole hydrate (42.7 mg, 0.316 mmol), 1,2,3,4- tetrahydroisoquinoline (55.6 μL, 0.431 mmol) and 1-(3- dimethylaminopropyl)-3-ethylcarboiimide hydrochloride
(61.8 mg, 0.316 mmol). The resulting mixture was allowed to stir at room temperature overnight and it was found to be clear. The solvent was removed under vacuum. Flash column chromatography of the residue (100 % ethyl acetate) afforded the desired product as a white solid (79.1 mg, 95 %) : m.p. 98 - 100 °C. compound #21 N-(2-methylthiobenzyl)-2-[1,6]naphthyridine carboxamide
To a stirring mixture of 2-methylsulfanylbenzylamine hydrochloride (81.7 mg, 0.431) in anhydrous DMF (1.0 mL) was added triethylamine (60.0 μL, 0.431 mmol). After 5 minutes, 2-[1,6]naphthyridinecarboxylic acid (50 mg, 0.287 mmol), 1-hydroxybenzotriazole hydrate (42.7 mg, 0.316 mmol), and 1-(3-dimethylaminopropyl)-3-ethylcarboiimide hydrochloride (61.8 mg, 0.316 mmol) were added
sequentially. The resulting mixture was allowed to stir at room temperature overnight. The solvent was removed under vacuum. Flash column chromatography of the residue (50 % hexane / ethyl acetate to 100 % ethyl acetate) afforded the desired product as a light brown solid (88.2 mg, 99 %) : m.p. 102 - 103 °C. compound #32
7, 8-dihydroisoquinolin-6-carboxylic acid 2'- methoxybenzylamide step 1
Figure imgf000040_0001
Chromium trioxide (15.50, 173. lo mmol) was added in one protion to a solution of pyridine (28 mL, 346.20 mmol) in dichloromethane (175 mL) at 0°C. The cooling bath was removed and the mixture was allowed to stir for 30 min. To that solution was then added a solution of the
alcohol (Cheng, C.Y.;Hsin, L.W.;Liou, J.P. Tetrahedron, 1996, 52, 10935). (3.851 g, 25.85 mmol) in dichloromethane (15 mL). The mixture was then stirred at room temperature for 2 h and the solution was decanted, the solvent was then removed and the residue was purified by
chromatography eluting with 2% MeOH in CH2Cl2 . The desired compound was obtained as a pale yellow solid (2.662 g, 70%) 1H NMR (400 MHz,CDCl3) δ: 8.69 (s, 1 H, H-1) , 8.64 (d, 1 H, H-2, J = 7.1 Hz) , 7.78 (d, 1 H, H-4, J = 7.1 Hz) , 2.99 (t, 2 H, H-6, J = 6.2 Hz) , 2.73 (t, 2 H, H-8, J = 6.3 Hz) , 2.21 (t, 2 H, H-7, J = 6.2 Hz) .
Figure imgf000041_0001
LiHMDS in THF (1 M, 11.0 mL, 1 mmol) was added to a solution name (Lithrium 1,1,1,3,3,3-hexamethyldisilazane) of ketone (115 mg, 0.78 mmol) in THF (3 mL) at -78°C.
After 15 min at this temperature methyl cyanoformate (0.3 mL, 3.9 mmol) was added and the mixture was allowed stir overnight. The reaction was then quenched with saturated ammonium chloride and extracted with ethyl acetate. After drying (Na2SO4). The residue was triturated with cold ethyl acetate yielding the desired compound. (75 mg, 47%) 1H NMR (400 MHz,CDCl3) δ: 11.81 (s, 1 H, OH), 8.63 (d, 1 H, H-3, J = 5.9 Hz), ), 8.58 (s, 1 H, H-1), 8.16 (d, 1 H, H- 4, J = 5.9 Hz), 3.93 (s, 3 H, OCH3), 3.05 (t, 2 H, H-8, J = 7.8 Hz), 2.74 (t, 2 H, H-7, J = 8.5 Hz)
Figure imgf000041_0002
A solution of the enol from step 2 (350 mg, 1.71 mmol) in methanol (10 mL) was stirred in the presence of palladium on carbon (10%, 350 mg) under an atmosphere of hydrogen for 1 h. The catalyst was then removed by filtration through celite and the filtrate was concentrated to dryness to give the desired compound as a white solid.
