WO1994017087A1 - Tata-binding protein associated factors, nucleic acids encoding tafs, and methods of use - Google Patents

Tata-binding protein associated factors, nucleic acids encoding tafs, and methods of use Download PDF

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WO1994017087A1
WO1994017087A1 PCT/US1994/001114 US9401114W WO9417087A1 WO 1994017087 A1 WO1994017087 A1 WO 1994017087A1 US 9401114 W US9401114 W US 9401114W WO 9417087 A1 WO9417087 A1 WO 9417087A1
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ser
ala
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pro
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French (fr)
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Robert Tjian
Lucio Comai
Brian David Dynlact
Timothy Hoey
Siegfried Ruppert
Naoko Tanese
Edith Wang
Robert O. J. Weinzierl
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The Regents Of The University Of California
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Priority to EP94907933A priority Critical patent/EP0681585A4/en
Priority to JP6517394A priority patent/JPH08509119A/en
Priority to AU61311/94A priority patent/AU682340B2/en
Publication of WO1994017087A1 publication Critical patent/WO1994017087A1/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/46Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates
    • C07K14/47Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates from mammals
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K16/00Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
    • C07K16/18Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K38/00Medicinal preparations containing peptides

Definitions

  • the technical field of this invention concerns TATA-binding protein associated factors, proteins involved in gene transcription.
  • RNA polymerase synthesizes corresponding RNA.
  • Regulatory sequences generally include sites for sequence-specific transcriptional control, including promoters, enhancers, suppressors, etc; and also a site for transcription initiation.
  • RNA polymerascs alone appear incapable of initiating transcription.
  • RNA polymerase II in vitro transcription by RNA polymerase II (Pol II) can be at least partially restored by the addition of what have variously been reported to be four, five, six or seven nuclear fractions [See e.g. Matsui et al. (1980), Biol Chem 255, 1192], herein referred to as TFIIA. TFIIB, TFI1D, TFIIE, TFIIF, TFIIH and TFIIJ.
  • Pol I and Pol III appear to require at least two fractions, called respectively SL1 and UBF, and TFIIIA and TFIIIB.
  • Pol II fractions remain incompletely characterized or comprise multiple components.
  • the fractions TFIID, SL1 and TFIIB have been reported to contain a TATA binding component, henceforth, TATA-binding protein, or TBP.
  • TBP TATA-binding protein
  • TFIID TFIID
  • SL1 and TFIIIB immunoprecipitates have revealed TBP and numerous associated factors, tentatively called TBP-associated factors, or TAFs.
  • TAF TBP-associated factors
  • TAFs TATA-binding protein associated factors
  • eukaryotic nuclear proteins involved in RNA polymerase I, II, and III transcription nucleic acids encoding TAFs
  • methods of using TAFs and TAF-encoding nucleic acids are provided.
  • Recombinant TAFs, anti-TAF antibodies and TAF-fusion products find use in drug screening, diagnositcs and therapeutics.
  • the disclosed TAFs provide valuable reagents in developing specific biochemical assays for screening compounds that agonize or antagonize selected transcription factors involved in regulating gene expression associated with human pathology.
  • TAFs TATA-binding protein associated factors
  • a given TAF refers to the TAF protein, recombinant or purified from a natural source, and functional and xenogeneic analogs thereof.
  • dTAFII l 10 refers to a Pol II TAF, deriveable from Drosophila, with an apparent molecular weight of about 1 10 kD. generally as determined by SDS- PAGE under conditions described herein, in Dynlacht et al. ( 1991), Comai et al. (1992), or otherwise identified by functional, sequence, etc. data herein. It is understood that these molecular weight designations are for the convenience of nomenclature and may not necessarily correspond to actual or predicted molecular weight. Other TAFs are analogously identified herein.
  • a "portion" of a given TAF is a peptide comprising at least about a six, preferably at least about an eighteen, more preferably at least about a thirty-six amino acid sequence of the TAF.
  • portions of the TAF that facilitate functional or structural interaction with activators, TAFs, TBP, Pol I, II or III, the TATA box and surrounding DNA sequences, etc. Methods for identifying such preferred portions are described below.
  • substantially full-length is meant a polypeptide or polynucleotide that comprises at least 50% , preferably at least 70% and more preferably at least 90% of the natural TAF polypeptide or polynucleotide length.
  • Xenogeneic TAF analogs are nonhuman-, nonDrosophila-derived proteins with substantial functional or sequence identity to human and Drosophila TAFs. Of particular interest are xenogeneic TAF analogs derived from rodents, primates, and livestock animals including bovine, ovine, equine and avian species
  • “Functional” analogs of a given TAF or proteins with “substantial functional identity” to a given TAF are compounds that exhibit one or more biochemical properties specific to such TAF, such as the ability of dTAFIIl 10 to interact with Spl .
  • Modulating transcription means altering transcription, and includes changing the rate of transcription initiation, the level of transcription, or the responsiveness of transcription/transcription initiation to regulatory controls.
  • substantially pure or isolated mean that the TAF, TAF portion, or nucleic acid encoding a TAF or TAF portion is unaccompanied by at least some of the material with which it is normally associated in its natural state. While a composition of a substantially pure TAF or portion thereof is preferably substantially free of polyacrylamide. such composition may contain excipients and additives useful in diagnostic, therapeutic and investigative reagents. A substantially pure TAF composition subject to electrophoresis or reverse phase HPLC provides such TAF as a single discernable protemaceous band or peak.
  • a substantially pure TAF composition is at least about 1 % protein weight said TAF; preterablv at least about 10%; more preferably at least about 50%; and most preterablv at least 90% .
  • Protein weight percentages are determined by dividing the weight of the TAF or TAF portion, including alternative forms and analogs of the TAF such as proteolytic breakdown products, alternatively spliced, differentially phosphorylated or glycosylated, or otherwise post-translationally modified lorms of the TAF, present in a fraction by the total protein weight present
  • a biologically active TAF or TAF portion retains one or more of the TAF's native function such as the ability to specifically bind TBP, transcription factors (activators), other TAFs or anti-TAF antibodies, or to modulate or facilitate transcription or transcription initiation.
  • Exemplary assays for biological activity are described below and in the working exemplification.
  • Specific binding is empirically determined by contacting, for example a TAF, with a mixture of components and identifying those components that preferentially bind the TAF. Specific binding may be conveniently shown by competitive binding studies, lor example, immobilizing a TAF, on a solid matrix such as a polymer bead or microtiter plate and contacting the immobilized TAF with a mixture. Often, one or more components of the mixture will be labelled. Another useful approach is to displace labelled ligand. Generally, specific binding of a TAF will have binding attmitv of 10 -6 M, preferably 10 -8 M, more preferably 10 -10 M under optimized reaction conditions and temperature.
  • Portions ol TAFs find use in screening TAF expression libraries, defining functional domains of TAFs, identifying compounds that bind or associate with TAFs and the like. Accordingly, peptides encoding a portion of a TAF are provided that are capable of modulating transcription including transcnption initiation. Typically, such peptides are effective by binding to a TAF, an activator, or TBP or competitively inhibiting a TAF domain's association with another compound, typ ⁇ cally a piotein like TBP or another TAF, an activator, or DNA. For example. TAF-TAF interactions may be exploited to purify TAFs, e.g.
  • immobilized TAF200 is used to purify TAF I 10 Associational domains of TAFs are ascertainable by those skilled in the art using the methods and compositions disclosed herein.
  • Useful methods include in vitro mutagenesis such as deletion mutants, secondary and tertiary structural predictions, antibody and solvent accessibility, etc.
  • peptides derived from highly charged regions find particular use as immunogens and as modulators of TAF-protein interactions.
  • TAF mutants are used to identify regions important for specific protein interactions or otherwise involved in transcription.
  • useful assays include column binding assay and transfection studies.
  • the invention provides recombinantly produced TAFs, TAF analogs and portions thereof. These recombinant products are readily modified through physical, chemical, and molecular techniques disclosed or cited herein or otherwise known to those skilled in the relevant art. According to a particular embodiment of the invention, portions of the TAF-encoding sequences are spliced with heterologous sequences to produce fusion proteins. Such fusion proteins find particular use in modulating gene transcription in vitro and in vivo.
  • a TAF or domain thereof can be fused to a well-characterized DNA binding domain (see, e.g., Sadowski et al., (1988) Nature 335, 563-564) and the resulting fusion protein can be tested for its ability to modulate transcription or transcriptional initiation.
  • a well-characterized DNA binding domain see, e.g., Sadowski et al., (1988) Nature 335, 563-564
  • the resulting fusion protein can be tested for its ability to modulate transcription or transcriptional initiation.
  • an TAF domain can be fused with a domain having endonuclease activity for site-specific DNA cleaving.
  • TAF fusion partners include GST, Lerner epitope, an epitope recognized by a monoclonal antibody (e.g. hemagglutinin epitope and 12CA5 monoclonal antibody), glutathione S-transferase for immobilization, the SPl or VP16 activation domains, etc.
  • a monoclonal antibody e.g. hemagglutinin epitope and 12CA5 monoclonal antibody
  • glutathione S-transferase for immobilization e.g. hemagglutinin epitope and 12CA5 monoclonal antibody
  • glutathione S-transferase for immobilization
  • the SPl or VP16 activation domains etc.
  • TAFs can be further modified by methods known in the art.
  • TAFs may be phosphorylated or dephosphorylated, glycosylated or deglycosylated, with or without radioactive labeling, etc.
  • the disclosed TAF serine residues in particular provide useful phosphorylation sites. See e.g. methods disclosed in Roberts et al. ( 1991 ) Science 253. 1022-1026 and in Wegner et al. (1992) Science 256, 370-373.
  • Especially useful are modifications that alter TAF solubility, membrane transportability, stability, and binding specificity and affinity.
  • Some examples include fatty acid-acylation, proteolysis, and mutations in TAF-TAF or TAF-TBP interaction domains that stabilize binding.
  • TAFs may also be modified with a label capable of providing a detectable signal, for example, at a heart muscle kinase labeling site, either directly or indirectly.
  • exemplary labels include radioisotopes, fluorescers, etc.
  • a TAF may be expressed in the presence of a labelled amino acid such as 35 S- methionine.
  • Such labeled TAFs and analogs thereof find use, for example, as probes in expression screening assays for proteins that interact with TAFs, or, for example, TAF binding to other transcription factors in drug screening assays.
  • TAFs and analogs and portions thereof also find use in raising anti-TAF antibodies in laboratory animals such as mice and rabbits as well as the production of monoclonal antibodies by cell fusion or transformation.
  • Anti-TAF antibodies and fragments (Fab, etc) thereof find use in modulating TAF involvement in transcription complexes, screening TAF expression libraries, etc. in addition, these antibodies can be used to identify, isolate, and purify structural analogs of TAFs.
  • Anti-TAF antibodies also find use for subcellular localization of TAFs under various conditions such as infection, during various cell cycle phases, induction with cytokines, protein kinases such as C and A, etc.
  • Other exemplary applications include using TAF-specific antibodies (including monoclonal or TAF-derived peptide specific antibodies) to immuno- deplete in vitro tran.scription extracts and using immuno-affmity chromatography to purify TAFs, including analogs, or other nuclear factors which interact with TAFs.
  • compositions are also provided for therapeutic intervention in disease, for example, by modifying TAFs or TAF encoding nucleic acids.
  • Oligopeptides can be synthesized in pure form and can find many uses in diagnosis and therapy. These oligopeptides can be used, for example, to modulate native TAF interaction with other TAFs, TBP, other transcription factors or DNA.
  • the oligopeptides will generally be more than six and fewer than about 60 amino acids, more usually fewer than about 30 ammo acids although large oligopeptides may be employed.
  • a TAF or a portion thereol may be used in purified form, generally greater than about 50%, usually greatei than about 90% pure
  • Methods for purifying such peptides to such purities include various forms of chromatographic, chemical, and electrophoretic separations disclosed herein or otherwise known to those skilled in the art.
  • TBP-TAF complexes are lmmunopurified (generally, by lmmunoprecipitation) using polyclonal or monoclonal antibodies directed against a native TAF or TBP epitope.
  • TAF-specific binding proteins e.g. antibodies directed against TAF proteins, TAF-bmding TAFs. TBP.
  • TAF-bmdmg activators are used for screening expression libraries; (2) cDNA libraries are screened with potentially homologous TAF oligonucleotide sequences (alternatively, a series of degenerate oligonucleotide PCR primers derived from the homologous TAF sequence may be used to amplily probes from cDNA. See Peterson et al. (1990) Science, 248, 1625-1630, Figurel.), and, (3) TAF proteins are purified to homogeneity for protein microsequencing
  • the invention provides nucleic acid sequences encoding TAFs and portions of TAFs.
  • encoding a portion of a TAF is meant to include sequences substantially identical to sequences encoding at least a portion of a TAF. Included are DNA and RNA sequences, sense and antisense.
  • Substantial sequence identity means that a portion of the protein or nucleic acid presents at least about 70%, more preferably at least about 80%, and most preferably at least about 90% sequence identity with a TAF sequence portion. Where the sequence diverges liom native TAF sequences disclosed herein, the differences are preferably conservative, i.e. an acidic for an acidic amino acid substitution or a nucleotide change providing a redundant codon. Dissimilar sequences are typically aggregated within regions rather than being distributed evenly over the polymer.
  • a substantially identical sequence hybridizes to a complementary TAF- encoding sequence under low stringency conditions, for example, at 50°C and 6X SSC (0.9M saline/0.09M sodium citrate) and that remains bound when subject to washing at 55°C with I X SSC.
  • the invention's TAF encoding polynucleotides are isolated; meaning that the claimed sequence is present as other than a naturally occurring chromosome or transcript in its natural environment. Typically isolated sequences are removed from at least some of the nucleotide sequences with which they are normally associated with on a natural chromosome.
  • a substantially pure or isolated TAF- or TAF portion-encoding nucleic acid is generally at least about 1 % nucleic acid weight said TAF-encoding nucleic acid; preferably at least about 10%: more preferably at least about 50%; and most preferably at least 90% .
  • Nucleic acid weight percentages are determined by dividing the weight of the TAF or TAF portion-encoding nucleic acid, including alternative forms and analogs such as alternatively spliced or partially transcribed forms, by the total nucleic acid weight present.
  • the invention also provides for TAF sequences modified by transitions, transversions, deletions, insertions, or other modifications such as alternative splicing and such alternative forms, genomic TAF sequences, TAF gene flanking sequences, including TAF regulatory sequences and other non-transcribed TAF sequences, TAF mRNA sequences, and RNA and DNA antisense sequences complementary to TAF encoding sequences, equences encoding xenogeneic TAFs. and TAF sequences comprising synthetic nucleotides, e.g., the oxygen of the phosphate group may be replaced with sulfur, methyl, or the like.
  • TAF-encoding sequences or related sequences encoding proteins with TAF-like functions there will generally be substantial sequence identity between at least a portion thereof and a portion of a TAF, preferably at least about 40%, more preferably at least 80%, most preferably at least 90%, particularly conservative substitutions, particularly within regulatory regions and regions encoding protein domains involved in protein-protein interactions, particularly TAF-transcripiion factor interactions.
  • the invention 's TAF encoding polynucleotides are associated with heterologous sequences
  • heterologous sequences include regulatory sequences such as promoters, enhancers, response elements, signal sequences, polyadenylation sequences, etc. , introns, 5' and 3' noncoding regions, etc.
  • Other useful heterologous sequences are known to those skilled in the art or otherwise disclosed references cited herein. See for example, Russel Doolittle, Of URFs and ORFs, A Primer on How to Analyze Derived Amino Acid Sequences, University Science Books, Mill Valley CA.
  • TAF encoding nucleic acids can be subject to alternative purification, synthesis, modification or use by methods disclosed herein or otherwise known in the art.
  • the nucleic acids can be modified to alter stability, solubility, binding affinity and specificity, methylation, etc.
  • the nucleic acid sequences of the present invention may also be modified with a label capable of providing a detectable signal, either directly or indirectly.
  • Exemplary labels include radioisotopes, fiuorescers, biotinylation, etc.
  • Nucleic acids encoding at least a portion of a TAF are used to identify nuclear factors which interact with that TAF using expression screening in yeast as described in Current Protocols in Molecular Biology.
  • a yeast cDNA library containing fusion genes of cDNA joined with DNA encoding the activation domain of a transcription factor are transfected with fusion genes encoding a portion of a TAF and the DNA binding domain of a transcription factor.
  • Clones encoding TAF binding proteins provide for the complementation of the transcription factor and are identified through transcription of a reporter gene. See, e.g. Fields and Song ( 1989) Nature 340, 245-246 and Chien et al. (1991) Proc Natl Acad Sci USA 88, 9578-9582.
  • the invention also provides vectors comprising nucleic acids encoding a TAF or portion or analog thereof.
  • vectors comprising nucleic acids encoding a TAF or portion or analog thereof.
  • a large number of vectors including plasmid and viral vectors, have been described for expression in a variety of eukaryotic and prokaryotic hosts.
  • Vectors will often include one or more replication systems for cloning or expression, one or more markers for selection in the host, e.g. antibiotic resistance, and one or more expression cassettes.
  • the inserted TAF coding sequences may be synthesized, isolated from natural sources, prepared as hybrids, etc. Ligation of the coding sequences to the transcriptional regulatory sequences may be achieved by known methods.
  • vectors may also include a promotor operably linked to the TAF encoding portion.
  • Suitable host cells may be transformed/transfected/infected by any suitable method including electroporation. CaCl 2 mediated DNA uptake, viral infection, microinjection, microprojectile. or other established methods.
  • nucleic acids encoding one or more TAFs may be introduced into cells by recombination events. For example, a sequence can be microinjected into a cell, and thereby effect homologous recombination at the site of an endogenous gene encoding a TAF, an analog or pseudogene thereof, or a sequence with substantial identity to a TAF-encoding gene.
  • Other recombination-based methods such as nonhomologous recombinations, deletion of endogenous gene by homologous recombination, especially in pluripotent cells, etc., provide additional applications.
  • Appropriate host cells include bacteria, archebacteria, fungi, especially yeast, and plant and animal cells, especially mammalian cells.
  • Preferred replication systems include M13, ColEl, SV40. baculovirus, vaccinia, lambda, adenovirus, AAV, BPV, etc.
  • elements/ regions have been isolated and shown to be effective in the transcription and translation of heterologous proteins in the various hosts. Examples of these regions, methods of isolation, manner of manipulation, etc. are known in the art. The particular choice of vector/host cell is not critical to the invention.
  • host cells are used as a source of recombinantly produced TAFs or TAF analogs.
  • Preferred expression systems include E. Coli, vaccinia, or baculovirus; the latter two permitting the recombinant TAFs to be modified, processed and transported within a eukaryotic system.
  • TAF-encoding oligonucleotides also used to identify other TAFs or transcription factors. For example. 32 P-labeled TAF-encoding nucleic acids are used to screen cDNA libraries at low stringency to identify similar cDNAs that encode proteins with TAF -related domains. Additionally, TAF related proteins are isolated by PCR amplification with degenerate oligonucleotide probes using the sequences disclosed herein. Other experimental methods for cloning TAFs, sequencing DNA encoding TAFs. and expressing recombinant TAFs are also set out in the working exempli fication below. Other useful cloning, expression, and genetic manipulation techniques for practicing the inventions disclosed herein are known to those skilled in the art.
  • compositions and methods disclosed herein may be used to effect gene therapy. See, e.g. Gutierrez et al. ( 1992) Lancet 339, 715-721.
  • cells are transfected with TAF sequences operably linked to gene regulatory sequences capable of effecting altered TAF expression or regulation.
  • TAF complementary antisense polynucleotides may be transfected with TAF complementary antisense polynucleotides.
  • Antisense modulation may employ TAF antisense sequences operably linked to gene regulatory sequences.
  • Cells are transfected with a vector comprising a TAF sequence with a promoter sequence oriented such that transcription of the gene yields an antisense transcript capable of binding to TAF encoding mRNA. Transcription may be constitutive or inducible and the vector may provide for stable extrachromosomal maintenance or integration.
  • single-stranded antisense nucleic acid sequences that bind to genomic DNA or mRNA encoding at least a portion of TAF may be administered to the target cell at a concentration that results in a substantial reduction in TAF expression.
  • the invention provides methods and compositions for identifying agents useful in modulating gene transcription.
  • agents find use in the diagnosis or treatment of broad range of disease including cancer, cardiovascular diseases, microbial and fungal infections and particularly viral infections, inflammatory disease, immune disease, etc.
  • the ability to develop rapid and convenient high- throughput biochemical assays for screening compounds that interfere with the process of transcription in human cells opens a new avenue for drug development.
  • An overview of this therapeuitic approach is presented in Peterson & Baichwal (1993), Trends in Biotechnology, in press.
  • prospective agents are screened from large libraries of synthetic or natural compounds. For example, numerous means are available for random and directed synthesis of saccharide. pepnde. and nucleic acid based compounds, see, e.g.
  • libraries of natural compounds in the form ot bacterial, fungal, plant and animal extracts are available or readily predicable.
  • natural and synthetically produced libraries and compounds are readily modified through conventional chemical, physical, and biochemical means. Examples of such modifications are disclosed herein.
  • Useful agents are identified with a range of assays employing TAFs or TAF encoding nucleic acids.
  • protein binding assays, nucleic acid binding assays and gel shift assays arc useful approaches.
  • Exemplary assays include assaying labeled TBP binding to immobilized TAF, labeled TAF or TAF peptide binding immobilized TBP, etc.
  • Many appropriate assays are amenable to scaled- up, high throughput usage suitable for volume drug screening. Such screening will typically require the screening ol at least about 10, preferably at least about 100, and more preferably at least about 1000 prospective agents per week. The particular assay used will be determined by the particular nature of the TAF interactions.
  • a prospective agent may modify with the function of a TAF but not with transcription complex assembly.
  • a molecule that binds to a TAF but does not disrupt complex assembly is identified more readily through labelled binding assays than through gel retardation assay.
  • Assays may employ single TAFS. TAF portions. TAF fusion products, partial TAF complexes, or the complete TFIID transcription complex, depending on the associational requirements of the sui ⁇ ect transcription factor.
  • Useful agents are typically those that bind to or modify the association of transcription associated tactors. especially TAFs.
  • Preferred agents include those capable of modulating the expression of Pol II genes, particulary oncogenes (including viral oncogenes such as adenovirus EIA, human papilloma E7, and cellular oncogenes such as Rb, P53. E2F, myc, fos/jun (API), abl, etc.), genes transcribed during viral infection or activation, and sterol regulated genes.
  • Preferered agents modify, preferably disrupt. TAF-TAF, TAF-activator, TAF- coactivator (coactivators include OCA-B. dTAFIII 10, etc.) or TAF-TBP binding.
  • An especially preferred useful agent disrupts the association of a disclosed hTAF, with an activator, particularly a viral-specific activator, particularly an HIV- specific activator such as tat.
  • Useful agents are found within numerous chemical classes, though typically they are organic compounds; preferably small organic compounds. Small organic compounds have a molecular weight of more than 50 yet less than about 2,500, preferably less than about 750. more preferably, less than about 250. Exemplary classes include peptides, saccharides, steroids, and the like.
  • Selected agents may be modified to enhance efficacy, stability,
  • Structural identification of an agent may be used to identify, generate, or screen additional agents.
  • peptide agents may be modified in a variety of ways to enhance their stability, such as using an unnatural amino acid, such as a D-amino acid, particularly D-alanine. by lunctionalizing the amino or carboxyl terminus, e.g., for the amino group, acylation or alkylation, and for the carboxyl group, esterification or amidification. or the like.
  • Other methods of stabilization may include encapsulation, for example, in liposomes, etc.
  • Agents may be prepared in a variety of ways known to those skilled in the art. For example, peptides under about 60 amino acids can be readily synthesized today using conventional commercially available automatic synthesizers.
  • peptide and protein and nucleic acid agents are readily produced by known recombinant technologies.
  • compositions and selected agents disclosed herein may be administered by any convenient way that will depend upon the nature of the compound.
  • oral administration is preferred and enteric coatings may be iiulicated where the compound is not expected to retain activity after exposure to the stomach environment.
  • the amount administered will be empirically determined, typically in the range of about 1 to 1000 ug/kg of recipient.
  • Large proteins are preferably administered parenterally, conveniently in a physiologically acceptable carrier, e.g., phosphate buffered saline, saline, deionized water, or the like.
  • a physiologically acceptable carrier e.g., phosphate buffered saline, saline, deionized water, or the like.
  • such compositions are added to a retained physiological fluid such as blood or synovial fluid.
  • the amount administered will be empirically determined, typically in the range of about 10 to 1000 ⁇ g/kg of the recipient.
  • Other additives may be included, such as stabilizers, bactericides, etc. These additives will be present in conventional amounts.
  • TFIID complex In order to determine if the TFIID complex is sufficient to substitute for a partially-purified TFIID fraction, we have purified the TBP-TAF complex extensively by using an affinity resin coupled to a specific monoclonal antibody directed against TBP. Transcriptionally active TFIID purified from Drosophila embryos was obtained by eluting the complex from the antibody affinity resin with a low concentration (0.5 M) of guanidine hydrochloride in the presence of a synthetic peptide corresponding to the epitope recognized by monoclonal 42A11. The antibody used for the immunopurification remained bound to the protein G- sepharose beads and was found in the pellet. The proteins were electrophoresed on an 8 % polyacrylamide-SDS gel and detected by silver staining. The resultant gels reveal seven major TAFs in the complex ranging in size from 30 to over 200 kD.
  • TFIID complex was used to immunize a mouse, and monoclonal antibodies were generated against TAF110 (see Experimental Procedures below).
  • the serum from the immunized mouse was also collected and polyclonal antibodies used to screen a ⁇ gt 11 expression library constructed from Drosophila embryo cDNA (Zinn et al., 1988)
  • One clone was tentatively classified as a TAF110 cDNA because it produced protein that cross-reacted with independently isolated anti-TAF 110 monoclonal antibodies.
  • This partial cDNA clone was subsequently used as a probe to isolate hill-length cDNAs from a ⁇ gtlO library (Poole et al.,1985). The longest clone obtained was 4.6 kb.
  • This cDNA is polyadenylated at the 3' end and appears to be nearly full-length, based on the size of the mRNA, as determined by Northern blot analysis.
  • the 4.6 kb cDNA clone contains a long open reading frame coding tor a protein of 921 amino acids (SEQUENCE ID NO: 1), with a calculated molecular weight of 99.4 kD and an estimated pi of 10.1.
  • SEQUENCE ID NO: 1 921 amino acids
  • the TFIID complex was immunopurified from fractionated embrvo nuclear extract, and the TAFs were separated from TBP and the antibody by elution with 1 M guanidine-HCl.
  • the purified TAFs were fracuonated on a C4 reverse phase HPLC column.
  • Three adjacent fractions containing TAF l 10 as the major species were cleaved with the protease lys-C, and the resulting peptides were purified and sequenced.
  • Three peptide sequences were found that match the predicted amino acid sequence of the TAF110 cDNA
  • TAF 1 10 protein in a variety of cell types.
  • the protein was expressed from the cloned gene in a baculovirus expression system and detected by western blot using a TAF110 monoclonal antibody.
  • the protein encoded by the TAF110 cDNA has the same apparent molecular weight as the endogenous protein in the TFIID fraction derived from Drosophila cells, and the protein produced from the cloned gene cross-reacts with monoclonal antibodies directed against the TAF110 protein isolated from embryos.
  • TAFl 10 appears to be a single copy gene in Drosophila based on low- stringency Southern blot analysis.
  • the TAF110 gene is located at 72D,4-5 on the left arm of the third chromosome. There are not any previously identified Drosophila genes assigned to this chromosomal location (Lindsley and Zimm, 1992).
  • Hybridomas producing antibodies against TAF110 were selected by screening cell culture supematants for those containing antibodies that specifically recognize the l 10 kd protein in a western blot. For westerns, approximately 50 ug of the TFIID fraction was immunoprecipitated with antibodies against dTBP or TAFl 10.
  • the ⁇ -TAFI 10 monoclonal antibody 33G8 was obtained from a hybridoma culture medium and purified by binding to protein G-sepharose.
  • TAF110 Proteins were eluted from the resin by boiling in sample buffer, electrophoresed on 8% polyacrylamide gel. and silver stained. Several of the a-TAF110 monoclonals that were obtained by this method specifically immunoprecipitate the same set of proteins as a-dTBP antibodies. This demonstrates that at least part of TAF110 is accessible to our antibodies, and therefore exposed in the native TFIID complex and positioned for interaction with activators.
  • Monoclonal antibodies specific for other Drosophila TAFs can also immunopurify the same TFIID complex as a-TBP and ⁇ -TAFFII0 antibodies.
  • TBP-containing complexes that might contain different collections of TAFs or if the activity of the TAFs could be modulated by post- translational modifications.
  • TAF200 does not stain as intensely as the other TAFs and TBP. and. on this basis, might not be present in all complexes.
  • this protein seems to be an authentic member of the major TFIID complex since antibodies directed against TAF200 immunopurify a set of proteins that appear to be identical to complexes purified by antibodies directed against TBP or other TAFs.
  • the preparations of the purified TFIID complex contain some polypeptides that are less abundant than the major TAF proteins. Based on western analyses with ⁇ -TAF antibodies, these minor species appear to be proteolytic breakdown products of larger TAFs or substoichiometric TAFs.
  • the TAF110 coding sequence contains several regions which are rich in glutamine residues or rich in serine and threonine residues, and the C-terminal third of the protein is highly charged.
  • the C-terminal region of the molecule contains 32% acidic or basic residues.
  • Spl received one of the highest scores in the NBRF protein sequence data base search for similarity to TAF110.
  • the amino terminal third of TAF110 has an organization similar to the activation domains of Spl , consisting of glutamine-rich regions flanked by serine-threonine rich domains. The two proteins share 21 % amino acid identity and 35% similarity over 260 residues.
  • TAF110 N-terminal region of TAF110 could function as a target for the Spl activation domains in a superactivation assay.
  • the amino terminal 308 residues of TAF110 were fused to the DNA binding domain of the GAL4 protein, G4(1-147), and tested in a transient cotransfection assay in Drosophila Schneider cells.
  • This hybrid construct by itself, weakly activates (4 fold) a reporter gene which is dependent on GAL4 binding sites. This low level of activity is similar to the modest activation observed with constructs containing the Spl B domain fused to GAL4.
  • the superactivation assay in Drosophila Schneider cells provided the first hint that TAF110 mav serve as a eoactivator tor Spl. However, it is difficult to assess in this assay whether TAF110 can interact with Spl in the absence of the other TAFs which are present in Drosophila cells. The superactivation assay also imposes certain limitations to the number and types of constructs that can be tested. Moreover, it seemed prudent to establish several independent assays to investigate the relationship between TAF110 and transcription activation domains.
  • a functional activation domain is recruited to the target promoter bearing GAL4 binding sites and the lacZ reporter gene is expressed only if there is a protein-protein interaction between the partners being tested.
  • TAF110 Full-length TAF110 as well as a variety of deletion mutants were fused to the DNA binding domain of GAE4, G4( 1 - 147). In contrast to the situation in Drosophila cells, the ammo terminal region of TAF110 cannot activate
  • the Spl activation domains were fused to the acidic activation domain ol GAE4. Each ol the Spl glutamine-rich activation domains A or B can independently interact with tull-length TAF110 as judged by activation of the reporter gene.
  • yeast bearing an integrated GALl:lacZ fusion were transformed w ith two plasmids: ( 1 ) fusions to the DNA binding domain of GAL4 (residues 1 - 147), and (2) fusions to the acidic activation domain (AAD; residues 768-88 l ol GAL4), and the resulting /3-gal activity was measured (expressed in units/ mg of protein).
  • domain A of Spl appears to interact more el ficientlv than domain B, and this correlates well with the previous finding that A is a better activator tor transcription than domain B (Courey and Tjian, 1988).
  • TAF110 As in Drosophila cells, residues 1-308 of TAF110 are sufficient for the interaction, while regions 1- 137 and 138-308 are inactive.
  • the full-length TAFl 10 fusion is more active than the N308 construct in this assay.
  • This effect may be due to dil lerential protein expression, it is possible that the C- terminal regions ol TAF110 contribute to interactions with Spl .
  • the protein- protein interaction assay in yeast further supports the idea that TAF110 interacts, directly or indirectly, with the activation domains of Spl , and the strength of this interaction appears to be correlated with transcriptional function.
  • TAF proteins that have been tested in the superactivation assay or the yeast assay displayed no delectable interaction with Spl .
  • the GAL4 fusion proteins that these assays rely on might not be able to participate in all the correct interactions because some surfaces could be sterically blocked. Therefore, additional strategies, such as the use of full length Spl, are used to test for other potential interactions.
  • dTAF110 does not interact with other activators tested
  • TAF110 can interact with both Spl domains A and B. which have no significant homology other than high glutamine content, but not Antp and bed which are even more glutamine-rich than Spl, it appears that glutamine content alone may not be a sufficient criterion for the classification of functionally similar activation domains.
  • TAF110 The N-terminal region of TAF110, containing the glutamine-and serine/threonine-rich sequences, is able to function as a weak activation domain in Drosophila cells, suggesting that this region can interact with a component of the native TFIID complex
  • TAF110-TAF110 interactions We found that the N-terminal region of TAF110 is able to interact with itsell as judged bv activation of the lacZ reporter gene in the yeast assay (figure 6A) This is another example of functional similanty between the Spl activation domains and the N-terminal region of TAF110, which can interact with each other as well themselves
  • the TFIID complex is also required at promoters that lack a TATA box, one ot the TA1 s might be required tor promoter recognition through the initiator element.
  • the TAFs interact with each other, at least one TAF interacts with TBP, and one interacts with RNA polymei ase II or one ot the basal factors.
  • the superactiv ation assay m Schneider cells and the yeast experiments are both indirect assays lot piotem-protem interactions. Therefore, we also determined the ability ol Spl to bind directly to TAF110 in vitro. Biotinylated ohgonucleotides containing Spl binding sites were coupled to streptavidin-agarose resin. The resin was incubated w ith Spl that had been over-expressed and purified from HeLa cells intected with a vaccinia virus expression vector (Jackson et al., 1990). After allowing Spl to bind DNA on the beads, the unbound Spl was washed away. Control resin that lacked Spl was also prepared and tested in parallel.
  • Protein fractions were run on SDS-PAGE and analyzed by autoradiography or by silver staining. After allowing TAF110 to bind Spl , the beads were pelleted and the supernatant containing the unbound proteins was collected. The resin was washed 4 time. The specifically bound proteins were eluted by incubating the beads in buffer containing 0.2 M KCl. followed by 1.0 M KCl. The Spl protein bound to the DNA is eluted by treatment w ith 1 .0 M salt. Labeled TAF110 protein is detectable in the eluted tractions No detectable TAF110 protein bound to the DNA affinity resm in the absence ol Spl protein.
  • TAF110 is selectively retained on the resm containing DNA-bound Spl. but TAF110 does not bind the control resin that lacks Spl . Most of the bound TAF110 elutes with the Spl at 1.0 M KCl with a lower amount eluting at 0.2 M KCl. Analysis of the tractions by silver staining indicates that Spl is the ma)or protein detectable in the high salt eluate, indicating that the unlabeled proteins present the reticulocyte lysate. which constitute the vast majority of the total protein in the input, are not non-specifically binding to Spl in this assay.
  • deletion mutants of TAF110 could bind to Spl in this in vitro assay (mutants are expressed from the N-terminal).
  • a 1 - 137 mutant was not able to bind Spl in vitro, while some binding was obtained w ith a 1 -308 mutant.
  • Mutants of 308-921 , 447-921 , and 571-921 were all effective m binding Spl , while C-termina deletions beyond 852 from these mutants eliminated Spl binding.
  • TAF110 cannot directly bind to TBP by itself and that at least one additional TAF is required to connect TAF110 and TBP.
  • ⁇ -TAF110 antibodies fail to coprecipitate both in vitro expressed TAFl 10 and TBP and similarly with ⁇ -TBP antibody.
  • TFIID complex 1 mM DTT
  • TFIID complex 10 mg/ml of the peptide mimicking the epitope of 42A 1 1 (sequence: NH2-RPSTPMTPATPGSADPG- COOH) in HEMG buffer containing 0.5 M guanidine-HCl.
  • the eluate was dialyzed against 0. 1 M KCI-HEMG-ND. and then assayed for transcription activity.
  • Nuclear extracts derived from approximately 1 kg of Drosophila embryos were prepared and fractionated as previously described (Dynlacht et al., 1991; Wampler et al., 1990).
  • the TFIID complex was purified with polyclonal ⁇ -dTBP antibodies as previously described (Dynlacht et al., 1991) or with a monoclonal antibody as described above.
  • the TAFs were separated from TBP by elution of the protein A-antibody resin with 0. 1 M KCl-HEMG buffer containing 1.5 mM DTT. 0. 1 % LDAO (lauryl dimethylamineox.de), and 1M Gd- HCl.
  • TAFs were eluted by batch incubation of the resin with an equal volume of buffer for 25 min at 4 °C. This procedure was repeated and the two supematants were combined. Urea was added to 8 M, DTT to 10 mM, and cysteines were modified with 4-vinylpyridine.
  • TAFs were fractionated by reverse phase HPLC on a 300 angstrom C4 column (2. 1 X 30 mm).
  • TAF110 consistently eluted at 35 % buffer B.
  • Fractions containing TAF110 (approximately 5 ⁇ g) were lyophilized. resuspended in 100 mM TRIS, pH 8.0, and 2 M urea, and incubated at 55 °C for 10 min. 150 ng of the protease lys C was added and the protein was digested for 20 hr at 37 °C.
  • Peptides were chromatographed and sequenced as previously described (Williams et al., 1988
  • TAFs were separated by electrophoesis and transferred to membranes.
  • the separated TAFs were digested with LysC or trypsin and the resultant peptides eluted, chromatographed and sequenced. See Fernandez et al. , ( 1992) Analytical Biochemistry 201 , 255-264.
  • Transcription factor tractions were reconstituted with basal factor fractions derived from 0- 12 hr Dr osoplula embryo nuclear extracts essentially as previously described (Dynlacht et al. , 1991 ) except that TFIIB was separated from
  • TFIIE/TFIIF and pol I I w as tractionaied further on a phosphocellulose column.
  • Each reaction contained 0.5 ug ot the TFIIB fraction (S-sepharose 0.5 M eluate), 1.5 ug of the TFIIE/TFI I F fraction (S-sepharose 0.25 M eluate), and 0.25 mg of the pol II fraction (phosphocellulose 0.4 M eluate).
  • Some reactions contained 1.5 ug of the TFIID traction or 2 ng of purified, recombinant dTBP that had been expressed in E. coli ( Hoev et al. , 1990).
  • the template for the in vitro transcnption reaction was BCAT (Eillie and Green, 1989) containing 3 Spl binding sites, and transcription was assayed by primer extension.
  • Immunopurified TFIID complex (approximately 10 ug/ injection) was mixed with Ribi's ad ⁇ ivant and iniected mtraperitoneally into a Swiss-Webster mouse at days 0, 7, and 2 1. The initial immune response was monitored at day 28 and boosted further by two biweekly injections of more antigen. After an intravenous injection ot one further dose of antigen the spleen was dissected out and electrofuscd with myeloma cells. Approximately 600 supematants from 96-well dishes (each well containing on average 5 independent hybridomas) were assayed on western strip blots lor cross-reactivity with immunopurified TFIID complex proteins. Hybridomas f rom w ells producing anti-TAF and/or anti-TBP antibodies were cloned by limited dilution and tested by Western blotting and
  • the polyclonal antiserum obtained from the immunization scheme described above was used at a 1 / 1000 dilution to screen approximately 5 x 10 5 plaques of a size-selected ( > 1.8 kb) 9 - 12hr Igt I I Drosophila cDNA library (Zinn et al. , 1988). Positive clones w ei e placiue-purilied to homogeneity and tested for cross- reactivity against anti-TAF monoclonal antibodies of known specificity. One clone, ⁇ 106, cross-reacted strongly w ith several independent anti-TAFHO hybridomas.
  • Insert DNA (2.6 kb) from ⁇ 106 was purified and labeled using Klenow polymerase and random hexamer priming (Amersham).
  • 10 6 recombinant phage from a cDNA library Poole. et al ., 1985) prepared from 3-9 hour Drosophila embryos were screened as pieviouslv described ( Kadonaga et al. , 1987). 24 positives were obtained in duplicate on the primary screen; 12 of these were randomly selected tor rescreening, and 10 ot 12 were positive on the secondary screen. All 10 of these cDNA clones were found to be related to each other on the basis of restriction mapping and cross-hybridization.
  • the inserts were subcloned into pBS-SK (Stratagene) in both orientations, a nested set of deletions was constructed with exonuclease IlI, and the clones were sequenced by the dideoxy method.
  • the ⁇ 110- 1 clone was found to be 37 nucleotides longer at the 5' end than the ⁇ 110-5 clone and missing 1.5 kb on the 3' end.
  • the SEQUENCE ID NO: 1 is a composite of the ⁇ 110- 1 and ⁇ 110-5 sequence.
  • Ndel site w as created at the initiating methionine using a PCR based strategy.
  • a 3. 1 kb Ndel-BssHII fragment containing the entire coding sequence was subcloned into the Smal site of the baculovirus expression vector pVL1392 (Pharmingen).