(350 mg, 100%)
1H NMR (400 MHz,DMSO) δ: 8.72 (s, 1 H, H-1), 8.67 (d, 1 H, H-3, J = 5.8 Hz), ), 7.90 (d, 1 H, H-4, J = 5.8 Hz), 6.6 (br, 1 H, OH), 5.02 (d, 1 H, H-5, J = 4.3 Hz), 3.63 (s, 3 H, OCH3), 3.0 (m, 2 H), 2.8 (m, 1 H), 2.0 (m, 1 H), 1.9 (m, 1 H).
Figure imgf000042_0001
Methanesulfonyl chloride (0.18 ML, 2.37 mmol) was added to a solution of alcohol from step 3 (350 mg, 1.69 mmol) and triethylamine (0.35 mL, 2.54 mmol) in dichloromethane (10 mL) at 0°C. The mixture was then stirred at room
temperature for 2 h and the solution was then washed with water, NaHCO3 and dried using Na2SO4. The solvent was then removed and the residue was taken into dichloroethane (5 mL) and treated with DBU (1,8-diazabicyclo[5.4.0]undec-7- mle) (0.5 mL). The solution was stirred for 2 h at room temperature and the solvent was removed under vacuo and the residue was purified by chromatography (1% MeOH in CH2Cl2) to give the desired compound (159mg, 50% from alcohol) 1H NMR (300 MHz,CDCl3) δ: 8.46 (d, 1 H, H-3, J = 4.4 Hz), 8.44 (S, 1 H, H-1), 7.44(s, 1 H, H-5), 7.06 (d, 1 H, H-4, J = 4.4 Hz), 3.83 (s, 3 H, OCH3), 2.87 (t, 2 H, H-8, J = 8.0 Hz), 2.69 (t, 2 H, H-7, J = 8.0 Hz).
Figure imgf000043_0001
NaOH (1 N, 1.3 mL, 1.3 mmol) was added to a solution of ester from step 4 (159 mg, 0.84 mmol) in dioxane (3 mL) at rt. After3 h, the mixture was concentrated to about 1 mL and HCl (6N) was carefully added to the ice cold solution until pH5 was reached. The resulting precipitate was collected, washed with water and dried under vacuo. (92 mg, 62%)
1H NMR (400 MHz,DMSO) δ: 8.42 (m, 2 H, H-l and H-3), 7.45 (s, 1 H, H-5), 7.31 (d, 1 H, H-4, J = 4.9 Hz), 2.82 (t, 2 H, H-8, J = 8.2 Hz), 2.53 (t, 2 H, H-7, J = 7.5 Hz).
Figure imgf000043_0002
A solution of the acid from step 5 (60 mg, 0.34 mmol), 1- (3-dimethylaminopropyl)-3-ethylcarbodiimide hydrochloride (79 mg, 0.41 mmol), and HOBT (1-hydroxybenzotriazole hydrate) (55 mg, 0.41 mmol) 2-methoxybenzylamine (54 μL, 0.41 mmol) in DMF (1 mL) was stirred at room temperature for 24 h. The solvent was then removed under vacuo and the residue was purified by chromatography eluting with 50-100 EtAC in Hexanes. The desired compound was obtained as a white solid. (80 mg, 79%)
1H NMR (300 MHz, CDCl3) δ: 8.45 (d, 1 H, J = 4.8 Hz), 8.41 (s, 1 H, H-1), 7.31 (m, 2 H), 7.10 (s, 1 H, H-5), 7.03 (d, 1 H, H-4, J = 4.8 Hz)6.94 (br, 1 H, NH) , 4.59 (d, 2 H, CH2, J = 5.8 Hz), 3.91 (s, 3 H, OCH3), 2.88 (t, 2 H, H-8, J = 8.0 Hz), 2.64 (t, 2 H, H-7, J = 8.3 Hz). compound #33 8-bromo-[1,6]Naphthyridine-2-carboxylic
acid 2-N-ethylaminobenzylamine step 1
N-ethyl-2-aminobenzonitrile
Figure imgf000044_0001
A solution of lithium bis (trimethylsylil) amide (7.6 mL, IM in tetrahydrofurane) is added to a cold (0°C) solution of 2-aminobenzonitrile (1 g, 8.5 mmol) in tetrahydrofuran
(10 mL) and DMF (2 mL). The resulting solution is stirred for 30 minutes, iodoethane (0.68 mL, 8.5 mmol) was then added dropwise. The solution is allowed to reach room temperature and stirred over night. The reaction mixture was then quenched with saturated NH4Cl evaporated, diluted with CH2CI2, washed with water, brine and the combined organic extracts were dried with Na2SO4 and concentrated. The resulting liquide was chromatographed onto silica gel (30% EtOAc-Hex), giving the title compound in a 9 to 1 ratio of mono and bis alkylated compounds non separable.