  • Recombinant baculoviruses were selected by co-transfection of Sf9 cells with the expression vector and linear viral DNA as described by the supplier (Pharmingen). Samples lor the w estern blot were prepared by infecting SF9 cells with recombmant virus obtained I rom the transfection supernatant.
  • the yeast strain Y 153 (a. gal4, gal80, his3, trpl-901 , ade2-101 , ura3-52, leu2-3, 1 12, URA3: : Gall:lacZ. LYS2: :Gal-His3) was transformed with two plasmids according to the method of Shiest! and Gietz (Schiestl and Gietz, 1989).
  • the Gal4 DNA binding domain hybrids were constructed in the vector pAS 1.
  • pASl is a 2 ⁇ plasmid with TI .P selection that expresses fusions to Gal4(1-147) from the ADH promoter.
  • GAL4( 1- 147) For expression of GAL4( 1- 147), an Xbal linker containing stop codons in all three reading frames was inserted in pASl immediately downstream of the GAL4( 1 - 147) coding sequence.
  • G4-1 10 (fl) contains the entire coding region of the TAF l 10 on an Ndel-BssHII fragment, and the shorter G4- 1 10 fusions contain fragments as described for the Drosophila expression vectors.
  • G4-80 (fI) contains an Ndel-Xbal fragment that includes the entire coding region of Drosophila TAF80.
  • G4-40 (fl) contains an Ndel-EcoRV fragment encoding Drosophila TAF40.
  • G4-dTBP( 191 C) contains an Ndel fragment derived from pAR- 191 C containing the conserved C-terminal domain (Hoey et al., 1990). The reading frame across all fusion junctions was verified by sequencing, and the protein expression was verified by western blot analyses with either ⁇ -TAF or ⁇ -GAI .4 antibodies, with the exception of G4- 1 10(N137).
  • the acidic activation domain fusions were constructed in the vectors pGADlF, pGAD2F or pGAD3F which differ only in the reading frame of a unique Bam site (Chien et al.. 1991 ). These 2 ⁇ plasmids with LEU2 selection express fusions to activating region I I ( residues 768-881 ) of GAL4 from the ADH promoter.
  • Spl region A consists of amino acids 83-262 and Spl region B consists of residues 263-542: these were cloned as BamHI-Bglll fragments from the plasmids pKSABg 10 and pKSBG lespectively
  • the C-terminal 100 amino acids of CTFl (residues 399-449) were cloned as a Bglll-EcoRI fragment (Mermod et al. , 1989).
  • the Antp construct w as made by subcloning a Bam HI fragment containing the activation domain (Courev et al , 1989) Bed residues 249-489 (Driever et al. , 1989) were cloned on a Sall fragment derived from pPac-bcd. The reading frame across all fusion junctions w as veri fied by sequencing.
  • Quantitative ⁇ -galactosidase assays were performed as described (Himmelfarb et al. , 1990) except cells were grown to mid log in selective media containing 2 % glucose Assays w ere performed in triplicate and activity is expressed as units/mg of total protein
  • a 3. 1 kb Ndel-BssHll fragment containing the entire TAF110 coding region was subcloned into the plasmid pTbSTOP (Jantzen et al. , 1992), which contains the b-globin untranslated leader downstream of a T7 promoter.
  • the plasmid was linearized with Xbal, and the gene was transcribed in vitro with T7 RNA polymerase.
  • ⁇ inet labeled protein was synthesized in vitro in a rabbit reticulocyte lysate (Promega)
  • TAF110 was synthesized in vitro in an E. coli derived S30 transcription/translation extract (Skelly et al. , 1987).
  • Spl protein was ovcrexpressed in HeLa cells using a vaccinia virus expression vector (Jackson et al. , 1990) and puri f ied by wheat germ agglutinin (WGA) affinity chromatography ( Jackson and Tjian 1990), prior to DNA affinity purification as outlined below.
  • WGA wheat germ agglutinin
  • DNA altmity resin was prepared as follows: 5'-biotmylated
  • the beads were incubated with WGA-purified Spl in buffer Z' (25 mM HEPES, pH 7.6, 20% glycerol, 0. 1 % NP-40, 10 mM ZnSO 1 . I mM DTT) containing 0. 1 M KCl for 2 hours at 4 °C. Spl was bound to the resm at a concentration of approximately 1 mg/ml of beads.
  • Immunopurification ol the Drosophila TFIID complex using anti-TBP antibodies results in the purification of a large muitiprotein complex consisting of TBP and 7 major TAFs.
  • TAFs and TBP immunoprecipitations iron, the TFIID traction.
  • the pattern and stoichiometry of TAFs and TBP is indistinguishable Irom the ones described previously using either anti-TBP (Dynlacht et al . , 199 1 ) or anti- dTAF(II)- 110K (Hoey et al. , 1993) antibodies.
  • Genomic DNA sequencing allowed us to extend the open reading frame by approximately 1 kb before encountering noncoding (presumanblv intronic) uences. Inspection of the open reading frame encoded by the cDNA clones reveals a protein sequence which displays an extensive similarity to the human 'Cell Cycle Gene I ' (CCG 1) gene previously described by Sekiguchi et al.. 1991 . Many of the sequence elements defined in the CCG1 genes arc also present in the dTAF-250K encoding sequence.
  • DN250 was capable of interacting with TBP.
  • Monoclonal antibody 30H9 was bound to protein A or G beads and incubated with extracts from baculovirus infected cells. Under these conditions DN250 is specifically immobilized on the beads. After washing of f unbound material we added an extract containing partially purified TBP (also expressed in the baculovirus system). TBP was specifically bound to beads carrying the immunopurified TAF250-C180 protein whereas beads containing antibody only failed to do so. Further evidence for this direct TBP-TAF interaction by carrying out protein blots. The ability of a protein representing appr. 60% of the full-length 250K protein to bind TBP demonstrates conclusively that the cloned C-termmal part is sufficient for TBP binding.
  • TBP is the only component of the general transcriptional machinery capable of sequence-specific binding to the TATA box. We therefore were interested to see how interaction of TBP with TAF250-C 180 affected the specificity and affinity of DNA binding.
  • TBP was added to a 32-P labelled DNA fragment containing the -33 to +55 region of the adenovirus maior late promoter and DNA-binding was monitored using a gelshitt assay. The intensity of probe DNA shifted by TBP increased substantially in presence ol purified TAF250-C180 wheras TAF250-C180 alone did not dctectably bind to DNA.
  • TBP/TAF250-C 180 complex for DNA was due to additional contacts with DNA provided by the TAF250-C 180 protein we carried out footprinting studies, again using the adenovirus maior later promoter region as a probe. TAF250 and TA F l I O Speci f ical ly Interact With Each Other, even in Absence of TBP
  • pGEX-2TK was linearized with Smal, phosphatase-treated and the ligated with gel-purified Ndel fragments of either pARdTFIID or pARdTFIID-191C (Hoey et al., 1990).
  • Generation of 32-P labelled GST fusion protein, protein blotting and hybridization were carried out essentially as described in Kaelin et al., 1992.
  • the monoclonal antibodies described in this study were derived as described in Hoey et al.( 1993). Briefly, a Swiss-Webster mouse was immunized with intact immunopurified Drosophila TFIID complex. After fusion hybridoma supematants containing anti-dTAFII-250K antibodies were selected using stripblots containing SDS-gel-sep arated TBP and TAFs. Two such cell lines, 2B2 and 30H9, were then cloned to homogeneity by limited dilution.
  • cDNA #5 was inserted into the EcoRI site of Baculovirus-expression plasmid pVL1393 (Pharmingen). The resulting construct was co-transfected with 'BaculoGold' viral DNA ( Pharmingen) into Sf9 cells. After 3 days cells were harvested and expression of the DN250 protein was monitored by Western blotting using the anti-dTAFI I-250K monoclonal antibody 2B2. The recombinant virus-containing supernatant w as used to infect large scale cultures of Sf9 cells. We typically prepared whole cell extracts from 1 liter of plate cultures of infected Sf9-cells by sonicating them in HEMG-ND/0.
  • HEMG-ND contains 25mM HEPES. pH7.6. mM MgCl2 0. 1 mM EDTA. 0. 1 % NP40, 1 mM PMSF, 1.5 mM DTT. 5mg/ml leupeptin ).
  • the supernatant was partially purified
  • Protein G-beads w ere preloabded with monoclonal antibodies and incubated with various cell extracts f ro m Baculovirus-mfected cell tractions or 35S-labelled dTAFII1 10 prepared by in vitro translation After 45 minutes on ice, unbound protein was removed w ith several washes with HEMG-ND. hTAFII250 purification and cloning
  • TAF is encoded by IH I
  • this cDNA was expressed as a GST fusion protein, purified the tagged protein by glutathione affinity chromatography, and raised antibodies against this recombinant protein. Antisera directed against GST-1H1 specifically crossrcacted with the 250 kD TAF, indicating that a portion of the gene encoding h TAFI I250 had been isolated.
  • hTAFII250 To test for a direct interaction between hTAFII250 and TBP, we performed a Far Western analysis with radiolabellcd TBP and antibody immunopurified HA-tagged h TAFII250. The full-length hTAFII250 is capable of interacting directly with TBP in vitro, even in the absence of other TAFs or coactivators. These results and the analysis of the independently cloned Drosophila TAFII250 suggest that this largest TAF is responsible for the initial assembly of the TFIID complex by binding directly to TBP and other TAFs.
  • hTAFII250 also interacts efficiently with a truncated version of human TBP which contains only the conserved C-terminal 180 amino acids.
  • a construct containing the "species-specific" N-terminal domain of human TBP failed to interact with hTAFII250.
  • CCG 1 is a nuclear phosphoprotein with several domains characteristic of transcription factors including a putative HMG-box and a proline-rich cluster. Based on these structural motifs, Sekiguchi et al. suggested that CCG1 might work as a sequence-specific transcription factor needed for regulating genes involved in the progression through G l . However, it now seems clear that CCG 1 or a related product is part of the TFIID complex and is not a promoter-specific transcription factor.
  • the G1 arrest in ts13 is due to the failure of a defective TFIID complex to mediate activation by a subset of cellular transcription factors that govern cell cycle genes, e.g. thymidine kinase and dihydrofolate reductase genes.
  • the presence of a putative DNA binding domain, the HMG box, may suggest that once hTAFII250 forms a complex with TBP. some portion of this large subunit of TFIID may contact DNA, perhaps downstream of the initiation site.
  • Immumoprecipitation reactions were carried out according to a modified version of previously described procedures (Tanese et. al.). 0.5 mg of affinity purified a-hTBP antibody was added to 200 mg of hTFIID (phosphocellulose 0.48 - 1.0 M KCl) fraction, and the mixture nutated for 2 - 4 hrs at 4oC. Protein A Sepharose was then added and nutation continued for an additional 2 - 4 hrs. Antibody-antigen complexes were pelleted by low-speed centrifugation, washed four times with 0. 1 M KCl - HEMG (25mM Hepes, 12.5 mM MgCl2, 0.1 mM EDTA.
  • hTFIID complex was subjected to 8% SDS-PAGE and silver stained.
  • the proteins were blotted onto nitrocellulose membrane and hybridized with 35S-labeled hTBP (Kaelin et al.).
  • pTbhTBP was used to in vitro transcribe hTBP RNA which was in vitro translated using 120 mCi 35S-methionine ( > 1000 Ci/n.Mol. Amersham) in reticulocyte lysate (Promega).
  • Antigen used to immunize mice for antibody production was prepared as follows.
  • the eluted TAFs were dialized against 0. 1 M KCl - HEMG containing 0. 1 % NP-40 and 1 mM DTT.
  • the mixture of proteins containing 1 -2 mg of each TAF was used to immunize a mouse.
  • Test bleeds were taken and the immune response monitored by Western blot analysis. After a series of five boosts, the mouse was sacrificed and the spleen was used for the production of monoclonal antibody producing hybridoma cells lines. The identification of hybridoma cell lines producing hTAF specific antibodies was determined by Western blot analysis of eluted TAFs.
  • PCR-I forward primer #1: 5'-TATTTCCGGCATATGGGACCCGGCTG-3' (position 40 to 65, containing an engineered Ndel restriction site at the translation start codon) and reverse primer #2: 5'-GAAGTCCACTTTCTCACCAG-3' (position 578 to 597).
  • PCR-II forward primer #3: .5'-TACCAGCAGCATATGGGGAGCTTGCAG-3' (position 421 to 447) and reverse primer #4:
  • HA-tagged version of 1.TAFII250 we generated a plasmid, pSK-HAX. containing the hemagglutinin antigen (HA) epitope, factor X cleavage site, and in frame Ndel cloning site.
  • HA hemagglutinin antigen
  • factor X factor X cleavage site
  • Ndel cloning site A 6.3 kb Ndel/Asp718 fragment from phTAFII250 was inserted into pSK-HAX to generate pHAX-hTAFII250.
  • hTAFII250 was inserted into the Xbal site of the vaccinia virus expression vector pAbT4537 (Applied bioTechnology Inc.). Extracts from recombinant virus, vhTAFII250, or control virus ( New York City Board of Health strain of vaccinia virus) infected HeLa cells ( Dynlacht 1989) were fractionated by phosphocellulose chromatography as described (Tanese et al.). hTFIID complexes from the 0.48 - 1.0 M KCl fraction were immunoprecipitated with affinity-purified a-hTBP antibodies, subjected to 8% SDS-PAGE and analyzed by Western blotting.
  • hTAFII250 interacts with hTBP in yeast
  • hTAFII250 fused to the DNA binding domain of GAL4 (residues 1-147), was constructed by inserting a 6.0 kb Ndel/BamHI fragment derived from pvhTAFII250 into the pASl vector.
  • the activation domain fusions were obtained by cloning inserts into the p GAD I F vector (Chien et al.).
  • the hybird proteins generated included the acidic activation domain of GAL4 (residues 768-881) fused to either full-length . residues 160-339. or residues 1 - 159 of hTBP.
  • LYS2::Gal-His3 as described (Chien et al. ) and b-galactosidase assays performed according to published procedures ( Hoey et al).
  • Drosophila TBP and dT A FII250 interact with the C-terminal portion of dTAFII150 Radiolabeled in vitro translated dTAFII 150 bound efficiently to immobilized HA-dTBP or dTAFI I250 ⁇ N (sec Weinzierl et al ( 1993) Nature 362, 511-517).
  • dTAFII 1 10 and other TAFs failed to interact selectively with dTAFII150, showing that dTAFI I 150 interacts with at least two subunits of the TFIID complex, dTBP and dTAFII250 . which also contact each other.
  • dTAFII150 ⁇ N binds TBP and dTAFII250 ⁇ N with the same effenciency as the full length protein.
  • TSM-1 associates with TBP and TA FII250
  • TSM 1 ⁇ N (C-terminal 920 residue portion) bound efficiently to yTBP as well as H ⁇ -dTBP: hence we conclude that yeast contain a TAFII250 and TSM- 1 is a TAF.
  • the activation domain of the Drosophila regulator NTF-1 (Neurogenic Element Binding Transcription Factor- 1 ) interacts with dTAFII150.
  • NTF-1 immuno-copurif ies with dTFIID using anti-dTBP, indicatin that one or more subunits of the dTFIID interacts directly with NTF-1.
  • dTAFII 150 was immunopurified from Sf9 extracts containing dTAFII 150.
  • the immobilized TAF was mixed with recombinant NTF-1, the isolated complex was analyzed by SDS-PAGE, and the presence of NTF-1 was detected by protein immunoblot anaysis, showing that NTF-1 directly interacts with dTAFII 150.
  • dTAFII80 (SEQ ID NO:4. 5)
  • dTAF 150 (SEQ ID NO: 19, 20 )
  • hTAFII250 (SEQ ID NO: 10. 1 1 )
  • hTAFI48 (SEQ ID NO:29. 30)
  • hTAFI l 10 (SEQ I D NO:31. 32) were obtained as described above. Additional methods relating to Poll TAFs may be found in Comai et al . ( 1992) Cell 68. 965-976. It is evident from the above results that one can use the methods and compositions disclosed herein for making and identifying diagnostic probes and therapeutic drugs. It will also be clear to one skilled in the art from a reading of this disclosure that advantage can be taken to effect alterations of gene expression: both genes encoding TAF and genes amenable to TAF-mediated transcriptional modulation. Such alterations can be effected for example, using a small molecule drug identified with disclosed TAF-based screening assays.
  • nucleic acids encoding TAFs and Methods of Use.
  • MOLECULE TYPE cDNA
  • xi SEQUENCE DESCRIPTION: SEQ ID NO:3:
  • AAAGCAGTGC GCTGACTTCA AGCGAACAGG CATGGACTCC AATTGGTGGG TTATAAAGCC
  • AAGATTCTCA AGCGTCATGG TGGTGATGAT GGCAAGCGTC GCAGCGGATC TAGCTCTGGT
  • TGT TCC GAG GAC AGC ACC ATA AGG CTG TGG TCT CTG CTC ACC TGG TCC

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Abstract

TATA-binding protein associated factors, TAFs, nuclear proteins involved in RNA polymerase I, II, and III transcription, and nucleic acids encoding TAFs are disclosed. The disclosed methods and compositions find use in developing pharmaceuticals, diagnosis and therapy.

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TATA-BINDING PROTEIN ASSOCIATED FACTORS, NUCLEIC ACIDS ENCODING TAFS, AND METHODS OF USE
The research carried out in the subject application was supported in part by grants from the National Institutes of Health. The government may have rights in any patent issuing on this application. CROSS-REFERENCE TO RELATED APPLICATION
This Application is a continuation-in-part of Application Serial No.
08/087, 119 filed June 30, 1993, which is a continuation-in-part of Application Serial No. 08/013,412 filed January 28, 1993. INTRODUCTION
Technical Field
The technical field of this invention concerns TATA-binding protein associated factors, proteins involved in gene transcription. Background
Gene transcription requires the concerted action of a number of molecules. DNA provides regulatory sequences and a coding sequence, or template, from which an RNA polymerase synthesizes corresponding RNA. Regulatory sequences generally include sites for sequence-specific transcriptional control, including promoters, enhancers, suppressors, etc; and also a site for transcription initiation. For review, see Mitchell and Tjian ( 1989), Science 245, 371 -378. RNA polymerascs alone appear incapable of initiating transcription.
However, in vitro transcriptional activity of RNA polymerases can be restored by the addition of nuclear extracts or fractions thereof. For example, under certain conditions, in vitro transcription by RNA polymerase II (Pol II) can be at least partially restored by the addition of what have variously been reported to be four, five, six or seven nuclear fractions [See e.g. Matsui et al. (1980), Biol Chem 255, 1192], herein referred to as TFIIA. TFIIB, TFI1D, TFIIE, TFIIF, TFIIH and TFIIJ. Pol I and Pol III appear to require at least two fractions, called respectively SL1 and UBF, and TFIIIA and TFIIIB.
Many of these transcription fractions remain only partially characterized.
For example, all but one of the Pol II fractions remain incompletely characterized or comprise multiple components. The fractions TFIID, SL1 and TFIIB have been reported to contain a TATA binding component, henceforth, TATA-binding protein, or TBP. Groups of the present Applicants have reported anti-TBP antibodies capable of immunoprecipitating TBP from TFIID, SL1, and TFIIIB.
TFIID, SL1 and TFIIIB immunoprecipitates have revealed TBP and numerous associated factors, tentatively called TBP-associated factors, or TAFs. Furthermore, preliminary experiments indicated that the TBP and non-TBP (TAF) fractions, when combined, facilitated at least some sequence-specific transcription activation.
Unfortunately, it is not clear from the above art that there is any transcriptional activity in the non-TBP fractions of TFIID, SL1 or TFIIB immunoprecipitates. For example, the reported apparent functional
complementarity of the TBP and non-TBP fractions might result from the influence of antirepressors, inhibitor inhibition, etc. Furthermore, the coactivator transcriptional activity attributed to the non-TBP fractions could result from one or more components unrelated to the electrophoretically resolved TAF components. Nor does the literature provide any suggestion as to which, if any, of the electrophoretically resolved components of the non-TBP fraction provide(s) transcriptional activity, nor means for identifying bands resolvable from the non- TBP fractions. Relevant Literature
Pugh and Tjian ( 1990), Cell 61 : 1 187- 1 197; Tanese et al. (1991), Genes and Devel 5:2212-2224; Pugh and Tjian ( 1991). Genes and Devel 5: 1935-1945;
Dynlacht et al. (1991 ), Cell 66:563-576; Timmers et al. ( 1991), Genes and Devel 5: 1946-1956; Zhou et al. ( 1992), Genes and Devel 6: 1964-1974; and Takada et al. (1992), Proc Nat I Acad Sci USA 89: 1 1809- 1 1813, relate to factors associated with Pol II transcription. Comai et al. ( 1992) Cell 68:965-976 relates to factors associated with Pol I transcription. Lobo et al. (1991), Genes and Devel, 5: 1477- 1489; Margotin et al. ( 1991 ), Science 251 :424-426; Simmen et al. (1991), EMBO J 10: 1853-1862; and Taggart et al. ( 1992), Cell 71 : 1015; Lobo et al. (1992), Cell 71: 1029; and White and Jackson ( 1992), Cell 71 : 1041 relate to factors associated with Pol III transcription. Sekiguchi et al. ( 1988), EMBO J 7: 1683-1687 and Sekiguchi et al. (1991 ), Mol and Cellular Biol 11:3317-3325 disclose the cloning of the CCG1 gene encoding a protein reported to be involved in cell cycle progression.
SUMMARY OF THE INVENTION
Substantially pure and biologically active TATA-binding protein associated factors (TAFs), eukaryotic nuclear proteins involved in RNA polymerase I, II, and III transcription, nucleic acids encoding TAFs, and methods of using TAFs and TAF-encoding nucleic acids are provided. Recombinant TAFs, anti-TAF antibodies and TAF-fusion products find use in drug screening, diagnositcs and therapeutics. In particular, the disclosed TAFs provide valuable reagents in developing specific biochemical assays for screening compounds that agonize or antagonize selected transcription factors involved in regulating gene expression associated with human pathology.
DESCRIPTION OF SPECIFIC EMBODIMENTS
Substantially pure and biologically active TATA-binding protein associated factors (TAFs) and portions thereof, nucleic acids encoding TAFs and portions thereof, and methods of use are provided.
As used herein, a given TAF refers to the TAF protein, recombinant or purified from a natural source, and functional and xenogeneic analogs thereof. For example "dTAFII l 10" refers to a Pol II TAF, deriveable from Drosophila, with an apparent molecular weight of about 1 10 kD. generally as determined by SDS- PAGE under conditions described herein, in Dynlacht et al. ( 1991), Comai et al. (1992), or otherwise identified by functional, sequence, etc. data herein. It is understood that these molecular weight designations are for the convenience of nomenclature and may not necessarily correspond to actual or predicted molecular weight. Other TAFs are analogously identified herein.
A "portion" of a given TAF is a peptide comprising at least about a six, preferably at least about an eighteen, more preferably at least about a thirty-six amino acid sequence of the TAF. Of particular interest are portions of the TAF that facilitate functional or structural interaction with activators, TAFs, TBP, Pol I, II or III, the TATA box and surrounding DNA sequences, etc. Methods for identifying such preferred portions are described below.
By substantially full-length is meant a polypeptide or polynucleotide that comprises at least 50% , preferably at least 70% and more preferably at least 90% of the natural TAF polypeptide or polynucleotide length.
"Xenogeneic" TAF analogs are nonhuman-, nonDrosophila-derived proteins with substantial functional or sequence identity to human and Drosophila TAFs. Of particular interest are xenogeneic TAF analogs derived from rodents, primates, and livestock animals including bovine, ovine, equine and avian species
"Functional" analogs of a given TAF or proteins with "substantial functional identity" to a given TAF are compounds that exhibit one or more biochemical properties specific to such TAF, such as the ability of dTAFIIl 10 to interact with Spl .
"Modulating transcription" means altering transcription, and includes changing the rate of transcription initiation, the level of transcription, or the responsiveness of transcription/transcription initiation to regulatory controls.
The terms "substantially pure" or "isolated" mean that the TAF, TAF portion, or nucleic acid encoding a TAF or TAF portion is unaccompanied by at least some of the material with which it is normally associated in its natural state. While a composition of a substantially pure TAF or portion thereof is preferably substantially free of polyacrylamide. such composition may contain excipients and additives useful in diagnostic, therapeutic and investigative reagents. A substantially pure TAF composition subject to electrophoresis or reverse phase HPLC provides such TAF as a single discernable protemaceous band or peak.
Generally, a substantially pure TAF composition is at least about 1 % protein weight said TAF; preterablv at least about 10%; more preferably at least about 50%; and most preterablv at least 90% . Protein weight percentages are determined by dividing the weight of the TAF or TAF portion, including alternative forms and analogs of the TAF such as proteolytic breakdown products, alternatively spliced, differentially phosphorylated or glycosylated, or otherwise post-translationally modified lorms of the TAF, present in a fraction by the total protein weight present
A biologically active TAF or TAF portion retains one or more of the TAF's native function such as the ability to specifically bind TBP, transcription factors (activators), other TAFs or anti-TAF antibodies, or to modulate or facilitate transcription or transcription initiation. Exemplary assays for biological activity are described below and in the working exemplification.
Specific binding is empirically determined by contacting, for example a TAF, with a mixture of components and identifying those components that preferentially bind the TAF. Specific binding may be conveniently shown by competitive binding studies, lor example, immobilizing a TAF, on a solid matrix such as a polymer bead or microtiter plate and contacting the immobilized TAF with a mixture. Often, one or more components of the mixture will be labelled. Another useful approach is to displace labelled ligand. Generally, specific binding of a TAF will have binding attmitv of 10-6M, preferably 10-8M, more preferably 10-10M under optimized reaction conditions and temperature.
Portions ol TAFs find use in screening TAF expression libraries, defining functional domains of TAFs, identifying compounds that bind or associate with TAFs and the like. Accordingly, peptides encoding a portion of a TAF are provided that are capable of modulating transcription including transcnption initiation. Typically, such peptides are effective by binding to a TAF, an activator, or TBP or competitively inhibiting a TAF domain's association with another compound, typιcally a piotein like TBP or another TAF, an activator, or DNA. For example. TAF-TAF interactions may be exploited to purify TAFs, e.g. immobilized TAF200 is used to purify TAF I 10 Associational domains of TAFs are ascertainable by those skilled in the art using the methods and compositions disclosed herein. Useful methods include in vitro mutagenesis such as deletion mutants, secondary and tertiary structural predictions, antibody and solvent accessibility, etc. For example, peptides derived from highly charged regions find particular use as immunogens and as modulators of TAF-protein interactions. Also. TAF mutants are used to identify regions important for specific protein interactions or otherwise involved in transcription. Here, useful assays include column binding assay and transfection studies.
The invention provides recombinantly produced TAFs, TAF analogs and portions thereof. These recombinant products are readily modified through physical, chemical, and molecular techniques disclosed or cited herein or otherwise known to those skilled in the relevant art. According to a particular embodiment of the invention, portions of the TAF-encoding sequences are spliced with heterologous sequences to produce fusion proteins. Such fusion proteins find particular use in modulating gene transcription in vitro and in vivo.
For example, many eukaryotic sequence-specific transcription factors have separable DNA binding and activation domains. A TAF or domain thereof can be fused to a well-characterized DNA binding domain (see, e.g., Sadowski et al., (1988) Nature 335, 563-564) and the resulting fusion protein can be tested for its ability to modulate transcription or transcriptional initiation. For example, we disclose the fusion of the N-terminal region of TAF110 to the DNA binding domain of the GAL4 protein. Alternatively, an TAF domain can be fused with a domain having endonuclease activity for site-specific DNA cleaving. Other useful TAF fusion partners include GST, Lerner epitope, an epitope recognized by a monoclonal antibody (e.g. hemagglutinin epitope and 12CA5 monoclonal antibody), glutathione S-transferase for immobilization, the SPl or VP16 activation domains, etc.
TAFs can be further modified by methods known in the art. For example, TAFs may be phosphorylated or dephosphorylated, glycosylated or deglycosylated, with or without radioactive labeling, etc. The disclosed TAF serine residues in particular provide useful phosphorylation sites. See e.g. methods disclosed in Roberts et al. ( 1991 ) Science 253. 1022-1026 and in Wegner et al. (1992) Science 256, 370-373. Especially useful are modifications that alter TAF solubility, membrane transportability, stability, and binding specificity and affinity. Some examples include fatty acid-acylation, proteolysis, and mutations in TAF-TAF or TAF-TBP interaction domains that stabilize binding.
TAFs may also be modified with a label capable of providing a detectable signal, for example, at a heart muscle kinase labeling site, either directly or indirectly. Exemplary labels include radioisotopes, fluorescers, etc. Alternatively, a TAF may be expressed in the presence of a labelled amino acid such as 35S- methionine. Such labeled TAFs and analogs thereof find use, for example, as probes in expression screening assays for proteins that interact with TAFs, or, for example, TAF binding to other transcription factors in drug screening assays.
Specific polyclonal or monoclonal antibodies that can distinguish TAFs from other nuclear proteins are conveniently made using the methods and compositions disclosed in Harlow and Lane, Antibodies, A Laboratory Manual, Cold Spring Harbor Laboratory, 1988, other references cited herein, as well as immunological and hybridoma technologies known to those in the art. In particular, TAFs and analogs and portions thereof also find use in raising anti-TAF antibodies in laboratory animals such as mice and rabbits as well as the production of monoclonal antibodies by cell fusion or transformation.
Anti-TAF antibodies and fragments (Fab, etc) thereof find use in modulating TAF involvement in transcription complexes, screening TAF expression libraries, etc. in addition, these antibodies can be used to identify, isolate, and purify structural analogs of TAFs. Anti-TAF antibodies also find use for subcellular localization of TAFs under various conditions such as infection, during various cell cycle phases, induction with cytokines, protein kinases such as C and A, etc. Other exemplary applications include using TAF-specific antibodies (including monoclonal or TAF-derived peptide specific antibodies) to immuno- deplete in vitro tran.scription extracts and using immuno-affmity chromatography to purify TAFs, including analogs, or other nuclear factors which interact with TAFs.
Compositions are also provided for therapeutic intervention in disease, for example, by modifying TAFs or TAF encoding nucleic acids. Oligopeptides can be synthesized in pure form and can find many uses in diagnosis and therapy. These oligopeptides can be used, for example, to modulate native TAF interaction with other TAFs, TBP, other transcription factors or DNA. The oligopeptides will generally be more than six and fewer than about 60 amino acids, more usually fewer than about 30 ammo acids although large oligopeptides may be employed. A TAF or a portion thereol may be used in purified form, generally greater than about 50%, usually greatei than about 90% pure Methods for purifying such peptides to such purities include various forms of chromatographic, chemical, and electrophoretic separations disclosed herein or otherwise known to those skilled in the art.
Experimental methods tor purifying TAFs are set out briefly below and in detail in the following working exemplification. Generally, TBP-TAF complexes are lmmunopurified (generally, by lmmunoprecipitation) using polyclonal or monoclonal antibodies directed against a native TAF or TBP epitope.
Alternatively, monoclonal antibodies directed against an epitope-tagged TBP or TAF may be used. See e.g Zhou, et al. ( 1992). At least three complementary experimental approaches are employed tor isolating cDNAs encoding TAFs: (1) TAF-specific binding proteins (e.g. antibodies directed against TAF proteins, TAF-bmding TAFs. TBP. TAF-bmdmg activators, or TAF-binding coactivators) are used for screening expression libraries; (2) cDNA libraries are screened with potentially homologous TAF oligonucleotide sequences (alternatively, a series of degenerate oligonucleotide PCR primers derived from the homologous TAF sequence may be used to amplily probes from cDNA. See Peterson et al. (1990) Science, 248, 1625-1630, Figurel.), and, (3) TAF proteins are purified to homogeneity for protein microsequencing
TAF ENCODING NUCLEIC ACID
The invention provides nucleic acid sequences encoding TAFs and portions of TAFs. By "encoding a portion of a TAF" is meant to include sequences substantially identical to sequences encoding at least a portion of a TAF. Included are DNA and RNA sequences, sense and antisense.
"Substantial sequence identity" means that a portion of the protein or nucleic acid presents at least about 70%, more preferably at least about 80%, and most preferably at least about 90% sequence identity with a TAF sequence portion. Where the sequence diverges liom native TAF sequences disclosed herein, the differences are preferably conservative, i.e. an acidic for an acidic amino acid substitution or a nucleotide change providing a redundant codon. Dissimilar sequences are typically aggregated within regions rather than being distributed evenly over the polymer.
A substantially identical sequence hybridizes to a complementary TAF- encoding sequence under low stringency conditions, for example, at 50°C and 6X SSC (0.9M saline/0.09M sodium citrate) and that remains bound when subject to washing at 55°C with I X SSC.
The invention's TAF encoding polynucleotides are isolated; meaning that the claimed sequence is present as other than a naturally occurring chromosome or transcript in its natural environment. Typically isolated sequences are removed from at least some of the nucleotide sequences with which they are normally associated with on a natural chromosome.
A substantially pure or isolated TAF- or TAF portion-encoding nucleic acid is generally at least about 1 % nucleic acid weight said TAF-encoding nucleic acid; preferably at least about 10%: more preferably at least about 50%; and most preferably at least 90% . Nucleic acid weight percentages are determined by dividing the weight of the TAF or TAF portion-encoding nucleic acid, including alternative forms and analogs such as alternatively spliced or partially transcribed forms, by the total nucleic acid weight present.
The invention also provides for TAF sequences modified by transitions, transversions, deletions, insertions, or other modifications such as alternative splicing and such alternative forms, genomic TAF sequences, TAF gene flanking sequences, including TAF regulatory sequences and other non-transcribed TAF sequences, TAF mRNA sequences, and RNA and DNA antisense sequences complementary to TAF encoding sequences, equences encoding xenogeneic TAFs. and TAF sequences comprising synthetic nucleotides, e.g., the oxygen of the phosphate group may be replaced with sulfur, methyl, or the like.
For modified TAF-encoding sequences or related sequences encoding proteins with TAF-like functions, there will generally be substantial sequence identity between at least a portion thereof and a portion of a TAF, preferably at least about 40%, more preferably at least 80%, most preferably at least 90%, particularly conservative substitutions, particularly within regulatory regions and regions encoding protein domains involved in protein-protein interactions, particularly TAF-transcripiion factor interactions.
Typically, the invention 's TAF encoding polynucleotides are associated with heterologous sequences, Examples of such heterologous sequences include regulatory sequences such as promoters, enhancers, response elements, signal sequences, polyadenylation sequences, etc. , introns, 5' and 3' noncoding regions, etc. Other useful heterologous sequences are known to those skilled in the art or otherwise disclosed references cited herein. See for example, Russel Doolittle, Of URFs and ORFs, A Primer on How to Analyze Derived Amino Acid Sequences, University Science Books, Mill Valley CA.
TAF encoding nucleic acids can be subject to alternative purification, synthesis, modification or use by methods disclosed herein or otherwise known in the art. For example, the nucleic acids can be modified to alter stability, solubility, binding affinity and specificity, methylation, etc. The nucleic acid sequences of the present invention may also be modified with a label capable of providing a detectable signal, either directly or indirectly. Exemplary labels include radioisotopes, fiuorescers, biotinylation, etc.
Nucleic acids encoding at least a portion of a TAF are used to identify nuclear factors which interact with that TAF using expression screening in yeast as described in Current Protocols in Molecular Biology. In this example, a yeast cDNA library containing fusion genes of cDNA joined with DNA encoding the activation domain of a transcription factor (e.g. Gal4) are transfected with fusion genes encoding a portion of a TAF and the DNA binding domain of a transcription factor. Clones encoding TAF binding proteins provide for the complementation of the transcription factor and are identified through transcription of a reporter gene. See, e.g. Fields and Song ( 1989) Nature 340, 245-246 and Chien et al. (1991) Proc Natl Acad Sci USA 88, 9578-9582.
The invention also provides vectors comprising nucleic acids encoding a TAF or portion or analog thereof. A large number of vectors, including plasmid and viral vectors, have been described for expression in a variety of eukaryotic and prokaryotic hosts. Vectors will often include one or more replication systems for cloning or expression, one or more markers for selection in the host, e.g. antibiotic resistance, and one or more expression cassettes. The inserted TAF coding sequences may be synthesized, isolated from natural sources, prepared as hybrids, etc. Ligation of the coding sequences to the transcriptional regulatory sequences may be achieved by known methods. Advantageously, vectors may also include a promotor operably linked to the TAF encoding portion.
Suitable host cells may be transformed/transfected/infected by any suitable method including electroporation. CaCl2 mediated DNA uptake, viral infection, microinjection, microprojectile. or other established methods. Alternatively, nucleic acids encoding one or more TAFs may be introduced into cells by recombination events. For example, a sequence can be microinjected into a cell, and thereby effect homologous recombination at the site of an endogenous gene encoding a TAF, an analog or pseudogene thereof, or a sequence with substantial identity to a TAF-encoding gene. Other recombination-based methods such as nonhomologous recombinations, deletion of endogenous gene by homologous recombination, especially in pluripotent cells, etc., provide additional applications.
Appropriate host cells include bacteria, archebacteria, fungi, especially yeast, and plant and animal cells, especially mammalian cells. Of particular interest are E. coli, B. subtilis, Saccharomyces cerevisiae, SF9 and SF21 cells, C129 cells, 293 cells, Neurospora, and CHO, COS, HeLa cells and immortalized mammalian myeloid and lymphoid cell lines. Preferred replication systems include M13, ColEl, SV40. baculovirus, vaccinia, lambda, adenovirus, AAV, BPV, etc. A large number of transcription initiation and termination regulatory
elements/ regions have been isolated and shown to be effective in the transcription and translation of heterologous proteins in the various hosts. Examples of these regions, methods of isolation, manner of manipulation, etc. are known in the art. The particular choice of vector/host cell is not critical to the invention.
Under appropriate expression conditions, host cells are used as a source of recombinantly produced TAFs or TAF analogs. Preferred expression systems include E. Coli, vaccinia, or baculovirus; the latter two permitting the recombinant TAFs to be modified, processed and transported within a eukaryotic system.
TAF-encoding oligonucleotides also used to identify other TAFs or transcription factors. For example. 32P-labeled TAF-encoding nucleic acids are used to screen cDNA libraries at low stringency to identify similar cDNAs that encode proteins with TAF -related domains. Additionally, TAF related proteins are isolated by PCR amplification with degenerate oligonucleotide probes using the sequences disclosed herein. Other experimental methods for cloning TAFs, sequencing DNA encoding TAFs. and expressing recombinant TAFs are also set out in the working exempli fication below. Other useful cloning, expression, and genetic manipulation techniques for practicing the inventions disclosed herein are known to those skilled in the art.
The compositions and methods disclosed herein may be used to effect gene therapy. See, e.g. Gutierrez et al. ( 1992) Lancet 339, 715-721. For example, cells are transfected with TAF sequences operably linked to gene regulatory sequences capable of effecting altered TAF expression or regulation. To modulate TAF translation, cells may be transfected with TAF complementary antisense polynucleotides.
Antisense modulation may employ TAF antisense sequences operably linked to gene regulatory sequences. Cells are transfected with a vector comprising a TAF sequence with a promoter sequence oriented such that transcription of the gene yields an antisense transcript capable of binding to TAF encoding mRNA. Transcription may be constitutive or inducible and the vector may provide for stable extrachromosomal maintenance or integration. Alternatively, single-stranded antisense nucleic acid sequences that bind to genomic DNA or mRNA encoding at least a portion of TAF may be administered to the target cell at a concentration that results in a substantial reduction in TAF expression.
ASSAYS FOR IDENTIFYING TRANSCRIPTION FACTORS AND THERAPEUTIC AGENTS
The invention provides methods and compositions for identifying agents useful in modulating gene transcription. Such agents find use in the diagnosis or treatment of broad range of disease including cancer, cardiovascular diseases, microbial and fungal infections and particularly viral infections, inflammatory disease, immune disease, etc. The ability to develop rapid and convenient high- throughput biochemical assays for screening compounds that interfere with the process of transcription in human cells opens a new avenue for drug development. An overview of this therapeuitic approach is presented in Peterson & Baichwal (1993), Trends in Biotechnology, in press. Typically, prospective agents are screened from large libraries of synthetic or natural compounds. For example, numerous means are available for random and directed synthesis of saccharide. pepnde. and nucleic acid based compounds, see, e.g. Lam et al., ( 1991 ) Nature 354, 82-86. Alternatively, libraries of natural compounds in the form ot bacterial, fungal, plant and animal extracts are available or readily predicable. Additionally, natural and synthetically produced libraries and compounds are readily modified through conventional chemical, physical, and biochemical means. Examples of such modifications are disclosed herein.
Useful agents are identified with a range of assays employing TAFs or TAF encoding nucleic acids. As examples, protein binding assays, nucleic acid binding assays and gel shift assays arc useful approaches. Exemplary assays include assaying labeled TBP binding to immobilized TAF, labeled TAF or TAF peptide binding immobilized TBP, etc. Many appropriate assays are amenable to scaled- up, high throughput usage suitable for volume drug screening. Such screening will typically require the screening ol at least about 10, preferably at least about 100, and more preferably at least about 1000 prospective agents per week. The particular assay used will be determined by the particular nature of the TAF interactions. For instance, a prospective agent may modify with the function of a TAF but not with transcription complex assembly. For example, a molecule that binds to a TAF but does not disrupt complex assembly is identified more readily through labelled binding assays than through gel retardation assay. Assays may employ single TAFS. TAF portions. TAF fusion products, partial TAF complexes, or the complete TFIID transcription complex, depending on the associational requirements of the suiηect transcription factor.