N-ethyl-2-ammobenzonιtrιle:
1H NMR (400MHz) (CDCI3) δ: 7.41-7.33 (m, 2H, Ph), 6.68- 6.65 (m, 2H, Ph), 4.5 (s, 1H, NH), 3.29-3.22 (m, 2H, CH- 2N), 1.32 (t, J=7 Hz, 3H, CH3CH2)
N-dιethyl-2-ammobenzonιtrile:
1H NMR (400mhz) ( CDCl3) δ: 7.41-7.33 (m, 2H, Ph), 6.68-
6.65 (m, 2H, Ph), 4.5 (s, 1H, NH), 3.41 (q, 4H, CH2N),
1.20 (t, J=7 Hz, 6H, CH3CH2)
step 2
N-ethyl-2-aminobenzylamιne dihydrochloride and N-diethyl- 2-amιnobenzamιne dihydrochloride
Figure imgf000046_0001
N-ethyl-2-ammobenzonιtnle (0.4g, 2.7 mmol), 10% Pd/C (100 mg) is added in a dry flask followed by ethanol (15 mL). To this solution HCl was added (2.7 mL, 4M in
dioxane). The resulting reaction was placed under an H2(g) atmosphere. The resulting solution was filtered over celite, was evaporated, triturated with ether, and the solvent was evaporated to yield the above intermediate. N-ethyl-2-amιnobenzylamme dihydrochloride:
1H NMR (400MHz) (DMSO) δ: 8.5-8.2 (m, 3H, NH3), 7.35-7.25
(1, 2H, Ph), 7.34(t, J=7.5 Hz, 1H, Ph)
7.1-6.9 (m, 2H, Ph), 4.07 (s, 2H, CH2N) , 3.19 (q, 2H, J=7 Hz, CH3CH2), 1.27 (t, J=7 Hz, 3H, CH3CH2)
N-dιethyl-2-ammobenzamιne dihydrochloride :
1H NMR (400MHz) (DMSO) δ: 8.5-8.2 (m, 3H, NH3) , 7.35-7.25 (1, 2H, Ph), 7.34(t, J=7.5 Hz, 1H, Ph)
7.1-6.9 (m, 2H, Ph) , 4.07 (s, 2H, CH2N), 3.33 (q, 2H,
J=7 Hz, CH3CH2), 1.07 (t, J=7 Hz, 3H, CH3CH2) step 3
8-bromo-[1,6]Naphthyrιdme-2-carboxylιc acid
Figure imgf000047_0001
is added Br2 over 40 minutes to a suspension of the
[1,6]Naphthyrιdme-2-carboxylιc acid (3 g, 17.25 mmol) in acetic acid (150 mL) at room temperature (18.96 mmol). The solution was stirred over night at room temperature then the mixture was quenched with ice and stirred for 1 hour. The suspension was evaporated to dryness then triturated, filtrated and washed with a minimum of cold water. The resulting composition was dried under vacuum over night to yield the title compound in a 59 % yield .
1H NMR (400MHz) (DMSO) δ: 14.1-13.8 (M, 1H, COOH), 9.49 (s, 1H, H5), 9.10 (s, 1H, H7), 8.83 (d, 1H, J=8.5 Hz, H4), 8.31 (d, 1H, J=8.5 Hz, H3) step 4 8-bromo-[1,6]Naphthyridine-2-carboxylic acid 2-N- ethylamino-benzylamine
Figure imgf000048_0001
Triethylamine (0.095 mL, 0.68 mmol) was added to a solution of the salt (57 mg, 0.255 mmol) in DMF (1.5 mL) at room temperature. The solution was stirred for five minutes. Simultaneously, the acid (30 mg, 0.12 mmol), HOBT (25 mg, 0.19 mmol) and EDCI were added (36 mg, 0.19 mmol) The reaction was left to stir over night at room
temperature. The solution was evaporated to dryness and the residue was dissolved in a minimum of CH2Cl2 and purified using flash chromatography ( 50% AcOEt/Hexane to 100% AcOEt) to yield the title compound in a 61% yield.
1H NMR (400MHz) (CDCl3) δ: 9.27 (s, 1H, H5), 9.05 (s, 1H, H7), 8.65-8.55 (s, 1H, NH), 8.55-8.45 (m, 2H, H4 and H3), 7.3-7.2 (m, 2H, Ph), 7.85-7.65 (m, 2H, Ph), 4.67 (d, 2H, J=6.5 Hz, CH2), 3.25-3.15 (m, 2H, CH2CH3), 1.4-1.3 (m, 3H, CH3CH2)
step 5
8-bromo-[1,6]Naphthyridine-2-carboxylic acid 2-N- ethylaminobenzylamine hydrochloride salt
Figure imgf000049_0001
HCl was added to a solution of the amide (28.4 mg, 0.06 mmol) in CH2C l2 (0.5 mL) at room temperature (1 mL, 4M in dioxane). The solution was stirred for 20 minutes at room temperature. The suspension was evaporated to dryness then triturated in ether to yield the title compound in a quantitative yield.
1H NMR (400MHz) (CDCl3) δ: 9.27 (s, 1H, H5), 9.05 (s, 1H, H7), 8.65-8.55 (s, 1H, NH), 8.55-8.45 (m, 2H, H4 and H3), 7.3-7.2 (m, 2H, Ph), 7.85-7.65 (m, 2H, Ph), 4.67 (d, 2H, J=6.5 Hz, CH2), 3.25-3.15 (m, 2H, CH2CH3), 1.4-1.3 (m, 3H, CH3CH2) compound #39 [1,6]Naphthyridine-2-thiocarboxylic acid-2-trifluoromethylbenzylamine;
Figure imgf000049_0002
Lawesson's reagent was added to a stirring solution of BCH-5024 (30mg, 0.09 mmol) in toluene (1.5 mL) (38 mg, 0.09 mmol). The solution was then heated to 90°C for 1h. The solvent was evaporated and the product was purified by flash chromatography (50% AcOEt/He to 100% AcOEt) to yield 25.8 mg of the thioamide derivative.
1H NMR (400MHz, CDCl3): 10.55 (bs, 1H), 9.3 (s, 1H), 9.0
(d, J= 8.5 Hz, 1H), 8.81 (d, J=6Hz, 1H), 8.44 (d, J=8.5 Hz, 1H), 7.90 (d, J= 6.0 Hz, 1H), 7.75 (d, J=7.5 Hz, 1H), 7.68 (d, J=7.5 Hz, 1H), 7.56 (t, J=7.5Hz, 1H), 7.46 (t, J=7.5Hz, 1H), 5.37 (d, J= 6 Hz, 2H). compound #46 1- ( 2 - iso-propoxy-phenyl) - 3 - [1 , 6] naphthyridin-2 -yl-urea;
Figure imgf000050_0001
A solution of 2-isopropoxyphenylamine (400 mg , 2.64 mmol) and N,N-diisopropylethylamine (1.02 ml, 5.82 mmol) in dichloromethane (10.0 mL) was added dropwise via cannula to a solution of triphosgene (274.7 mg, 0.93 mmol) in dichloromethane (6.0 mL) at -78 °C. The
solution was stirred at -78 °C for 1 hour, then at 0 °C for 1 hour, and then at room temperature for 1 hour. The mixture was concentrated, triturated with pentane, and then filtered. The desired isocyanate was isolated as a brown oil (449.7 mg, 96 %) : 1H NMR (400 MHz, CDCl3) δ 7.12 (1H, Ph), 6.99 (1H, Ph), 6.90 (1H, Ph), 6.86 (1H, Ph), 4.65 (septet, 1H, CH, J 6.5 Hz), 1.42 (d, 6H, CH3, J 6.5 Hz) ppm.
A mixture of the isocyanate (45.8 mg, 0.258) and the amine (25 mg, 0.172) in acetonitrile (1 mL) was heated at reflux for 3 hours. The solvent was removed using a roto-evaporator. The residue was then triturated with diethyl ether, filtered, and washed with diethyl ether. The solid was washed again with ethanol and then diethyl ether repeatedly. The desired product was isolated as a light brown solid (34.4 mg, 62 %) : m.p. > 200 °C; 1H NMR (400 MHz, DMSO) δ 11.33 (bs, 1H, NH), 10.56 (bs, 1H,
NH), 9.17 (s, 1H, H-5), 8.68 (d, 1H, H-7, J 5.8 Hz), 8.43 (d, 1H, H-4, J 8.9 Hz), 8.16 (1H, Ph), 7.68 (d, 1H, H-8, J 5.8 Hz), 7.50 (d, 1H, H-3, J 8.9 Hz), 7.12 (1H, Ph), 7.03 (1H, Ph), 6.93 (1H, Ph), 4.70 (septet, 1H, CH, J 6.0 Hz), 1.34 (d, 6H, CH3, J 6.0 Hz) ppm.