Useful agents are typically those that bind to or modify the association of transcription associated tactors. especially TAFs. Preferred agents include those capable of modulating the expression of Pol II genes, particulary oncogenes (including viral oncogenes such as adenovirus EIA, human papilloma E7, and cellular oncogenes such as Rb, P53. E2F, myc, fos/jun (API), abl, etc.), genes transcribed during viral infection or activation, and sterol regulated genes.
Preferered agents modify, preferably disrupt. TAF-TAF, TAF-activator, TAF- coactivator (coactivators include OCA-B. dTAFIII 10, etc.) or TAF-TBP binding. An especially preferred useful agent disrupts the association of a disclosed hTAF, with an activator, particularly a viral-specific activator, particularly an HIV- specific activator such as tat.
Useful agents are found within numerous chemical classes, though typically they are organic compounds; preferably small organic compounds. Small organic compounds have a molecular weight of more than 50 yet less than about 2,500, preferably less than about 750. more preferably, less than about 250. Exemplary classes include peptides, saccharides, steroids, and the like.
Selected agents may be modified to enhance efficacy, stability,
pharmaceutical compatibility, and the like. Structural identification of an agent may be used to identify, generate, or screen additional agents. For example, where peptide agents are identified, they may be modified in a variety of ways to enhance their stability, such as using an unnatural amino acid, such as a D-amino acid, particularly D-alanine. by lunctionalizing the amino or carboxyl terminus, e.g., for the amino group, acylation or alkylation, and for the carboxyl group, esterification or amidification. or the like. Other methods of stabilization may include encapsulation, for example, in liposomes, etc.
Agents may be prepared in a variety of ways known to those skilled in the art. For example, peptides under about 60 amino acids can be readily synthesized today using conventional commercially available automatic synthesizers.
Alternatively, peptide (and protein and nucleic acid agents) are readily produced by known recombinant technologies.
For therapeutic uses, the compositions and selected agents disclosed herein may be administered by any convenient way that will depend upon the nature of the compound. For small molecular weight agents, oral administration is preferred and enteric coatings may be iiulicated where the compound is not expected to retain activity after exposure to the stomach environment. Generally the amount administered will be empirically determined, typically in the range of about 1 to 1000 ug/kg of recipient.
Large proteins are preferably administered parenterally, conveniently in a physiologically acceptable carrier, e.g., phosphate buffered saline, saline, deionized water, or the like. Typically, such compositions are added to a retained physiological fluid such as blood or synovial fluid. Generally, the amount administered will be empirically determined, typically in the range of about 10 to 1000 μg/kg of the recipient. Other additives may be included, such as stabilizers, bactericides, etc. These additives will be present in conventional amounts.
The following examples are offered by way of illustration and not by way of limitation.
EXAMPLES
Additional exemplary materials and methods for the purification, cloning and expression of TAFs are described below. Additional exemplary functional assays are described in detail. While exemplified primarily for dTAFIIl 10, the disclosed methods find ready application to other TAFs by those skilled in the art and familiar with the methods hereinor found in standard manuals such as
Molecular Cloning, A Laboratory Manual (2nd Ed., Sambrook, Fritsch and Maniatis, Cold Spring Harbor), Current Protocols in Molecular Biology (Eds. Ausubel, Brent, Kingston. Moore, Seidman, Smith and Struhl, Greene Publ.
Assoc, Wiley-Interscicnce. NY. NY, 1992)
Immunopurified dTFIID complex is necessary and sufficient to mediate Spl activation in vitro.
In order to determine if the TFIID complex is sufficient to substitute for a partially-purified TFIID fraction, we have purified the TBP-TAF complex extensively by using an affinity resin coupled to a specific monoclonal antibody directed against TBP. Transcriptionally active TFIID purified from Drosophila embryos was obtained by eluting the complex from the antibody affinity resin with a low concentration (0.5 M) of guanidine hydrochloride in the presence of a synthetic peptide corresponding to the epitope recognized by monoclonal 42A11. The antibody used for the immunopurification remained bound to the protein G- sepharose beads and was found in the pellet. The proteins were electrophoresed on an 8 % polyacrylamide-SDS gel and detected by silver staining. The resultant gels reveal seven major TAFs in the complex ranging in size from 30 to over 200 kD.
After dialysis of the purified TFIID complex to remove the peptide and denaturant, in vitro transcription reactions were carried out in the presence of basal factors that were isolated from Drosophila embryo nuclear extracts (Dynlacht et al., 1991 ; Wampler et al. , 1990). Without the TFIID fraction there is no detectable transcription Purified, recombinant dTBP is able to direct basal but not activated transcription. In contrast, immunopurified TFIID complex is able to mediate basal expression and Spl activation Spl-dependent activation with the TFIID fraction is shown m lanes 7 and 8. For the in vitro transcription assay, 2 ul of the immunopurif ied TFIID complex was assayed. Transcription was assayed by primer extension. The results demonstrate that the immunopurified TFIID complex containing TBP and at least 7 specific TAFs is necessary and sufficient for Spl- dependent activation of transcription in vitro. As expected, the impure TFIID fraction also mediates transcriptional activation by Spl , while the recombinant TBP protein is only able to direct basal, but not activated transcription. The immunopurified complex is also able to support activation by other transcription factors such as NTF- 1.
Cloning and expression ot Drosophila TAFl 10 cDNAs
Purified TFIID complex was used to immunize a mouse, and monoclonal antibodies were generated against TAF110 (see Experimental Procedures below). The serum from the immunized mouse was also collected and polyclonal antibodies used to screen a λgt 11 expression library constructed from Drosophila embryo cDNA (Zinn et al., 1988) One clone was tentatively classified as a TAF110 cDNA because it produced protein that cross-reacted with independently isolated anti-TAF 110 monoclonal antibodies. This partial cDNA clone was subsequently used as a probe to isolate hill-length cDNAs from a λgtlO library (Poole et al.,1985). The longest clone obtained was 4.6 kb. This cDNA is polyadenylated at the 3' end and appears to be nearly full-length, based on the size of the mRNA, as determined by Northern blot analysis. The 4.6 kb cDNA clone contains a long open reading frame coding tor a protein of 921 amino acids (SEQUENCE ID NO: 1), with a calculated molecular weight of 99.4 kD and an estimated pi of 10.1. Within the predicted ammo acid sequence, there are 3 peptides That correspond to ammo acid sequences determined Irom lys C peptides generated from HPLC purified TAF110. For miciosequencing. the TFIID complex was immunopurified from fractionated embrvo nuclear extract, and the TAFs were separated from TBP and the antibody by elution with 1 M guanidine-HCl. The purified TAFs were fracuonated on a C4 reverse phase HPLC column. Three adjacent fractions containing TAF l 10 as the major species were cleaved with the protease lys-C, and the resulting peptides were purified and sequenced. Three peptide sequences were found that match the predicted amino acid sequence of the TAF110 cDNA
We have expressed TAF 1 10 protein in a variety of cell types. The protein was expressed from the cloned gene in a baculovirus expression system and detected by western blot using a TAF110 monoclonal antibody. The protein encoded by the TAF110 cDNA has the same apparent molecular weight as the endogenous protein in the TFIID fraction derived from Drosophila cells, and the protein produced from the cloned gene cross-reacts with monoclonal antibodies directed against the TAF110 protein isolated from embryos. These results taken together demonstrate that the 4.6 kb cDNA encodes the full-length TAF110 protein.
TAFl 10 appears to be a single copy gene in Drosophila based on low- stringency Southern blot analysis. The TAF110 gene is located at 72D,4-5 on the left arm of the third chromosome. There are not any previously identified Drosophila genes assigned to this chromosomal location (Lindsley and Zimm, 1992).
Hybridomas producing antibodies against TAF110 were selected by screening cell culture supematants for those containing antibodies that specifically recognize the l 10 kd protein in a western blot. For westerns, approximately 50 ug of the TFIID fraction was immunoprecipitated with antibodies against dTBP or TAFl 10. The α-TAFI 10 monoclonal antibody 33G8 was obtained from a hybridoma culture medium and purified by binding to protein G-sepharose.
Proteins were eluted from the resin by boiling in sample buffer, electrophoresed on 8% polyacrylamide gel. and silver stained. Several of the a-TAF110 monoclonals that were obtained by this method specifically immunoprecipitate the same set of proteins as a-dTBP antibodies. This demonstrates that at least part of TAF110 is accessible to our antibodies, and therefore exposed in the native TFIID complex and positioned for interaction with activators.
Monoclonal antibodies specific for other Drosophila TAFs can also immunopurify the same TFIID complex as a-TBP and α-TAFFII0 antibodies.
Thus, there appears to be one predominant TBP-containing complex in the TFIID fraction, as opposed to a heterogeneous set of complexes containing different sets of TAFs bound to TBP. Our methods are also used to determine if there are rare, perhaps tissue-specific. TBP-containing complexes that might contain different collections of TAFs or if the activity of the TAFs could be modulated by post- translational modifications. For example, TAF200 does not stain as intensely as the other TAFs and TBP. and. on this basis, might not be present in all complexes. However, this protein seems to be an authentic member of the major TFIID complex since antibodies directed against TAF200 immunopurify a set of proteins that appear to be identical to complexes purified by antibodies directed against TBP or other TAFs. The preparations of the purified TFIID complex contain some polypeptides that are less abundant than the major TAF proteins. Based on western analyses with α-TAF antibodies, these minor species appear to be proteolytic breakdown products of larger TAFs or substoichiometric TAFs.
The TAF110 coding sequence contains several regions which are rich in glutamine residues or rich in serine and threonine residues, and the C-terminal third of the protein is highly charged. The C-terminal region of the molecule contains 32% acidic or basic residues. We searched the existing data bases for genes similar to the TAF110 gene, and found that it is not highly homologous to any previously identified genes. In particular, TAF110 did not show any similarity to any DNA binding domains. Interestingly, Spl received one of the highest scores in the NBRF protein sequence data base search for similarity to TAF110. The amino terminal third of TAF110 has an organization similar to the activation domains of Spl , consisting of glutamine-rich regions flanked by serine-threonine rich domains. The two proteins share 21 % amino acid identity and 35% similarity over 260 residues.
This unexpected similarity to Spl prompted us to consider a possible functional relationship between Spl and TAF110. In particular, whether the amino-terminal region of TAF110 might contain interaction surfaces for activators such as Spl , especially since the A and B glutamine-rich domains are responsible for mediating Spl -Spl interactions as well as activation. Indeed, one of the unique properties of Spl activation domains is their capacity to mediate a phenomenon called superactivation. in which a truncated form of Spl lacking the zinc fingers but containing glutamine-rich domains A and B is able to interact directly with DNA-bound full length Spl. This interaction increases the number of activation domains at the promoter and can greatly enhance expression of a gene regulated by Spl binding sites. This type of interaction also appears to be involved in synergistic activation mediated by distaliy and proximally bound Spl . ?dTAF110 can function as a target for the Spl activation domains
To test for functional homology between the similar domains, we asked if the N-terminal region of TAF110 could function as a target for the Spl activation domains in a superactivation assay. The amino terminal 308 residues of TAF110 were fused to the DNA binding domain of the GAL4 protein, G4(1-147), and tested in a transient cotransfection assay in Drosophila Schneider cells. This hybrid construct, by itself, weakly activates (4 fold) a reporter gene which is dependent on GAL4 binding sites. This low level of activity is similar to the modest activation observed with constructs containing the Spl B domain fused to GAL4. When this TAF110 hybrid construct is cotransfected with DNA expressing the gin-rich A and B domains of Spl, (N539), a 60 fold increase in transcription is observed. This 15 fold superactivation is dependent on the TAF110 sequences since Spl(N539) is unable to stimulate transcription when cotransfected with G4(1- 147) alone. The interaction with Spl apparently requires an extended region of TAF110 since GAL4 fusion proteins bearing TAF110 residues 1-137, 138-308, or 87-308 are unable to mediate superactivation by Spl .
These results indicate that the N-terminal 308 amino acids of TAF110 are sufficient for mediating an interaction with the glutamine-rich activation domains of Spl that lead to superactivation. In the positive control for this experiment, a GAL4-SplB domain fusion is superactivated approximately 50 fold by the fingerless Spl mutant. In a search for other potential targets of Spl, we have tested some additional members of the TFIID complex for the ability to mediate superactivation by Spl . For example. GAL4 hybrids containing TAF40, TAF80, or the amino-terminal region of dTBP were found to be inactive in the
superactivation assay. This results shows that the interaction between TAF110 and Spl in Drosophila cells is quite specific and that other subunits of the TBP-TAF complex that we tested are unable to interact with the glutamine-rich activation domains of Spl . dTAFHO and Spl interact in yeast
The superactivation assay in Drosophila Schneider cells provided the first hint that TAF110 mav serve as a eoactivator tor Spl. However, it is difficult to assess in this assay whether TAF110 can interact with Spl in the absence of the other TAFs which are present in Drosophila cells. The superactivation assay also imposes certain limitations to the number and types of constructs that can be tested. Moreover, it seemed prudent to establish several independent assays to investigate the relationship between TAF110 and transcription activation domains. Therefore, we earned out two additional types of assays, one in vivo and one in vitro, to test the results obtained in Schneider cells First, we tested the ability of TAF110 and Spl to interact in a versatιie assay lor protein-protein interaction which is earned out in yeast cells (Fields and Song. 1989). This strategy takes advantage of the modular organization ol eukaryotic transcription factors. In this assay, one of the partners to be tested is fused to the DNA binding domain of GAL4 and, in a separate molecule, the other partner is fused to the acidic activation domain
(AAD). A functional activation domain is recruited to the target promoter bearing GAL4 binding sites and the lacZ reporter gene is expressed only if there is a protein-protein interaction between the partners being tested.
Full-length TAF110 as well as a variety of deletion mutants were fused to the DNA binding domain of GAE4, G4( 1 - 147). In contrast to the situation in Drosophila cells, the ammo terminal region of TAF110 cannot activate
transcription by itself in yeast This result was anticipated since glutamme-rich activation domains have not been observed to function in yeast. As potential partners for TAF110, the Spl activation domains were fused to the acidic activation domain ol GAE4. Each ol the Spl glutamine-rich activation domains A or B can independently interact with tull-length TAF110 as judged by activation of the reporter gene. In these experiments, yeast bearing an integrated GALl:lacZ fusion were transformed w ith two plasmids: ( 1 ) fusions to the DNA binding domain of GAL4 (residues 1 - 147), and (2) fusions to the acidic activation domain (AAD; residues 768-88 l ol GAL4), and the resulting /3-gal activity was measured (expressed in units/ mg of protein). Interestingly, domain A of Spl appears to interact more el ficientlv than domain B, and this correlates well with the previous finding that A is a better activator tor transcription than domain B (Courey and Tjian, 1988). As in Drosophila cells, residues 1-308 of TAF110 are sufficient for the interaction, while regions 1- 137 and 138-308 are inactive. The full-length TAFl 10 fusion is more active than the N308 construct in this assay. Although this effect may be due to dil lerential protein expression, it is possible that the C- terminal regions ol TAF110 contribute to interactions with Spl . The protein- protein interaction assay in yeast further supports the idea that TAF110 interacts, directly or indirectly, with the activation domains of Spl , and the strength of this interaction appears to be correlated with transcriptional function.
The other TAF proteins that have been tested in the superactivation assay or the yeast assay displayed no delectable interaction with Spl . However, the GAL4 fusion proteins that these assays rely on might not be able to participate in all the correct interactions because some surfaces could be sterically blocked. Therefore, additional strategies, such as the use of full length Spl, are used to test for other potential interactions. dTAF110 does not interact with other activators tested
To determine whether the interaction between Spl and TAF110 is specific, or whether other types of activators also interact with TAF110, we used the yeast assay to test a variety of other activation domains including the acidic activation domain of GAL4 (Ma and Ptashne, 1987) and the proline-rich activation domain of CTF (Mermod et al. 1989). Neither of these two activators displayed any interaction with TAF110 m the yeast assay. In addition we tested activation domains from the Drosophila proteins Antennapedia (Antp) and bicoid (bed), both of which are glutamine-rich. Surprisingly, both of these glutamine-rich domains failed to interact with TAF110 in the yeast assay. Since TAF110 can interact with both Spl domains A and B. which have no significant homology other than high glutamine content, but not Antp and bed which are even more glutamine-rich than Spl, it appears that glutamine content alone may not be a sufficient criterion for the classification of functionally similar activation domains. In this regard, it may be useful to draw a distinction between the Spl activation domains, which are approximately 25% glutamine and flanked by serine/threonine rich sequences, and the bed and Antp sequences, which are partially composed of uninterrupted stretches of glutamines and lack adjacent serine/threonine sequences. The N-terminal region of TAF110, containing the glutamine-and serine/threonine-rich sequences, is able to function as a weak activation domain in Drosophila cells, suggesting that this region can interact with a component of the native TFIID complex To determine whether the N-terminal region of TAF110 is similar to the Spl actu ation domains which can mediate muitimerization, we tested for TAF110-TAF110 interactions We found that the N-terminal region of TAF110 is able to interact with itsell as judged bv activation of the lacZ reporter gene in the yeast assay (figure 6A) This is another example of functional similanty between the Spl activation domains and the N-terminal region of TAF110, which can interact with each other as well themselves
TBP and other TAFs tested do not interact with Spl in yeast
Since Spl synergistically activates transcription through multiple sites even though it does not bind cooperatively to DNA, we sought to determine whether Spl works via interactions w ith multiple targets or coactivators. We therefore tested two other members ot the TFIID complex, TAF40 and TAF80. Similar to the superactivation assay in Drosophila cells, neither TAF40 or TAF80 displayed any ability to interact w ith Spl under the conditions of the yeast assay. In addition, the conserved C-termmal domain of TBP was tested for Spl interaction in yeast but no interaction was observed. We were unable to test full-length dTBP in this assay because it f unctions as an activator in yeast when fused to the GAL4 DNA binding domain These icsults show that the interaction between TAF110 and Spl is quite speci l ic. and that FAF80, TAF40, and the conserved region of TBP do not appear to be tai gets tor Spl
Since the TFIID complex is also required at promoters that lack a TATA box, one ot the TA1 s might be required tor promoter recognition through the initiator element. In addition to communicating with promoter-selective factors, the TAFs interact with each other, at least one TAF interacts with TBP, and one interacts with RNA polymei ase II or one ot the basal factors.
Spl binds dTAF110 in vitro
The superactiv ation assay m Schneider cells and the yeast experiments are both indirect assays lot piotem-protem interactions. Therefore, we also determined the ability ol Spl to bind directly to TAF110 in vitro. Biotinylated ohgonucleotides containing Spl binding sites were coupled to streptavidin-agarose resin. The resin was incubated w ith Spl that had been over-expressed and purified from HeLa cells intected with a vaccinia virus expression vector (Jackson et al., 1990). After allowing Spl to bind DNA on the beads, the unbound Spl was washed away. Control resin that lacked Spl was also prepared and tested in parallel. These resins were incubated in batch with 35S-labeled TAF110 synthesized in vitro in a reticulocyte lysate After incubation with the labeled protein, the beads were extensively washed and the bound proteins were eluted in two steps with buffer containing 0.2 M KCl foliowed by 1.0 M KCl. The 1.0 M salt incubation elutes Spl from the DNA The input, unbound supernatant, and eluted fractions were subsequently analyzed by SDS-PAGE and autoradiography. Samples from the binding reaction were also analyzed by silver staining to detect non-specific binding of proteins present in the reticulocyte lysate.
35S-labeled TAF110 synthesized in vitro in a reticulocyte lysate and incubated with streptavidin-agarose beads with or without DNA-bound Spl .
Protein fractions were run on SDS-PAGE and analyzed by autoradiography or by silver staining. After allowing TAF110 to bind Spl , the beads were pelleted and the supernatant containing the unbound proteins was collected. The resin was washed 4 time. The specifically bound proteins were eluted by incubating the beads in buffer containing 0.2 M KCl. followed by 1.0 M KCl. The Spl protein bound to the DNA is eluted by treatment w ith 1 .0 M salt. Labeled TAF110 protein is detectable in the eluted tractions No detectable TAF110 protein bound to the DNA affinity resm in the absence ol Spl protein. Quantitation of these results by analysis of the gel in a Phosphorlmager (Molecular Dynamics) indicate a 60-fold greater binding by labeled TAF110 to the Spl-containing resin. The silver stained gel showed that Spl is the major species in the eluate indicating that the unlabeled proteins m the extract are not able to bind Spl.
These data show that TAF110 is selectively retained on the resm containing DNA-bound Spl. but TAF110 does not bind the control resin that lacks Spl . Most of the bound TAF110 elutes with the Spl at 1.0 M KCl with a lower amount eluting at 0.2 M KCl. Analysis of the tractions by silver staining indicates that Spl is the ma)or protein detectable in the high salt eluate, indicating that the unlabeled proteins present the reticulocyte lysate. which constitute the vast majority of the total protein in the input, are not non-specifically binding to Spl in this assay. To rule out the possibility that an intermediary protein, perhaps some other TAF or other eukaryotic protein, was required for the Spl-TAF110 interaction, this experiment was repeated using 35S-labeled TAF110 synthesized in an in vitro transcription/translation extract derived from E. coli (Skelly et al., 1987). The TAFl 10 protein synthesized in the prokaryotic system was also specifically retained on the Spl affinity resin providing further evidence that Spl can bind directly to TAF110.
As an additional test of specificity, we also determined if deletion mutants of TAF110 could bind to Spl in this in vitro assay (mutants are expressed from the N-terminal). A 1 - 137 mutant was not able to bind Spl in vitro, while some binding was obtained w ith a 1 -308 mutant. Mutants of 308-921 , 447-921 , and 571-921 were all effective m binding Spl , while C-termina deletions beyond 852 from these mutants eliminated Spl binding. These results indicate the importance of a 852-921 region and a 137-308 region of TAF110 in transcription activator interaction. TAF110 does not directly bind TBP
Our experiments indicate that TAF110 cannot directly bind to TBP by itself and that at least one additional TAF is required to connect TAF110 and TBP. For example, α-TAF110 antibodies fail to coprecipitate both in vitro expressed TAFl 10 and TBP and similarly with α-TBP antibody. Exemplary Experimental Procedures
Purification of the TFIID complex
For the in vitro transcription assay, the TFIID complex was
immunopurified from the partially purified TFIID fraction (Q-sepharose fraction, 0.3 M KCl eluate) (Dynlacht et al . , 1991 ) using the α-dTBP monoclonal antibody 42A11 coupled to protein G-sepharosc (Pharmacia). The immunoprecipitates were washed with 0. 1 M KCI-HEMG-ND buffer (25 mM HEPES pH 7.6, 0.1 mM EDTA, 12.5 mM MgCl2. 10% glvcerol, 0. 1 % NP-40. 0. 1 mM DTT) and the TFIID complex was eluted from the antibody by addition 10 mg/ml of the peptide mimicking the epitope of 42A 1 1 (sequence: NH2-RPSTPMTPATPGSADPG- COOH) in HEMG buffer containing 0.5 M guanidine-HCl. The eluate was dialyzed against 0. 1 M KCI-HEMG-ND. and then assayed for transcription activity.
Purification of dTAF 1 10
Nuclear extracts derived from approximately 1 kg of Drosophila embryos were prepared and fractionated as previously described (Dynlacht et al., 1991; Wampler et al., 1990). For protein sequencing, the TFIID complex was purified with polyclonal α-dTBP antibodies as previously described (Dynlacht et al., 1991) or with a monoclonal antibody as described above. The TAFs were separated from TBP by elution of the protein A-antibody resin with 0. 1 M KCl-HEMG buffer containing 1.5 mM DTT. 0. 1 % LDAO (lauryl dimethylamineox.de), and 1M Gd- HCl. The TAFs were eluted by batch incubation of the resin with an equal volume of buffer for 25 min at 4 °C. This procedure was repeated and the two supematants were combined. Urea was added to 8 M, DTT to 10 mM, and cysteines were modified with 4-vinylpyridine.
Two approaches were used to separate the TAFs: HPLC and PAGE.
Under the HPLC approach, the TAFs were fractionated by reverse phase HPLC on a 300 angstrom C4 column (2. 1 X 30 mm). The proteins were eluted with a gradient from 20-70% buffer B (buffer A = 0. 1 % TFA, 1 % n-propanol; buffer B = 0.1 % TFA, 1 % n-propanol. 60% isopropanol, 30% acetonitrile). TAF110 consistently eluted at 35 % buffer B. Fractions containing TAF110 (approximately 5 μg) were lyophilized. resuspended in 100 mM TRIS, pH 8.0, and 2 M urea, and incubated at 55 °C for 10 min. 150 ng of the protease lys C was added and the protein was digested for 20 hr at 37 °C. Peptides were chromatographed and sequenced as previously described (Williams et al., 1988).
Under the gel electrophoresis approach, the TAFs were separated by electrophoesis and transferred to membranes. The separated TAFs were digested with LysC or trypsin and the resultant peptides eluted, chromatographed and sequenced. See Fernandez et al. , ( 1992) Analytical Biochemistry 201 , 255-264. In vitro transcription assay
Transcription factor tractions were reconstituted with basal factor fractions derived from 0- 12 hr Dr osoplula embryo nuclear extracts essentially as previously described (Dynlacht et al. , 1991 ) except that TFIIB was separated from
TFIIE/TFIIF and pol I I w as tractionaied further on a phosphocellulose column. Each reaction contained 0.5 ug ot the TFIIB fraction (S-sepharose 0.5 M eluate), 1.5 ug of the TFIIE/TFI I F fraction (S-sepharose 0.25 M eluate), and 0.25 mg of the pol II fraction (phosphocellulose 0.4 M eluate). Some reactions contained 1.5 ug of the TFIID traction or 2 ng of purified, recombinant dTBP that had been expressed in E. coli ( Hoev et al. , 1990). The template for the in vitro transcnption reaction was BCAT (Eillie and Green, 1989) containing 3 Spl binding sites, and transcription was assayed by primer extension.
Generation of antibodies against the TAFs
Immunopurified TFIID complex (approximately 10 ug/ injection) was mixed with Ribi's adμivant and iniected mtraperitoneally into a Swiss-Webster mouse at days 0, 7, and 2 1. The initial immune response was monitored at day 28 and boosted further by two biweekly injections of more antigen. After an intravenous injection ot one further dose of antigen the spleen was dissected out and electrofuscd with myeloma cells. Approximately 600 supematants from 96-well dishes (each well containing on average 5 independent hybridomas) were assayed on western strip blots lor cross-reactivity with immunopurified TFIID complex proteins. Hybridomas f rom w ells producing anti-TAF and/or anti-TBP antibodies were cloned by limited dilution and tested by Western blotting and
immunoprecipitation assays.
Cloning of TAF110 cDNAs
The polyclonal antiserum obtained from the immunization scheme described above was used at a 1 / 1000 dilution to screen approximately 5 x 105 plaques of a size-selected ( > 1.8 kb) 9 - 12hr Igt I I Drosophila cDNA library (Zinn et al. , 1988). Positive clones w ei e placiue-purilied to homogeneity and tested for cross- reactivity against anti-TAF monoclonal antibodies of known specificity. One clone, λ106, cross-reacted strongly w ith several independent anti-TAFHO hybridomas. Insert DNA (2.6 kb) from λ 106 was purified and labeled using Klenow polymerase and random hexamer priming (Amersham). 106 recombinant phage from a cDNA library ( Poole. et al ., 1985) prepared from 3-9 hour Drosophila embryos were screened as pieviouslv described ( Kadonaga et al. , 1987). 24 positives were obtained in duplicate on the primary screen; 12 of these were randomly selected tor rescreening, and 10 ot 12 were positive on the secondary screen. All 10 of these cDNA clones were found to be related to each other on the basis of restriction mapping and cross-hybridization. The largest cDNA clone of 4.6 kb, λ110-5, was completely sequenced, and two other clones of 3. 1 kb, λ110- 1, and 2. 1 kb. λ110-2. were partially sequenced. The inserts were subcloned into pBS-SK (Stratagene) in both orientations, a nested set of deletions was constructed with exonuclease IlI, and the clones were sequenced by the dideoxy method. The λ110- 1 clone was found to be 37 nucleotides longer at the 5' end than the λ110-5 clone and missing 1.5 kb on the 3' end. The SEQUENCE ID NO: 1 is a composite of the λ 110- 1 and λ 110-5 sequence.
Expression of dTAF110 protein
An Ndel site w as created at the initiating methionine using a PCR based strategy. A 3. 1 kb Ndel-BssHII fragment containing the entire coding sequence was subcloned into the Smal site of the baculovirus expression vector pVL1392 (Pharmingen). Recombinant baculoviruses were selected by co-transfection of Sf9 cells with the expression vector and linear viral DNA as described by the supplier (Pharmingen). Samples lor the w estern blot were prepared by infecting SF9 cells with recombmant virus obtained I rom the transfection supernatant. Three days after infection the cells w eie harvested, washed, resuspended in HEMG buffer, and lysed by somcation. I he pi otein concentration was measured by Bradford assay. After electrophoresis proteins were transferred to nitrocellulose: TAF110 protein was detected using the monoclonal antibody 3E7. Transfections
Transfection of Schneider cells (line SL2) was carried out as previously described (Courev and Tpan. 1988) except that the transfections were performed in 60 mm dishes. The expression vector tor all proteins used in this study was pPac, which contains the Drosophila actin 5c promoter. TAF110 sequences were fused in frame to GAL4 DNA binding domain, residues 1- 147. The following restriction fragments of the TAF110 cDNA were used: N 137. Ndel-Clal; N308. Ndel-Sall, 138-308, Clal-Sall; 87-308. Hincll . The constructs were checked by sequencing across the fusion junctions. The amounts of DNA used were as follows: 100 ng of the pPacGAL4 derivatives. 500 ng of the pPacSpl N539, and 2.5 ug of the reporter gene pG5BCAT (Lillie and Green. 1989). CAT assays were performed and quantitated as previously described (Courey and Tjian, 1988). Yeast Methods
The yeast strain Y 153 (a. gal4, gal80, his3, trpl-901 , ade2-101 , ura3-52, leu2-3, 1 12, URA3: : Gall:lacZ. LYS2: :Gal-His3) was transformed with two plasmids according to the method of Shiest! and Gietz (Schiestl and Gietz, 1989). The Gal4 DNA binding domain hybrids were constructed in the vector pAS 1. pASl is a 2μ plasmid with TI .P selection that expresses fusions to Gal4(1-147) from the ADH promoter. For expression of GAL4( 1- 147), an Xbal linker containing stop codons in all three reading frames was inserted in pASl immediately downstream of the GAL4( 1 - 147) coding sequence. G4-1 10 (fl) contains the entire coding region of the TAF l 10 on an Ndel-BssHII fragment, and the shorter G4- 1 10 fusions contain fragments as described for the Drosophila expression vectors. G4-80 (fI) contains an Ndel-Xbal fragment that includes the entire coding region of Drosophila TAF80. G4-40 (fl) contains an Ndel-EcoRV fragment encoding Drosophila TAF40. G4-dTBP( 191 C) contains an Ndel fragment derived from pAR- 191 C containing the conserved C-terminal domain (Hoey et al., 1990). The reading frame across all fusion junctions was verified by sequencing, and the protein expression was verified by western blot analyses with either α-TAF or α -GAI .4 antibodies, with the exception of G4- 1 10(N137).
The acidic activation domain fusions were constructed in the vectors pGADlF, pGAD2F or pGAD3F which differ only in the reading frame of a unique Bam site (Chien et al.. 1991 ). These 2μ plasmids with LEU2 selection express fusions to activating region I I ( residues 768-881 ) of GAL4 from the ADH promoter. Spl region A consists of amino acids 83-262 and Spl region B consists of residues 263-542: these were cloned as BamHI-Bglll fragments from the plasmids pKSABg 10 and pKSBG lespectively The C-terminal 100 amino acids of CTFl (residues 399-449) were cloned as a Bglll-EcoRI fragment (Mermod et al. , 1989). The Antp construct w as made by subcloning a Bam HI fragment containing the activation domain (Courev et al , 1989) Bed residues 249-489 (Driever et al. , 1989) were cloned on a Sall fragment derived from pPac-bcd. The reading frame across all fusion junctions w as veri fied by sequencing.
Transformed yeast w eie assayed qualitatively after growth on media containing X-gal. Quantitative β-galactosidase assays were performed as described (Himmelfarb et al. , 1990) except cells were grown to mid log in selective media containing 2 % glucose Assays w ere performed in triplicate and activity is expressed as units/mg of total protein
In vitro protein-protein interaction assay
A 3. 1 kb Ndel-BssHll fragment containing the entire TAF110 coding region was subcloned into the plasmid pTbSTOP (Jantzen et al. , 1992), which contains the b-globin untranslated leader downstream of a T7 promoter. The plasmid was linearized with Xbal, and the gene was transcribed in vitro with T7 RNA polymerase. Αinet labeled protein was synthesized in vitro in a rabbit reticulocyte lysate (Promega) Alternatively, TAF110 was synthesized in vitro in an E. coli derived S30 transcription/translation extract (Skelly et al. , 1987). Spl protein was ovcrexpressed in HeLa cells using a vaccinia virus expression vector (Jackson et al. , 1990) and puri f ied by wheat germ agglutinin (WGA) affinity chromatography ( Jackson and Tjian 1990), prior to DNA affinity purification as outlined below.
DNA altmity resin was prepared as follows: 5'-biotmylated
ohgonucleotides containing 4 Spl binding sites. GCA(AGGGGCGGGGCT)4T and its complement, were annealed and coupled to streptavidin-agarose beads (Pierce) by incubating overnight at room temperature. The beads were incubated with WGA-purified Spl in buffer Z' (25 mM HEPES, pH 7.6, 20% glycerol, 0. 1 % NP-40, 10 mM ZnSO1. I mM DTT) containing 0. 1 M KCl for 2 hours at 4 °C. Spl was bound to the resm at a concentration of approximately 1 mg/ml of beads. 35S-labeled TAF1 10 w as incubated in batch with 15 ml of the DNA affinity resin in Z' + 50 mM KCl . with or without Spl, for 4 hours at 4 °C. The beads were washed 4 tunes with I ml ol the same bul ter, and eluted with Z' + 0.2 M KCl, followed by Z' + 1 .0 M KCl . The eluted proteins were TCA-precipitated and analyzed by SDS-PAGE. Beiore autoradiography. the gel was fixed and treated with Amplify (Amersham ).
Detection of Direct TBP/TAF Interactions on Protein Blots
Immunopurification ol the Drosophila TFIID complex using anti-TBP antibodies results in the purification of a large muitiprotein complex consisting of TBP and 7 major TAFs. To identify TAFs which can bind directly to TBP we probed a blot containing renatured T s with a 32P-labelled TBP-GST fusion protein. After washing oi l unbound P-fusion protein and exposing the blot to X-ray film a strong signal was seen which coincided with the position of dTAFII-250K on the gel. Further experiments revealed that a truncated version of TBP, consisting of the highly conserved C-termmal domain, is sufficient to mediate this interaction. We also tested other tractions containing basal factors (Wampler et al., 1990; Dynlacht et al . , 1991 ). including TFIIB, E/F and RNA polymerase II, and failed to detect specific signals. We conclude that TBP and TAFII-250K interact directly and that TAFI I-250K is present in the TFIID fraction but not associated with TFIIB, E, F or RNA polymerase II.
Molecular Cloning and Characterization of the dTAFH-250K Gene
Having identified dTAEII-250K as a candidate for a direct TBP-TAF interaction we decided to clone the corresponding gene. The low abundance and large size of dTAF(Il)-250K disiavours cloning strategies based on protein microsequencmg. Instead, w e were able to obtain monoclonal antibodies which specifically (and exclusively) recognize dTAF(II)-250K on Western blots. To show that dTAF(II)-250K is indeed a genuine component of the TFIID complex, we used two of these monoclonal antibodies. 2B2 and 30H9, to carry out
immunoprecipitations iron, the TFIID traction. The pattern and stoichiometry of TAFs and TBP is indistinguishable Irom the ones described previously using either anti-TBP (Dynlacht et al . , 199 1 ) or anti- dTAF(II)- 110K (Hoey et al. , 1993) antibodies. We cloned the gene encoding the Drosophila dTAF(II)-250K by screening a lgt l l expression library prepared from 6- 12 hour old embryos (Zinn et al., 1988) with hybridonia supematants containing either 2B2 and 30H9 anti-dTAF(II)-250K monoclonal antibodies. Five partial cDNA clones were obtained, which all cross-hvbridized with each other at high stringency. Restriction mapping and sequence analysis confirmed that they were indeed derived from the same gene. Two ot these cDNAs. ID- 1 and ID-2, allowed us to establish a composite open reading f rame spanning 4.5 kb (fig. 2). Attempts to isolate additional cDNA clones encoding N -terminal regions of dTAF(II)250 or 5'-RACE experiments have so tar been unsuccessful. Genomic DNA sequencing allowed us to extend the open reading frame by approximately 1 kb before encountering noncoding (presumanblv intronic) uences. Inspection of the open reading frame encoded by the cDNA clones reveals a protein sequence which displays an extensive similarity to the human 'Cell Cycle Gene I ' (CCG 1) gene previously described by Sekiguchi et al.. 1991 . Many of the sequence elements defined in the CCG1 genes arc also present in the dTAF-250K encoding sequence. Interestingly, however, we detected a 35 amino acid insertion in the region which Sekiguchi et al. putatively identified as an HMG box. This insertion causes substantial disruption of the spatial alignment with the consensus sequence. We also used the 1D-2 cDNA fragment to map the dTAFII-250K gene to position 32E1-2 (left arm of chromosome II) by in situ hybridization. This location does not contain any previously characterized genes and currently no deletions spanning that regions are available. Since dTAF-250 seems to be present in all or the majority of the TFIID complexes present within cells and seems to provide essential contact points with TBP and TAFs (see below) we expect that a deletion of the 32E1-2 locus would cause a lethal phonoiype.
Expression of the C -terminal domain of dTAF(ll)-250K in Insect Cells
To study the liinctional properties of the proteins encoded by these cDNAs we decided to express the protein encoded by the reading frame of our longest cDNA, 1D- 1. Because ol the expected large size of the protein encoded we chose the baculovirus system. After subclonmg of the fragment into expression vector pVL1393 and transtecting the construct into Sf9 cells we detected expression of a 180K protein (subsequently ref erred to as DN250) which cross-reacted strongly with several anti-TAF250 monoclonal antibodies recognizing a variety of epitopes in different parts ot the 250 K T AF. We detected no cross-reactivity between our antibodies and any endogenous Sp odoptera TAF250 homologs which might be present in Sf9 cells. The C-terminal Domain of the dTAF(l l)250K Is Sufficient for TBP Binding
To study whether DN250 was capable of interacting with TBP we immunopurified the protein irom mlected cells. Monoclonal antibody 30H9 was bound to protein A or G beads and incubated with extracts from baculovirus infected cells. Under these conditions DN250 is specifically immobilized on the beads. After washing of f unbound material we added an extract containing partially purified TBP (also expressed in the baculovirus system). TBP was specifically bound to beads carrying the immunopurified TAF250-C180 protein whereas beads containing antibody only failed to do so. Further evidence for this direct TBP-TAF interaction by carrying out protein blots. The ability of a protein representing appr. 60% of the full-length 250K protein to bind TBP demonstrates conclusively that the cloned C-termmal part is sufficient for TBP binding.
Gelshift Analysis of the DN250/TBP Complex
TBP is the only component of the general transcriptional machinery capable of sequence-specific binding to the TATA box. We therefore were interested to see how interaction of TBP with TAF250-C 180 affected the specificity and affinity of DNA binding. TBP was added to a 32-P labelled DNA fragment containing the -33 to +55 region of the adenovirus maior late promoter and DNA-binding was monitored using a gelshitt assay. The intensity of probe DNA shifted by TBP increased substantially in presence ol purified TAF250-C180 wheras TAF250-C180 alone did not dctectably bind to DNA. To investigate whether this enhanced affinity of the TBP/TAF250-C 180 complex for DNA was due to additional contacts with DNA provided by the TAF250-C 180 protein we carried out footprinting studies, again using the adenovirus maior later promoter region as a probe. TAF250 and TA F l I O Speci f ical ly Interact With Each Other, even in Absence of TBP
Since we have not observed any of the cloned Drosophila TAFs to bind to TBP we investigated whether they would interact with the TBP/ d250KdeltaC180 complex. 35S-labelled 1 10K protein (Hoey et al., 1993) was synthesized in an in-vitro translation system and incubated with TAF250-C 180 protein in presence and absence of TBP. As shown in fig. 5 we found that the 1 10K TAF binds specifically to dTAF(II)250K-C 180 in the presence and absence of TBP thus indicating that the two proteins bind independently to two distinct domains within the 250K TAF. The affinity and specificity of this interaction is sufficiently high to allow selective purification of TAF110 from a crude baculovirus extract expressing the recombinant protein by using TAF250-C 180 immobilized on beads.
Protein Blot Analysis
pGEX-2TK was linearized with Smal, phosphatase-treated and the ligated with gel-purified Ndel fragments of either pARdTFIID or pARdTFIID-191C (Hoey et al., 1990). Generation of 32-P labelled GST fusion protein, protein blotting and hybridization were carried out essentially as described in Kaelin et al., 1992. Generation of anti-dTA FI I-250K Hybridoma Cell Lines
The monoclonal antibodies described in this study were derived as described in Hoey et al.( 1993). Briefly, a Swiss-Webster mouse was immunized with intact immunopurified Drosophila TFIID complex. After fusion hybridoma supematants containing anti-dTAFII-250K antibodies were selected using stripblots containing SDS-gel-sep arated TBP and TAFs. Two such cell lines, 2B2 and 30H9, were then cloned to homogeneity by limited dilution.
Isolation of dTAFII-250 K cDN'A and Genomic Clones
Approximately 5x 105 independent plaques of a size-selected ( > = 1.8kb) Drosophila Igt l I library prepared I rom Drosophila embryos (Zinn et al., 19..) were screened with two independent antι-dTAFlI-250K monoclonal antibodies, 2B2 and 30H9. All the posiuves identi fied cross-hybridized at high stringency with each other on the DNA level . Restriction mapping and sequence analysis showed that all of the clones were derived f rom the same gene. cDNA clones 1D 1 and 1D2 contained inserts of 1 .5 and 4.0 kb. resp ectively. and were sequenced to completion. 1D2 was found to extend 500 bp further towards the 5' end of the gene and was used to isolate genomic clones IDASH3 and 1DASH4 (Sau3A partially digested DNA cloned into I DASH ).
Sequencing Strategy
We employed the gd transposon-directed sequencing strategy (Gold Biosystems) as described in Strathmann et al. , 1991. DNA fragments of interest were subcloned into the plasmid vector pMOB 1 and electroporated into DPWC cells. After conjugation with the recipient host BW26 the mixture was plated out on kanamycin/carbenicillin plates. Transposon insertion points were mapped by PCR. Clones with the desired transposon locations were then grown up and sequenced using transposon-speci fic primers with 35S-dATP or the Pharmacia A.L.F. Sequencer.
Expression of a Truncated Version of d TAFII-250K (DN250) in the Baculovirus System
cDNA #5 was inserted into the EcoRI site of Baculovirus-expression plasmid pVL1393 (Pharmingen). The resulting construct was co-transfected with 'BaculoGold' viral DNA ( Pharmingen) into Sf9 cells. After 3 days cells were harvested and expression of the DN250 protein was monitored by Western blotting using the anti-dTAFI I-250K monoclonal antibody 2B2. The recombinant virus-containing supernatant w as used to infect large scale cultures of Sf9 cells. We typically prepared whole cell extracts from 1 liter of plate cultures of infected Sf9-cells by sonicating them in HEMG-ND/0. 1 M KCl (HEMG-ND contains 25mM HEPES. pH7.6. mM MgCl2 0. 1 mM EDTA. 0. 1 % NP40, 1 mM PMSF, 1.5 mM DTT. 5mg/ml leupeptin ). The supernatant was partially purified
(approximately 5 fold ) by chromaiography over Q-sepharose (Pharmacia) with step gradient elution (HEMG containing 0. 1 M, 0.2. 0.4 and 1.0 M KCl, respectively). dTAFII-250K(C 180) eluted in the 0.4 M step(Q.4' fraction). After dialysis against HEMG-0. 1 M KCl the extract was f rozen in aliquots and used for the
immunopurification/coprecipitation studies. Coimmunopreciptiation Studies
Protein G-beads w ere preloabded with monoclonal antibodies and incubated with various cell extracts f ro m Baculovirus-mfected cell tractions or 35S-labelled dTAFII1 10 prepared by in vitro translation After 45 minutes on ice, unbound protein was removed w ith several washes with HEMG-ND. hTAFII250 purification and cloning
We previously reported the isolation of hTF lID by affinity chromatography using antibodies specific to TBP The purified complex contains at least seven distinct TAFs ranging in molecular weight from 30-250 kD which copurity with TBP. We were particularly interested in characterizing the 250 kD species because this subunit of TFl lD appears to bind TBP directly as determined by Far Western analysis. Using af f inity-purif ied TAFs to immunize mice, we generated both polyclonal and monoclonal antibodies that crossreact with different TAFs. We used these antibodies to screen Igt l l expression cDNA libraries and several clones were isolated, including IH I which contains a 1.1 kb insert. To determine which, if any, TAF is encoded by IH I , we expressed this cDNA as a GST fusion protein, purified the tagged protein by glutathione affinity chromatography, and raised antibodies against this recombinant protein. Antisera directed against GST-1H1 specifically crossrcacted with the 250 kD TAF, indicating that a portion of the gene encoding h TAFI I250 had been isolated.
Next, we determined the DNA sequence of IH I and discovered that this open reading frame is related to the |.revιouslv identified human gene, CCG1, which had been implicated in cell cycle regulation. Specifically, a
temperature-sensitive mutant hamster cell line, is 13, is arrested at G l a few hours before entering S phase at the non-permissive temperature. Expression of human CCG1 m ts l 3 overcomes this cell c y cle block. Since IH I only encoded a small portion of h TAF1 I250. w e isolated several additional clones from a primary HeLa cDNA library, including I H2. w hich contained a 5.3 kb insert. The construction of a full-length hTAFII250 cDNA revealed the predominant hTAFII250 RNA species characterized in Hel a cells encodes 2 1 additional amino acids between residues 177 and 178 relativ e to CCG 1. Interestingly, we sequenced several other cDNAs containing internal insertions or deletions when compared to CCG 1. This finding suggests that multiple hTAFII250-related proteins may be generated by alternate splicing of a primary transcript.
Although the finding that a cDNA isolated by antibodies directed against TAFs encodes a cell cycle gene is exciting, it was important to provide some functional evidence that this clone indeed encodes a bona fide TAF which is a subunit of TFIID. We first asked whether the recombinant hTAFII250 expressed in a vaccinia virus system becomes associated with the endogenous TFIID complex in HeLa cells. To distinguish between the recombinant and endogenous protein, we engineered a version containing a hemagglutinin antigen (HA) epitope at the N-terminus of hTAFII250. Antibodies against TBP were used to immunopurify the TFIID complex from HeLa cells infected with either recombinant or control vaccinia virus. The immunopurified complexes were subjected to gel
electrophoresis and analyzed by Western blot analysis using either a monoclonal anti-HA antibody to detect the HA-tagged molecule or monoclonal antibody 6B3, raised against the endogenous h TAFII250. The anti-HA antibody crossreacted specifically with a 250 kD protein only in the TFIID complex prepared from recombinant hTAFII250 virus infected HeLa cells but not control infected cells. As expected, 6B3 recognized both the recombinant hTAFII250 and the endogenous protein. Thus, we conclude that the recombinant hTAFII250 associates with TBP in vivo and is part of the TFIID complex.
To test for a direct interaction between hTAFII250 and TBP, we performed a Far Western analysis with radiolabellcd TBP and antibody immunopurified HA-tagged h TAFII250. The full-length hTAFII250 is capable of interacting directly with TBP in vitro, even in the absence of other TAFs or coactivators. These results and the analysis of the independently cloned Drosophila TAFII250 suggest that this largest TAF is responsible for the initial assembly of the TFIID complex by binding directly to TBP and other TAFs.
The important role of h TAFII250 in the formation of a TFIID complex prompted us to define more precisely its interaction with TBP. For these studies we employed the two hybrid system carried out in yeast cells. Using this rapid and convenient assay for proteimprotein interactions, we observed that a hybrid construct containing hTAFII250 fused to the DNA binding domain of GAL4, G4(1-147), interacted selectively and efficiently with human TBP attached to the acidic activation domain of GAE4. (54(768-881 ). Yeast expressing both of these proteins produced high levels of b-galactosidase due to increased transcription of a lacZ reporter construct, containing GAL4 binding sites. Interestingly, hTAFII250 also interacts efficiently with a truncated version of human TBP which contains only the conserved C-terminal 180 amino acids. By contrast, a construct containing the "species-specific" N-terminal domain of human TBP failed to interact with hTAFII250. These results are in agreement with Far Western experiments using radiolabelled cTBP and nTBP as probes and suggest that residues 160 to 339 on the outer surface of TBP may be responsible for hTAFII250 binding.
Our unexpected finding that hTAFII250 is related to CCG 1 suggests a rather intriguing link between a subunit of TFIID and expression of genes involved in cell cycle control. Interestingly. CCG 1 is a nuclear phosphoprotein with several domains characteristic of transcription factors including a putative HMG-box and a proline-rich cluster. Based on these structural motifs, Sekiguchi et al. suggested that CCG1 might work as a sequence-specific transcription factor needed for regulating genes involved in the progression through G l . However, it now seems clear that CCG 1 or a related product is part of the TFIID complex and is not a promoter-specific transcription factor. Therefore, it seems more likely that the G1 arrest in ts13 is due to the failure of a defective TFIID complex to mediate activation by a subset of cellular transcription factors that govern cell cycle genes, e.g. thymidine kinase and dihydrofolate reductase genes. The presence of a putative DNA binding domain, the HMG box, may suggest that once hTAFII250 forms a complex with TBP. some portion of this large subunit of TFIID may contact DNA, perhaps downstream of the initiation site.
Immunoaffinity purified hTPl l D complex: Interaction with hTBP and production of hTAFs-specific antibodies
A. Immumoprecipitation reactions were carried out according to a modified version of previously described procedures (Tanese et. al.). 0.5 mg of affinity purified a-hTBP antibody was added to 200 mg of hTFIID (phosphocellulose 0.48 - 1.0 M KCl) fraction, and the mixture nutated for 2 - 4 hrs at 4oC. Protein A Sepharose was then added and nutation continued for an additional 2 - 4 hrs. Antibody-antigen complexes were pelleted by low-speed centrifugation, washed four times with 0. 1 M KCl - HEMG (25mM Hepes, 12.5 mM MgCl2, 0.1 mM EDTA. 10% glycerol ) containing 0. 1 % NP-40 and I mM DTT. The immunoprecipitated hTFIID complex was subjected to 8% SDS-PAGE and silver stained. For Far Western analysis, the proteins were blotted onto nitrocellulose membrane and hybridized with 35S-labeled hTBP (Kaelin et al.). pTbhTBP was used to in vitro transcribe hTBP RNA which was in vitro translated using 120 mCi 35S-methionine ( > 1000 Ci/n.Mol. Amersham) in reticulocyte lysate (Promega).
B. Antigen used to immunize mice for antibody production was prepared as follows. The immunoprecipitated hTFIID complex, purified from 250 litres of HeLa cells, was eluted from the Protein A Sepharose - antibody complex with 0.1 M KCl - HEMG containing I M guanidine - HCl, 0. 1 % NP-40, and 1 mM DTT. Under these conditions TBP remained bound to the antibody. The eluted TAFs were dialized against 0. 1 M KCl - HEMG containing 0. 1 % NP-40 and 1 mM DTT. The mixture of proteins containing 1 -2 mg of each TAF was used to immunize a mouse. Test bleeds were taken and the immune response monitored by Western blot analysis. After a series of five boosts, the mouse was sacrificed and the spleen was used for the production of monoclonal antibody producing hybridoma cells lines. The identification of hybridoma cell lines producing hTAF specific antibodies was determined by Western blot analysis of eluted TAFs.
Cloning and identification of the 250 kD subunit of hTFIID complex as CCG1
A. An expression screen of 2.4 x 106 PFU from a lgt1 1 HeLa S3 cDNA library (Clontcch) was carried out using the a-hTAFs polyclonal serum described above. 38 primary signals w ere identified of which 6 were plaque purified. 1 phage DNA was prepared and analyzed by EcoRI restriction enzyme digestion. IH1 contained a 1 . 1 kb insert which was subcloned into the EcoRI site of pGEX1 (Pharmacia) to express a GST-IH 1 fusion protein. The resulting construct was transformed into Escherichia coli TG2, and following induction with 0.5 mM IPTG, the induced protein was purified on glutathione Sepharose 4B beads
(Pharmacia). 2 mg (per miection ) of the fusion protein was used to immunize a mouse. Test bleeds were taken and used for Western blot analyses. B. Poly(A)+ RNA from HeLa cells was used for construction of a directional cDNA library in 1ZAPII (Stratagene) as described previously (Ruppert et al. 1992). Using a randomly 32P-labeled probe derived from the IH1 cDNA insert, 15 independent cDNA clones were isolated from 1.2 x 106 original PFU. The cDNA inserts were rescued by the zapping procedure (Short et al.) and characterized extensively by restriction enzyme analysis and Southern blotting. The longest cDNA clone isolated from lH2 contains a 5.3 kb insert, revealing an extended 3' untranslated region but missing about 1.15 kb of 5' sequences when compared to CCG 1. This 5' region was generated by PCR using conditions described previously (Ruppert et al.). Two set of PCR primers were designed according to the CCG 1 cDNA sequence (Sekiguchi et al). PCR-I, forward primer #1: 5'-TATTTCCGGCATATGGGACCCGGCTG-3' (position 40 to 65, containing an engineered Ndel restriction site at the translation start codon) and reverse primer #2: 5'-GAAGTCCACTTTCTCACCAG-3' (position 578 to 597). PCR-II, forward primer #3: .5'-TACCAGCAGCATATGGGGAGCTTGCAG-3' (position 421 to 447) and reverse primer #4:
5'-GCTCTAAGGAAGCCAGCCTGCCAGGCTTG-3' (position 1343 to 1371). All PCR products were subcloned into pBluescript KS (Stratagene) and sequenced. The most abundant product of PCR-II, a 1 kb fragment, included a 63 bp in frame insertion , while a minor 330 bp fragment revealed a 618 bp in frame deletion with respect to the CCG 1 cDNA. To generate a full-length hTAFII250 cDNA, the product of PCR-I and the I kb PCR-II product were joined via the shared Smal restriction site. Subsequently the 1.2 kb Xbal fragment of the resulting plasmid was cloned into Xbal cut pH2 to generate the full-length cDNA clone phTAFII250.
Analyses of h TAFII250 and hTBP interaction
A. To construct an HA-tagged version of 1.TAFII250 we generated a plasmid, pSK-HAX. containing the hemagglutinin antigen (HA) epitope, factor X cleavage site, and in frame Ndel cloning site. A 6.3 kb Ndel/Asp718 fragment from phTAFII250 was inserted into pSK-HAX to generate pHAX-hTAFII250. A 6.0 kb Spel fragment thereof containing the complete coding region of
hTAFII250,was inserted into the Xbal site of the vaccinia virus expression vector pAbT4537 (Applied bioTechnology Inc.). Extracts from recombinant virus, vhTAFII250, or control virus ( New York City Board of Health strain of vaccinia virus) infected HeLa cells ( Dynlacht 1989) were fractionated by phosphocellulose chromatography as described (Tanese et al.). hTFIID complexes from the 0.48 - 1.0 M KCl fraction were immunoprecipitated with affinity-purified a-hTBP antibodies, subjected to 8% SDS-PAGE and analyzed by Western blotting.
B. To generate an HA-tagged version of 1.TAFII250 in the baculovirus expression system, we first generated new baculovirus vectors, pVL1392HAX and pVL1393HAX, derived from pVL1392 and pVL1393 (Pharmingen), respectively. These vectors contain the HA antigen epitope, factor X cleavage site, and unique in frame Ncol and Ndel restriction sites. A 6.0 kb Ndel/Spel fragment from phTAFII250 was inserted into pVE 1392HAX creating pbHAX-hTAFII250. Whole cell extracts from cither SF9 cells or SF9 cells infected with recombinant baculovirus were prepared in 0.4 M KCl - HEMG (including 0.04% NP-40, 1 mM DTT, 0.2 mM AEBSF. 0. 1 mM NaMBS) and used directly for
immunoprecipitation with the a-HA antibody. The precipitate was subjected to 8% SDS-PAGE and blotted onto nitrocellulose membrane. The filter was probed first with 35S-labeled hTBP. and subsequently with the monoclonal antibody 6B3. hTAFII250 interacts with hTBP in yeast
hTAFII250, fused to the DNA binding domain of GAL4 (residues 1-147), was constructed by inserting a 6.0 kb Ndel/BamHI fragment derived from pvhTAFII250 into the pASl vector. The activation domain fusions were obtained by cloning inserts into the p GAD I F vector (Chien et al.). The hybird proteins generated included the acidic activation domain of GAL4 (residues 768-881) fused to either full-length . residues 160-339. or residues 1 - 159 of hTBP. The above described constructs were transformed into the yeast strain Y 153 (a, ga14, ga180, his3, trpl-901. ade2- 101 . ura3-52. leu2-3, 1 12, URA3::Gal l :lacZ,
LYS2::Gal-His3: as described (Chien et al. ) and b-galactosidase assays performed according to published procedures ( Hoey et al).
Drosophila TBP and dT A FII250 interact with the C-terminal portion of dTAFII150 Radiolabeled in vitro translated dTAFII 150 bound efficiently to immobilized HA-dTBP or dTAFI I250ΔN (sec Weinzierl et al ( 1993) Nature 362, 511-517). In contrast, dTAFII 1 10 and other TAFs failed to interact selectively with dTAFII150, showing that dTAFI I 150 interacts with at least two subunits of the TFIID complex, dTBP and dTAFII250 . which also contact each other.
We also carried out in vivo experiments in which insect Sf9 cells were coinfected with two recombinant baculoviruses, one expressing dTAFII150 and the second expressing either TBP or one of the other TAFs. Complexes were subsequently immunopurified from cellular lysates and analyses by SDS PAGE followed by immunoblotting using antibodies directed against dTAFII150.
Coinfection of virus expressing dTAFII 150 and either HA-dTBP or dTAFII250ΔN resulted in efficient formation and copurification of heteromeric complexes.
Similarly, full-length I.TAFII250 bound efficiently to dTAFII 150.
Radioiabeled in vitro translated C-terminal 369 residue portion
(dTAFII150ΔN) of this protein binds TBP and dTAFII250ΔN with the same effenciency as the full length protein. No significant binding of a N-terminal 786 residue portion (dTAFII 150ΔC) was observed: i.e. the interaction interfaces from these proteins are located in the C-terminal po rtion of dTAFII150.
TSM-1 associates with TBP and TA FII250
Like dTAFII 150. TSM 1 ΔN (C-terminal 920 residue portion) bound efficiently to yTBP as well as HΔ-dTBP: hence we conclude that yeast contain a TAFII250 and TSM- 1 is a TAF.
The activation domain of the Drosophila regulator NTF-1 (Neurogenic Element Binding Transcription Factor- 1 ) interacts with dTAFII150.
NTF-1 immuno-copurif ies with dTFIID using anti-dTBP, indicatin that one or more subunits of the dTFIID interacts directly with NTF-1. Using
coimmunoprecipitation experiments: dTAFII 150 was immunopurified from Sf9 extracts containing dTAFII 150. the immobilized TAF was mixed with recombinant NTF-1, the isolated complex was analyzed by SDS-PAGE, and the presence of NTF-1 was detected by protein immunoblot anaysis, showing that NTF-1 directly interacts with dTAFII 150.
Next we used a GST-NTF- 1 fusion protein containing the N-terminal 284 amino acids of NTF- 1 to bind various truncated bersions of dTAFII150, showing that the N-terminal . but not the C-terminal region of dTAFII 150 bound to the N- terminal extended activation domain of NTF- 1. Neither dTAFII80 nor dTAFII40 bound significantly under these conditions.
Using an affinity resin containing a covalently attached synthetic peptide corresponding to the 56 ammo acid minimal activation domain of NTF-1 , we showed that this region is sufficient to interact with dTAFII150 and that the activator interface of dTAFII 150 is distinct from the C-terminal region with interacts with dTBP and dTAFII250. Hence, the requirement for TAFs during NTF-1 activation is at least in part mediated by NTF- 1 :dTAFII 150 interactions. TAF Sequence Data
Nucleotide and amino acid sequences of:
dTAFII30α .(SEQ ID NO.21. 22)
dTAFU30β .(SEQ ID NO:23. 24)
dTAFII40 (SEQ I D NO:8. 9)
dTAFII60 (SEQ ID NO:6, 7)
dTAFII80 (SEQ ID NO:4. 5)
dTAFII 1 10 (SEQ ID NO: 1 , 2)
dTAF 150 (SEQ ID NO: 19, 20 )
dTAFII250 (SEQ ID NO:3. 14) hTAFII30 α.(SEQ ID NO:28)
h TAFII30β.(SEQ ID NO:27)
hTAFII40 (SEQ ID NO:25. 26)
hTAFII70 SEQ ID NO: 12. 13)
hTAFII 100 (SEQ ID NO: 17. 18)
hTAFII 130 (SEQ I D NO: 15. 16)
hTAFII250 (SEQ ID NO: 10. 1 1 ) hTAFI48 (SEQ ID NO:29. 30)
hTAFI l 10 (SEQ I D NO:31. 32) were obtained as described above. Additional methods relating to Poll TAFs may be found in Comai et al . ( 1992) Cell 68. 965-976. It is evident from the above results that one can use the methods and compositions disclosed herein for making and identifying diagnostic probes and therapeutic drugs. It will also be clear to one skilled in the art from a reading of this disclosure that advantage can be taken to effect alterations of gene expression: both genes encoding TAF and genes amenable to TAF-mediated transcriptional modulation. Such alterations can be effected for example, using a small molecule drug identified with disclosed TAF-based screening assays.
All publications and patent applications cited in this specification are herein incorporated by reference as if each individual publication or patent application were specifically and individually indicated to be incorporated by reference.
Although the foregoing invention has been described in some detail by way of illustration and example for purposes of clarity of understanding, it will be readily apparent to those of ordinary skill in the art in light of the teachings of this invention that certain changes and modifications may be made thereto without departing from the spirit or scope of the appended claims.
SEQUENCE LISTING
(1) GENERAL INFORMATION:
(i) APPLICANT: Tjian, Robert
Comai, Lucio
Dynlacht, Brian D
Hoey, Timothy
Ruppert, Siegfried
Tanese, Naoko
Wang, Edith
Weinzierl, Robert O.J.
(ii) TITLE OF INVENTION: TATA-Binding Protein Associated Factors,
nucleic acids encoding TAFs, and Methods of Use.
(iii) NUMBER OF SEQUENCES: $.32.
(iv) CORRESPONDENCE ADDRESS:
(A) ADDRESSEE: Flehr, Hohbach, Test, Albritton &
Herbert
(B) STREET: 4 Embarcadero Center, 34th Floor
(C) CITY: San Francisco
(D) STATE: CA
(E) COUNTRY: USA
(F) ZIP: 94111
(v) COMPUTER READABLE FORM:
(A) MEDIUM TYPE: Floppy disk
(B) COMPUTER: IBM PC compatible
(C) OPERATING SYSTEM: PC-DOS/MS-DOS
(D) SOFTWARE: Patentln Release #1.0, Version #1.25
(Vi) CURRENT APPLICATION DATA:
(A) APPLICATION NUMBER: PCT/US9A/
(B) FILING DATE: 28-JAN-1994
(C) CLASSIFICATION:
(viii) ATTORNEY/AGENT INFORMATION:
(A) NAME: Osman, Richard A
(B) REGISTRATION NUMBER: 36,627
(C) REFERENCE/DOCKET NUMBER: FP57650-2RA0
(ix) TELECOMMUNICATION INFORMATION:
(A) TELEPHONE: 415-494-8700
(B) TELEFAX: 415-494-8771
(2) INFORMATION FOR SEQ ID NO:1:
(i) SEQUENCE CHARACTERISTICS: (A) LENGTH: 4615 base pairs
(B) TYPE: nucleic acid
(C) STRANDEDNESS: single
(D) TOPOLOGY: linear
(ii) MOLECULE TYPE: cDNA
(ix) FEATURE:
(A) NAME/KEY: CDS
(B) LOCATION: 538..3300
(xi) SEQUENCE DESCRIPTION: SEQ ID NO:1:
CAACTCGTCC GTACCTCGGC GGTCCGTAAA CAATATTTAC TCGGTTTTCG GCTAAATCGC
60
CAGAGAAACG CAACGGGAAA TCGTTTAAAA TGCGCCCCAG TGCACCGAGT TTGAACGCAA
120
AATGAATTGA ATGCTCAACA ATCAGTCCGT GCGAGCACGC GCGAGTGTGT GTGTGCGCAG
180
GAAAACCCGC CGATCGGGAA AAGTGTAGAA AGGCTTAGCG GCGCAAACAA AAGGCAGCGA
240
ATTAGCGAGA TAACACACAC GCGACAACGA CTGCAACGGA TGCGCCAGGA GAAAGGCCGA
300
CGACAGTGAC GGCAAAGGCG AGTGCGAGTG AGCCAGCGCA GCACCAATTC AGCGGAGCAC
360
CCGCTTTTTT GGCCAAGTTC GCTTCTGGAG CGCACAGCAT GCAACAACTC CGCCAACACC
420
AACACAGGAT GTGCGCAACT AGTTGATCGG AACAGGATCG CTCGCCCACA CCAACACACA
480
GAAGTCAGTG GAATAGGAGA AACACACTCG CCAATAACAT AAACACCACA CAGCACG
537
ATG AAC ACC AGC CAG ACA GCT GCC GGC AAT CGC ATC ACC TTC ACC AGC
585 Met Asn Thr Ser Gln Thr Ala Ala Gly Asn Arg lle Thr Phe Thr Ser
1 5 10
15
CAG CCG CTG CCC AAT GGC ACC ATC AGC ATA GCC GGC AAT CCC GGC GCG
633
Gln Pro Leu Pro Asn Gly Thr lle Ser lle Ala Gly Asn Pro Gly Ala
20 25 30
GTC ATC TCC ACG GCC CAG CTA CCG AAT ACC ACC ACC ATC AAG ACG ATC
681
Val lle Ser Thr Ala Gln Leu Pro Asn Thr Thr Thr lle Lys Thr lle
35 40 45
CAG GCG GGG ATC GGT GGT CAG CAT CAG GGA CTT CAG CAG GTG CAT CAT
729
Gln Ala Gly lle Gly Gly Gln His Gln Gly Leu Gln Gln Val His His
50 55 60
GTC CAA CAG CAG CAG CAG TCG CAA CAG CAA CAA CAG CAG CAA CAG CAG
777
Val Gln Gln Gln Gln Gln Ser Gln Gln Gln Gln Gln Gln Gln Gln Gln
65 70 75
80
ACG CAA TCC GCC GGT CAA CCG CTG CTC AAT TCA ATG CTG CCG GCT GGC
825
Thr Gln Ser Ala Gly Gln Pro Leu Leu Asn Ser Met Leu Pro Ala Gly
85 90
95
GTG GTG GTG GGC ATG CGC CAA CAG GCG CCG TCA CAG CAG CAG CAG AAG
873
Val Val Val Gly Met Arg Gln Gln Ala Pro Ser Gln Gln Gln Gln Lys
100 105 110 AAT GTG CCC ACC AAC CCG CTC AGT CGC GTG GTG ATC AAC TCC CAC ATG
921
Asn Val Pro Thr Asn Pro Leu Ser Arg Val Val lle Asn Ser His Met
115 120 125
GCG GGC GTG AGA CCG CAG AGT CCA TCG ATA ACT TTA AGC ACA CTT AAT
969
Ala Gly Val Arg Pro Gln Ser Pro Ser lle Thr Leu Ser Thr Leu Asn
130 135 140
ACG GGT CAG ACC CCG GCA TTG CTG GTC AAG ACG GAT AAC GGA TTC CAG
1017
Thr Gly Gln Thr Pro Ala Leu Leu Val Lys Thr Asp Asn Gly Phe Gln
145 150 155
160
CTG TTG CGC GTG GGC ACG ACG ACG GGT CCG CCG ACG GTG ACA CAG ACT
1065
Leu Leu Arg Val Gly Thr Thr Thr Gly Pro Pro Thr Val Thr Gln Thr
165 170 175
ATA ACC AAC ACC AGC AAT AAC AGC AAC ACG ACA AGC ACC ACA AAC CAT
1113
Ile Thr Asn Thr Ser Asn Asn Ser Asn Thr Thr Ser Thr Thr Asn His
180 185 190
CCC ACA ACC ACA CAG ATC CGT CTG CAA ACT GTG CCG GCT GCA GCT TCT
1161