In a like manner, the following compounds were prepared:
Compound #22 N-(2-hydroxybenzyl)-2-(1,6)naphthyridinecarboxamide; compound #23 N-(2-methoxycarbonylbenzyl)-2-(1,6)- naphthyridinecarboxamide; compound #26 N-(2propoxybenzyl)-2-[1,6]naphthyridine-2- carboxamide; compound #27 (2-{[([1,6]naphthyridine-2-carbonyl)-amino]- methyl}-phenyl)-carbonic acid tert-butyl ester; compound #28 [1,6]Naphthyridine-2-carboxylic acid
(2,3,4,5-tetrahydrobenzo[B]oxepin-5-yl)- amide ; compound #29 [1,6]Naphthyridine-2-carboxylic acid
(chroman-4-yl)-amide ; compound #30 N-(2'-methoxybenzyl)-5-amino-2- [1,6]naphthyridinecarboxamide; compound #31 [1,6]Naphthyridine-2-carboxylic acid 2,3- (methylenedioxy)-benzylamide ; compound #33 8-bromo-[1,6]naphthyridine-2-carboxylic acid
(2-N-ethylaminobenzylamine); compound #34 8-bromo-[1,6]naphthyridine-2-carboxylic acid
(2-isopropoxybenzylamine); compound #35 8-bromo-[1,6]naphthyridine-2-carboxylic acid
(2-methoxybenzylamine); compound #36 8-chloro-[1,6]naphthyridine-2-carboxylic acid (2-isopropoxybenzylamine); compound #37 8-chloro-[1,6]naphthyridine-2-carboxylic acid
(2-N-ethylaminobenzylamine); compound #38 8-(2pyridyl)-[1,6]naphthyridine-2-carboxylic acid (2--isopropoxybenzylamine); compound #40 [1,6]Naphthyridine-2-thiocarboxylic
isopropoxybenzylamine; compound #41 [1,6]Naphthyridine-2-thiocarboxylic acid-3- methoxybenzylamine; compound #42 8-bromo-[1,6]Naphthyridine-2-thiocarboxylic acid-2-isopropoxybenzylamine;
compound #43 [1,6]Naphthyridine-2-thiocarboxylic acid 2- methoxy-benzylamide ; compound #44 [1,6]Naphthyridine-2-thiocarboxylic acid 2- ethoxy-benzylamide ; compound #45 [1,6]Naphthyridine-2-thiocarboxylic acid-2- methoxy-cyclohexylmethyl-amide;
compound #47 1-(2-iso-propoxybenzyl)-3-[1,6]naphthyridin- 2-yl-urea; compound #48 1-(N-boc-4-aminobutyl)-3-[1,6]naphthyridin-2- yl-urea; compound #49 1-(4-aminobutyl)-3-[1,6]naphthyridin-2-yl- urea hydrochloride; compound #50 1-[(s)-α-methylbenzyl]-3-[1,6]naphthyridin-2- yl-urea; coπφound #51 1-[(R)-α-methylbenzyl]-3-[1,6]naphthyridin-2- yl-urea; compound #52 1-(2-methoxy-phenyl)-3-[1,6]naphthyridin-2- yl-urea; compound #53 1-butyl-3-[1,6]naphthyridin-2-yl-urea; compound #54 1-(2-methoxybenzyl)-3-[1,6]naphthyridin-2-yl- urea; compound #55 1-(2-ethoxy-phenyl)-3-[1,6]naphthyridin-2-yl- urea;
Compound #56 1-(2-methyl-phenyl)-3-[1,6]naphthyridin-2-yl- urea; and
Compound #57 8-(2-pyridyl)-[1,6]naphthyridine-2-carboxylie acid (2-isopropoxybenzylamine).
The following compounds were obtained commercially
(Peakdale Fine Chemicals Limited, Glossop Derbyshire, UK) : compound #24 (1,6)naphthyridine-2-carboxylie acid
allylamide (PFC-029);
compound #25 N-(2-methoxybenzyl)-2-(1,6)naphthyridinecarboxamide (PFC-032). EXAMPLE 2 CMV Plaque Reduction Assay
The anti-CMV activity of test compounds was evaluated in a laque reduction assay as follows: In 12-well tissue culture dishes, 1.5X10E5 or Hs68 cells (human lung fibroblaεt cell line) were plated per well with 2 ml of DMEM 10% fetal bovine serum and incubated in 5% CO2/air at 37°C overnight or until cells were ready. The medium was then removed and the cells inoculated with 0.5 ml (containing 200 pfu/ml diluted in DMEM 2% FBS) of HCMV virus in each well.
After adsorption at 37°C for 2 hours, the virus was removed and cell monolayers were overlaid (1ml) with DMEM 2% FBS containing test compounds at various
concentrations. The cells were then incubated at 37°C for 8 days, and then fixed with one volume (1ml) of
formaldehyde 8%/water or PBS 1X for 30 minutes.