Pro Thr Thr Thr Gln Ile Arg Leu Gln Thr Val Pro Ala Ala Ala Ser
195 200 205
ATG ACC AAC ACG ACC GCC ACC AGC AAC ATC ATT GTC AAT TCG GTG GCA
1209
Met Thr Asn Thr Thr Ala Thr Ser Asn Ile Ile Val Asn Ser Val Ala 210 215 220
AGC AGT GGA TAT GCA AAC TCT TCG CAG CCG CCG CAT CTG ACG CAA CTA
1257
Ser Ser Gly Tyr Ala Asn Ser Ser Gln Pro Pro His Leu Thr Gln Leu
225 230 235
240
AAT GCG CAG GCG CCA CAA CTG CCG CAG ATT ACG CAG ATT CAA ACA ATA
1305
Asn Ala Gln Ala Pro Gln Leu Pro Gln Ile Thr Gln Ile Gln Thr Ile
245 250 255
CCG GCC CAG CAG TCT CAG CAG CAG CAG GTG AAC AAT GTA AGC TCC GCG
1353
Pro Ala Gln Gln Ser Gln Gln Gln Gln Val Asn Asn Val Ser Ser Ala
260 265 270
GGA GGA ACG GCA ACG GCG GTC AGC AGT ACG ACG GCA GCG ACG ACG ACG
1401
Gly Gly Thr Ala Thr Ala Val Ser Ser Thr Thr Ala Ala Thr Thr Thr
275 280 285
CAG CAG GGC AAT ACC AAA GAA AAG TGT CGC AAG TTT CTA GCC AAT TTA
1449
Gln Gln Gly Asn Thr Lys Glu Lys Cys Arg Lys Phe Leu Ala Asn Leu
290 295 300
ATC GAA TTG TCG ACA CGG GAA CCG AAG CCG GTG GAG AAG AAC GTG CGC
1497
Ile Glu Leu Ser Thr Arg Glu Pro Lys Pro Val Glu Lys Asn Val Arg
305 310 315
320
ACC CTC ATC CAG GAG CTG GTC AAT GCG AAT GTC GAG CCG GAG GAG TTT
1545 Thr Leu Ile Gln Glu Leu Val Asn Ala Asn Val Glu Pro Glu Glu Phe
325 330 335
TGT GAC CGC CTG GAG CGC TTG CTC AAC GCC AGC CCG CAG CCG TGT TTG
1593
Cys Asp Arg Leu Glu Arg Leu Leu Asn Ala Ser Pro Gln Pro Cys Leu
340 345 350
ATT GGA TTC CTT AAG AAG AGT TTG CCT CTG CTA CGA CAA GCC CTC TAC
1641
Ile Gly Phe Leu Lys Lys Ser Leu Pro Leu Leu Arg Gln Ala Leu Tyr
355 360 365
ACA AAG GAG CTG GTC ATC GAA GGC ATT AAA CCT CCG CCG CAG CAC GTT
1689
Thr Lys Glu Leu Val Ile Glu Gly Ile Lys Pro Pro Pro Gln His Val
370 375 380
CTC GGC CTG GCC GGA CTC TCT CAA CAG TTG CCT AAA ATC CAA GCG CAA
1737
Leu Gly Leu Ala Gly Leu Ser Gln Gln Leu Pro Lys Ile Gln Ala Gln
385 390 395
400
ATC CGT CCG ATC GGT CCT AGC CAG ACA ACG ACC ATT GGA CAG ACG CAG
1785
Ile Arg Pro Ile Gly Pro Ser Gln Thr Thr Thr Ile Gly Gln Thr Gln
405 410 415
GTG CGT ATG ATA ACG CCG AAT GCC TTG GGC ACG CCG CGA CCC ACC ATT
1833
Val Arg Met Ile Thr Pro Asn Ala Leu Gly Thr Pro Arg Pro Thr Ile
420 425 430 GGC CAC ACC ACG ATA TCG AAG CAG CCA CCG AAT ATT CGG TTG CCT ACG
1881
Gly His Thr Thr Ile Ser Lys Gln Pro Pro Asn Ile Arg Leu Pro Thr
435 440 445
GCC CCG CGT CTC GTC AAC ACT GGA GGA ATT CGC ACC CAG ATA CCC TCG
1929
Ala Pro Arg Leu Val Asn Thr Gly Gly Ile Arg Thr Gln Ile Pro Ser
450 455 460
TTG CAG GTG CCT GGT CAG GCG AAC ATT GTG CAA ATA CGT GGA CCG CAG
1977
Leu Gln Val Pro Gly Gln Ala Asn Ile Val Gln Ile Arg Gly Pro Gln
465 470 475
480
CAT GCT CAG CTG CAG CGT ACT GGA TCG GTC CAG ATC CGG GCC ACC ACT
2025
His Ala Gln Leu Gln Arg Thr Gly Ser Val Gln Ile Arg Ala Thr Thr
485 490 495
CGT CCG CCA AAC AGT GTG CCC ACC GCG AAC AAA CTC ACT GCC GTC AAG
2073
Arg Pro Pro Asn Ser Val Pro Thr Ala Asn Lys Leu Thr Ala Val Lys
500 505 510
GTG GGA CAG ACG CAA ATC AAA GCG ATT ACG CCC AGC CTG CAT CCA CCC
2121
Val Gly Gln Thr Gln Ile Lys Ala Ile Thr Pro Ser Leu His Pro Pro
515 520 525
TCG CTG GCG GCA ATC TCA GGT GGA CCA CCG CCG ACA CCC ACG CTG TCT
2169
Ser Leu Ala Ala Ile Ser Gly Gly Pro Pro Pro Thr Pro Thr Leu Ser 530 535 540
GTT TTG TCT ACG TTG AAC TCC GCC TCG ACC ACA ACG CTG CCC ATA CCA
2217
Val Leu Ser Thr Leu Asn Ser Ala Ser Thr Thr Thr Leu Pro Ile Pro
545 550 555
560
TCG TTA CCC ACG GTC CAC CTT CCC CCC GAA GCT CTT CGA GCC CGT GAG
2265
Ser Leu Pro Thr Val His Leu Pro Pro Glu Ala Leu Arg Ala Arg Glu
565 570 575
CAG ATG CAA AAT TCG CTG AAC CAC AAC AGC AAT CAC TTC GAT GCA AAA
2313
Gln Met Gln Asn Ser Leu Asn His Asn Ser Asn His Phe Asp Ala Lys
580 585 590
CTG GTG GAG ATC AAG GCG CCG TCG CTG CAT CCG CCG CAC ATG GAG CGG
2361
Leu Val Glu Ile Lys Ala Pro Ser Leu His Pro Pro His Met Glu Arg
595 600 605
ATC AAC GCA TCT CTC ACA CCG ATT GGA GCC AAG ACG ATG GCA AGG CCG
2409
Ile Asn Ala Ser Leu Thr Pro Ile Gly Ala Lys Thr Met Ala Arg Pro
610 615 620
CCG CCT GCG ATC AAC AAG GCG ATA GGG AAA AAG AAA CGC GAC GCC ATG
2457
Pro Pro Ala Ile Asn Lys Ala Ile Gly Lys Lys Lys Arg Asp Ala Met
625 630 635
640
GAA ATG GAC GCC AAA TTG AAC ACA TCG AGC GGA GGA GCG GCG TCC GCT
2505 Glu Met Asp Ala Lys Leu Asn Thr Ser Ser Gly Gly Ala Ala Ser Ala
645 650 655
GCG AAC TCG TTT TTC CAG CAG AGC TCC ATG TCC TCG ATG TAC GGT GAC
2553
Ala Asn Ser Phe Phe Gln Gln Ser Ser Met Ser Ser Met Tyr Gly Asp
660 665 670
GAT GAT ATC AAC GAT GTT GCC GCC ATG GGA GGT GTT AAC TTG GCG GAG
2601
Asp Asp Ile Asn Asp Val Ala Ala Met Gly Gly Val Asn Leu Ala Glu
675 680 685
GAG TCG CAG CGA ATT CTC GGC TGT ACC GAA AAC ATC GGC ACG CAG ATT
2649
Glu Ser Gln Arg Ile Leu Gly Cys Thr Glu Asn Ile Gly Thr Gln Ile
690 695 700
CGA TCC TGC AAA GAT GAG GTT TTT CTT AAT CTC CCC TCG CTG CAA GCT
2697
Arg Ser Cys Lys Asp Glu Val Phe Leu Asn Leu Pro Ser Leu Gln Ala
705 710 715
720
AGA ATA CGG GCA ATT ACT TCG GAG GCG GGA CTG GAT GAG CCG TCG CAG
2745
Arg Ile Arg Ala Ile Thr Ser Glu Ala Gly Leu Asp Glu Pro Ser Gln
725 730 735
GAT GTG GCC GTT CTG ATA TCG CAC GCC TGT CAG GAG CGC CTG AAG AAC
2793
Asp Val Ala Val Leu Ile Ser His Ala Cys Gln Glu Arg Leu Lys Asn
740 745 750 ATC GTT GAG AAG TTG GCT GTG ATA GCG GAG CAC CGC ATT GAT GTC ATC
2841
Ile Val Glu Lys Leu Ala Val Ile Ala Glu His Arg Ile Asp Val Ile
755 760 765
AAG TTG GAT CCA CGC TAT GAG CCC GCC AAG GAT GTG CGC GGT CAG ATC
2889
Lys Leu Asp Pro Arg Tyr Glu Pro Ala Lys Asp Val Arg Gly Gln Ile
770 775 780
AAG TTT CTC GAG GAG CTG GAC AAG GCC GAG CAG AAG CGA CAC GAG GAA
2937
Lys Phe Leu Glu Glu Leu Asp Lys Ala Glu Gln Lys Arg His Glu Glu
785 790 795
800
CTG GAG CGT GAG ATG CTG CTG CGG GCA GCC AAG TCA CGG TCG AGG GTG
2985
Leu Glu Arg Glu Met Leu Leu Arg Ala Ala Lys Ser Arg Ser Arg Val
805 810 815
GAA GAT CCC GAG CAG GCC AAG ATG AAG GCG AGG GCC AAG GAG ATG CAA
3033
Glu Asp Pro Glu Gln Ala Lys Met Lys Ala Arg Ala Lys Glu Met Gln
820 825 830
CGC GCC GAA ATG GAG GAG TTG CGT CAA CGA GAT GCC AAT CTG ACG GCG
3081
Arg Ala Glu Met Glu Glu Leu Arg Gln Arg Asp Ala Asn Leu Thr Ala
835 840 845
CTG CAG GCG ATT GGA CCT CGG AAA AAG CTG AAG CTG GAC GGC GAA ACA
3129
Leu Gln Ala Ile Gly Pro Arg Lys Lys Leu Lys Leu Asp Gly Glu Thr 850 855 860
GTC AGT TCG GGA GCG GGT TCA AGT GGC GGC GGA GTG CTA AGC AGC TCG
3177
Val Ser Ser Gly Ala Gly Ser Ser Gly Gly Gly Val Leu Ser Ser Ser
865 870 875
880
GGA TCT GCG CCG ACG ACG TTA CGG CCT CGC ATA AAA CGT GTG AAC CTG
3225
Gly Ser Ala Pro Thr Thr Leu Arg Pro Arg Ile Lys Arg Val Asn Leu
885 890 895
CGC GAC ATG CTC TTC TAC ATG GAG CAA GAG CGG GAG TTC TGT CGC AGT
3273
Arg Asp Met Leu Phe Tyr Met Glu Gln Glu Arg Glu Phe Cys Arg Ser
900 905 910
TCC ATG CTG TTC AAG ACA TAC CTC AAG TGATCGCTGC TGTTGCCCAT
3320
Ser Met Leu Phe Lys Thr Tyr Leu Lys
915 920
CAATCGCACC GTCTTCTCCT CGCCGATCCT CCTACTCCGT GGACTGTCGT GTTGTTGTTT
3380
TATACAGCTT TACGATTTCA TCCACTTGCA ATATATTTTA GCCTCAACTT TAAATGCGTC
3440
GCGTGTCCCC TGTTGTTGTT TCTTTTTAGT TAGGCGGCTC TATTTAATTT CTATTTTTAC
3500
ATTTATTTAC ATAAATCCTA AATTCTAATC GTATTTGATT TTAAGCCTAA TTTAAAGCTC
3560
GTTTATTTTT CCAATAAATT CTCTGTAAAA CTTAAACCAA ACCAATCCAA AAACAAAACA
3620 AAACCAGAGT AAACGAAGAG AATAAAATAA TAGAGAGGAA AGTAAAAGAA GGTAAAAGAG
3680
AGCGCGCAGT CAGCGGTCGT TTGATTTGTA ATTTGTAACA TAATAATGTT TGCATCAACT
3740
GCATTGACGG CCTTATCTAA ACGATATAAA CATAATTATT AATATTTAAT TATTTAGCTT
3800
AGTTTGTTAA ACGAAAACGA ACCATAATTC CTAGATTTTA AGTAAAAAGC AAGGGCGCGT
3860
GAAGAGAAAT CGAAACCGAA TTACAGATAA AGGTTTTTAA AACCAACTAG ATCGAAACAA
3920
GTTCAGCAAC AGCAAAACAA AAGAACACAT CAAAAAAAGA ACCGAAAAAT ATCCATTTAA
3980
ACATCCATTG AATTAGGTTT AGTTGTTTAA AAAAGATGTA ATTTTTAATT ACCCATAATG
4040
TATAAACGGA AATCAATCGT TAGGCAAGAC CACAACAAAC CCAACAAATT GTAAATACAT
4100
TCTAGGCTAC GGTTTTTCTA ATAGATAACT AGGTAAAAAC GCAAACGTAA TTAACAAATT
4160
ATCGATGGCA AGGAGCGATG CGAGCGCAGA CAACTTGGCA CACCGAAAAA ATATGTTTTT
4220
ATTAGTGGCG CTCGTTCATC CATTAAGAAT GGCGATTCAT TAGGCTCCAT AGATCCATAA
4280
ATCCCCTAAT CCAATCTGAA CTACACACAA AATAGACAAA TTTTATACAA TTAGCTCGAT
4340
AAATCTTGTA AAATAGAGTC CCGTAAAAAA TTATAACAAA TAAATTGACA ACAATTGATG
4400
TAATTCAGTA AACCTAAGCA AAAAGTGAAA CCATTCTAAG CAAATTCTTT GTGTGTAAAA 4460
ATTAATATGA TAAACAAAAT GCAGATGCAA CCGTAAACAG CGCATAGTTT GGTAGGCATA
4520
TAACTGAATA TATATATATT ATTATTATTA TGTTTTAACA TTAAGCAAAA AAATAAAAGA
4580
AAAAATTGAG AAAACTTCAA AAAAAAAAAA AAAAA
4615
(2) INFORMATION FOR SEQ ID NO:2:
(i) SEQUENCE CHARACTERISTICS:
(A) LENGTH: 921 amino acids
(B) TYPE: amino acid
(D) TOPOLOGY: linear
(ii) MOLECULE TYPE: protein
(xi) SEQUENCE DESCRIPTION: SEQ ID NO:2:
Met Asn Thr Ser Gln Thr Ala Ala Gly Asn Arg Ile Thr Phe Thr Ser
1 5 10
15
Gln Pro Leu Pro Asn Gly Thr Ile Ser Ile Ala Gly Asn Pro Gly Ala
20 25 30
Val Ile Ser Thr Ala Gln Leu Pro Asn Thr Thr Thr Ile Lys Thr Ile
35 40 45 Gln Ala Gly Ile Gly Gly Gln His Gln Gly Leu Gln Gln Val His His
50 55 60
Val Gln Gln Gln Gln Gln Ser Gln Gln Gln Gln Gln Gln Gln Gln Gln
65 70 75
80
Thr Gln Ser Ala Gly Gln Pro Leu Leu Asn Ser Met Leu Pro Ala Gly 85 90
95
Val Val Val Gly Met Arg Gln Gln Ala Pro Ser Gln Gln Gln Gln Lys
100 105 110
Asn Val Pro Thr Asn Pro Leu Ser Arg Val Val Ile Asn Ser His Met
115 120 125
Ala Gly Val Arg Pro Gln Ser Pro Ser Ile Thr Leu Ser Thr Leu Asn
130 135 140
Thr Gly Gln Thr Pro Ala Leu Leu Val Lys Thr Asp Asn Gly Phe Gln
145 150 155
160
Leu Leu Arg Val Gly Thr Thr Thr Gly Pro Pro Thr Val Thr Gln Thr
165 170 175 Ile Thr Asn Thr Ser Asn Asn Ser Asn Thr Thr Ser Thr Thr Asn His
180 185 190
Pro Thr Thr Thr Gln Ile Arg Leu Gln Thr Val Pro Ala Ala Ala Ser
195 200 205
Met Thr Asn Thr Thr Ala Thr Ser Asn Ile Ile Val Asn Ser Val Ala
210 215 220
Ser Ser Gly Tyr Ala Asn Ser Ser Gln Pro Pro His Leu Thr Gln Leu
225 230 235
240
Asn Ala Gln Ala Pro Gln Leu Pro Gln Ile Thr Gln Ile Gln Thr Ile
245 250 255 Pro Ala Gln Gln Ser Gln Gln Gln Gln Val Asn Asn Val Ser Ser Ala
260 265 270
Gly Gly Thr Ala Thr Ala Val Ser Ser Thr Thr Ala Ala Thr Thr Thr
275 280 285 Gln Gln Gly Asn Thr Lys Glu Lys Cys Arg Lys Phe Leu Ala Asn Leu
290 295 300 Ile Glu Leu Ser Thr Arg Glu Pro Lys Pro Val Glu Lys Asn Val Arg
305 310 315
320
Thr Leu Ile Gln Glu Leu Val Asn Ala Asn Val Glu Pro Glu Glu Phe
325 330 335
Cys Asp Arg Leu Glu Arg Leu Leu Asn Ala Ser Pro Gln Pro Cys Leu
340 345 350 Ile Gly Phe Leu Lys Lys Ser Leu Pro Leu Leu Arg Gln Ala Leu Tyr
355 360 365
Thr Lys Glu Leu Val Ile Glu Gly Ile Lys Pro Pro Pro Gln His Val
370 375 380
Leu Gly Leu Ala Gly Leu Ser Gln Gln Leu Pro Lys Ile Gln Ala Gln
385 390 395
400
Ile Arg Pro Ile Gly Pro Ser Gln Thr Thr Thr Ile Gly Gln Thr Gln
405 410 415
Val Arg Met Ile Thr Pro Asn Ala Leu Gly Thr Pro Arg Pro Thr Ile
420 425 430 Gly His Thr Thr Ile Ser Lys Gln Pro Pro Asn Ile Arg Leu Pro Thr
435 440 445
Ala Pro Arg Leu Val Asn Thr Gly Gly Ile Arg Thr Gln Ile Pro Ser
450 455 460
Leu Gln Val Pro Gly Gln Ala Asn Ile Val Gln Ile Arg Gly Pro Gln
465 470 475
480
His Ala Gln Leu Gln Arg Thr Gly Ser Val Gln Ile Arg Ala Thr Thr
485 490 495
Arg Pro Pro Asn Ser Val Pro Thr Ala Asn Lys Leu Thr Ala Val Lys
500 505 510
Val Gly Gln Thr Gln Ile Lys Ala Ile Thr Pro Ser Leu His Pro Pro
515 520 525
Ser Leu Ala Ala Ile Ser Gly Gly Pro Pro Pro Thr Pro Thr Leu Ser
530 535 540
Val Leu Ser Thr Leu Asn Ser Ala Ser Thr Thr Thr Leu Pro Ile Pro
545 550 555
560
Ser Leu Pro Thr Val His Leu Pro Pro Glu Ala Leu Arg Ala Arg Glu
565 570 575 Gln Met Gln Asn Ser Leu Asn His Asn Ser Asn His Phe Asp Ala Lys
580 585 590
Leu Val Glu Ile Lys Ala Pro Ser Leu His Pro Pro His Met Glu Arg
595 600 605 Ile Asn Ala Ser Leu Thr Pro Ile Gly Ala Lys Thr Met Ala Arg Pro
610 615 620
Pro Pro Ala Ile Asn Lys Ala Ile Gly Lys Lys Lys Arg Asp Ala Met
625 630 635
640
Glu Met Asp Ala Lys Leu Asn Thr Ser Ser Gly Gly Ala Ala Ser Ala
645 650 655
Ala Asn Ser Phe Phe Gln Gln Ser Ser Met Ser Ser Met Tyr Gly Asp
660 665 670
Asp Asp Ile Asn Asp Val Ala Ala Met Gly Gly Val Asn Leu Ala Glu
675 680 685
Glu Ser Gln Arg Ile Leu Gly Cys Thr Glu Asn Ile Gly Thr Gln Ile
690 695 700
Arg Ser Cys Lys Asp Glu Val Phe Leu Asn Leu Pro Ser Leu Gln Ala
705 710 715
720
Arg Ile Arg Ala Ile Thr Ser Glu Ala Gly Leu Asp Glu Pro Ser Gln
725 730 735
Asp Val Ala Val Leu Ile Ser His Ala Cys Gln Glu Arg Leu Lys Asn
740 745 750 Ile Val Glu Lys Leu Ala Val Ile Ala Glu His Arg Ile Asp Val Ile
755 760 765
Lys Leu Asp Pro Arg Tyr Glu Pro Ala Lys Asp Val Arg Gly Gln Ile
770 775 780 Lys Phe Leu Glu Glu Leu Asp Lys Ala Glu Gln Lys Arg His Glu Glu
785 790 795
800
Leu Glu Arg Glu Met Leu Leu Arg Ala Ala Lys Ser Arg Ser Arg Val
805 810 815
Glu Asp Pro Glu Gln Ala Lys Met Lys Ala Arg Ala Lys Glu Met Gln
820 825 830
Arg Ala Glu Met Glu Glu Leu Arg Gln Arg Asp Ala Asn Leu Thr Ala
835 840 845
Leu Gln Ala Ile Gly Pro Arg Lys Lys Leu Lys Leu Asp Gly Glu Thr
850 855 860
Val Ser Ser Gly Ala Gly Ser Ser Gly Gly Gly Val Leu Ser Ser Ser
865 870 875
880
Gly Ser Ala Pro Thr Thr Leu Arg Pro Arg Ile Lys Arg Val Asn Leu
885 890 895
Arg Asp Met Leu Phe Tyr Met Glu Gln Glu Arg Glu Phe Cys Arg Ser
900 905 910
Ser Met Leu Phe Lys Thr Tyr Leu Lys
915 920
(2) INFORMATION FOR SEQ ID NO:3:
(i) SEQUENCE CHARACTERISTICS:
(A) LENGTH: 4164 base pairs
(B) TYPE: nucleic acid
(C) STRANDEDNESS: single
(D) TOPOLOGY: linear
(ii) MOLECULE TYPE: cDNA (xi) SEQUENCE DESCRIPTION: SEQ ID NO:3:
TTCGCTGTAC GAGGTACCCG GTCCGAATTC CAAAAGGGCC AACAACTTCA CCCGTGACTT
60
TCTGCAGGTG TTTATTTACC GCCTGTTCTG GAAAAGTCGC GACAACCCGC CCCGCATTCG
120
AATGGACGAT ATAAAACAGG CTTTTCCCGC TCATTCCGAG AGCAGCATCC GCAAGCGTTT
180
AAAGCAGTGC GCTGACTTCA AGCGAACAGG CATGGACTCC AATTGGTGGG TTATAAAGCC
240
AGAGTTTCGC CTTCCATCCG AGGAGGAGAT CCGAGCCATG GTGTCACCTG AGCAGTGTTG
300
CGGTACTTCA GCATGATAGC GGCGGAACAA CGCTTAAAGG ATGCTGGGTA TGGAGAAAAG
360
TTTTTGTTCG CACCTCAGGA AGATGACGAC GAGGAGGCGC AGTGAAAGCT TGACGACGAA
420
GTAAAGGTGG CTCCTTGGAA CACGACTCGC GCATATATCC AAGCCATGCG GGGAAAGTGT
480
TTACTCCAGT TGAGTGGTCC AGCCGATCCA ACGGGATGTG GAGAGGGATT TTCATATGTT
540
CGAGTGCCAA ACAAGCCCAC GCAAACCAAG GAGGAGCAAG AGTCGCAGCC TAAACGTTCG
600
GTCACAGGAA CAGATGCAGA TTTGCGTCGT CTGCCACTCC AGCGTGCAAA AGAGCTGTTG
660
CGGCAGTTCA AGGTGCCCGA GGAGGAGATC AAAAAGCTTT CCCGCTGGGA GGTCATTGAC
720
GTGGTGCGCA CCCTGTCCAC AGAAAAGGCC AAGGCCGGTG AAGAGGGAAT GGATAAGTTT
780 TCTCGTGGCA ACCGGTTCTC CATTGCAGAG CATCAGGAGC GTTATAAGGA AGAGTGCCAG
840
CGCATATTCG ATCTGCAAAA CAGAGTGCTG GCCAGCTCTG AGGTGCTGTC CACAGATGAG
900
GCAGAGTCCT CGGCCTCTGA GGAATCTGAT CTCGAAGAAC TTGGCAAGAA TCTTGAGAAC
960
ATGCTGTCAA ACAAGAAAAC CTCGACGCAA TTGTCAAGGG AACGTGAAGA GCTGGAGCGT
1020
CAGGAGTTGC TTCGCCAGCT TGACGAAGAA CACGGCGGAC CAAGTGGTAG TGGAGGAGCC
1080
AAGGGAGCCA AAGGAAAGGA TGATCCGGGA CAGCAAATGC TGGCAACCAA CAACCAGGGC
1140
AGGATCCTTC GCATTACGCG TACCTTTAGA GGTAACGATG GCAAGGAATA TACTCGCGTG
1200
GAGACTGTGC GGCGGCAACC AGTTATCGAC GCCTACATCA AGATTCGCAC CACTAAGGAC
1260
GAGCAGTTCA TCAAGCAGTT CGCAACGCTA GATGAGCAGC AGAAGGAGGA GATGAAGCGC
1320
GAAAAGAGAC GCATTCAGGA GCAGCTACGT CGCATCAAGC GCAACCAGGA GCGCGAACGC
1380
CTGGCGCAGC TGGCCCAGAA CCAGAAGCTT CAGCCAGGTG GCATGCCCAC TTCCTTGGGT
1440
GATCCTAAGA GCTCGGGCGG TCATTCGCAC AAGGAGCGGG ATAGCGGCTA CAAGGAGGTC
1500
AGCCCTTCGC GCAAGAAGTT CAAGCTTAAG CCAGACCTAA AGCTGAAGTG CGGCGCCTGT
1560
GGACAGGTTG GTCACATGCG CACAAACAAA GCCTGTCCCT TGTATTCTGG CATGCAAAGC 1620
AGTCTGTCCC AGTCGAACCC ATCTCTGGCT GACGATTTTG ACGAACAGAG CGAAAAGGAG
1680
ATGACAATGG ATGACGATGA TCTTGTGAAT GTCGATGGCA CCAAAGTAAC GCTCAGCAGT
1740
AAGATTCTCA AGCGTCATGG TGGTGATGAT GGCAAGCGTC GCAGCGGATC TAGCTCTGGT
1800
TTCACCTTGA AGGTTCCCCG AGATGCGATG GGCAAGAAGA AACGCAGAGT GGGTGGCGAT
1860
CTTCATTGTG ACTATCTGCA GCGACACAAT AAAACGGCCA ATCGCAGGCG CACGGACCCC
1920
GTTGTGGTAC TGTCCTCTAT CCTGGAGATT ATCCATAATG AGCTGCGATC TATGCCAGAT
1980
GTATCGCCAT TCCTGTTCCC GGTAAGCGCA AAAAAGGTTC CCGACTACTA CCGCGTGGTG
2040
ACCAAGCCCA TGGATCTGCA AACGATGAGG GAGTATATCG CCAAAGGCTA ACACGAGTCG
2100
CGAGATGTTC CTCGAGGATC TCAAGCAGAT TGTGGACAAC TCGCTGATCT ACAATGGACC
2160
GCAGAGTGCA TACACCTTGG CTGCCCAACG CATGTTCAGC AGTTGTTTTG AATTGCTCGC
2220
AGAGGCGAAG ACAAACTGAT GCGCCTCGAG AAGGCAATTA ACCCGCTGCT GGACGACGAT
2280
GACCAAGTGG CACTCTCCTT TATCTTTGAC AAGCTGCACT CGCAGATTAA GCAATTACCA
2340
GAGAGCTGGC CTTTCCTTAA GCCTGTCAAC AAGAAACAGG TTAAGGACTA CTACACGGTT
2400 ATCAAGCGAC CCATGGACCT CGAAACTATC GGCAAAAACA TTGAAGCTCA TCGCTATCAC
2460
AGTCGTGCCG AGTATCTGGC TGATATCGAG TTGATCGCCA CCAACTGTGA GCAGTACAAC
2520
GGCAGTGACA CCCGCTACAC CAAGTTCTCA AAGAAGATAC TTGAGTATGC CCAAACCCAG
2580
TTAATTGAGT TTTCGGAGCA CTGCGGCCAG TTGGAAAATA ACATAGCTAA GACGCAGGAG
2640
CGTGCTAGGG AAAATGCACC AGAGTTTGAT GAAGCCTGGG GCAATGATGA TTACAACTTT
2700
GACCGTGGCA GTAGGGCCAG TTCACCCGGA GATGACTACA TCGACGTCGA GGGTCATGGG
2760
GGGCATGCCT CCTCATCGAA CTCTATCCAT CGCAGCATGG GCGCCGAGGC CGGTTCGTCA
2820
CATACGGCGC CGGCGGTGCG AAAACCAGCT CCTCCTGGTC CTGGTGAGGT GAAGCGCGGA
2880
AGGGGTAGGC CCCGCAAGCA GCGCGACCCC GTGGAGGAGG TCAAATCCCA GAATCCGGTT
2940
AAGCGTGGTC GGGGGCGTCC GAGGAAGGAC AGCCTTGCCT CAAACATGAG TCACACGCAA
3000
GCTTACTTCC TGGATGAAGA TCTCCAATGC TCCACAGATG ACGAGGACGA CGACGAGGAG
3060
GAGGACTTCC AGGAGGTCTC CGAAGACGAG AACAATGCGG CGAGCATTTT AGATCAGGGC
3120
GAACGTATCA ATGCGCCTGC CGATGCCATG GATGGCATGT TTGACCCCAA GAACATCAAG
3180
ACAGAGATTG ACCTAGAGGC TCACCAGATG GCAGAGGAGC CGATCGGCGA GGATGACAGC 3240
CAGCAGGTGG CCGAAGCAAT GGTGCAGTTG AGTGGCGTGG GCGGCTACTA TGCTCAACAG
3300
CAGCAAGATG AATCCATGGA TGTGGACCCC AACTACGATC CCTCAGATTT CCTCGCCATG
3360
CACAAGCAGC GCCAGAGCCT CGGCGAGCCC AGCAGCTTGC AGGGTGCTTT CACCAACTTC
3420
CTATCGCACG AGCAGGATGA TAATGGGCCT TACAATCCCG CCGAAGCCAG CACAAGTGCC
3480
GCTTCCGGTG CAGACTTAGG AATGGACGCT TCAATGGCCA TGCAAATGGC GCCGGAAATG
3540
CCTGTCAATA CCATGAACAA CGGAATGGGC ATCGATGATG ATCTGGATAT TTCGGAGAGT
3600
GACGAGGAAG ACGATGGTTC TCGAGTGCGT ATCAAAAAGG AGGTCTTCGA CGACGGGGAT
3660
TACGCCTTGC AGCACCAGCA GATGGGACAG GCAGCATCGC AGTCGCAGAT ATACATGGGG
3720
ATTCGTCCAA CGAGCCCACG ACTCTCGACT ACCAGCAACC ACCGCAACTG GACTTCCAAC
3780
AAGTGCAGGA AATGGAGCAG TTGCAGCACC AAGTGATGCC ACCAATGCAA TCAGAGCAAC
3840
TGCAGCAGCA ACAGACGCCG CAGGAGACAA TGATTATGCC TGGACTTTTT AGTGATAGGG
3900
Figure imgf000068_0001
AATAATTGTT AGTTGTTAGA AAATAAAACG TCGATTTAAT AATAGGATTG AGCTTCGCTG
3960
TGAAACAATT TTATACACTT TTTACAATGC ATTGTTTTAA CGGATTTTGA AATACTACAA
4020 TATGTTCTCT GAAAAAATAT TTCCTTTTCA TGCCAATATG TTTTTAATTT TACACTTTAC
4080
AATTTATGAA ATCTAATTCA AAATATGTTT TTAAAATATA ATTTTCATAA CTTTAAATAA
4140
TGCCTAGAAA AAAAAAAAAA AAAA
4164
(2) INFORMATION FOR SEQ ID NO: 4:
(i) SEQUENCE CHARACTERISTICS:
(A) LENGTH: 2359 base pairs
(B) TYPE: nucleic acid
(C) STRANDEDNESS: single
(D) TOPOLOGY: linear
(ii) MOLECULE TYPE: cDNA
(ix) FEATURE:
(A) NAME/KEY: CDS
(B) LOCATION: 49..2160
(xi) SEQUENCE DESCRIPTION: SEQ ID NO:4:
GATAACAAAA TAGTACACAA GTTCCATATA TTTCAATTTT CCGCGAAA ATG AGC CTG
57
Met Ser Leu
1
GAA GTG AGC AAT ATC AAC GGG GGA AAC GGT ACT CAA TTG TCC CAC GAC
105
Glu Val Ser Asn Ile Asn Gly Gly Asn Gly Thr Gln Leu Ser His Asp
5 10 15
AAG CGT GAG CTG CTA TGC CTG CTG AAA CTC ATC AAA AAG TAC CAG CTG
153
Lys Arg Glu Leu Leu Cys Leu Leu Lys Leu Ile Lys Lys Tyr Gln Leu
20 25 30
35 AAG AGC ACT GAG GAG CTG CTC TGC CAA GAG GCG AAT GTG AGC AGT GTG
201
Lys Ser Thr Glu Glu Leu Leu Cys Gln Glu Ala Asn Val Ser Ser Val
40 45
50
GAA TTG TCG GAA ATC AGC GAA AGT GAT GTT CAG CAG GTG CTG GGC GCA
249
Glu Leu Ser Glu Ile Ser Glu Ser Asp Val Gln Gln Val Leu Gly Ala
55 60 65
GTT TTG GGA GCT GGC GAT GCC AAC CGG GAG CGG AAA CAT GTC CAA TCT
297
Val Leu Gly Ala Gly Asp Ala Asn Arg Glu Arg Lys His Val Gln Ser
70 75 80
CCG GCG CAG GGT CAT AAA CAG TCC GCG GTG ACG GAG GCC AAT GCT GCA
345
Pro Ala Gln Gly His Lys Gln Ser Ala Val Thr Glu Ala Asn Ala Ala
85 90 95
GAG GAA CTG GCC AAG TTC ATC GAC GAC GAC AGC TTT GAT GCT CAG CAC
393
Glu Glu Leu Ala Lys Phe Ile Asp Asp Asp Ser Phe Asp Ala Gln His
100 105 110
115
TAT GAG CAG GCA TAC AAG GAG CTG CGC ACT TTC GTT GAG GAC TCC CTG
441
Tyr Glu Gln Ala Tyr Lys Glu Leu Arg Thr Phe Val Glu Asp Ser Leu
120 125 130
GAC ATA TAC AAG CAT GAG CTG TCC ATG GTT CTG TAC CCA ATT CTG GTG
489
Asp Ile Tyr Lys His Glu Leu Ser Met Val Leu Tyr Pro Ile Leu Val 135 140 145
CAG ATC TAC TTC AAG ATC CTC GCC AGT GGA CTA AGG GAG AAG GCC AAA
537
Gln Ile Tyr Phe Lys Ile Leu Ala Ser Gly Leu Arg Glu Lys Ala Lys
150 155 160
GAA TTC ATT GAG AAG TAC AAA TGC GAT CTC GAC GGC TAC TAC ATA GAG
585
Glu Phe Ile Glu Lys Tyr Lys Cys Asp Leu Asp Gly Tyr Tyr Ile Glu
165 170 175
GGT CTT TTC AAC CTT CTT TTG CTG TCT AAG CCC GAG GAG CTG CTG GAG
633
Gly Leu Phe Asn Leu Leu Leu Leu Ser Lys Pro Glu Glu Leu Leu Glu
180 185 190
195
AAT GAC CTC GTA GTA GCC ATG GAG CAG GAT AAG TTT GTC ATT CGC ATG
681
Asn Asp Leu Val Val Ala Met Glu Gln Asp Lys Phe Val Ile Arg Met
200 205 210
TCC AGG GAC TCG CAC TCT CTG TTC AAG CGA CAC ATT CAG GAT CGC CGG
729
Ser Arg Asp Ser His Ser Leu Phe Lys Arg His Ile Gln Asp Arg Arg
215 220 225
CAG GAA GTG GTG GCA GAT ATT GTT TCC AAG TAC TTG CAT TTC GAC ACA
777
Gln Glu Val Val Ala Asp Ile Val Ser Lys Tyr Leu His Phe Asp Thr
230 235 240
TAC GAG GGC ATG GCG CGC AAC AAG CTG CAG TGC GTC GCC ACC GCG GGC
825 Tyr Glu Gly Met Ala Arg Asn Lys Leu Gln Cys Val Ala Thr Ala Gly
245 250 255
TCG CAC CTC GGA GAG GCC AAG CGA CAG GAC AAC AAA ATG CGG GTG TAC
873
Ser His Leu Gly Glu Ala Lys Arg Gln Asp Asn Lys Met Arg Val Tyr
260 265 270
275
TAC GGA CTG CTC AAG GAG GTG GAC TTT CAG ACT CTG ACC ACT CCA GCG
921
Tyr Gly Leu Leu Lys Glu Val Asp Phe Gln Thr Leu Thr Thr Pro Ala
280 285 290
CCG GCA CCA GAG GAG GAG GAC GAT GAT CCG GAT GCC CCG GAT CGT CCG
969
Pro Ala Pro Glu Glu Glu Asp Asp Asp Pro Asp Ala Pro Asp Arg Pro
295 300 305
AAA AAG AAA AAG CCA AAA AAG GAT CCC CTG CTG TCG AAA AAG TCC AAG
1017
Lys Lys Lys Lys Pro Lys Lys Asp Pro Leu Leu Ser Lys Lys Ser Lys
310 315 320
TCG GAT CCG AAT GCT CCA TCC ATC GAC AGA ATT CCC CTG CCG GAA CTG
1065
Ser Asp Pro Asn Ala Pro Ser Ile Asp Arg Ile Pro Leu Pro Glu Leu
325 330 335
AAG GAT TCG GAC AAG TTG CTA AAG CTT AAG GCT CTC AGG GAA GCC AGC
1113
Lys Asp Ser Asp Lys Leu Leu Lys Leu Lys Ala Leu Arg Glu Ala Ser
340 345 350
355 AAG CGT TTA GCC CTC AGC AAG GAT CAA CTG CCC TCT GCC GTC TTC TAC
1161
Lys Arg Leu Ala Leu Ser Lys Asp Gln Leu Pro Ser Ala Val Phe Tyr
360 365 370
ACG GTG CTT AAT TCC CAT CAG GGC GTA ACC TGT GCC GAG ATT TCA GAC
1209
Thr Val Leu Asn Ser His Gln Gly Val Thr Cys Ala Glu Ile Ser Asp
375 380 385
GAT TCC ACG ATG TTG GCC TGT GGA TTT GGC GAT TCT AGC GTG AGG ATT
1257
Asp Ser Thr Met Leu Ala Cys Gly Phe Gly Asp Ser Ser Val Arg Ile
390 395 400
TGG TCA TTG ACG CCC GCG AAG CTG CGT ACG CTG AAG GAT GCA GAT TCC
1305
Trp Ser Leu Thr Pro Ala Lys Leu Arg Thr Leu Lys Asp Ala Asp Ser
405 410 415
CTT CGC GAA CTG GAC AAG GAA TCG GCG GAT ATC AAT GTG CGT ATG CTG
1353
Leu Arg Glu Leu Asp Lys Glu Ser Ala Asp Ile Asn Val Arg Met Leu
420 425 430
435
GAT GAC CGA AGT GGT GAG GTA ACC AGG AGC TTA ATG GGT CAC ACC GGA
1401
Asp Asp Arg Ser Gly Glu Val Thr Arg Ser Leu Met Gly His Thr Gly
440 445 450
CCC GTA TAC CGC TGT GCC TTT GCC CCC GAG ATG AAC CTG TTG CTC TCA
1449
Pro Val Tyr Arg Cys Ala Phe Ala Pro Glu Met Asn Leu Leu Leu Ser 455 460 465
TGT TCC GAG GAC AGC ACC ATA AGG CTG TGG TCT CTG CTC ACC TGG TCC
1497
Cys Ser Glu Asp Ser Thr Ile Arg Leu Trp Ser Leu Leu Thr Trp Ser
470 475 480
TGC GTA GTC ACC TAC CGC GGG CAC GTT TAC CCG GTG TGG GAT GTT CGC
1545
Cys Val Val Thr Tyr Arg Gly His Val Tyr Pro Val Trp Asp Val Arg
485 490 495
TTT GCG CCG CAT GGC TAC TAT TTT GTT TCT TGT TCG TAC GAC AAA ACT
1593
Phe Ala Pro His Gly Tyr Tyr Phe Val Ser Cys Ser Tyr Asp Lys Thr
500 505 510
515
GCT CGT CTG TGG GCC ACG GAT TCC AAT CAA GCG TTG CGC GTA TTC GTG
1641
Ala Arg Leu Trp Ala Thr Asp Ser Asn Gln Ala Leu Arg Val Phe Val
520 525 530
GGT CAC TTG TCG GAC GTG GAT TGT GTA CAA TTT CAT CCC AAT TCC AAT
1689
Gly His Leu Ser Asp Val Asp Cys Val Gln Phe His Pro Asn Ser Asn
535 540 545
TAT GTG GCC ACC GGT TCT AGC GAT CGC ACG GTA CGC CTG TGG GAC AAC
1737
Tyr Val Ala Thr Gly Ser Ser Asp Arg Thr Val Arg Leu Trp Asp Asn
550 555 560
ATG ACC GGT CAG TCG GTA CGC CTG ATG ACG GGC CAC AAG GGA TCG GTG
1785 Met Thr Gly Gln Ser Val Arg Leu Met Thr Gly His Lys Gly Ser Val
565 570 575
AGT TCT CTG GCC TTC TCC GCC TGC GGC CGG TAT CTG GCC TCG GGT TCA
1833
Ser Ser Leu Ala Phe Ser Ala Cys Gly Arg Tyr Leu Ala Ser Gly Ser
580 585 590
595
GTA GAT CAC AAT ATC ATC ATC TGG GAT CTG TCG AAC GGA TCC CTG GTC
1881
Val Asp His Asn Ile Ile Ile Trp Asp Leu Ser Asn Gly Ser Leu Val
600 605 610
ACC ACC CTG TTG AGG CAC ACT AGC ACT GTG ACC ACG ATC ACC TTT AGT
1929
Thr Thr Leu Leu Arg His Thr Ser Thr Val Thr Thr Ile Thr Phe Ser
615 620 625
CGC GAT GGA ACA GTC CTG GCT GCA GCC GGC TTG GAT AAC AAT CTA ACT
1977
Arg Asp Gly Thr Val Leu Ala Ala Ala Gly Leu Asp Asn Asn Leu Thr
630 635 640
CTG TGG GAC TTT CAC AAG GTT ACC GAA GAC TAT ATC AGC AAT CAC ATC
2025
Leu Trp Asp Phe His Lys Val Thr Glu Asp Tyr Ile Ser Asn His Ile
645 650 655
ACT GTG TCG CAC CAT CAG GAT GAG AAC GAC GAG GAC GTC TAC CTC ATG
2073
Thr Val Ser His His Gln Asp Glu Asn Asp Glu Asp Val Tyr Leu Met
660 665 670
675 CGT ACT TTC CCC AGC AAG AAC TCG CCA TTT GTC AGC CTG CAC TTT ACG
2121
Arg Thr Phe Pro Ser Lys Asn Ser Pro Phe Val Ser Leu His Phe Thr
680 685 690
CGC CGA AAT CTC CTG ATG TGC GTG GGT CTA TTC AAG AGT TAGGAGCACA
2170
Arg Arg Asn Leu Leu Met Cys Val Gly Leu Phe Lys Ser
695 700
GATAAGCTTA TTTGGTATAC GTAATGTAGT GTTAAGGAAT GCTCGGAATG TTTAGGATTA
2230
ATGTTTTGTA TTTCGTTTGT GACCCATCCC CCCTGAAATG TCGATTAGTT GTTTAAGCAT
2290
AAAAGTGTAA AGTGCATATA TGCGCAAGTT ATCAATAAAT TTTAATTAAT ATAAAAGTCA
2350
AAAAAAAAA
2359
(2) INFORMATION FOR SEQ ID NO:5:
(i) SEQUENCE CHARACTERISTICS:
(A) LENGTH: 704 amino acids
(B) TYPE: amino acid
(D) TOPOLOGY: linear
(ii) MOLECULE TYPE: protein
(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 5:
Met Ser Leu Glu Val Ser Asn Ile Asn Gly Gly Asn Gly Thr Gln Leu
1 5 10
15
Ser His Asp Lys Arg Glu Leu Leu Cys Leu Leu Lys Leu Ile Lys Lys
20 25 30 Tyr Gln Leu Lys Ser Thr Glu Glu Leu Leu Cys Gln Glu Ala Asn Val
35 40 45
Ser Ser Val Glu Leu Ser Glu Ile Ser Glu Ser Asp Val Gln Gln Val
50 55 60
Leu Gly Ala Val Leu Gly Ala Gly Asp Ala Asn Arg Glu Arg Lys His
65 70 75
80
Val Gln Ser Pro Ala Gln Gly His Lys Gln Ser Ala Val Thr Glu Ala
85 90
95
Asn Ala Ala Glu Glu Leu Ala Lys Phe Ile Asp Asp Asp Ser Phe Asp
100 105 110
Ala Gln His Tyr Glu Gln Ala Tyr Lys Glu Leu Arg Thr Phe Val Glu
115 120 125
Asp Ser Leu Asp Ile Tyr Lys His Glu Leu Ser Met Val Leu Tyr Pro
130 135 140 Ile Leu Val Gln Ile Tyr Phe Lys Ile Leu Ala Ser Gly Leu Arg Glu
145 150 155
160
Lys Ala Lys Glu Phe Ile Glu Lys Tyr Lys Cys Asp Leu Asp Gly Tyr
165 170 175
Tyr Ile Glu Gly Leu Phe Asn Leu Leu Leu Leu Ser Lys Pro Glu Glu
180 185 190
Leu Leu Glu Asn Asp Leu Val Val Ala Met Glu Gln Asp Lys Phe Val
195 200 205 lle Arg Met Ser Arg Asp Ser His Ser Leu Phe Lys Arg His lle Gln
210 215 220
Asp Arg Arg Gln Glu Val Val Ala Asp Ile Val Ser Lys Tyr Leu His
225 230 235
240
Phe Asp Thr Tyr Glu Gly Met Ala Arg Asn Lys Leu Gln Cys Val Ala
245 250 255
Thr Ala Gly Ser His Leu Gly Glu Ala Lys Arg Gln Asp Asn Lys Met
260 265 270
Arg Val Tyr Tyr Gly Leu Leu Lys Glu Val Asp Phe Gln Thr Leu Thr
275 280 285
Thr Pro Ala Pro Ala Pro Glu Glu Glu Asp Asp Asp Pro Asp Ala Pro
290 295 300
Asp Arg Pro Lys Lys Lys Lys Pro Lys Lys Asp Pro Leu Leu Ser Lys
305 310 315
320
Lys Ser Lys Ser Asp Pro Asn Ala Pro Ser Ile Asp Arg Ile Pro Leu
325 330 335
Pro Glu Leu Lys Asp Ser Asp Lys Leu Leu Lys Leu Lys Ala Leu Arg
340 345 350
Glu Ala Ser Lys Arg Leu Ala Leu Ser Lys Asp Gln Leu Pro Ser Ala
355 360 365
Val Phe Tyr Thr Val Leu Asn Ser His Gln Gly Val Thr Cys Ala Glu
370 375 380 Ile Ser Asp Asp Ser Thr Met Leu Ala Cys Gly Phe Gly Asp Ser Ser
385 390 395
400
Val Arg Ile Trp Ser Leu Thr Pro Ala Lys Leu Arg Thr Leu Lys Asp
405 410 415
Ala Asp Ser Leu Arg Glu Leu Asp Lys Glu Ser Ala Asp Ile Asn Val
420 425 430
Arg Met Leu Asp Asp Arg Ser Gly Glu Val Thr Arg Ser Leu Met Gly
435 440 445
His Thr Gly Pro Val Tyr Arg Cys Ala Phe Ala Pro Glu Met Asn Leu
450 455 460
Leu Leu Ser Cys Ser Glu Asp Ser Thr Ile Arg Leu Trp Ser Leu Leu
465 470 475
480
Thr Trp Ser Cys Val Val Thr Tyr Arg Gly His Val Tyr Pro Val Trp
485 490 495
Asp Val Arg Phe Ala Pro His Gly Tyr Tyr Phe Val Ser Cys Ser Tyr
500 505 510
Asp Lys Thr Ala Arg Leu Trp Ala Thr Asp Ser Asn Gln Ala Leu Arg
515 520 525
Val Phe Val Gly His Leu Ser Asp Val Asp Cys Val Gln Phe His Pro
530 535 540
Asn Ser Asn Tyr Val Ala Thr Gly Ser Ser Asp Arg Thr Val Arg Leu
545 550 555
560 Trp Asp Asn Met Thr Gly Gln Ser Val Arg Leu Met Thr Gly His Lys
565 570 575
Gly Ser Val Ser Ser Leu Ala Phe Ser Ala Cys Gly Arg Tyr Leu Ala
580 585 590
Ser Gly Ser Val Asp His Asn Ile Ile Ile Trp Asp Leu Ser Asn Gly
595 600 605
Ser Leu Val Thr Thr Leu Leu Arg His Thr Ser Thr Val Thr Thr Ile
610 615 620
Thr Phe Ser Arg Asp Gly Thr Val Leu Ala Ala Ala Gly Leu Asp Asn
625 630 635
640
Asn Leu Thr Leu Trp Asp Phe His Lys Val Thr Glu Asp Tyr Ile Ser
645 650 655
Asn His Ile Thr Val Ser His His Gln Asp Glu Asn Asp Glu Asp Val
660 665 670
Tyr Leu Met Arg Thr Phe Pro Ser Lys Asn Ser Pro Phe Val Ser Leu
675 680 685
His Phe Thr Arg Arg Asn Leu Leu Met Cys Val Gly Leu Phe Lys Ser
690 695 700
(2) INFORMATION FOR SEQ ID NO:6:
(i) SEQUENCE CHARACTERISTICS:
(A) LENGTH: 2018 base pairs
(B) TYPE: nucleic acid
(C) STRANDEDNESS : single
(D) TOPOLOGY: linear (ii) MOLECULE TYPE: cDNA
(ix) FEATURE:
(A) NAME/KEY: CDS
(B) LOCATION: 70..1842
(Xi) SEQUENCE DESCRIPTION: SEQ ID NO:6:
GGAATTCGAG TTGGCCAAAG TGGCGCAATC CGGTATCAAT TGTTCAAACC GAGCAGCCCC
60
TCCAGCAGC ATG CTG TAC GGC TCC AGC ATC TCG GCG GAG TCC ATG AAG
108
Met Leu Tyr Gly Ser Ser lle Ser Ala Glu Ser Met Lys
1 5 10
GTG ATC GCG GAG AGC ATC GGA GTG GGC TCC CTG TCG GAT GAC GCC GCC
156
Val Ile Ala Glu Ser Ile Gly Val Gly Ser Leu Ser Asp Asp Ala Ala
15 20 25
AAG GAA CTA GCG GAG GAT GTG TCC ATC AAG CTG AAG AGG ATT GTA CAG
204
Lys Glu Leu Ala Glu Asp Val Ser Ile Lys Leu Lys Arg Ile Val Gln
30 35 40
45
GAT GCG GCC AAG TTC ATG AAC CAC GCC AAG CGG CAG AAG CTC TCA GTG
252
Asp Ala Ala Lys Phe Met Asn His Ala Lys Arg Gln Lys Leu Ser Val
50 55
60
CGG GAC ATC GAC ATG TCC CTT AAG GTG CGA AAT GTG GAG CCG CAG TAC
300
Arg Asp Ile Asp Met Ser Leu Lys Val Arg Asn Val Glu Pro Gln Tyr
65 70 75 GGT TTC GTA GCC AAG GAC TTC ATT CCA CTC CGC TTC GCA TCT GGC GGA
348
Gly Phe Val Ala Lys Asp Phe Ile Pro Leu Arg Phe Ala Ser Gly Gly
80 85 90
GGA CGG GAG CTG CAC TTC ACC GAG GAC AAG GAA ATC GAC CTA GGA GAA
396
Gly Arg Glu Leu His Phe Thr Glu Asp Lys Glu Ile Asp Leu Gly Glu
95 100 105
ATC ACA TCC ACC AAC TCT GTA AAA ATT CCC CTG GAT CTC ACC CTG CGC
444
Ile Thr Ser Thr Asn Ser Val Lys Ile Pro Leu Asp Leu Thr Leu Arg
110 115 120
125
TCC CAT TGG TTT GTT GTG GAG GGA GTG CAA CCC ACT GTG CCC GAA AAC
492
Ser His Trp Phe Val Val Glu Gly Val Gln Pro Thr Val Pro Glu Asn
130 135 140
CCC CCT CCG CTC TCG AAG GAT TCC CAG TTA CTG GAC TCG GTC AAT CCA
540
Pro Pro Pro Leu Ser Lys Asp Ser Gln Leu Leu Asp Ser Val Asn Pro
145 150 155
GTT ATT AAG ATG GAT CAA GGC CTA AAC AAA GAT GCG GCA GGC AAA CCC
588
Val Ile Lys Met Asp Gln Gly Leu Asn Lys Asp Ala Ala Gly Lys Pro
160 165 170
ACC ACC GGC AAG ATA CAC AAG CTG AAA AAC GTG GAG ACC ATT CAT GTC
636
Thr Thr Gly Lys Ile His Lys Leu Lys Asn Val Glu Thr Ile His Val 175 180 185
AAG CAA CTG GCC ACG CAC GAG TTG TCC GTG GAG CAG CAG TTG TAC TAC
684
Lys Gln Leu Ala Thr His Glu Leu Ser Val Glu Gln Gln Leu Tyr Tyr
190 195 200
205
AAG GAG ATC ACC GAG GCG TGC GTG GGA TCT GAT GAG CCG CGG CGC GGG
732
Lys Glu Ile Thr Glu Ala Cys Val Gly Ser Asp Glu Pro Arg Arg Gly
210 215 220
GAA GCG CTG CAG TCG CTG GGA TCC GAT CCT GGC CTG CAC GAA ATG CTT
780
Glu Ala Leu Gln Ser Leu Gly Ser Asp Pro Gly Leu His Glu Met Leu
225 230 235
CCC CGC ATG TGC ACC TTC ATT GCC GAG GGA GTT AAG GTC AAT GTG GTT
828
Pro Arg Met Cys Thr Phe Ile Ala Glu Gly Val Lys Val Asn Val Val
240 245 250
CAG AAC AAC TTG GCG TTG CTT ATT TAC CTC ATG CGC ATG GTT CGT GCG
876
Gln Asn Asn Leu Ala Leu Leu Ile Tyr Leu Met Arg Met Val Arg Ala
255 260 265
CTT CTG GAT AAT CCT TCG CTG TTT CTG GAG AAA TAC CTC CAC GAA CTG
924
Leu Leu Asp Asn Pro Ser Leu Phe Leu Glu Lys Tyr Leu His Glu Leu
270 275 280
285
ATA CCC TCG GTG ATG ACG TGC ATT GTG TCC AAA CAG CTG TGT ATG CGC
972 Ile Pro Ser Val Met Thr Cys Ile Val Ser Lys Gln Leu Cys Met Arg
290 295 300
CCC GAG CTG GAC AAT CAC TGG GCC CTG CGA GAC TTT GCC TCC CGA CTG
1020
Pro Glu Leu Asp Asn His Trp Ala Leu Arg Asp Phe Ala Ser Arg Leu
305 310 315
ATG GCT CAA ATC TGC AAG AAC TTC AAT ACC CTA ACC AAC AAT CTG CAA
1068
Met Ala Gln Ile Cys Lys Asn Phe Asn Thr Leu Thr Asn Asn Leu Gln
320 325 330
ACC CGT GTC ACC CGC ATC TTC AGC AAG GCC CTG CAG AAC GAC AAG ACC
1116
Thr Arg Val Thr Arg Ile Phe Ser Lys Ala Leu Gln Asn Asp Lys Thr
335 340 345
CAC CTG TCC TCG CTT TAC GGC TCT ATT GCG GGT CTC TCG GAG CTG GGG
1164
His Leu Ser Ser Leu Tyr Gly Ser Ile Ala Gly Leu Ser Glu Leu Gly
350 355 360
365
GGC GAA GTC ATA AAG GTT TTC ATC ATA CCC CGC CTT AAG TTC ATA TCG
1212
Gly Glu Val Ile Lys Val Phe Ile Ile Pro Arg Leu Lys Phe Ile Ser
370 375 380
GAG CGC ATT GAA CCT CAC CTG CTC GGC ACC TCC ATC AGC AAC ACT GAC
1260
Glu Arg Ile Glu Pro His Leu Leu Gly Thr Ser Ile Ser Asn Thr Asp
385 390 395 AAG ACA GCA GCA GGT CAC ATC CGC GCC ATG CTT CAG AAG TGC TGT CCC
1308
Lys Thr Ala Ala Gly His Ile Arg Ala Met Leu Gln Lys Cys Cys Pro
400 405 410
CCG ATT CTC AGG CAA ATG CTC AGC GCC AGA TAC AGC GGA GGA CTA CAA
1356
Pro Ile Leu Arg Gln Met Leu Ser Ala Arg Tyr Ser Gly Gly Leu Gln
415 420 425
GAA CGA CTT TGG CTT CCT GGG GCC GTC GCT GTG CCA GGC GTA GTC AAA
1404
Glu Arg Leu Trp Leu Pro Gly Ala Val Ala Val Pro Gly Val Val Lys
430 435 440
445
GTT CGA AAT GCG CCC GCC TCA AGC ATT GTA ACC CTG TCA TCC AAC ACT
1452
Val Arg Asn Ala Pro Ala Ser Ser Ile Val Thr Leu Ser Ser Asn Thr
450 455 460
ATC AAC ACG GCA CCC ATC ACG AGT GCA GCA CAA ACA GCA ACA ACC ATC
1500
Ile Asn Thr Ala Pro Ile Thr Ser Ala Ala Gln Thr Ala Thr Thr Ile
465 470 475
GGA CGA GTG TCC ATG CCC ACC ACA CAG AGA CAG GGA AGT CCC GGA GTC
1548
Gly Arg Val Ser Met Pro Thr Thr Gln Arg Gln Gly Ser Pro Gly Val
480 485 490
TCG TCC CTG CCG CAA ATA AGA GCC ATT CAG GCC AAC CAG CCG GCG CAA
1596
Ser Ser Leu Pro Gln Ile Arg Ala Ile Gln Ala Asn Gln Pro Ala Gln 495 500 505
AAG TTT GTG ATA GTC ACC CAG AAC TCG CCG CAG CAG GGC CAG GCG AAG
1644
Lys Phe Val Ile Val Thr Gln Asn Ser Pro Gln Gln Gly Gln Ala Lys
510 515 520
525
GTG GTG CGG CGT GGC AGC TCT CCG CAC AGC GTG GTC CTC TCC GCG GCC
1692
Val Val Arg Arg Gly Ser Ser Pro His Ser Val Val Leu Ser Ala Ala
530 535 540
TCC AAC GCT GCC AGT GCC TCC AAT TCG AAC TCA AGC TCG AGC GGC AGT
1740
Ser Asn Ala Ala Ser Ala Ser Asn Ser Asn Ser Ser Ser Ser Gly Ser
545 550 555
CTA CTA GCG GCT GCA CAG CGG AGC AGC GAG AAT GTG TGT GTT ATT GCC
1788
Leu Leu Ala Ala Ala Gln Arg Ser Ser Glu Asn Val Cys Val Ile Ala
560 565 570
GGT AGC GAA GCG CCA GCA GTT GAT GGT ATA ACA GTT CAA TCT TTC AGA
1836
Gly Ser Glu Ala Pro Ala Val Asp Gly Ile Thr Val Gln Ser Phe Arg
575 580 585
GCA TCC TAGACGCCAA CTCGCTGATC ATTGAGACGG AGATTGTGCG CGCACCGGCC
1892
Ala Ser
590
CGAGCTGGCG GATCTCTCGC ACCTGGAGTA GCCAGCTTAG TTCGTAGTCC ACATTTTGTC
1952 ATATTGTATG CAATAAAATA AAAAATGCGG GTTCCTACCC CAAAAAAATG TAAAAAAAAA
2012
AAAAAA
2018
(2) INFORMATION FOR SEQ ID NO:7:
(i) SEQUENCE CHARACTERISTICS:
(A) LENGTH: 591 amino acids
(B) TYPE: amino acid
(D) TOPOLOGY: linear
(ii) MOLECULE TYPE: protein
(xi) SEQUENCE DESCRIPTION: SEQ ID NO:7:
Met Leu Tyr Gly Ser Ser Ile Ser Ala Glu Ser Met Lys Val Ile Ala
1 5 10
15
Glu Ser Ile Gly Val Gly Ser Leu Ser Asp Asp Ala Ala Lys Glu Leu
20 25 30
Ala Glu Asp Val Ser Ile Lys Leu Lys Arg Ile Val Gln Asp Ala Ala
35 40 45
Lys Phe Met Asn His Ala Lys Arg Gln Lys Leu Ser Val Arg Asp Ile
50 55 60
Asp Met Ser Leu Lys Val Arg Asn Val Glu Pro Gln Tyr Gly Phe Val
65 70 75
80
Ala Lys Asp Phe Ile Pro Leu Arg Phe Ala Ser Gly Gly Gly Arg Glu
85 90
95
Leu His Phe Thr Glu Asp Lys Glu Ile Asp Leu Gly Glu Ile Thr Ser
100 105 110 Thr Asn Ser Val Lys lle Pro Leu Asp Leu Thr Leu Arg Ser His Trp
115 120 125
Phe Val Val Glu Gly Val Gln Pro Thr Val Pro Glu Asn Pro Pro Pro
130 135 140
Leu Ser Lys Asp Ser Gln Leu Leu Asp Ser Val Asn Pro Val Ile Lys
145 150 155
160
Met Asp Gln Gly Leu Asn Lys Asp Ala Ala Gly Lys Pro Thr Thr Gly
165 170 175
Lys Ile His Lys Leu Lys Asn Val Glu Thr Ile His Val Lys Gln Leu
180 185 190
Ala Thr His Glu Leu Ser Val Glu Gln Gln Leu Tyr Tyr Lys Glu Ile
195 200 205
Thr Glu Ala Cys Val Gly Ser Asp Glu Pro Arg Arg Gly Glu Ala Leu
210 215 220 Gln Ser Leu Gly Ser Asp Pro Gly Leu His Glu Met Leu Pro Arg Met
225 230 235
240
Cys Thr Phe Ile Ala Glu Gly Val Lys Val Asn Val Val Gln Asn Asn
245 250 255
Leu Ala Leu Leu Ile Tyr Leu Met Arg Met Val Arg Ala Leu Leu Asp
260 265 270
Asn Pro Ser Leu Phe Leu Glu Lys Tyr Leu His Glu Leu Ile Pro Ser
275 280 285 Val Met Thr Cys Ile Val Ser Lys Gln Leu Cys Met Arg Pro Glu Leu
290 295 300
Asp Asn His Trp Ala Leu Arg Asp Phe Ala Ser Arg Leu Met Ala Gln
305 310 315
320
Ile Cys Lys Asn Phe Asn Thr Leu Thr Asn Asn Leu Gln Thr Arg Val
325 330 335
Thr Arg Ile Phe Ser Lys Ala Leu Gln Asn Asp Lys Thr His Leu Ser
340 345 350
Ser Leu Tyr Gly Ser Ile Ala Gly Leu Ser Glu Leu Gly Gly Glu Val
355 360 365 Ile Lys Val Phe Ile Ile Pro Arg Leu Lys Phe Ile Ser Glu Arg Ile
370 375 380
Glu Pro His Leu Leu Gly Thr Ser Ile Ser Asn Thr Asp Lys Thr Ala
385 390 395
400
Ala Gly His Ile Arg Ala Met Leu Gln Lys Cys Cys Pro Pro Ile Leu
405 410 415
Arg Gln Met Leu Ser Ala Arg Tyr Ser Gly Gly Leu Gln Glu Arg Leu
420 425 430
Trp Leu Pro Gly Ala Val Ala Val Pro Gly Val Val Lys Val Arg Asn
435 440 445
Ala Pro Ala Ser Ser Ile Val Thr Leu Ser Ser Asn Thr Ile Asn Thr
450 455 460 Ala Pro Ile Thr Ser Ala Ala Gln Thr Ala Thr Thr Ile Gly Arg Val
465 470 475
480
Ser Met Pro Thr Thr Gln Arg Gln Gly Ser Pro Gly Val Ser Ser Leu
485 490 495
Pro Gln Ile Arg Ala Ile Gln Ala Asn Gln Pro Ala Gln Lys Phe Val
500 505 510 Ile Val Thr Gln Asn Ser Pro Gln Gln Gly Gln Ala Lys Val Val Arg
515 520 525
Arg Gly Ser Ser Pro His Ser Val Val Leu Ser Ala Ala Ser Asn Ala
530 535 540
Ala Ser Ala Ser Asn Ser Asn Ser Ser Ser Ser Gly Ser Leu Leu Ala
545 550 555
560
Ala Ala Gln Arg Ser Ser Glu Asn Val Cys Val Ile Ala Gly Ser Glu
565 570 575
Ala Pro Ala Val Asp Gly Ile Thr Val Gln Ser Phe Arg Ala Ser
580 585 590
(2) INFORMATION FOR SEQ ID NO:8:
(i) SEQUENCE CHARACTERISTICS:
(A) LENGTH: 1120 base pairs
(B) TYPE: nucleic acid
(C) STRANDEDNESS: single
(D) TOPOLOGY: linear
(ii) MOLECULE TYPE: CDNA
(ix) FEATURE:
(A) NAME/KEY: CDS
(B) LOCATION: 80..913 (xi) SEQUENCE DESCRIPTION: SEQ ID NO:8:
GATATGTACG TGCACAATTT CAATGGAATA AACAATCTTC TTGCAGCAAA GCCGACGTAA
60
ACATAATAAC TATAGAAGT ATG AGC GCA GAG AAG TCC GAT AAG GCC AAG ATC
112
Met Ser Ala Glu Lys Ser Asp Lys Ala Lys Ile
1 5
10
AGT GCC CAA ATC AAG CAC GTG CCG AAG GAC GCG CAG GTG ATC ATG TCC
160
Ser Ala Gln Ile Lys His Val Pro Lys Asp Ala Gln Val Ile Met Ser
15 20 25
ATC CTG AAG GAG CTG AAT GTC CAG GAG TAC GAG CCG CGC GTG GTC AAC
208
Ile Leu Lys Glu Leu Asn Val Gln Glu Tyr Glu Pro Arg Val Val Asn
30 35 40
CAA CTG CTG GAG TTC ACC TTC CGC TAT GTC ACC TGC ATT CTG GAC GAC
256
Gln Leu Leu Glu Phe Thr Phe Arg Tyr Val Thr Cys Ile Leu Asp Asp
45 50 55
GCC AAG GTA TAC GCC AAC CAT GCG CGC AAG AAG ACC ATC GAC TTG GAC
304
Ala Lys Val Tyr Ala Asn His Ala Arg Lys Lys Thr Ile Asp Leu Asp
60 65 70
75
GAC GTG CGT CTG GCC ACC GAG GTT ACG CTG GAC AAG AGC TTC ACC GGG
352
Asp Val Arg Leu Ala Thr Glu Val Thr Leu Asp Lys Ser Phe Thr Gly 80 85
90
CCG TTG GAG CGC CAC GTT CTA GCC AAG GTG GCC GAC GTG CGC AAC AGC
400
Pro Leu Glu Arg His Val Leu Ala Lys Val Ala Asp Val Arg Asn Ser
95 100 105
ATG CCC CTG CCA CCC ATT AAG CCG CAC TGC GGT CTC CGA CTG CCG CCC
448
Met Pro Leu Pro Pro Ile Lys Pro His Cys Gly Leu Arg Leu Pro Pro
110 115 120
GAC CGC TAC TGT CTC ACC GGC GTC AAC TAC AAA CTG CGG GCC ACT AAT
496
Asp Arg Tyr Cys Leu Thr Gly Val Asn Tyr Lys Leu Arg Ala Thr Asn
125 130 135
CAG CCC AAG AAA ATG ACC AAG TCG GCG GTG GAG GGC CGT CCA CTG AAG
544
Gln Pro Lys Lys Met Thr Lys Ser Ala Val Glu Gly Arg Pro Leu Lys
140 145 150
155
ACC GTC GTT AAG CCC GTC TCC AGC GCC AAT GGT CCG AAG AGG CCA CAC
592
Thr Val Val Lys Pro Val Ser Ser Ala Asn Gly Pro Lys Arg Pro His
160 165 170
TCC GTG GTG GCC AAG CAG CAG GTG GTG ACC ATT CCC AAG CCC GTC ATC
640
Ser Val Val Ala Lys Gln Gln Val Val Thr Ile Pro Lys Pro Val Ile
175 180 185
AAG TTT ACC ACC ACT ACG ACA ACG AAA ACG GTG GGC AGC TCC GGC GGA
688 Lys Phe Thr Thr Thr Thr Thr Thr Lys Thr Val Gly Ser Ser Gly Gly
190 195 200
TCT GGG GGC GGC GGT GGT CAG GAG GTT AAG AGC GAG AGC ACC GGC GCC
736
Ser Gly Gly Gly Gly Gly Gln Glu Val Lys Ser Glu Ser Thr Gly Ala
205 210 215
GGC GGA GAT CTC AAG ATG GAG GTG GAC AGC GAT GCG GCG GCC GTG GGC
784
Gly Gly Asp Leu Lys Met Glu Val Asp Ser Asp Ala Ala Ala Val Gly
220 225 230
235
AGC ATC GCT GGC GCA TCC GGT TCG GGA GCA GGA AGT GCC AGC GGA GGA
832
Ser Ile Ala Gly Ala Ser Gly Ser Gly Ala Gly Ser Ala Ser Gly Gly
240 245 250
GGA GGA GGA GGA GGA TCA TCT GGC GTT GGA GTG GCC GTC AAG CGG GAA
880
Gly Gly Gly Gly Gly Ser Ser Gly Val Gly Val Ala Val Lys Arg Glu
255 260 265
CGT GAG GAG GAG GAG TTT GAG TTT GTG ACC AAC TAGCGAAACG ACATCATTTA
933
Arg Glu Glu Glu Glu Phe Glu Phe Val Thr Asn
270 275
CCTTAAATTA ATATTCTTAA ATCAGACCAA AGCACTTGCA TTTGGTTGAG CGAACTGGGG
993
GTCTAAATTT CAACTCGAAT GTGAAGTCCC AAAAACCTTA GTATAGATTC GCCCGTTAAT
1053 CATTATGAAA TCTACGTTTT ATACACAAAT ACAACTACCA GATTTTCATA TTAAAAAAAA
1113
AAAAAAA
1120
(2) INFORMATION FOR SEQ ID NO:9:
(i) SEQUENCE CHARACTERISTICS:
(A) LENGTH: 278 amino acids
(B) TYPE: amino acid
(D) TOPOLOGY: linear
(ii) MOLECULE TYPE: protein
(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 9:
Met Ser Ala Glu Lys Ser Asp Lys Ala Lys Ile Ser Ala Gln Ile Lys
1 5 10
15
His Val Pro Lys Asp Ala Gln Val Ile Met Ser Ile Leu Lys Glu Leu
20 25 30
Asn Val Gln Glu Tyr Glu Pro Arg Val Val Asn Gln Leu Leu Glu Phe
35 40 45
Thr Phe Arg Tyr Val Thr Cys Ile Leu Asp Asp Ala Lys Val Tyr Ala
50 55 60
Asn His Ala Arg Lys Lys Thr Ile Asp Leu Asp Asp Val Arg Leu Ala
65 70 75
80
Thr Glu Val Thr Leu Asp Lys Ser Phe Thr Gly Pro Leu Glu Arg His
85 90
95
Val Leu Ala Lys Val Ala Asp Val Arg Asn Ser Met Pro Leu Pro Pro
100 105 110 Ile Lys Pro His Cys Gly Leu Arg Leu Pro Pro Asp Arg Tyr Cys Leu
115 120 125
Thr Gly Val Asn Tyr Lys Leu Arg Ala Thr Asn Gln Pro Lys Lys Met
130 135 140
Thr Lys Ser Ala Val Glu Gly Arg Pro Leu Lys Thr Val Val Lys Pro
145 150 155
160
Val Ser Ser Ala Asn Gly Pro Lys Arg Pro His Ser Val Val Ala Lys
165 170 175 Gln Gln Val Val Thr Ile Pro Lys Pro Val Ile Lys Phe Thr Thr Thr
180 185 190
Thr Thr Thr Lys Thr Val Gly Ser Ser Gly Gly Ser Gly Gly Gly Gly
195 200 205
Gly Gln Glu Val Lys Ser Glu Ser Thr Gly Ala Gly Gly Asp Leu Lys
210 215 220
Met Glu Val Asp Ser Asp Ala Ala Ala Val Gly Ser Ile Ala Gly Ala
225 230 235
240
Ser Gly Ser Gly Ala Gly Ser Ala Ser Gly Gly Gly Gly Gly Gly Gly
245 250 255
Ser Ser Gly Val Gly Val Ala Val Lys Arg Glu Arg Glu Glu Glu Glu
260 265 270
Phe Glu Phe Val Thr Asn
275
(2) INFORMATION FOR SEQ ID NO:10: (i) SEQUENCE CHARACTERISTICS:
(A) LENGTH: 5962 base pairs
(B) TYPE: nucleic acid
(C) STRANDEDNESS : single
(D) TOPOLOGY: linear
(ii) MOLECULE TYPE: cDNA
(ix) FEATURE:
(A) NAME/KEY: CDS
(B) LOCATION: 14..5692
(xi) SEQUENCE DESCRIPTION: SEQ ID NO:10:
TTATTTCCGG CAT ATG GGA CCC GGC TGC GAT TTG CTG CTG CGG ACA GCA
49
Met Gly Pro Gly Cys Asp Leu Leu Leu Arg Thr Ala
1 5 10
GCT ACC ATC ACT GCT GCC GCC ATC ATG TCA GAC ACG GAC AGC GAC GAA
97
Ala Thr Ile Thr Ala Ala Ala Ile Met Ser Asp Thr Asp Ser Asp Glu
15 20 25
GAT TCC GCT GGA GGC GGC CCA TTT TCT TTA GCG GGT TTC CTT TTC GGC
145
Asp Ser Ala Gly Gly Gly Pro Phe Ser Leu Ala Gly Phe Leu Phe Gly
30 35 40
AAC ATC AAT GGA GCC GGG CAG CTG GAG GGG GAA AGC GTC TTG GAT GAT
193
Asn Ile Asn Gly Ala Gly Gln Leu Glu Gly Glu Ser Val Leu Asp Asp
45 50 55
60
GAA TGT AAG AAG CAC TTG GCA GGC TTG GGG GCT TTG GGG CTG GGC AGC
241
Glu Cys Lys Lys His Leu Ala Gly Leu Gly Ala Leu Gly Leu Gly Ser 65 70
75
CTG ATC ACT GAA CTC ACG GCA AAT GAA GAA TTG ACC GGG ACT GAC GGT
289
Leu Ile Thr Glu Leu Thr Ala Asn Glu Glu Leu Thr Gly Thr Asp Gly
80 85 90
GCC TTG GTA AAT GAT GAA GGG TGG GTT AGG AGT ACA GAA GAT GCT GTG
337
Ala Leu Val Asn Asp Glu Gly Trp Val Arg Ser Thr Glu Asp Ala Val
95 100 105
GAC TAT TCA GAC ATC AAT GAG GTG GCA GAA GAT GAA AGC CGA AGA TAC
385
Asp Tyr Ser Asp Ile Asn Glu Val Ala Glu Asp Glu Ser Arg Arg Tyr
110 115 120
CAG CAG ACG ATG GGG AGC TTG CAG CCC CTT TGC CAC TCA GAT TAT GAT
433
Gln Gln Thr Met Gly Ser Leu Gln Pro Leu Cys His Ser Asp Tyr
Asp
125 ' 135
140
Figure imgf000097_0002
GAA GAT GAC TAT GAT [GCT GAT TGT GAA GAC ATT GAT TGC AAG TTG ATG
481
Glu Asp Asp Tyr Asp Ala Asp Cys Glu Asp Ile Asp Cys Lys Leu Met
145 150 155
CCT CCT CCA CCT CCA CCC CCG GGA CCA ATG AAG AAG GAT AAG GAC CAG
529
Pro Pro Pro Pro Pro Pro Pro Gly Pro Met Lys Lys Asp Lys Asp Gln
160
Figure imgf000097_0001
170
GAT TCT ATT ACT GGT{GTG TCT GAA AAT GGA GAA GGC ATC ATC TTG CCC
577 Asp Ser lle Thr Gly Val Ser Glu Asn Gly Glu Gly Ile lle Leu Pro
175 180 185
TCC ATC ATT GCC CCT TCC TCT TTG GCC TCA}GAG AAA GTG GAC TTC AGT
625
Ser Ile Ile Ala Pro Ser Ser Leu Ala Ser Glu Lys Val Asp Phe Ser
190 195 200
AGT TCC TCT GAC TCA GAA TCT GAG ATG GGA CCT CAG GAA GCA ACA CAG
673
Ser Ser Ser Asp Ser Glu Ser Glu Met Gly Pro Gln Glu Ala Thr Gln
205 210 215
220
GCA GAA TCT GAA GAT GGA AAG CTG ACC CTT CCA TTG GCT GGG ATT ATG
721
Ala Glu Ser Glu Asp Gly Lys Leu Thr Leu Pro Leu Ala Gly Ile Met
225 230 235
CAG CAT GAT GCC ACC AAG CTG TTG CCA AGT GTC ACA GAA CTT TTT CCA
769
Gln His Asp Ala Thr Lys Leu Leu Pro Ser Val Thr Glu Leu Phe Pro
240 245 250
GAA TTT CGA CCT GGA AAG GTG TTA CGT TTT CTA CGT CTT TTT GGA CCA
817
Glu Phe Arg Pro Gly Lys Val Leu Arg Phe Leu Arg Leu Phe Gly Pro
255 260 265
GGG AAG AAT GTC CCA TCT GTT TGG CGG AGT GCT CGG AGA AAG AGG AAG
865
Gly Lys Asn Val Pro Ser Val Trp Arg Ser Ala Arg Arg Lys Arg Lys
270 275 280 AAG AAG CAC CGT GAG CTG ATA CAG GAA GAG CAG ATC CAG GAG GTG GAG
913
Lys Lys His Arg Glu Leu Ile Gln Glu Glu Gln Ile Gln Glu Val Glu
285 290 295
300
TGC TCA GTA GAA TCA GAA GTC AGC CAG AAG TCT TTG TGG AAC TAC GAC
961
Cys Ser Val Glu Ser Glu Val Ser Gln Lys Ser Leu Trp Asn Tyr Asp
305 310 315
TAC GCT CCA CCA CCA CCT CCA GAG CAG TGT CTC TCT GAT GAT GAA ATC
1009
Tyr Ala Pro Pro Pro Pro Pro Glu Gln Cys Leu Ser Asp Asp Glu Ile
320 325 330
ACG ATG ATG GCT CCT GTG GAG TCC AAA TTT TCC CAA TCA ACT GGA GAT
1057
Thr Met Met Ala Pro Val Glu Ser Lys Phe Ser Gln Ser Thr Gly Asp
335 340 345
ATA GAT AAA GTG ACA GAT ACC AAA CCA AGA GTG GCT GAG TGG CGT TAT
1105
Ile Asp Lys Val Thr Asp Thr Lys Pro Arg Val Ala Glu Trp Arg Tyr
350 355 360
GGG CCT GCC CGA CTG TGG TAT GAT ]TG CTG GGT GTC CCT GAA GAT GGC
1153
Gly Pro Ala Arg Leu Trp Tyr Asp Met Leu Gly Val Pro Glu Asp Gly
365 370 375
380
AGT GGG TTT GAC TAT GGC TTC AAA CTG AGA AAG ACA GAA CAT GAA CCT
1201
Ser Gly Phe Asp Tyr Gly Phe Lys Leu Arg Lys Thr Glu His Glu Pro 385 390 395
GTG ATA AAA TCT AGA ATG ATA GAG GAA TTT AGG AAA CTT GAG GAA AAC
1249
Val Ile Lys Ser Arg Met Ile Glu Glu Phe Arg Lys Leu Glu Glu Asn
400 405 410
AAT GGC ACT GAT CTT CTG GCT GAT GAA AAC TTC CTG ATG GTG ACA CAG
1297
Asn Gly Thr Asp Leu Leu Ala Asp Glu Asn Phe Leu Met Val Thr Gln
415 420 425
CTG CAT TGG GAG GAT GAT ATC ATC TGG GAT GGG GAG GAT GTC AAA CAC
1345
Leu His Trp Glu Asp Asp Ile Ile Trp Asp Gly Glu Asp Val Lys His
430 435 440
AAA GGG ACA AAA CCT CAG CGT GCA AGC CTG GCA GGC TGG CTT CCT TCT
1393
Lys Gly Thr Lys Pro Gln Arg Ala Ser Leu Ala Gly Trp Leu Pro Ser
445 450 455
460
AGC ATG ACT AGG AAT GCG ATG GCT TAC AAT GTT CAG CAA GGT TTT GCA
1441
Ser Met Thr Arg Asn Ala Met Ala Tyr Asn Val Gln Gln Gly Phe Ala
465 470 475
GCC ACT CTT GAT GAT GAC AAA CCT TGG TAC TCC ATT TTT CCC ATT GAC
1489
Ala Thr Leu Asp Asp Asp Lys Pro Trp Tyr Ser Ile Phe Pro Ile Asp
480 485 490
AAT GAG GAT CTG GTA TAT GGA CGC TGG GAG GAC AAT ATC ATT TGG GAT
1537 Asn Glu Asp Leu Val Tyr Gly Arg Trp Glu Asp Asn Ile Ile Trp Asp
495 500 505
GCT CAG GCC ATG CCC CGG CTG TTG GAA CCT CCT GTT TTG ACA CTT GAT
1585
Ala Gln Ala Met Pro Arg Leu Leu Glu Pro Pro Val Leu Thr Leu Asp
510 515 520
CCC AAT GAT GAG AAC CTC ATT TTG GAA ATT CCT GAT GAG AAG GAA GAG
1633
Pro Asn Asp Glu Asn Leu Ile Leu Glu Ile Pro Asp Glu Lys Glu Glu
525 530 535
540
GCC ACC TCT AAC TCC CCC TCC AAG GAG AGT AAG AAG GAA TCA TCT CTG
1681
Ala Thr Ser Asn Ser Pro Ser Lys Glu Ser Lys Lys Glu Ser Ser Leu
545 550 555
AAG AAG AGT CGA ATT CTC TTA GGG AAA ACA GGA GTC ATC AAG GAG GAA
1729
Lys Lys Ser Arg Ile Leu Leu Gly Lys Thr Gly Val Ile Lys Glu Glu
560 565 570
CCA CAG CAG AAC ATG TCT CAG CCA GAA GTG AAA GAT CCA TGG AAT CTC
1777
Pro Gln Gln Asn Met Ser Gln Pro Glu Val Lys Asp Pro Trp Asn Leu
575 580 585
TCC AAT GAT GAG TAT TAT TAT CCC AAG CAA CAG GGT CTT CGA GGC ACC
1825
Ser Asn Asp Glu Tyr Tyr Tyr Pro Lys Gln Gln Gly Leu Arg Gly Thr
590 595 600 TTT GGA GGG AAT ATT ATC CAG CAT TCA ATT CCT GCT GTG GAA TTA CGG
1873
Phe Gly Gly Asn Ile Ile Gln His Ser Ile Pro Ala Val Glu Leu Arg
605 610 615
620
CAG CCC TTC TTT CCC ACC CAC ATG GGG CCC ATC AAA CTC CGG CAG TTC
1921
Gln Pro Phe Phe Pro Thr His Met Gly Pro Ile Lys Leu Arg Gln Phe
625 630 635
CAT CGC CCA CCT CTG AAA AAG TAC TCA TTT GGT GCA CTT TCT CAG CCA
1969
His Arg Pro Pro Leu Lys Lys Tyr Ser Phe Gly Ala Leu Ser Gln Pro
640 645 650
GGT CCC CAC TCA GTC CAA CCT TTG CTA AAG CAC ATC AAA AAA AAG GCC
2017
Gly Pro His Ser Val Gln Pro Leu Leu Lys His Ile Lys Lys Lys Ala
655 660 665
AAG ATG AGA GAA CAA GAG AGG CAA GCT TCA GGT GGT GGA GAG ATG TTT
2065
Lys Met Arg Glu Gln Glu Arg Gln Ala Ser Gly Gly Gly Glu Met Phe
670 675 680
TTT ATG CGC ACA CCT CAG GAC CTC ACA GGC AAA GAT GGT GAT CTT ATT
2113
Phe Met Arg Thr Pro Gln Asp Leu Thr Gly Lys Asp Gly Asp Leu Ile
685 690 695
700
CTT GCA GAA TAT AGT GAG GAA AAT GGA CCC TTA ATG ATG CAG GTT GGC
2161
Leu Ala Glu Tyr Ser Glu Glu Asn Gly Pro Leu Met Met Gln Val Gly 705 710 715
ATG GCA ACC AAG ATA AAG AAC TAT TAT AAA CGG AAA CCT GGA AAA GAT
2209
Met Ala Thr Lys Ile Lys Asn Tyr Tyr Lys Arg Lys Pro Gly Lys Asp
720 725 730
CCT GGA GCA CCA GAT TGT AAA TAT GGG GAA ACT GTT TAC TGC CAT ACA
2257
Pro Gly Ala Pro Asp Cys Lys Tyr Gly Glu Thr Val Tyr Cys His Thr
735 740 745
TCT CCT TTC CTG GGT TCT CTC CAT CCT GGC CAA TTG CTG CAA GCA TTT
2305
Ser Pro Phe Leu Gly Ser Leu His Pro Gly Gln Leu Leu Gln Ala Phe
750 755 760
GAG AAC AAC CTT TTT CGT GCT CCA ATT TAT CTT CAT AAG ATG CCA GAA
2353
Glu Asn Asn Leu Phe Arg Ala Pro Ile Tyr Leu His Lys Met Pro Glu
765 770 775
780
ACT GAT TTC TTG ATC ATT CGG ACA AGA CAG GGT TAC TAT ATT CGG GAA
2401
Thr Asp Phe Leu Ile Ile Arg Thr Arg Gln Gly Tyr Tyr Ile Arg Glu
785 790 795
TTA GTG GAT ATT TTT GTG GTT GGC CAG CAG TGT CCC TTG TTT GAA GTT
2449
Leu Val Asp Ile Phe Val Val Gly Gln Gln Cys Pro Leu Phe Glu Val
800 805 810
CCT GGG CCT AAC TCC AAA AGG GCC AAT ACG CAT ATT CGA GAC TTT CTA
2497 Pro Gly Pro Asn Ser Lys Arg Ala Asn Thr His Ile Arg Asp Phe Leu
815 820 825
CAG GTT TTT ATT TAC CGC CTT TTC TGG AAA AGT AAA GAT CGG CCA CGG
2545
Gln Val Phe Ile Tyr Arg Leu Phe Trp Lys Ser Lys Asp Arg Pro Arg
830 835 840
AGG ATA CGA ATG GAA GAT ATA AAA AAA GCC TTT CCT TCC CAT TCA GAA
2593
Arg Ile Arg Met Glu Asp Ile Lys Lys Ala Phe Pro Ser His Ser Glu
845 850 855
860
AGC AGC ATC CGG AAG AGG CTA AAG CTC TGC GCT GAC TTC AAA CGC ACA
2641
Ser Ser Ile Arg Lys Arg Leu Lys Leu Cys Ala Asp Phe Lys Arg Thr
865 870 875
GGG ATG GAC TCA AAC TGG TGG GTG CTT AAG TCT GAT TTT CGT TTA CCA
2689
Gly Met Asp Ser Asn Trp Trp Val Leu Lys Ser Asp Phe Arg Leu Pro
880 885 890
ACG GAA GAA GAG ATC AGA GCT ATG GTG TCA CCA GAG CAG TGC TGT GCT
2737
Thr Glu Glu Glu Ile Arg Ala Met Val Ser Pro Glu Gln Cys Cys Ala
895 900 905
TAT TAT AGC ATG ATA GCT GCA GAG CAA CGA CTG AAG GAT GCT GGC TAT
2785
Tyr Tyr Ser Met Ile Ala Ala Glu Gln Arg Leu Lys Asp Ala Gly Tyr
910 915 920 GGT GAG AAA TCC TTT TTT GCT CCA GAA GAA GAA AAT GAG GAA GAT TTC
2833
Gly Glu Lys Ser Phe Phe Ala Pro Glu Glu Glu Asn Glu Glu Asp Phe
925 930 935
940
CAG ATG AAG ATT GAT GAT GAA GTT CGC ACT GCC CCT TGG AAC ACC ACA
2881
Gln Met Lys Ile Asp Asp Glu Val Arg Thr Ala Pro Trp Asn Thr Thr
945 950 955
AGG GCC TTC ATT GCT GCC ATG AAG GGC AAG TGT CTG CTA GAG GTG ACT
2929
Arg Ala Phe Ile Ala Ala Met Lys Gly Lys Cys Leu Leu Glu Val Thr
960 965 970
GGG GTG GCA GAT CCC ACG GGG TGT GGT GAA GGA TTC TCC TAT GTG AAG
2977
Gly Val Ala Asp Pro Thr Gly Cys Gly Glu Gly Phe Ser Tyr Val Lys
975 980 985
ATT CCA AAC AAA CCA ACA CAG CAG AAG GAT GAT AAA GAA CCG CAG CCA
3025
Ile Pro Asn Lys Pro Thr Gln Gln Lys Asp Asp Lys Glu Pro Gln Pro
990 995 1000
GTG AAG AAG ACA GTG ACA GGA ACA GAT GCA GAC CTT CGT CGC CTT TCC
3073
Val Lys Lys Thr Val Thr Gly Thr Asp Ala Asp Leu Arg Arg Leu Ser
1005 1010 1015
1020
CTG AAA AAT GCC AAG CAA CTT CTA CGT AAA TTT GGT GTG CCT GAG GAA
3121
Leu Lys Asn Ala Lys Gln Leu Leu Arg Lys Phe Gly Val Pro Glu Glu 1025 1030 1035
GAG ATT AAA AAG TTG TCC CGC TGG GAA GTG ATT GAT GTG GTG CGC ACA
3169
Glu Ile Lys Lys Leu Ser Arg Trp Glu Val Ile Asp Val Val Arg Thr