The formaldehyde solution was removed and the cell
monolayers were stained with crystal violet 2%/EtOH 20% for a few seconds and then rinsed with water.
Monolayers were examined for the presence of plaques under a microscope, the percentage of plaque reduction
determined for each compound by comparison with the untreated cells (no test compound) and the 50% inhibitory concentration (IC50) established. Ganciclovir was used as a positive control.
Note: DMEM medium contained 1% glutamine and 1% pen/strep
EXAMPLE 3 Cytotoxicity Assay The cytotoxicity of test compounds was evaluated according to the following procedure:
Flat bottom 96 well plates were plated with 5X10E3 Vero-34 cells/well and 1X10E4 Hs-68 or Wi-38 cells/well
respectively and incubated overnight at 37°C and 5%
CO2/air. After incubation, the supernatant medium was removed and replaced with test compound dilutions in 2% DMEM (150ul). The cells were then incubated 48 hours in a 5% CO2 incubator at 37°C.
50μl/well of 10uCi/ml solution of [3H]-methyl thymidine (specific activity of approx. 2Ci/mmol) was added to the culture medium and incubated overnight (18 hours) in a 5% CO2 incubator at 37°C.
Cells were then collected onto a fiberglass filter
(Printed Filtermat A 1450-421 Wallac) with a Tomtec cell harvester. Suspended cells were collected directly onto filter while for adherent cells, the medium was first removed, then the cells washed with PBS and trypsinized for 2-3 minutes (50μl trypsin/well) before collecting.
Filters were dried for 1 hour at 37-40°C and then placed into bags (1450-microbeta # 1450-432 Wallac) with 4.5ml of Betascint and counts obtained with Microbeta 1450 Wallac (protocol 1).
The percent of cell proliferation was determined by comparison to the control (no test compound) and thereby establishing 50% inhibitory concentration is established. Compounds according to the invention where found to inhibit CMV according to the plaque reduction assay and compared favorably to ganciclovir. Results are summarized in table 1. The compounds were tested in tandem with ganciclovir which consistently showed an
IC50 of >0.1<0.5 μg/ml and a CC50 which varied from ~10 to 200 μg/ml.
Figure imgf000057_0001
Figure imgf000058_0001
Figure imgf000059_0001
Figure imgf000060_0001
Figure imgf000061_0001
Figure imgf000062_0001
Figure imgf000063_0001

Claims

WE CLAIM :
1. A method of inhibiting cytomegalovirus replication in a mammal comprising administering to said mammal an anti-cytomegaloviral amount of a compound of formula (I):
Figure imgf000064_0001
wherein
W is selected from CH, CR3, CH2, C=O, CHR3, N and NR5; one of X, Y, and Z is N or NR5 while the other two are independently selected from CH, CR4, CH2, C=Oand
CHR4;
B is selected from the group consisting of;
Figure imgf000064_0002
wherein;
A is O or S;
R1 is selected from:
C1-6 alkyl, C2-6 alkenyl or C3-7 cycloalkyl optionally substituted with OH, halogen, amino, carboxyl or saturated or unsaturated C3-10 (carbocycle or
heterocycle) optionally substituted with OH, halogen, amino, mercapto, carboxy, C1-4 (alkyl, alkoxy, alkylthio, acyl, acyloxy or alkoxycarbonyl)
optionally substituted with OH, halogen, amino or C1-4 alkoxy,; and
C3-7 cycloalkyl fused to C6-10 aryl optionally
substituted with OH, halogen, amino, mercapto, carboxy, C1-4 (alkyl, alkoxy, alkylthio, acyl, acyloxy or alkoxycarbonyl) optionally substituted with OH, halogen, amino or C1-4 alkoxy; R2 and R'2 are idependently selected from H, or C1 - 4 alkyl or R1 and R2 together form a saturated or unsaturated 5 or 6 member heterocycle optionally fused to C6-10 aryl or heteroaryl;
R3 and R4 are independently selected from H, OH, halogen, amino, cyano, C1-6 (alkyl, alkoxy, acyl, acyloxy or alkoxycarbonyl) optionally substituted with OH, halogen, amino or C1-4 alkoxy, and saturated or unsaturated C3-10 (carbocycle or heterocycle) optionally substituted with OH, halogen, amino, mercapto, C1-4 alkylthio, C1 -4 alkoxycarbonyl, halo- substituted C1-4 alkyl or halo-substituted C1-4 alkoxy, C1-4 alkyl, C1 -4 alkoxy or carboxy;
R5 is H, C1-6 alkyl or C1 - 6 acyl optionally
substituted with OH, halogen, amino or C1-4 alkoxy; and
n is 0, 1 or 2.
2. A method according to claim, wherein W is N or NR5.
3. A method according to claim 1, wherein Y is N or NR5 and X and Y are independently selected from CH, CR4, CH2, C=Oand CHR4.
4. A method according to claim 1, wherein R1 is benzyl optionally substituted with one or two substituents selected from hydroxy, amino, halogen, C1 - 4 alkyl, C1- 4 alkoxy, C1-4 alkoxycarbonyl, C1-4 alkylthio, C1-4 halo-substituted alkyl.
5. A method according to claim 1, wherein R2 and R'2 is H.
6. A method according to any one claim 1 to 4, wherein R3 is H.
7. A method according to any one claims 1 to 4, wherein R4 is H.
8. An anti-cytomegalovirus composition comprising a
pharmaceutically acceptable carrier, diluent or adjunct and a compound of formula (I) or a
pharmaceutically acceptable salt thereof:
Figure imgf000066_0001
wherein
W is selected from CH, CR3, CH2, C=O, CHR3, N and NR5; one of X, Y, and Z is N or NR5 while the other two are independently selected from CH, CR4, CH2, C=Oand
CHR4;
B is selected from the group consisting of;
Figure imgf000066_0002
wherein;
A is O or S;
R1 is selected from:
C1-6 alkyl, C2-6 alkenyl or C3-7 cycloalkyl optionally substituted with OH, halogen, amino, carboxyl or saturated or unsaturated C3-10 (carbocycle or
heterocycle) optionally substituted with OH, halogen, amino, mercapto, carboxy, C1-4 (alkyl, alkoxy, alkylthio, acyl, acyloxy or alkoxycarbonyl)
optionally substituted with OH, halogen, amino or C1-4 alkoxy,; and
C3-7 cycloalkyl fused to C6-10 aryl optionally
substituted with OH, halogen, amino, mercapto, carboxy, C1-4 (alkyl, alkoxy, alkylthio, acyl, acyloxy or alkoxycarbonyl) optionally substituted with OH, halogen, amino or C1-4 alkoxy;
R2 and R'2 are idependently selected from H, or C1-4 alkyl or R1 and R2 together form a saturated or unsaturated 5 or 6 member heterocycle optionally fused to C6-10 aryl or heteroaryl;
R3 and R4 are independently selected from H, OH, halogen, amino, cyano, C1-6 (alkyl, alkoxy, acyl, acyloxy or alkoxycarbonyl) optionally substituted with OH, halogen, amino or C1-4 alkoxy, and saturated or unsaturated C3-10 (carbocycle or heterocycle) optionally substituted with OH, halogen, amino, mercapto, C1-4 alkylthio, C1-4 alkoxycarbonyl, halo- substituted C1-4 alkyl or halo-substituted C1-4 alkoxy, C1 -4 alkyl, C1-4 alkoxy or carboxy;
R5 is H, C1-6 alkyl or C1-6 acyl optionally
substituted with OH, halogen, amino or C1-4 alkoxy; and
n is 0, 1 or 2.
9. A composition according to claim 8, wherein W is N or NR5.
10. A composition according to claim 8, wherein Y is N or NR5 and X and Y are independently selected from CH, CR4, CH2, C=Oand CHR4.
11. A composition according to claim 8, wherein R1 is benzyl optionally substituted with one or two
substituents selected from hydroxy, amino, halogen, C1-4 alkyl, C1-4 alkoxy, C1-4 alkoxycarbonyl, C1-4 alkylthio, C1-4 halo-substituted alkyl.