1040 1045 1050
ATG TCA ACA GAA CAG GCT CGT TCT GGA GAG GGG CCC ATG AGT AAA TTT
3217
Met Ser Thr Glu Gln Ala Arg Ser Gly Glu Gly Pro Met Ser Lys Phe
1055 1060 1065
GCC CGT GGA TCA AGG TTT TCT GTG GCT GAG CAT CAA GAG CGT TAC AAA
3265
Ala Arg Gly Ser Arg Phe Ser Val Ala Glu His Gln Glu Arg Tyr Lys
1070 1075 1080
GAG GAA TGT CAG CGC ATC TTT GAC CTA CAG AAC AAG GTT CTG TCA TCA
3313
Glu Glu Cys Gln Arg Ile Phe Asp Leu Gln Asn Lys Val Leu Ser Ser
1085 1090 1095
1100
ACT GAA GTC TTA TCA ACT GAC ACA GAC AGC AGC TCA GCT GAA GAT AGT
3361
Thr Glu Val Leu Ser Thr Asp Thr Asp Ser Ser Ser Ala Glu Asp Ser
1105 1110 1115
GAC TTT GAA GAA ATG GGA AAG AAC ATT GAG AAC ATG TTG CAG AAC AAG
3409
Asp Phe Glu Glu Met Gly Lys Asn Ile Glu Asn Met Leu Gln Asn Lys
1120 1125 1130
AAA ACC AGC TCT CAG CTT TCA CGT GAA CGG GAG GAA CAG GAG CGG AAG
3457 Lys Thr Ser Ser Gln Leu Ser Arg Glu Arg Glu Glu Gln Glu Arg Lys
1135 1140 1145
GAA CTA CAG CGA ATG CTA CTG GCA GCA GGC TCA GCA GCA TCC GGA AAC
3505
Glu Leu Gln Arg Met Leu Leu Ala Ala Gly Ser Ala Ala Ser Gly Asn
1150 1155 1160
AAT CAC AGA GAT GAT GAC ACA GCT TCC GTG ACT AGC CTT AAC TCT TCT
3553
Asn His Arg Asp Asp Asp Thr Ala Ser Val Thr Ser Leu Asn Ser Ser
1165 1170 1175
1180
GCC ACT GGA CGC TGT CTC AAG ATT TAT CGC ACG TTT CGA GAT GAA GAG
3601
Ala Thr Gly Arg Cys Leu Lys Ile Tyr Arg Thr Phe Arg Asp Glu Glu
1185 1190 1195
GGG AAA GAG TAT GTT CGC TGT GAG ACA GTC CGA AAA CCA GCT GTC ATT
3649
Gly Lys Glu Tyr Val Arg Cys Glu Thr Val Arg Lys Pro Ala Val Ile
1200 1205 1210
GAT GCC TAT GTG CGC ATA CGG ACT ACA AAA GAT GAG GAA TTC ATT CGA
3697
Asp Ala Tyr Val Arg Ile Arg Thr Thr Lys Asp Glu Glu Phe Ile Arg
1215 1220 1225
AAA TTT GCC CTT TTT GAT GAA CAA CAT CGG GAA GAG ATG CGA AAA GAA
3745
Lys Phe Ala Leu Phe Asp Glu Gln His Arg Glu Glu Met Arg Lys Glu
1230 1235 1240 CGG CGG AGG ATT CAA GAG CAA CTG AGG CGG CTT AAG AGG AAC CAG GAA
3793
Arg Arg Arg Ile Gln Glu Gln Leu Arg Arg Leu Lys Arg Asn Gln Glu
1245 1250 1255
1260
AAG GAG AAG CTT AAG GGT CCT CCT GAG AAG AAG CCC AAG AAA ATG AAG
3841
Lys Glu Lys Leu Lys Gly Pro Pro Glu Lys Lys Pro Lys Lys Met Lys
1265 1270 1275
GAG CGT CCT GAC CTA AAA CTG AAA TGT GGG GCA TGT GGT GCC ATT GGA
3889
Glu Arg Pro Asp Leu Lys Leu Lys Cys Gly Ala Cys Gly Ala Ile Gly
1280 1285 1290
CAC ATG AGG ACT AAC AAA TTC TGC CCC CTC TAT TAT CAA ACA AAT GCG
3937
His Met Arg Thr Asn Lys Phe Cys Pro Leu Tyr Tyr Gln Thr Asn Ala
1295 1300 1305
CCA CCT TCC AAC CCT GTT GCC ATG ACA GAA GAA CAG GAG GAG GAG TTG
3985
Pro Pro Ser Asn Pro Val Ala Met Thr Glu Glu Gln Glu Glu Glu Leu
1310 1315 1320
GAA AAG ACA GTC ATT CAT AAT GAT AAT GAA GAA CTT ATC AAG GTT GAA
4033
Glu Lys Thr Val Ile His Asn Asp Asn Glu Glu Leu Ile Lys Val Glu
1325 1330 1335
1340
GGG ACC AAA ATT GTC TTG GGG AAA CAG CTA ATT GAG AGT GCG GAT GAG
4081
Gly Thr Lys Ile Val Leu Gly Lys Gln Leu Ile Glu Ser Ala Asp Glu 1345 1350 1355
GTT CGC AGA AAA TCT CTG GTT CTC AAG TTT CCT AAA CAG CAG CTT CCT
4129
Val Arg Arg Lys Ser Leu Val Leu Lys Phe Pro Lys Gln Gln Leu Pro
1360 1365 1370
CCA AAG AAG AAA CGG CGA GTT GGA ACC ACT GTT CAC TGT GAC TAT TTG
4177
Pro Lys Lys Lys Arg Arg Val Gly Thr Thr Val His Cys Asp Tyr Leu
1375 1380 1385
AAT AGA CCT CAT AAG TCC ATC CAC CGG CGC CGC ACA GAC CCT ATG GTG
4225
Asn Arg Pro His Lys Ser Ile His Arg Arg Arg Thr Asp Pro Met Val
1390 1395 1400
ACG CTG TCG TCC ATC TTG GAG TCT ATC ATC AAT GAC ATG AGA GAT CTT
4273
Thr Leu Ser Ser Ile Leu Glu Ser Ile Ile Asn Asp Met Arg Asp Leu
1405 1410 1415
1420
CCA AAT ACA TAC CCT TTC CAC ACT CCA GTC AAT GCA AAG GTT GTA AAG
4321
Pro Asn Thr Tyr Pro Phe His Thr Pro Val Asn Ala Lys Val Val Lys
1425 1430 1435
GAC TAC TAC AAA ATC ATC ACT CGG CCA ATG GAC CTA CAA ACA CTC CGC
4369
Asp Tyr Tyr Lys Ile Ile Thr Arg Pro Met Asp Leu Gln Thr Leu Arg
1440 1445 1450
GAA AAC GTG CGT AAA CGC CTC TAC CCA TCT CGG GAA GAG TTC AGA GAG
4417 Glu Asn Val Arg Lys Arg Leu Tyr Pro Ser Arg Glu Glu Phe Arg Glu
1455 1460 1465
CAT CTG GAG CTA ATT GTG AAA AAT AGT GCA ACC TAC AAT GGG CCA AAA
4465
His Leu Glu Leu Ile Val Lys Asn Ser Ala Thr Tyr Asn Gly Pro Lys
1470 1475 1480
CAC TCA TTG ACT CAG ATC TCT CAA TCC ATG CTG GAT CTC TGT GAT GAA
4513
His Ser Leu Thr Gln Ile Ser Gln Ser Met Leu Asp Leu Cys Asp Glu
1485 1490 1495
1500
AAA CTC AAA GAG AAA GAA GAC AAA TTA GCT CGC TTA GAG AAA GCT ATC
4561
Lys Leu Lys Glu Lys Glu Asp Lys Leu Ala Arg Leu Glu Lys Ala Ile
1505 1510 1515
AAC CCC TTG CTG GAT GAT GAT GAC CAA GTG GCG TTT TCT TTC ATT CTG
4609
Asn Pro Leu Leu Asp Asp Asp Asp Gln Val Ala Phe Ser Phe Ile Leu
1520 1525 1530
GAC AAC ATT GTC ACC CAG AAA ATG ATG GCA GTT CCA GAT TCT TGG CCA
4657
Asp Asn Ile Val Thr Gln Lys Met Met Ala Val Pro Asp Ser Trp Pro
1535 1540 1545
TTT CAT CAC CCA GTT AAT AAG AAA TTT GTT CCA GAT TAT TAC AAA GTG
4705
Phe His His Pro Val Asn Lys Lys Phe Val Pro Asp Tyr Tyr Lys Val
1550 1555 1560 ATT GTC AAT CCA ATG GAT TTA GAG ACC ATA CGT AAG AAC ATC TCC AAG
4753
Ile Val Asn Pro Met Asp Leu Glu Thr Ile Arg Lys Asn Ile Ser Lys
1565 1570 1575
1580
CAC AAG TAT CAG AGT CGG GAG AGC TTT CTG GAT GAT GTA AAC CTT ATT
4801
His Lys Tyr Gln Ser Arg Glu Ser Phe Leu Asp Asp Val Asn Leu Ile
1585 1590 1595
CTG GCC AAC AGT GTT AAG TAT AAT GGA CCT GAG AGT CAG TAT ACT AAG
4849
Leu Ala Asn Ser Val Lys Tyr Asn Gly Pro Glu Ser Gln Tyr Thr Lys
1600 1605 1610
ACT GCC CAG GAG ATT GTG AAC GTC TGT TAC CAG ACA TTG ACT GAG TAT
4897
Thr Ala Gln Glu Ile Val Asn Val Cys Tyr Gln Thr Leu Thr Glu Tyr
1615 1620 1625
GAT GAA CAT TTG ACT CAA CTT GAG AAG GAT ATT TGT ACT GCT AAA GAA
4945
Asp Glu His Leu Thr Gln Leu Glu Lys Asp Ile Cys Thr Ala Lys Glu
1630 1635 1640
GCA GCT TTG GAG GAA GCA GAA TTA GAA AGC CTG GAC CCA ATG ACC CCA
4993
Ala Ala Leu Glu Glu Ala Glu Leu Glu Ser Leu Asp Pro Met Thr Pro
1645 1650 1655
1660
GGG CCC TAC ACG CCT CAG CCT CCT GAT TTG TAT GAT ACC AAC ACA TCC
5041
Gly Pro Tyr Thr Pro Gln Pro Pro Asp Leu Tyr Asp Thr Asn Thr Ser 1665 1670 1675
CTC AGT ATG TCT CGA GAT GCC TCT GTA TTT CAA GAT GAG AGC AAT ATG
5089
Leu Ser Met Ser Arg Asp Ala Ser Val Phe Gln Asp Glu Ser Asn Met
1680 1685 1690
TCT GTC TTG GAT ATC CCC AGT GCC ACT CCA GAA AAG CAG GTA ACA CAG
5137
Ser Val Leu Asp Ile Pro Ser Ala Thr Pro Glu Lys Gln Val Thr Gln
1695 1700 1705
GAA GGT GAA GAT GGA GAT GGT GAT CTT GCA GAT GAA GAG GAA GGA ACT
5185
Glu Gly Glu Asp Gly Asp Gly Asp Leu Ala Asp Glu Glu Glu Gly Thr
1710 1715 1720
GTA CAA CAG CCT CAA GCC AGT GTC CTG TAT GAG GAT TTG CTT ATG TCT
5233
Val Gln Gln Pro Gln Ala Ser Val Leu Tyr Glu Asp Leu Leu Met Ser
1725 1730 1735
1740
GAA GGA GAA GAT GAT GAG GAA GAT GCT GGG AGT GAT GAA GAA GGA GAC
5281
Glu Gly Glu Asp Asp Glu Glu Asp Ala Gly Ser Asp Glu Glu Gly Asp
1745 1750 1755
AAT CCT TTC TCT GCT ATC CAG CTG AGT GAA AGT GGA AGT GAC TCT GAT
5329
Asn Pro Phe Ser Ala Ile Gln Leu Ser Glu Ser Gly Ser Asp Ser Asp
1760 1765 1770
GTG GGA TCT GGT GGA ATA AGA CCC AAA CAA CCC CGC ATG CTT CAG GAG
5377 Val Gly Ser Gly Gly Ile Arg Pro Lys Gln Pro Arg Met Leu Gln Glu
1775 1780 1785
AAC ACA AGG ATG GAC ATG GAA AAT GAA GAA AGC ATG ATG TCC TAT GAG
5425
Asn Thr Arg Met Asp Met Glu Asn Glu Glu Ser Met Met Ser Tyr Glu
1790 1795 1800
GGA GAC GGT GGG GAG GCT TCC CAT GGT TTG GAG GAT AGC AAC ATC AGT
5473
Gly Asp Gly Gly Glu Ala Ser His Gly Leu Glu Asp Ser Asn Ile Ser
1805 1810 1815
1820
TAT GGG AGC TAT GAG GAG CCT GAT CCC AAG TCG AAC ACC CAA GAC ACA
5521
Tyr Gly Ser Tyr Glu Glu Pro Asp Pro Lys Ser Asn Thr Gln Asp Thr
1825 1830 1835
AGC TTC AGC AGC ATC GGT GGG TAT GAG GTA TCA GAG GAG GAA GAA GAT
5569
Ser Phe Ser Ser Ile Gly Gly Tyr Glu Val Ser Glu Glu Glu Glu Asp
1840 1845 1850
GAG GAG GAG GAA GAG CAG CGC TCT GGG CCG AGC GTA CTA AGC CAG GTC
5617
Glu Glu Glu Glu Glu Gln Arg Ser Gly Pro Ser Val Leu Ser Gln Val
1855 1860 1865
CAC CTG TCA GAG GAC GAG GAG GAC AGT GAG GAT TTC CAC TCC ATT GCT
5665
His Leu Ser Glu Asp Glu Glu Asp Ser Glu Asp Phe His Ser Ile Ala
1870 1875 1880 GGG GAC AGT GAC TTG GAC TCT GAT GAA TGAGGCTTCC TTTGGGCCTC
5712
Gly Asp Ser Asp Leu Asp Ser Asp Glu
1885 1890
CTTGGTCAGC CTTCCCTGTT CTCCAGCCTA GGTGGTTCAC CTTTCCCCAA TTTGTTCATA
5772
TTTGTACAGT ATCTGATCCT GAAATCATGA AATTAACTAA CACCTTAGCC TTTTTAAAAG
5832
TAGTAAGTAA ATGATAATAA ATCACCTCTC CTAATCTTCC TGGGGCAATG TCACCCTTTG
5892
ATTTAAAACA AAGCAACCCC CTTTCCCCTA CCACTACGGA AAAGAGCAAG CTCATTTTTC
5952
CGTGTCCTCC
5962
(2) INFORMATION FOR SEQ ID NO:11:
(i) SEQUENCE CHARACTERISTICS:
(A) LENGTH: 1893 amino acids
(B) TYPE: amino acid
(D) TOPOLOGY: linear
(ii) MOLECULE TYPE: protein
(xi) SEQUENCE DESCRIPTION: SEQ ID NO:11:
Met Gly Pro Gly Cys Asp Leu Leu Leu Arg Thr Ala Ala Thr Ile Thr
1 55 10
15
Ala Ala Ala Ile Met Ser Asp Thr Asp Ser Asp Glu Asp Ser Ala Gly
20 25 30
Gly Gly Pro Phe Ser Leu Ala Gly Phe Leu Phe Gly Asn Ile Asn Gly
35 40 45 Ala Gly Gln Leu Glu Gly Glu Ser Val Leu Asp Asp Glu Cys Lys Lys
50 55 60
His Leu Ala Gly Leu Gly Ala Leu Gly Leu Gly Ser Leu Ile Thr Glu
65 70 75
80
Leu Thr Ala Asn Glu Glu Leu Thr Gly Thr Asp Gly Ala Leu Val Asn
85 90
95
Asp Glu Gly Trp Val Arg Ser Thr Glu Asp Ala Val Asp Tyr Ser Asp
100 105 110 Ile Asn Glu Val Ala Glu Asp Glu Ser Arg Arg Tyr Gln Gln Thr Met
115 120 125
Gly Ser Leu Gln Pro Leu Cys His Ser Asp Tyr Asp Glu Asp Asp Tyr
130 135 140
Asp Ala Asp Cys Glu Asp Ile Asp Cys Lys Leu Met Pro Pro Pro Pro
145 150 155
160
Pro Pro Pro Gly Pro Met Lys Lys Asp Lys Asp Gln Asp Ser Ile Thr
165 170 175
Gly Val Ser Glu Asn Gly Glu Gly Ile Ile Leu Pro Ser Ile Ile Ala
180 185 190
Pro Ser Ser Leu Ala Ser Glu Lys Val Asp Phe Ser Ser Ser Ser Asp
195 200 205
Ser Glu Ser Glu Met Gly Pro Gln Glu Ala Thr Gln Ala Glu Ser Glu
210 215 220 Asp Gly Lys Leu Thr Leu Pro Leu Ala Gly Ile Met Gln His Asp Ala
225 230 235
240
Thr Lys Leu Leu Pro Ser Val Thr Glu Leu Phe Pro Glu Phe Arg Pro
245 250 255
Gly Lys Val Leu Arg Phe Leu Arg Leu Phe Gly Pro Gly Lys Asn Val
260 265 270
Pro Ser Val Trp Arg Ser Ala Arg Arg Lys Arg Lys Lys Lys His Arg
275 280 285
Glu Leu Ile Gln Glu Glu Gln Ile Gln Glu Val Glu Cys Ser Val Glu
290 295 300
Ser Glu Val Ser Gln Lys Ser Leu Trp Asn Tyr Asp Tyr Ala Pro Pro
305 310 315
320
Pro Pro Pro Glu Gln Cys Leu Ser Asp Asp Glu Ile Thr Met Met Ala
325 330 335
Pro Val Glu Ser Lys Phe Ser Gln Ser Thr Gly Asp Ile Asp Lys Val
340 345 350
Thr Asp Thr Lys Pro Arg Val Ala Glu Trp Arg Tyr Gly Pro Ala Arg
355 360 365
Leu Trp Tyr Asp Met Leu Gly Val Pro Glu Asp Gly Ser Gly Phe Asp
370 375 380
Tyr Gly Phe Lys Leu Arg Lys Thr Glu His Glu Pro Val Ile Lys Ser
385 390 395
400 Arg Met Ile Glu Glu Phe Arg Lys Leu Glu Glu Asn Asn Gly Thr Asp
405 410 415
Leu Leu Ala Asp Glu Asn Phe Leu Met Val Thr Gln Leu His Trp Glu
420 425 430
Asp Asp Ile Ile Trp Asp Gly Glu Asp Val Lys His Lys Gly Thr Lys
435 440 445
Pro Gln Arg Ala Ser Leu Ala Gly Trp Leu Pro Ser Ser Met Thr Arg
450 455 460
Asn Ala Met Ala Tyr Asn Val Gln Gln Gly Phe Ala Ala Thr Leu Asp
465 470 475
480
Asp Asp Lys Pro Trp Tyr Ser Ile Phe Pro Ile Asp Asn Glu Asp Leu
485 490 495
Val Tyr Gly Arg Trp Glu Asp Asn Ile Ile Trp Asp Ala Gln Ala Met
500 505 510
Pro Arg Leu Leu Glu Pro Pro Val Leu Thr Leu Asp Pro Asn Asp Glu
515 520 525
Asn Leu Ile Leu Glu Ile Pro Asp Glu Lys Glu Glu Ala Thr Ser Asn
530 535 540
Ser Pro Ser Lys Glu Ser Lys Lys Glu Ser Ser Leu Lys Lys Ser Arg
545 550 555
560
Ile Leu Leu Gly Lys Thr Gly Val Ile Lys Glu Glu Pro Gln Gln Asn
565 570 575 Met Ser Gln Pro Glu Val Lys Asp Pro Trp Asn Leu Ser Asn Asp Glu
580 585 590
Tyr Tyr Tyr Pro Lys Gln Gln Gly Leu Arg Gly Thr Phe Gly Gly Asn
595 600 605 Ile Ile Gln His Ser Ile Pro Ala Val Glu Leu Arg Gln Pro Phe Phe
610 615 620
Pro Thr His Met Gly Pro Ile Lys Leu Arg Gln Phe His Arg Pro Pro
625 630 635
640
Leu Lys Lys Tyr Ser Phe Gly Ala Leu Ser Gln Pro Gly Pro His Ser
645 650 655
Val Gln Pro Leu Leu Lys His Ile Lys Lys Lys Ala Lys Met Arg Glu
660 665 670 Gln Glu Arg Gln Ala Ser Gly Gly Gly Glu Met Phe Phe Met Arg Thr
675 680 685
Pro Gln Asp Leu Thr Gly Lys Asp Gly Asp Leu Ile Leu Ala Glu Tyr
690 695 700
Ser Glu Glu Asn Gly Pro Leu Met Met Gln Val Gly Met Ala Thr Lys
705 710 715
720
Ile Lys Asn Tyr Tyr Lys Arg Lys Pro Gly Lys Asp Pro Gly Ala Pro
725 730 735
Asp Cys Lys Tyr Gly Glu Thr Val Tyr Cys His Thr Ser Pro Phe Leu
740 745 750 Gly Ser Leu His Pro Gly Gln Leu Leu Gln Ala Phe Glu Asn Asn Leu
755 760 765
Phe Arg Ala Pro Ile Tyr Leu His Lys Met Pro Glu Thr Asp Phe Leu
770 775 780 Ile Ile Arg Thr Arg Gln Gly Tyr Tyr Ile Arg Glu Leu Val Asp Ile
785 790 795
800
Phe Val Val Gly Gln Gln Cys Pro Leu Phe Glu Val Pro Gly Pro Asn
805 810 815
Ser Lys Arg Ala Asn Thr His Ile Arg Asp Phe Leu Gln Val Phe Ile
820 825 830
Tyr Arg Leu Phe Trp Lys Ser Lys Asp Arg Pro Arg Arg Ile Arg Met
835 840 845
Glu Asp Ile Lys Lys Ala Phe Pro Ser His Ser Glu Ser Ser Ile Arg
850 855 860
Lys Arg Leu Lys Leu Cys Ala Asp Phe Lys Arg Thr Gly Met Asp Ser
865 870 875
880
Asn Trp Trp Val Leu Lys Ser Asp Phe Arg Leu Pro Thr Glu Glu Glu
885 890 895 Ile Arg Ala Met Val Ser Pro Glu Gln Cys Cys Ala Tyr Tyr Ser Met
900 905 910 Ile Ala Ala Glu Gln Arg Leu Lys Asp Ala Gly Tyr Gly Glu Lys Ser
915 920 925 Phe Phe Ala Pro Glu Glu Glu Asn Glu Glu Asp Phe Gln Met Lys Ile
930 935 940
Asp Asp Glu Val Arg Thr Ala Pro Trp Asn Thr Thr Arg Ala Phe Ile
945 950 955
960
Ala Ala Met Lys Gly Lys Cys Leu Leu Glu Val Thr Gly Val Ala Asp
965 970 975
Pro Thr Gly Cys Gly Glu Gly Phe Ser Tyr Val Lys Ile Pro Asn Lys
980 985 990
Pro Thr Gln Gln Lys Asp Asp Lys Glu Pro Gln Pro Val Lys Lys Thr
995 1000 1005
Val Thr Gly Thr Asp Ala Asp Leu Arg Arg Leu Ser Leu Lys Asn Ala
1010 1015 1020
Lys Gln Leu Leu Arg Lys Phe Gly Val Pro Glu Glu Glu Ile Lys Lys
1025 1030 1035
1040
Leu Ser Arg Trp Glu Val Ile Asp Val Val Arg Thr Met Ser Thr Glu
1045 1050 1055 Gln Ala Arg Ser Gly Glu Gly Pro Met Ser Lys Phe Ala Arg Gly Ser
1060 1065 1070
Arg Phe Ser Val Ala Glu His Gln Glu Arg Tyr Lys Glu Glu Cys Gln
1075 1080 1085
Arg Ile Phe Asp Leu Gln Asn Lys Val Leu Ser Ser Thr Glu Val Leu
1090 1095 1100 Ser Thr Asp Thr Asp Ser Ser Ser Ala Glu Asp Ser Asp Phe Glu Glu
1105 1110 1115
1120
Met Gly Lys Asn Ile Glu Asn Met Leu Gln Asn Lys Lys Thr Ser Ser
1125 1130 1135 Gln Leu Ser Arg Glu Arg Glu Glu Gln Glu Arg Lys Glu Leu Gln Arg
1140 1145 1150
Met Leu Leu Ala Ala Gly Ser Ala Ala Ser Gly Asn Asn His Arg Asp
1155 1160 1165
Asp Asp Thr Ala Ser Val Thr Ser Leu Asn Ser Ser Ala Thr Gly Arg
1170 1175 1180
Cys Leu Lys Ile Tyr Arg Thr Phe Arg Asp Glu Glu Gly Lys Glu Tyr
1185 1190 1195
1200
Val Arg Cys Glu Thr Val Arg Lys Pro Ala Val Ile Asp Ala Tyr Val
1205 1210 1215
Arg Ile Arg Thr Thr Lys Asp Glu Glu Phe Ile Arg Lys Phe Ala Leu
1220 1225 1230
Phe Asp Glu Gln His Arg Glu Glu Met Arg Lys Glu Arg Arg Arg Ile
1235 1240 1245 Gln Glu Gln Leu Arg Arg Leu Lys Arg Asn Gln Glu Lys Glu Lys Leu
1250 1255 1260
Lys Gly Pro Pro Glu Lys Lys Pro Lys Lys Met Lys Glu Arg Pro Asp
1265 1270 1275
1280 Leu Lys Leu Lys Cys Gly Ala Cys Gly Ala Ile Gly His Met Arg Thr
1285 1290 1295
Asn Lys Phe Cys Pro Leu Tyr Tyr Gln Thr Asn Ala Pro Pro Ser Asn
1300 1305 1310
Pro Val Ala Met Thr Glu Glu Gln Glu Glu Glu Leu Glu Lys Thr Val
1315 1320 1325 Ile His Asn Asp Asn Glu Glu Leu Ile Lys Val Glu Gly Thr Lys Ile
1330 1335 1340
Val Leu Gly Lys Gln Leu Ile Glu Ser Ala Asp Glu Val Arg Arg Lys
1345 1350 1355
1360
Ser Leu Val Leu Lys Phe Pro Lys Gln Gln Leu Pro Pro Lys Lys Lys
1365 1370 1375
Arg Arg Val Gly Thr Thr Val His Cys Asp Tyr Leu Asn Arg Pro His
1380 1385 1390
Lys Ser Ile His Arg Arg Arg Thr Asp Pro Met Val Thr Leu Ser Ser
1395 1400 1405 Ile Leu Glu Ser Ile Ile Asn Asp Met Arg Asp Leu Pro Asn Thr Tyr
1410 1415 1420
Pro Phe His Thr Pro Val Asn Ala Lys Val Val Lys Asp Tyr Tyr Lys
1425 1430 1435
1440
Ile Ile Thr Arg Pro Met Asp Leu Gln Thr Leu Arg Glu Asn Val Arg
1445 1450 1455 Lys Arg Leu Tyr Pro Ser Arg Glu Glu Phe Arg Glu His Leu Glu Leu
1460 1465 1470 Ile Val Lys Asn Ser Ala Thr Tyr Asn Gly Pro Lys His Ser Leu Thr
1475 1480 1485 Gln Ile Ser Gln Ser Met Leu Asp Leu Cys Asp Glu Lys Leu Lys Glu
1490 1495 1500
Lys Glu Asp Lys Leu Ala Arg Leu Glu Lys Ala Ile Asn Pro Leu Leu
1505 1510 1515
1520
Asp Asp Asp Asp Gln Val Ala Phe Ser Phe Ile Leu Asp Asn Ile Val
1525 1530 1535
Thr Gln Lys Met Met Ala Val Pro Asp Ser Trp Pro Phe His His Pro
1540 1545 1550
Val Asn Lys Lys Phe Val Pro Asp Tyr Tyr Lys Val Ile Val Asn Pro
1555 1560 1565
Met Asp Leu Glu Thr Ile Arg Lys Asn Ile Ser Lys His Lys Tyr Gln
1570 1575 1580
Ser Arg Glu Ser Phe Leu Asp Asp Val Asn Leu Ile Leu Ala Asn Ser
1585 1590 1595
1600
Val Lys Tyr Asn Gly Pro Glu Ser Gln Tyr Thr Lys Thr Ala Gln Glu
1605 1610 1615 Ile Val Asn Val Cys Tyr Gln Thr Leu Thr Glu Tyr Asp Glu His Leu
1620 1625 1630 Thr Gln Leu Glu Lys Asp Ile Cys Thr Ala Lys Glu Ala Ala Leu Glu
1635 1640 1645
Glu Ala Glu Leu Glu Ser Leu Asp Pro Met Thr Pro Gly Pro Tyr Thr
1650 1655 1660
Pro Gln Pro Pro Asp Leu Tyr Asp Thr Asn Thr Ser Leu Ser Met Ser
1665 1670 1675
1680
Arg Asp Ala Ser Val Phe Gln Asp Glu Ser Asn Met Ser Val Leu Asp
1685 1690 1695 Ile Pro Ser Ala Thr Pro Glu Lys Gln Val Thr Gln Glu Gly Glu Asp
1700 1705 1710
Gly Asp Gly Asp Leu Ala Asp Glu Glu Glu Gly Thr Val Gln Gln Pro
1715 1720 1725 Gln Ala Ser Val Leu Tyr Glu Asp Leu Leu Met Ser Glu Gly Glu Asp
1730 1735 1740
Asp Glu Glu Asp Ala Gly Ser Asp Glu Glu Gly Asp Asn Pro Phe Ser
1745 1750 1755
1760
Ala Ile Gln Leu Ser Glu Ser Gly Ser Asp Ser Asp Val Gly Ser Gly
1765 1770 1775
Gly Ile Arg Pro Lys Gln Pro Arg Met Leu Gln Glu Asn Thr Arg Met
1780 1785 1790
Asp Met Glu Asn Glu Glu Ser Met Met Ser Tyr Glu Gly Asp Gly Gly
1795 1800 1805 Glu Ala Ser His Gly Leu Glu Asp Ser Asn Ile Ser Tyr Gly Ser Tyr
1810 1815 1820
Glu Glu Pro Asp Pro Lys Ser Asn Thr Gln Asp Thr Ser Phe Ser Ser
1825 1830 1835
1840
Ile Gly Gly Tyr Glu Val Ser Glu Glu Glu Glu Asp Glu Glu Glu Glu
1845 1850 1855
Glu Gln Arg Ser Gly Pro Ser Val Leu Ser Gln Val His Leu Ser Glu
1860 1865 1870
Asp Glu Glu Asp Ser Glu Asp Phe His Ser Ile Ala Gly Asp Ser Asp
1875 1880 1885
Leu Asp Ser Asp Glu
1890
(2) INFORMATION FOR SEQ ID NO:12:
(i) SEQUENCE CHARACTERISTICS:
(A) LENGTH: 3182 base pairs
(B) TYPE: nucleic acid
(C) STRANDEDNESS: single
(D) TOPOLOGY: linear
(ii) MOLECULE TYPE: cDNA
(ix) FEATURE:
(A) NAME/KEY: CDS
(B) LOCATION: 972..3002
(xi) SEQUENCE DESCRIPTION: SEQ ID NO:12:
CGAGTTTTTT TTTTTTTTTT TTTTACAAGA GCACAAATCC ACATTTATTT ATTGATTTTT
60
CGTTAGTTTA AATCCTTGAG GGGTACAGCA TCACTCGGAT TCTGTGTCCA ATGGCCTTAG
120 CAGGAAGATT GCTTCGGAAT TTGGCACGAA CCATGCCACT GTTTCCATGG GCCCGAGTTA
180
CTTTTCCCCA GATGACTCTG GTTTTGTTTG GTTTGCCGCC AGGAGTGACT GTGTTGTTCT
240
TTGCTTTATA TACATAAGCG CATCTCTTGC CCAAATAGAA TTCTGTTTCA TCTCGGGCGT
300
AAACACCTTC AATTTTAAGA AGAGCTGTGT GCTCCCTTTG GTTCCGGAGA CCCCGCTTAT
360
AGCCAGCAAA AATGGCCTTG GACCACAGCC TTCCAGACAT AGTTCCTTTT AGAAGTCCCG
420
TTCCCAGCAG GCCTCCACAG GAGCCAAGAT GGCGCCGAGC CGGGTGAGCA GCGTCTCGGC
480
TGCCGCTAGA GTTTTCCTGC TCCCCGCGCT CGGGTGGCGG GGGCGGGTCT GAGTGGTACC
540
CCGGAGGAGA CCCTTTGAAG GTCCCTTGTG GGGACTGGAA AGAGGACGGT TGGTTGTGTG
600
TCTGTGCTCG TGGGGACCCC GTGTGTGTGC CTGCATTGGA GAGATGTTGC AGGAGATGGG
660
GTGGGCTCTC TGAACCTCCT TTCGCGCTGC CCGGGGATCT TCGACCTGCT TCTCTGCTGG
720
GATCTCGCTT AAGTTAACCC TTCCCTGGGA CGCCTTCCTG CCGCCTCCAC TGATCTGAGG
780
AGATCCTGTG ACTGTAGCGT GTTTTATGAG CCTTTACTGG CAGAGGGTAC CGCCGGGTAT
840
TGAAGGATTC GTAGGAGTTC GCCAGGGAAG TGGGACACGA CCCCCTCTTG TAAACCCGGC
900
GCCAGGCACA GAGGTCTCGG TCTCTCCACC GGGGGCTTCA TCCTTCCAGG GAGGAGAAGA 960
GGGACTCCAG A ATG GCT GAG GAG AAG AAG CTG AAG CTT AGC AAC ACT GTG
1010
Met Ala Glu Glu Lys Lys Leu Lys Leu Ser Asn Thr Val
1 5 10
CTG CCC TCG GAG TCC ATG AAG GTG GTG GCT GAA TCC ATG GGC ATC GCC
1058
Leu Pro Ser Glu Ser Met Lys Val Val Ala Glu Ser Met Gly Ile Ala
15 20 25
CAG ATT CAG GAG GAG ACC TGC CAG CTG CTA ACG GAT GAG GTC AGC TAC
1106
Gln Ile Gln Glu Glu Thr Cys Gln Leu Leu Thr Asp Glu Val Ser Tyr
30 35 40
45
CGC ATC AAA GAG ATC GCA CAG GAT GCC TTG AAG TTC ATG CAC ATG GGG
1154
Arg Ile Lys Glu Ile Ala Gln Asp Ala Leu Lys Phe Met His Met Gly
50 55
60
AAG CGG CAG AAG CTC ACC ACC AGT GAC ATT GAC TAC GCC TTG AAG CTA
1202
Lys Arg Gln Lys Leu Thr Thr Ser Asp Ile Asp Tyr Ala Leu Lys Leu
65 70 75
AAG AAT GTC GAG CCA CTC TAT GGC TTC CAC GCC CAG GAC TTC ATT CCT
1250
Lys Asn Val Glu Pro Leu Tyr Gly Phe His Ala Gln Asp Phe Ile Pro
80 85 90
TTC CGC TTC GCC TCT GGT GGG GGC CGG GAG CTT TAC TTC TAT GAG GAG 1298
Phe Arg Phe Ala Ser Gly Gly Gly Arg Glu Leu Tyr Phe Tyr Glu Glu
95 100 105
AAG GAG GTT GAT CTG AGC GAC ATC ATC AAT ACC CCT CTG CCC CGG GTG
1346
Lys Glu Val Asp Leu Ser Asp Ile Ile Asn Thr Pro Leu Pro Arg Val
110 115 120
125
CCC CTG GAC GTC TGC CTC AAA GCT CAT TGG CTG AGC ATC GAG GGC TGC
1394
Pro Leu Asp Val Cys Leu Lys Ala His Trp Leu Ser Ile Glu Gly Cys
130 135 140
CAG CCA GCT ATC CCC GAG AAC CCG CCC CCA GCT CCC AAA GAG CAA CAG
1442
Gln Pro Ala Ile Pro Glu Asn Pro Pro Pro Ala Pro Lys Glu Gln Gln
145 150 155
AAG GCT GAA GCC ACA GAA CCC CTG AAG TCA GCC AAG CCA GGC CAG GAG
1490
Lys Ala Glu Ala Thr Glu Pro Leu Lys Ser Ala Lys Pro Gly Gln Glu
160 165 170
GAA GAC GGA CCC CTG AAG GGC AAA GGT CAA GGG GCC ACC ACA GCC GAC
1538
Glu Asp Gly Pro Leu Lys Gly Lys Gly Gln Gly Ala Thr Thr Ala Asp
175 180 185
GGC AAA GGG AAA GAG AAG AAG GCG CCG CCC TTG CTG GAG GGG GCC CCC
1586
Gly Lys Gly Lys Glu Lys Lys Ala Pro Pro Leu Leu Glu Gly Ala Pro
190 195 200
205 TTG CGA CTG AAG CCC CGG AGC ATC CAC GAG TTG TCT GTG GAG CAG CAG
1634
Leu Arg Leu Lys Pro Arg Ser Ile His Glu Leu Ser Val Glu Gln Gln
210 215 220
CTC TAC TAC AAG GAG ATC ACC GAG GCC TGC GTG GGC TCC TGC GAG GCC
1682
Leu Tyr Tyr Lys Glu Ile Thr Glu Ala Cys Val Gly Ser Cys Glu Ala
225 230 235
AAG AGG GCG GAA GCC CTG CAA AGC ATT GCC ACG GAC CCT GGA CTG TAT
1730
Lys Arg Ala Glu Ala Leu Gln Ser Ile Ala Thr Asp Pro Gly Leu Tyr
240 245 250
CAG ATG CTG CCA CGG TTC AGT ACC TTT ATC TCG GAG GGG GTC CGT GTG
1778
Gln Met Leu Pro Arg Phe Ser Thr Phe Ile Ser Glu Gly Val Arg Val
255 260 265
AAC GTG GTT CAG AAC AAC CTG GCC CTA CTC ATC TAC CTG ATG CGT ATG
1826
Asn Val Val Gln Asn Asn Leu Ala Leu Leu Ile Tyr Leu Met Arg Met
270 275 280
285
GTG AAA GCG CTG ATG GAC AAC CCC ACG CTC TAT CTA GAA AAA TAC GTC
1874
Val Lys Ala Leu Met Asp Asn Pro Thr Leu Tyr Leu Glu Lys Tyr Val
290 295 300
CAT GAG CTG ATT CCA GCT GTG ATG ACC TGC ATC GTG AGC AGA CAG TTG
1922
His Glu Leu Ile Pro Ala Val Met Thr Cys Ile Val Ser Arg Gln Leu 305 310 315
TGC CTG CGA CCA GAT GTG GAC AAT CAC TGG GCA CTC CGA GAC TTT GCT
1970
Cys Leu Arg Pro Asp Val Asp Asn His Trp Ala Leu Arg Asp Phe Ala
320 325 330
GCC CGC CTG GTG GCC CAG ATC TGC AAG CAT TTT AGC ACA ACC ACT AAC
2018
Ala Arg Leu Val Ala Gln Ile Cys Lys His Phe Ser Thr Thr Thr Asn
335 340 345
AAC ATC CAG TCC CGG ATC ACC AAG ACC TTC ACC AAG AGC TGG GTG GAC
2066
Asn Ile Gln Ser Arg Ile Thr Lys Thr Phe Thr Lys Ser Trp Val Asp
350 355 360
365
GAG AAG ACG CCC TGG ACG ACT CGT TAT GGC TCC ATC GCA GGC TTG GCT
2114
Glu Lys Thr Pro Trp Thr Thr Arg Tyr Gly Ser Ile Ala Gly Leu Ala
370 375 380
GAG CTG GGA CAC GAT GTT ATC AAG ACT CTG ATT CTG CCC CGG CTG CAG
2162
Glu Leu Gly His Asp Val Ile Lys Thr Leu Ile Leu Pro Arg Leu Gln
385 390 395
ACC TTC ACC AAG AGC TGG GTG GAC GAG AAG ACG CCC TGG ACG ACT CGT
2210
Thr Phe Thr Lys Ser Trp Val Asp Glu Lys Thr Pro Trp Thr Thr Arg
400 405 410
TAT GGC TCC AGG ATT GGA GCA GAC CAT GTG CAG AGC CTC CTG CTG AAA
2258 Tyr Gly Ser Arg Ile Gly Ala Asp His Val Gln Ser Leu Leu Leu Lys
415 420 425
CAC TGT GCT CCT GTT CTG GCA AAG CTG CGC CCA CCG CCT GAC AAT CAG
2306
His Cys Ala Pro Val Leu Ala Lys Leu Arg Pro Pro Pro Asp Asn Gln
430 435 440
445
GAC GCC TAT CGG GCA GAA TTC GGG TCC CTT GGG CCC CTC CTC TGC TCC
2354
Asp Ala Tyr Arg Ala Glu Phe Gly Ser Leu Gly Pro Leu Leu Cys Ser
450 455 460
CAG GTG GTC AAG GCT CGG GCC CAG GCT GCT CTG CAG GCT CAG CAG GTC
2402
Gln Val Val Lys Ala Arg Ala Gln Ala Ala Leu Gln Ala Gln Gln Val
465 470 475
AAC AGG ACC ACT CTG ACC ATC ACG CAG CCC CGG CCC ACG CTG ACC CTC
2450
Asn Arg Thr Thr Leu Thr Ile Thr Gln Pro Arg Pro Thr Leu Thr Leu
480 485 490
TCG CAG GCC CCA CAG CCT GGC CCT CGC ACC CCT GGC TTG CTG AAG GTT
2498
Ser Gln Ala Pro Gln Pro Gly Pro Arg Thr Pro Gly Leu Leu Lys Val
495 500 505
CCT GGC TCC ATC GCA CTT CCT GTC CAG ACA CTG GTG TCT GCA CGA GCG
2546
Pro Gly Ser Ile Ala Leu Pro Val Gln Thr Leu Val Ser Ala Arg Ala
510 515 520
525 GCT GCC CCA CCA CAG CCT TCC CCT CCT CCC ACC AAG TTT ATT GTA ATG
2594
Ala Ala Pro Pro Gln Pro Ser Pro Pro Pro Thr Lys Phe Ile Val Met
530 535 540
TCA TCG TCC TCC AGC GCC CCA TCC ACC CAG CAG GTC CTG TCC CTC AGC
2642
Ser Ser Ser Ser Ser Ala Pro Ser Thr Gln Gln Val Leu Ser Leu Ser
545 550 555
ACC TCG GCC CCC GGC TCA GGT TCC ACC ACC ACT TCG CCC GTC ACC ACC
2690
Thr Ser Ala Pro Gly Ser Gly Ser Thr Thr Thr Ser Pro Val Thr Thr
560 565 570
ACC GTC CCC AGC GTG CAG CCC ATC GTC AAG TTG GTC TCC ACC GCC ACC
2738
Thr Val Pro Ser Val Gln Pro Ile Val Lys Leu Val Ser Thr Ala Thr
575 580 585
ACC GCA CCC CCC AGC ACT GCT CCC TCT GGT CCT GGG AGT GTC CAG AAG
2786
Thr Ala Pro Pro Ser Thr Ala Pro Ser Gly Pro Gly Ser Val Gln Lys
590 595 600
605
TAC ATC GTG GTC TCA CTT CCC CCA ACA GGG GAG GGC AAA GGA GGC CCC
2834
Tyr Ile Val Val Ser Leu Pro Pro Thr Gly Glu Gly Lys Gly Gly Pro
610 615 620
ACC TCC CAT CCT TCT CCA GTT CCT CCC CCG GCA TCG TCC CCG TCC CCA
2882
Thr Ser His Pro Ser Pro Val Pro Pro Pro Ala Ser Ser Pro Ser Pro 625 630 635
CTC AGC GGC AGT CGG GTT TGT GGG GGG AAG CAG GAG GCT GGG GAC AGT
2930
Leu Ser Gly Ser Arg Val Cys Gly Gly Lys Gln Glu Ala Gly Asp Ser
640 645 650
CCC CCT CCA GCT CCA GGG ACT CCA AAA GCC AAT GGC TCC CAG CCC AAC
2978
Pro Pro Pro Ala Pro Gly Thr Pro Lys Ala Asn Gly Ser Gln Pro Asn
655 660 665
TGC GGC TCC CCT CAG CCT GCT CCG TGATGCTCCA CCTGCCAGCC CCCGGATTCC
3032
Cys Gly Ser Pro Gln Pro Ala Pro
670 675
CACACATGCA GACATGTACA CACGTGCACG TACACACATG CATGCTCGCT AAGCGGAAGG
3092
AAGTTGTAGA TTGCTTCCTT CATGTCACTT TCTTTTTAGA TATTGTACAG CCAGTTTCTC
3152
AGAATAAAAG TTTGGTTTGT AAAAAAAAAA
3182
(2) INFORMATION FOR SEQ ID NO:13:
(i) SEQUENCE CHARACTERISTICS:
(A) LENGTH: 677 amino acids
(B) TYPE: amino acid
(D) TOPOLOGY: linear
(ii) MOLECULE TYPE: protein
(xi) SEQUENCE DESCRIPTION: SEQ ID NO:13:
Met Ala Glu Glu Lys Lys Leu Lys Leu Ser Asn Thr Val Leu Pro Ser 1 5 10
15
Glu Ser Met Lys Val Val Ala Glu Ser Met Gly Ile Ala Gln Ile Gln
20 25 30
Glu Glu Thr Cys Gln Leu Leu Thr Asp Glu Val Ser Tyr Arg Ile Lys
35 40 45
Glu Ile Ala Gln Asp Ala Leu Lys Phe Met His Met Gly Lys Arg Gln
50 55 60