12. A composition according to claim 8, wherein R2 and R'2 are H.
13. A composition according to any one of claims 8 to 12, wherein R3 is H.
14. A composition according to any one of claims 8 to 13, wherein R4 is H.
15. A compound of formula (I) and pharmaceutical
acceptable salts thereof:
Figure imgf000068_0001
wherein
W is selected from CH, CR3, CH2, C=O, CHR3, N and NR5; one of X, Y, and Z is N or NR5 while the other two are independently selected from CH, CR4, CH2, C=Oand CHR4;
B is selected from the group consisting of;
Figure imgf000068_0002
wherein; A is O or S;
R1 is selected from:
C1-6 alkyl, C2-6 alkenyl or C3-7 cycloalkyl optionally substituted with OH, halogen, amino, carboxyl or saturated or unsaturated C3-10 (carbocycle or
heterocycle) optionally substituted with OH, halogen, amino, mercapto, carboxy, C1-4 (alkyl, alkoxy, alkylthio, acyl, acyloxy or alkoxycarbonyl)
optionally substituted with OH, halogen, amino or C1-4 alkoxy,; and
C3-7 cycloalkyl fused to C6-10 aryl optionally
substituted with OH, halogen, amino, mercapto, carboxy, C1-4 (alkyl, alkoxy, alkylthio, acyl, acyloxy or alkoxycarbonyl) optionally substituted with OH, halogen, amino or C1-4 alkoxy;
R2 and R'2 are idependently selected from H, or C1-4 alkyl or R1 and R2 together form a saturated or unsaturated 5 or 6 member heterocycle optionally fused to C6-10 aryl or heteroaryl;
R3 and R4 are independently selected from H, OH, halogen, amino, cyano, C1-6 (alkyl, alkoxy, acyl, acyloxy or alkoxycarbonyl) optionally substituted with OH, halogen, amino or C1-4 alkoxy, and saturated or unsaturated C3-10 (carbocycle or heterocycle) optionally substituted with OH, halogen, amino, mercapto, C1-4 alkylthio, C1-4 alkoxycarbonyl, halo- substituted C1-4 alkyl or halo-substituted C1-4 alkoxy, C1-4 alkyl, C1-4 alkoxy or carboxy;
R5 is H, C1-6 alkyl or C1-6 acyl optionally
substituted with OH, halogen, amino or C1-4 alkoxy; and
n is 0, 1 or 2 wherein;
when A IS
Figure imgf000069_0001
and when W and Y are both N or NR5, then R1 is other than allyl or 2-methoxybenzyl;
ii) when A is when either X or Z is N
Figure imgf000070_0001
or NR5, then W is N or NR5; and
iii) when A is
Figure imgf000070_0002
when Z is N or NR5, then R1 is other than methyl.
16. A compound according to claim 15, wherein W is N or NR5.
17. A compound according to claim 15, wherein Y is N or NR5 and X and Y are independently selected from CH, CR4, CH2, C=Oand CHR4.
18. A compound according to claim 15, wherein R1 is benzyl optionally substituted with one or two substituents selected from hydroxy, amino, halogen, C1-4 alkyl, C1- 4 alkoxy, C1 -4 alkoxycarbonyl, C1-4 alkylthio, C1-4 halo-substituted alkyl.
19. A compound according to claim 15, wherein R2, R'2, R3 and R4 are each H.
20. A compound according to claim 15, having
cytomegalovirus inhibiting activity.
PCT/CA1997/000182 1996-03-15 1997-03-14 Naphthyridine derivatives and their analogues inhibiting cytomegalovirus WO1997034894A1 (en)

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* Cited by examiner, † Cited by third party
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WO1998054184A1 (en) * 1997-05-30 1998-12-03 Smithkline Beecham Plc 1,6-naphthyridine anti-convulsants
WO1999029318A1 (en) * 1997-12-11 1999-06-17 Biochem Pharma Inc. Antiviral compounds
WO2000050424A1 (en) * 1999-02-22 2000-08-31 Biochem Pharma Inc. [1,8] naphthyridine derivatives having antiviral activity
EP1038868A2 (en) * 1999-03-20 2000-09-27 Bayer Aktiengesellschaft Sulfonamides as antiviral agents
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US6559145B2 (en) 2000-07-12 2003-05-06 Pharmacia & Upjohn Company Heterocycle carboxamides as antiviral agents
US6562822B2 (en) 2000-07-12 2003-05-13 Pharmacia & Upjohn Company Heterocyle carboxamides as antiviral agents
US6730682B2 (en) 2000-07-12 2004-05-04 Pharmacia & Upjohn Company Heterocycle carboxamides as antiviral agents
US6903097B2 (en) 2000-07-12 2005-06-07 Pharmacia & Upjohn Company Heterocycle carboxamides as antiviral agents
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WO2002051413A3 (en) * 2000-12-27 2002-10-10 Shire Biochem Inc Macrocyclic anti-viral compounds
US7005434B2 (en) 2001-01-19 2006-02-28 Sb Corporation Compounds and uses thereof
WO2007060028A1 (en) * 2004-12-31 2007-05-31 Gpc Biotech Ag Napthyridine compounds as rock inhibitors
WO2014079787A1 (en) 2012-11-20 2014-05-30 F. Hoffmann-La Roche Ag Substituted 1,6-naphthyridines

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TW480258B (en) 2002-03-21
AU1918797A (en) 1997-10-10
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ZA972292B (en) 1997-10-16
CN1218473A (en) 1999-06-02
GB9605437D0 (en) 1996-05-15
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EP0984967A1 (en) 2000-03-15

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