Lys Leu Thr Thr Ser Asp Ile Asp Tyr Ala Leu Lys Leu Lys Asn Val
65 70 75
80
Glu Pro Leu Tyr Gly Phe His Ala Gln Asp Phe Ile Pro Phe Arg Phe
85 90
95
Ala Ser Gly Gly Gly Arg Glu Leu Tyr Phe Tyr Glu Glu Lys Glu Val
100 105 110
Asp Leu Ser Asp Ile Ile Asn Thr Pro Leu Pro Arg Val Pro Leu Asp
115 120 125
Val Cys Leu Lys Ala His Trp Leu Ser Ile Glu Gly Cys Gln Pro Ala
130 135 140 Ile Pro Glu Asn Pro Pro Pro Ala Pro Lys Glu Gln Gln Lys Ala Glu
145 150 155
160
Ala Thr Glu Pro Leu Lys Ser Ala Lys Pro Gly Gln Glu Glu Asp Gly
165 170 175 Pro Leu Lys Gly Lys Gly Gln Gly Ala Thr Thr Ala Asp Gly Lys Gly
180 185 190
Lys Glu Lys Lys Ala Pro Pro Leu Leu Glu Gly Ala Pro Leu Arg Leu
195 200 205
Lys Pro Arg Ser Ile His Glu Leu Ser Val Glu Gln Gln Leu Tyr Tyr
210 215 220
Lys Glu Ile Thr Glu Ala Cys Val Gly Ser Cys Glu Ala Lys Arg Ala
225 230 235
240
Glu Ala Leu Gln Ser Ile Ala Thr Asp Pro Gly Leu Tyr Gln Met Leu
245 250 255
Pro Arg Phe Ser Thr Phe Ile Ser Glu Gly Val Arg Val Asn Val Val
260 265 270 Gln Asn Asn Leu Ala Leu Leu Ile Tyr Leu Met Arg Met Val Lys Ala
275 280 285
Leu Met Asp Asn Pro Thr Leu Tyr Leu Glu Lys Tyr Val His Glu Leu
290 295 300 Ile Pro Ala Val Met Thr Cys Ile Val Ser Arg Gln Leu Cys Leu Arg
305 310 315
320
Pro Asp Val Asp Asn His Trp Ala Leu Arg Asp Phe Ala Ala Arg Leu
325 330 335
Val Ala Gln Ile Cys Lys His Phe Ser Thr Thr Thr Asn Asn Ile Gln
340 345 350 Ser Arg Ile Thr Lys Thr Phe Thr Lys Ser Trp Val Asp Glu Lys Thr
355 360 365
Pro Trp Thr Thr Arg Tyr Gly Ser Ile Ala Gly Leu Ala Glu Leu Gly
370 375 380
His Asp Val Ile Lys Thr Leu Ile Leu Pro Arg Leu Gln Thr Phe Thr
385 390 395
400
Lys Ser Trp Val Asp Glu Lys Thr Pro Trp Thr Thr Arg Tyr Gly Ser
405 410 415
Arg Ile Gly Ala Asp His Val Gln Ser Leu Leu Leu Lys His Cys Ala
420 425 430
Pro Val Leu Ala Lys Leu Arg Pro Pro Pro Asp Asn Gln Asp Ala Tyr
435 440 445
Arg Ala Glu Phe Gly Ser Leu Gly Pro Leu Leu Cys Ser Gln Val Val
450 455 460
Lys Ala Arg Ala Gln Ala Ala Leu Gln Ala Gln Gln Val Asn Arg Thr
465 470 475
480
Thr Leu Thr Ile Thr Gln Pro Arg Pro Thr Leu Thr Leu Ser Gln Ala
485 490 495
Pro Gln Pro Gly Pro Arg Thr Pro Gly Leu Leu Lys Val Pro Gly Ser
500 505 510 Ile Ala Leu Pro Val Gln Thr Leu Val Ser Ala Arg Ala Ala Ala Pro
515 520 525 Pro Gln Pro Ser Pro Pro Pro Thr Lys Phe Ile Val Met Ser Ser Ser
530 535 540
Ser Ser Ala Pro Ser Thr Gln Gln Val Leu Ser Leu Ser Thr Ser Ala
545 550 555
560
Pro Gly Ser Gly Ser Thr Thr Thr Ser Pro Val Thr Thr Thr Val Pro
565 570 575
Ser Val Gln Pro Ile Val Lys Leu Val Ser Thr Ala Thr Thr Ala Pro
580 585 590
Pro Ser Thr Ala Pro Ser Gly Pro Gly Ser Val Gln Lys Tyr Ile Val
595 600 605
Val Ser Leu Pro Pro Thr Gly Glu Gly Lys Gly Gly Pro Thr Ser His
610 615 620
Pro Ser Pro Val Pro Pro Pro Ala Ser Ser Pro Ser Pro Leu Ser Gly
625 630 635
640
Ser Arg Val Cys Gly Gly Lys Gln Glu Ala Gly Asp Ser Pro Pro Pro
645 650 655
Ala Pro Gly Thr Pro Lys Ala Asn Gly Ser Gln Pro Asn Cys Gly Ser
660 665 670
Pro Gln Pro Ala Pro
675 dTAFII250 amino acid sequence
MGPGCDLLLRTAATITAAAIMSDTDSDEDSAGGGPFSLAGFLFGNINGAGQLEGESV LDDECKK HLAGLGALGLGSLITELTANEE LTGTDGALVNDEGWVRSTEDAVDYSDIN EVAEDESRRYQQTMGSL QPLCΗSDYDEDDYDADCEDIDCKLMPPPPPPPGPMKKDKD
QDSITGEKVDFSSSSDSESEMGPQEATQAESEDGKLTLPLAGIMQHDATKLLPSVTEL
FPEFRPGKVL RFLRL FGPGLNV PSVWRSARRKRKKKH RELIQEEQIQEVECSVESEVS
QKSLWNYDYAPPPPPEQCLSDDEITMMAPVESKFSQSTGDIDKVTDTKPRVAEWRY
GPARLWYDMLGWEDGSGFDYGFKL RKTEHEPVIKSRMIEEFRKLEENNGTDLLADE
NFLMVTTQ LHWEDDIIWDGEDVKHKGTKPQRASLAGWLPSSMTRNAMAYNVQQGF
AATLDDDKPWYSIFPIDNEDLVYGRWEDNIIWDAQAMPRLL EPPVLTLDPNDENLI
LEIPDEK EEATSNSPSKESKKESSLKKSRILLGKTGVIKEEPQQNMSQPEVKDPWNLSN
DEYYYPKQQGLRGTFGGNIIQHSIPAVELRQPFFPTHMGPIKLRQFHRPPLKKYSFGA
LSQPGPHSVQPLLKHIKKA KMREQERQASGGGEMFFMRTPQDLTGKDGDLILAEYS
EENGPLMMQVGMATKIKNΥKRKPGKDPGAPDCKYGETVYCMSPFL GSLHPGQLL
QAFENNLFRAPIYLHKMPETDFLIIRTRQGYYIRELVDIFVVGQQCPLFEVPGPNSKR
ANTHIRDFLQVFIYRLFWKSKDRPRRME DIKKAFPSHSESSIRKRLKLCADFKRTG
MDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPE
EENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKI
PNKPTQQKDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRKF GVPEEEIKKLSRWEV
IDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQMCVLS STEVL
STDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRMLLAAGSAAS
GNNHRDDDTASVTSLNSSATGRCLKIYRTFRDEEGKEYVRCΕTWKPAVIDAYVRIR
TTKDEEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKEKLKGPPEKKPKKMKER
PDLKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHNDNEE
LIKVEGTKIVLGKQLFFISADEVRRKSLVLKFPKQQLPPKKKRRRVGTTVHCDYLNRPHK
SIHRRRTDPMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQT
LRENVRKRLYPSREEFREHL ELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKL
ARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKV
IVNPMDLETRKNSKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNVCY
QTLTEYDEHLTQLEKDICTAKEAALEEAELESLDPMTPGPYTPQPPDLYDTNTSLSMS
RDASXTQDESNMSVLDIPSATPEKQVTQEGEDGDGDLADEEEGTVQQPQASVLYEDL
LMSESEGEDDEEDAGSDEEGDNPFSAIQLSESGSDSDVGSGGIRPKQPRMLQENTRMDME
NEESMMSYEGDD GEASHGLED SMSYGSYEEPDPKSNTQDTSF SSIGGYEVSEEEEEDEEE
EEQRSGPSVLSQVHLSEDEEDSEDFHSIAGDSDLDSDE Sequence Range: 1 to 2214
5 10 15 20 25 30 35 40 45
* * * *
AGA GGT GGT GCA GGC GGC GCC CCC GGC GGC GCA GAC CCT GGC GCC AGC
Arg Gly Gly Ala Gly Gly Ala Pro Gly Gly Ala Asp Pro Gly Ala Ser> ____a_____ a_______ a_______ TRANSLATION OF HTAF130 DNA [A]_ a____ a_____ a_____ a_____ >
50 55 60 65 70 75 80 85 90 95
* * * * *
GGC CCG GCC AGC ACG GCG GCC AGC ATG GTC ATC GGG CCA ACT ATG CAA
Gly Pro Ala Ser Thr Ala Ala Ser Met Val Ile Gly Pro Thr Met Gln> ____a_____ a_______ a__TRANSLATION OF HTAF130 DNA [A]_a____ a_____ a_____ a_____ >
100 105 110 115 120 125 130 135 140
* * * * *
GGG CGC TGC CCA GCC CGG CCG CCG TCC CGC CGC CCG CCC CCG GGA CCC
Gly Arg Cys Pro Ala Arg Pro Pro Ser Arg Arg Pro Pro Pro Gly Pro> ____a_____ a_______ a__ TRANSLATION OF HTAF130 DNA [A]_a____ a_____ a_____ a_____ >
145 150 155 160 165 170 175 180 185 190
* * * * *
CCA CCG GGC TGC CCA AAA GGC GCG GCC GGC GCA GTG ACC CAG AGC CTG
Pro Pro Gly Cys Pro Lys Gly Ala Ala Gly Ala Val Thr Gln Ser Leu> ____a_____ a_______ a__ TRANSLATION OF HTAF130 DNA [A]_a____ a_____ a_____ a_____ >
195 200 205 210 215 220 225 230 235 240
* * * * *
TCC CGG ACG CCC ACG GCC ACC ACC AGC GGG ATT CGG GCC ACC CTG ACG
Ser Arg Thr Pro Thr Ala Thr Thr Ser Gly Ile Arg Ala Thr Leu Thr> ____a_____ a_______ a__ TRANSLATION OF HTAF130 DNA [A] _a____ a_____ a_____ a_____>
245 250 255 260 265 270 275 280 285
* * * *
CCC ACC GTG CTG GCC CCC CGC TTG CCG CAG CCG CCT CAG AAC CCG ACC
Pro Thr Val Leu Ala Pro Arg Leu Pro Gln Pro Pro Gln Asn Pro Thr> ____a_____ a_______ a__TRANSLATION OF HTAF130 DNA [A]_a____ a_____ a_____ a_____ >
290 295 300 305 310 315 320 325 330 335
* * * * *
AAC ATC CAG AAC TTC CAG CTG CCC CCA GGA ATG GTC CTC GTC CGA AGT
Asn Ile Gln Asn Phe Gln Leu Pro Pro Gly Met Val Leu Val Arg Ser> ____a_____ a_______ a__ TRANSLATION OF HTAF130 DNA [A]_a____ a_____ a_____ a_____ >
340 345 350 355 360 365 370 375 380
* * * * *
GAG AAT GGG CAG TTG TTA ATG ATT CCT CAG CAG GCC TTG GCC CAG ATG
Glu Asn Gly Gln Leu Leu Met Ile Pro Gln Gln Ala Leu Ala Gln Met> ____a_____ a_______ a__ TRANSLATION OF HTAF130 DNA [A]_a____ a_____ a_____ a_____ >
385 390 395 400 405 410 415 420 425 430
* * * * *
CAG GCG CAG GCC CAT GCC CAG CCT CAG ACC ACC ATG GCG CCT CGC CCT
Gln Ala Gln Ala His Ala Gln Pro Gln Thr Thr Met Ala Pro Arg Pro> ____a_____ a_______ a__TRANSLATION OF HTAF130 DNA [A]_a____ a_____ a_____ a_____ >
435 440 445 450 455 460 465 470 475 480
* * * * *
GCC ACC CCC ACA AGT GCC CCT CCC GTC CAG ATC TCC ACC GTA CAG GCA
Ala Thr Pro Thr Ser Ala Pro Pro Val Gln Ile Ser Thr Val Gln Ala> ____a_____ a_______ a__TRANSLATION OF HTAF130 DNA [A]_a____ a_____ a_____ a_____ > 485 490 495 500 505 510 515 520 525
* * * *
CCT GGA ACA CCT ATC ATT GCA CGG CAG GTG ACC CCA ACT ACC ATA ATT
Pro Gly Thr Pro Ile Ile Ala Arg Gln Val Thr Pro Thr Thr Ile Ile>
____a_____ a_______ a___TRANSLATION OF HTAF130 DNA [A]_a____ a_____ a_____ a_____ >
530 535 540 545 550 555 560 565 570 575
* * * * *
AAG CAA GTG TCT CAG GCC CAG ACA ACG GTG CAG CCC AGT GCA ACC CTG
Lys Gln Val Ser Gln Ala Gln Thr Thr Val Gln Pro Ser Ala Thr Leu>
a a a TRANSLATION OF HTAF130 DNA [A]_a____ a_____ a_____ a_____ >
580 585 590 595 600 605 610 615 620
* * * * *
CAG CGC TCG CCC GGC GTC CAG CCT CAG CTC GTT CTG GGT GGC GCT GCC
Gln Arg Ser Pro Gly Val Gln Pro Gln Leu Val Leu Gly Gly Ala Ala>
____a_____ a_______ a___TRANSLATION OF HTAF130 DNA [A] _a____ a_____ a_____ a_____>
625 630 635 640 645 650 655 660 665 670
* * * * *
CAG ACG GCT TCA CTT GGG ACG GCG ACG GCT GTT CAG ACG GGG ACT CCT
Gln Thr Ala Ser Leu Gly Thr Ala Thr Ala Val Gln Thr Gly Thr Pro>
____a_____ a_______ a___TRANSLATION OF HTAF130 DNA [A]_a____ a_____ a_____ a_____ >
675 680 685 690 695 700 705 710 715 720
* * * * *
CAG CGC ACG GTA CCA GGG GCG ACC ACC ACT TCC TCA GCT GCC ACG GAA
Gln Arg Thr Val Pro Gly Ala Thr Thr Thr Ser Ser Ala Ala Thr Glu>
____a_____ a_______ a___TRANSLATION OF HTAF130 DNA [A] _a____ a_____ a_____ a_____>
725 730 735 740 745 750 755 760 765
* * * *
ACT ATG GAA AAC GTG AAG AAA TGT AAA AAT TTC CTA TCT ACG TTA ATA
Thr Met Glu Asn Val Lys Lys Cys Lys Asn Phe Leu Ser Thr Leu Ile>
____a_____ a_______ a___TRANSLATION OF HTAF130 DNA [A]_a____ a_____ a_____ a_____ >
770 775 780 785 790 795 800 805 810 815
* * * * *
AAA CTG GCT TCA TCT GGC AAG CAG TCT ACA GAG ACA GCA GCT AAT GTG
Lys Leu Ala Ser Ser Gly Lys Gln Ser Thr Glu Thr Ala Ala Asn Val>
____a_____ a_______ a___TRANSLATION OF HTAF130 DNA [A] _a____ a_____ a_____ a_____>
820 825 830 835 840 845 850 855 860
* * * * *
AAA GAG CTC GTG CAG AAT TTA CTG GAT GGA AAA ATA GAA GCA GAA GAT
Lys Glu Leu Val Gln Asn Leu Leu Asp Gly Lys Ile Glu Ala Glu Asp>
____a_____ a_______ a___TRANSLATION OF HTAF130 DNA [A] _a____ a_____ a_____ a_____>
865 870 875 880 885 890 895 900 905 910
* * * * *
TTC ACA AGC AGG TTA TAC CGA GAA CTT AAT TCT TCA CCT CAA CCT TAC
Phe Thr Ser Arg Leu Tyr Arg Glu Leu Asn Ser Ser Pro Gln Pro Tyr>
____a_____ a_______ a___ TRANSLATION OF HTAF130 DNA [A] _a____ a_____ a_____ a____>
915 920 925 930 935 940 945 950 955 960
* * * * *
CTT GTG CCT TTC CTG AAG AGG AGC TTA CCC GCC TTG AGA CAG CTG ACC
Leu Val Pro Phe Leu Lys Arg Ser Leu Pro Ala Leu Arg Gln Leu Thr>
____a_____ a_______ a___ TRANSLATION OF HTAF130 DNA [A]_a____ a_____ a_____ a_____ >
965 970 975 980 985 990 995 1000 1005
* * * * CCC GAC TCC GCG GCC TTC ATC CAG CAG AGC CAG CAG CAG CCG CCA CCG Pro Asp Ser Ala Ala Phe Ile Gln Gln Ser Gln Gln Gln Pro Pro Pro> a a a TRANSLATION OF HTAF130 DNA [A]_a____ a_____ a_____ a_____ >
1010 1015 1020 1025 1030 1035 1040 1045 1050 1055
* * * * *
CCC ACC TCG CAG GCC ACC ACT GCG CTC ACG GCC GTG GTG CTG AGT AGC
Pro Thr Ser Gln Ala Thr Thr Ala Leu Thr Ala Val Val Leu Ser Ser> ____a_____ a_______ a___TRANSLATION OF HTAF130 DNA [A]__a____ a_____ a_____ a_____>
1060 1065 1070 1075 1080 1085 1090 1095 1100
* * * * *
TCG GTC CAG CGC ACG GCC GGG AAG ACG GCG GCC ACC GTG ACC AGT GCC
Ser Val Gln Arg Thr Ala Gly Lys Thr Ala Ala Thr Val Thr Ser Ala> ____a_____ a_______ a__TRANSLATION OF HTAF130 DNA [A]_a____ a_____ a_____ a_____ >
1105 1110 1115 1120 1125 1130 1135 1140 1145 1150
* * * * *
CTC CAG CCC CCT GTG CTC AGC CTC ACG CAG CCC ACG CAG GTC GGC GTC
Leu Gln Pro Pro Val Leu Ser Leu Thr Gln Pro Thr Gln Val Gly Val> ____a_____ a_______ a___TRANSLATION OF HTAF130 DNA [A]_a____ a_____ a_____ a_____ >
1155 1160 1165 1170 1175 1180 1185 1190 1195 1200
* * * * *
GGC AAG CAG GGG CAA CCC ACA CCG CTG GTC ATC CAG CAG CCT CCG AAG
Gly Lys Gln Gly Gln Pro Thr Pro Leu Val Ile Gln Gln Pro Pro Lys> ____a_____ a_______ a__TRANSLATION OF HTAF130 DNA [A]_a____ a_____ a_____ a_____ >
1205 1210 1215 1220 1225 1230 1235 1240 1245
* * * *
CCA GGA GCC CTG ATC CGG CCC CCG CAG GTG ACG TTG ACG CAG ACA CCC
Pro Gly Ala Leu Ile Arg Pro Pro Gln Val Thr Leu Thr Gln Thr Pro> ____a_____ a_______ a__TRANSLATION OF HTAF130 DNA [A] _a____ a_____ a_____ a_____>
1250 1255 1260 1265 1270 1275 1280 1285 1290 1295
* * * * *
ATG GTC GCC CTG CGG CAG CCT CAC AAC CGG ATC ATG CTC ACC ACG CCT
Met Val Ala Leu Arg Gln Pro His Asn Arg Ile Met Leu Thr Thr Pro> ____a_____ a_______ a__TRANSLATION OF HTAF130 DNA [A]_a____ a_____ a_____ a_____ >
1300 1305 1310 1315 1320 1325 1330 1335 1340
* * * * *
CAG CAG ATC CAG CTG AAC CCA CTG CAG CCA GTC CCT GTG GTG AAA CCC
Gln Gln Ile Gln Leu Asn Pro Leu Gln Pro Val Pro Val Val Lys Pro> ____a_____ a_______ a__TRANSLATION OF HTAF130 DNA [A] _a____ a_____ a_____ a_____>
1345 1350 1355 1360 1365 1370 1375 1380 1385 1390
* * * * *
GCC GTG TTA CCT GGA ACC AAA GCC CTT TCT GCT GTC TCG GCA CAA GCA
Ala Val Leu Pro Gly Thr Lys Ala Leu Ser Ala Val Ser Ala Gln Ala> ____a_____ a_______ a__TRANSLATION OF HTAF130 DNA [A]_a a a a >
1395 1400 1405 1410 1415 1420 1425 1430 1435 1440
* * * * *
GCT GCT GCA CAG AAA AAT AAA CTC AAG GAG CCT GGG GGA GGT TCG TTT
Ala Ala Ala Gln Lys Asn Lys Leu Lys Glu Pro Gly Gly Gly Ser Phe> ____a_____ a_______ a__TRANSLATION OF HTAF130 DNA [A]_a____ a_____ a_____ a_____ >
1445 1450 1455 1460 1465 1470 1475 1480 1485
* * * *
CGG GAC GAT GAT GAC ATT AAT GAT GTT GCA TCG ATG GCT GGA GTA AAC
Arg Asp Asp Asp Asp Ile Asn Asp Val Ala Ser Met Ala Gly Val Asn> TRANSLATION OF HTAF130 DNA [A]_a____ a_____ a_____ a_____ >
1490 1495 1500 1505 1510 1515 1520 1525 1530 1535
* * * * *
TTG TCA GAA GAA AGT GCA AGA ATA TTA GCC ACG AAC TCT GAA TTG GTG
Leu Ser Glu Glu Ser Ala Arg Ile Leu Ala Thr Asn Ser Glu Leu Val> ____a_____ a_______ a_TRANSLATION OF HTAF130 DNA [A]_a____ a_____ a_____ a_____ >
1540 1545 1550 1555 1560 1565 1570 1575 1580
* * * * *
GGC ACG CTA ACG CGG TCC TGT AAA GAT GAA ACC TTC CTC CTC CAA GCG
Gly Thr Leu Thr Arg Ser Cys Lys Asp Glu Thr Phe Leu Leu Gln Ala> ____a_____ a_______ a_ TRANSLATION OF HTAF130 DNA [A]_a____ a_____ a_____ a_____ >
1585 1590 1595 1600 1605 1610 1615 1620 1625 1630
* * * * *
CCT TTG CAG AGA AGA ATA TTA GAA ATA GGT AAA AAA CAT GGT ATA ACG
Pro Leu Gln Arg Arg Ile Leu Glu Ile Gly Lys Lys His Gly Ile Thr> ____a_____ a_______ a_ TRANSLATION OF HTAF130 DNA [A]_a____ a_____ a_____ a_____ >
1635 1640 1645 1650 1655 1660 1665 1670 1675 1680
* * * * *
GAA TTA CAT CCA GAT GTA GTA AGT TAT GTA TCA CAT GCC ACG CAA CAA
Glu Leu His Pro Asp Val Val Ser Tyr Val Ser His Ala Thr Gln Gln> ____a_____ a_______ a_ TRANSLATION OF HTAF130 DNA [A]_a____ a_____ a_____ a_____ >
1685 1690 1695 1700 1705 1710 1715 1720 1725
* * * *
AGG CTA CAG AAT CTT GTA GAG AAA ATA TCA GAA ACA GCT CAG CAG AAG
Arg Leu Gln Asn Leu Val Glu Lys Ile Ser Glu Thr Ala Gln Gln Lys> a a a TRANSLATION OF HTAF130 DNA [A]_a____ a_____ a_____ a_____ >
1730 1735 1740 1745 1750 1755 1760 1765 1770 1775
* * * * *
AAC TTT TCT TAC AAG GAT GAC GAC AGA TAT GAG CAG GCG AGT GAC GTC
Asn Phe Ser Tyr Lys Asp Asp Asp Arg Tyr Glu Gln Ala Ser Asp Val> ____a_____ a_______ a_ TRANSLATION OF HTAF130 DNA [A]_a____ a_____ a_____ a_____ >
1780 1785 1790 1795 1800 1805 1810 1815 1820
* * * * *
CGG GCA CAG CTC AAG TTT TTT GAA CAG CTT GAT CAA ATC GAA AAG CAG
Arg Ala Gln Leu Lys Phe Phe Glu Gln Leu Asp Gln Ile Glu Lys Gln> ____a_____ a_______ a_ TRANSLATION OF HTAF130 DNA [A] _a____ a_____ a_____ a____>
1825 1830 1835 1840 1845 1850 1855 1860 1865 1870
* * * * *
AGG AAG GAT GAG CAG GAG CGG GAG ATC CTG ATG AGG GCA GCA AAG TCT
Arg Lys Asp Glu Gln Glu Arg Glu Ile Leu Met Arg Ala Ala Lys Ser> ____a_____ a_______ a_ TRANSLATION OF HTAF130 DNA [A] _a____ a_____ a_____ a_____>
1875 1880 1885 1890 1895 1900 1905 1910 1915 1920
* * * * *
CGG TCA AGA CAA GAA GAT CCA GAA CAG TTA AGG CTG AAA CAG AAG GCA
Arg Ser Arg Gln Glu Asp Pro Glu Gln Leu Arg Leu Lys Gln Lys Ala> ____a_____ a_______ a_ TRANSLATION OF HTAF130 DNA [A]_a____ a_____ a_____ a_____ >
1925 1930 1935 1940 1945 1950 1955 1960 1965
* * * *
AAG GAG ATG CAG CAA CAG GAA CTG GCA CAA ATG AGA CAG CGG GAC GCC
Lys Glu Met Gln Gln Gln Glu Leu Ala Gln Met Arg Gln Arg ASD Ala> ____a_____ a_______ a_ TRANSLATION OF HTAF130 DNA [A]_a____ a_____ a_____ a_____ > 1970 1975 1980 1985 1990 1995 2000 2005 2010 2015
* * * * *
AAC CTC ACA GCA CTA GCA GCG ATC GGG CCC AGG AAA AAG AGG AAA GTG
Asn Leu Thr Ala Leu Ala Ala Ile Gly Pro Arg Lys Lys Arg Lys Val>
____a_____ a_______ a_ TRANSLATION OF HTAF130 DNA [A] _a____ a_____ a_____ a_____ >
2020 2025 2030 2035 2040 2045 2050 2055 2060
* * * * *
GAC TGT CCG GGG CCG GGC TCA GGA GCA GAG GGG TCG GGC CCC GGC TCA
Asp Cys Pro Gly Pro Gly Ser Gly Ala Glu Gly Ser Gly Pro Gly Ser>
____a_____ a_______ a_ TRANSLATION OF HTAF130 DNA [A]_a____ a_____ a_____ a_____ >
2065 2070 2075 2080 2085 2090 2095 2100 2105 2110
* * * * *
GTG GTC CCA GGC AGC TCG GGT GTC GGA ACC CCC AGA CAG TTC ACG CGA
Val Val Pro Gly Ser Ser Gly Val Gly Thr Pro Arg Gln Phe Thr Arg>
____a_____ a_______ a_ TRANSLATION OF HTAF130 DNA [A] _a____ a_____ a_____ a_____>
2115 2120 2125 2130 2135 2140 2145 2150 2155 2160
* * * * *
CAA AGA ATC ACG CGG GTC AAC CTC AGG GAC CTC ATA TTT TGT TTA GAA
Gln Arg Ile Thr Arg Val Asn Leu Arg Asp Leu Ile Phe Cys Leu Glu>
a a a TRANSLATION OF HTAF130 DNA [A]_a____ a_____ a_____ a_____ >
2165 2170 2175 2180 2185 2190 2195 2200 2205
* * * *
AAT GAA CGT GAG ACA AGC CAT TCA CTG CTG CTC TAC AAA GCA TTC CTT
Asn Glu Arg Glu Thr Ser His Ser Leu Leu Leu Tyr Lys Ala Phe Leu>
____a_____ a_______ a_ TRANSLATION OF HTAF130 DNA [A] _a____ a_____ a_____ a_____>
2210
*
AAG TGA
Lys ***>
____a_____>
5 10 15 20 25 30 35 40 45 50 * * * * *
RGGAGGAPGG ADPGASGPAS TAASMVIGPT MQGRCPARPP SRRPPPGPPP
55 60 65 70 75 80 85 90 95 100 * * * * *
GCPKGAAGAV TQSLSRTPTA TTSGIRATLT PTVLAPRLPQ PPQNPTNIQN
105 110 115 120 125 130 135 140 145 150 * * * * *
FQLPPGMVLV RSENGQLLMI PQQALAQMQA QAHAQPQTTM APRPATPTSA
155 160 165 170 175 180 185 190 195 200 * * * * *
PPVQISTVQA PGTPIIARQV TPTTIIKQVS QAQTTVQPSA TLQRSPGVQP
205 210 215 220 225 230 235 240 245 250 * * * * *
QLVLGGAAQT ASLGTATAVQ TGTPQRTVPG ATTTSSAATE TMENVKKCKN
255 260 265 270 275 280 285 290 295 300
FLSTLIKLAS SGKQSTETAA NVKELVQNLL DGKIEAEDFT SRLYRELNSS
305 310 315 320 325 330 335 340 345 350 * * * * *
PQPYLVPFLK RSLPALRQLT PDSAAFIQQS QQQPPPPTSQ ATTALTAWL
355 360 365 370 375 380 385 390 395 400 * * * * *
SSSVQRTAGK TAATVTSALQ PPVLSLTQPT QVGVGKQGQP TPLVIQQPPK
405 410 415 420 425 430 435 440 445 450 * * * * *
PGALIRPPQV TLTQTPMVAL RQPHNRIMLT TPQQIQLNPL QPVPWKPAV
455 460 465 470 475 480 485 490 495 500 * * * * *
LPGTKALSAV SAQAAAAQKN KLKEPGGGSF RDDDDINDVA SMAGVNLSEE
505 510 515 520 525 530 535 540 545 550 * * * * *
SARILATNSE LVGTLTRSCK DETFLLQAPL QRRILEIGKK HGITELHPDV
555 560 565 570 575 580 585 590 595 600 * * * * *
VSYVSHATQQ RLQNLVEKIS ETAQQKNFSY KDDDRYEQAS DVRAQLKFFE
605 610 615 620 625 630 635 640 645 650 * * * * *
QLDQIEKQRK DEQEREILMR AAKSRSRQED PEQLRLKQKA -KEMQQQELAQ
655 660 665 670 675 680 685 690 695 700 * * * * *
MRQRDANLTA LAAIGPRKKR KVDCPGPGSG AEGSGPGSW PGSSGVGTPR
705 710 715 720 725 730 735
* * *
QFTRQRITRV NLRDLIFCLE NERETSHSLL LYKAFLK* Sequence Range: 1 to 2152
5 10 15 20 25 30 35 40 45
* * * *
CTA CTG GCC GTG CTG CAG TTC CTA CGG CAG AGC AAA CTC CGC GAG GCC
Leu Leu Ala Val Leu Gln Phe Leu Arg Gln Ser Lys Leu Arg Glu Ala> ____a_____ a_______ a_TRANSLATION OF HTAF100 DNA [A]_a____ a_____ a_____ a_____ >
50 55 60 65 70 75 80 85 90 95
* * * * *
GAA GAG GCG CTG CGC CGT GAG GCC GGG CTG CTG GAG GAG GCA GTG GCG
Glu Glu Ala Leu Arg Arg Glu Ala Gly Leu Leu Glu Glu Ala Val Ala> ____a_____ a_______ a_TRANSLATION OF HTAF100 DNA [A] _a____ a_____ a_____ a_____>
100 105 110 115 120 125 130 135 140
* * * * *
GGC TCC GGA GCC CCG GGA GAG GTG GAC AGC GCC GGC GCT GAG GTG ACC
Gly Ser Gly Ala Pro Gly Glu Val Asp Ser Ala Gly Ala Glu Val Thr> ____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A]_a____ a_____ a_____ a_____ >
145 150 155 160 165 170 175 180 185 190
* * * * *
AGC GCG CTT CTC AGC CGG GTG ACC GCC TCG GCC CCT GGC CCT GCG GCC
Ser Ala Leu Leu Ser Arg Val Thr Ala Ser Ala Pro Gly Pro Ala Ala> ____a_____ a_________a_TRANSLATION OF HTAF100 DNA [A]_a____ a_____ a_____ a_____ >
195 200 205 210 215 220 225 230 235 240
* * * * *
CCC GAC CCT CCG GGC ACT GGC GCT TCG GGG GCC ACG GTC GTC TCA GGT
Pro Asp Pro Pro Gly Thr Gly Ala Ser Gly Ala Thr Val Val Ser Gly> ____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A] _a____ a_____ a_____ a_____>
245 250 255 260 265 270 275 280 285
* * * *
TCA GCC TCA GGT CCT GCG GCT CCG GGT AAA GTT GGA AGT GTT GCT GTG
Ser Ala Ser Gly Pro Ala Ala Pro Gly Lys Val Gly Ser Val Ala Val> ____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A] _a____ a_____ a_____ a____>
290 295 300 305 310 315 320 325 330 335
* * * * *
GAA GAC CAG CCA GAT GTC AGT GCC GTG TTG TCA GCC TAC AAC CAA CAA
Glu Asp Gln Pro Asp Val Ser Ala Val Leu Ser Ala Tyr Asn Gln Gln> ____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A]_a____ a_____ a_____ a_____ >
340 345 350 355 360 365 370 375 380
* * * * *
GGA GAT CCC ACA ATG TAT GAA GAA TAC TAT AGT GGA CTG AAA CAC TTC
Gly Asp Pro Thr Met Tyr Glu Glu Tyr Tyr Ser Gly Leu Lys His Phe> ____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A] _a____ a_____ a_____ a_____>
385 390 395 400 405 410 415 420 425 430
* * * * *
ATT GAA TGT TCC CTG GAC TGC CAT CGG GCA GAG TTG TCC CAA CTT TTT
Ile Glu Cys Ser Leu Asp Cys His Arg Ala Glu Leu Ser Gln Leu Phe> ____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A]_a____ a_____ a_____ a_____ >
435 440 445 450 455 460 465 470 475 480
* * * * *
TAT CCT CTG TTT GTG CAC ATG TAC TTG GAG CTA GTC TAC AAT CAA CAT
Tyr Pro Leu Phe Val His Met Tyr Leu Glu Leu Val Tyr Asn Gln His> ____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A]__a____ a_____ a_____ a_____> 485 490 495 500 505 510 515 520 525
* * * *
GAG AAT GAA GCA AAG TCA TTC TTT GAG AAG TTC CAT GGA GAT CAG GAA
Glu Asn Glu Ala Lys Ser Phe Phe Glu Lys Phe His Gly Asp Gln Glu>
____a_____ a_______ a_TRANSLATION OF HTAF100 DNA [A]_a____ a_____ a_____ a_____ >
530 535 540 545 550 555 560 565 570 575
* * * * *
TGT TAT TAC CAG GAT GAC CTA CGA GTA TTA TCT AGT CTT ACC AAA AAG
Cys Tyr Tyr Gln Asp Asp Leu Arg Val Leu Ser Ser Leu Thr Lys Lys>
____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A] _a____ a_____ a_____ a_____>
580 585 590 595 600 605 610 615 620
* * * * *
GAA CAC ATG AAA GGG AAT GAG ACC ATG TTG GAT TTT CGA ACA AGT AAA
Glu His Met Lys Gly Asn Glu Thr Met Leu Asp Phe Arg Thr Ser Lys>
____a_____ a_______ a_TRANSLATION OF HTAF100 DNA [A]_a____ a_____ a_____ a_____ >
625 630 635 640 645 650 655 660 665 670
* * * * *
TTT GTT CTG CGT ATT TCC CGT GAC TCG TAC CAA CTC TTG AAG AGG CAT
Phe Val Leu Arg Ile Ser Arg Asp Ser Tyr Gln Leu Leu Lys Arg His>
____a_____ a_______ a_TRANSLATION OF HTAF100 DNA [A]_a____ a_____ a_____ a_____ >
675 680 685 690 695 700 705 710 715 720
* * * * *
CTT CAG GAG AAA CAG AAC AAT CAG ATA TGG AAC ATA GTT CAG GAG CAC
Leu Gln Glu Lys Gln Asn Asn Gln Ile Trp Asn Ile Val Gln Glu His>
____a_____ a_______ a_TRANSLATION OF HTAF100 DNA [A] _a____ a_____ a_____ a_____>
725 730 735 740 745 750 755 760 765
* * * *
CTC TAC ATT GAC ATC TTT GAT GGG ATG CCG CGT AGT AAG CAA CAG ATA
Leu Tyr Ile Asp Ile Phe Asp Gly Met Pro Arg Ser Lys Gln Gln Ile>
____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A] _a____ a_____ a_____ a_____>
770 775 780 785 790 795 800 805 810 815
* * * * *
GAT GCG ATG GTG GGA AGT TTG GCA GGA GAG GCT AAA CGA GAG GCA AAC
Asp Ala Met Val Gly Ser Leu Ala Gly Glu Ala Lys Arg Glu Ala Asn>
____a_____ a_______ a_TRANSLATION OF HTAF100 DNA [A] _a____ a_____ a_____ a_____>
820 825 830 835 840 845 850 855 860
* * * * *
AAA TCA AAG GTA TTT TTT GGT TTA TTA AAA GAA CCA GAA ATT GAG GTA
Lys Ser Lys Val Phe Phe Gly Leu Leu Lys Glu Pro Glu Ile Glu Val>
____a_____ a_______ a_TRANSLATION OF HTAF100 DNA [A] _a____ a_____ a_____ a____>
865 870 875 880 885 890 895 900 905 910
* * * * *
CCT TTG GAT GAC GAG GAT GAA GAG GGA GAA AAT GAA GAA GGA AAA CCT
Pro Leu Asp Asp Glu Asp Glu Glu Gly Glu Asn Glu Glu Gly Lys Pro
____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A] _a____ a_____ a_____ a____>
915 920 925 930 935 940 945 950 955 960
* * * * *
AAA AAG AAG AAG CCT AAA AAA GAT AGT ATT GGA TCC AAA AGC AAA AAA
Lys Lys Lys Lys Pro Lys Lys Asp Ser Ile Gly Ser Lys Ser Lys Lys>
____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A]_a____ a_____ a_____ a_____ >
965 970 975 980 985 990 995 1000 1005 CAA GAT CCC AAT GCT CCA CCT CAG AAC AGA ATC CCT CTT CCT GAG TTG Gln Asp Pro Asn Ala Pro Pro Gln Asn Arg Ile Pro Leu Pro Glu Leu> ____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A] _a____ a_____ a_____ a_____>
1010 1015 1020 1025 1030 1035 1040 1045 1050 1055
* * * * *
AAA GAT TCA GAT AAG TTG GAT AAG ATA ATG AAT ATG AAA GAA ACC ACC
Lys Asp Ser Asp Lys Leu Asp Lys Ile Met Asn Met Lys Glu Thr Thr> ____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A] _a____ a_____ a_____ a_____>
1060 1065 1070 1075 1080 1085 1090 1095 1100
* * * * *
AAA CGA GTA CGC CTT GGG CCG GAC TGC TTA CCC TCC ATT TGT TTC TAT
Lys Arg Val Arg Leu Gly Pro Asp Cys Leu Pro Ser Ile Cys Phe Tyr> ____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A]__a____ a_____ a_____ a_____>
1105 1110 1115 1120 1125 1130 1135 1140 1145 1150
* * * * *
ACA TTT CTC AAT GCT TAC CAG GGT CTC ACT GCA GTG GAT GTC ACT GAT
Thr Phe Leu Asn Ala Tyr Gln Gly Leu Thr Ala Val Asp Val Thr Asp> ____a_____ a________a_TRANSLATION OF HTAF100 DNA [A]_a____ a_____ a_____ a_____ >
1155 1160 1165 1170 1175 1180 1185 1190 1195 1200
* * * * *
GAT TCT AGT CTG ATT GCT GGA GGT TTT GCA GAT TCA ACT GTC AGA GTG
Asp Ser Ser Leu Ile Ala Gly Gly Phe Ala Asp Ser Thr Val Arg Val> ____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A]_a____ a_____ a_____ a_____ >
1205 1210 1215 1220 1225 1230 1235 1240 1245
* * * *
TGG TCG GTA ACA CCC AAA AAG CTT CGT AGT GTC AAA CAA GCA TCA GAT
Trp Ser Val Thr Pro Lys Lys Leu Arg Ser Val Lys Gln Ala Ser Asp> ____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A]_a____ a_____ a_____ a_____ >
1250 1255 1260 1265 1270 1275 1280 1285 1290 1295
* * * * *
CTT AGT CTT ATA GAC AAA GAA TCA GAT GAT GTC TTA GAA AGA ATC ATG
Leu Ser Leu Ile Asp Lys Glu Ser Asp Asp Val Leu Glu Arg Ile Met> ____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A]_a____ a_____ a_____ a_____ >
1300 1305 1310 1315 1320 1325 1330 1335 1340
* * * * *
GAT GAG AAA ACA GCA AGT GAG TTG AAG ATT TTG TAT GGT CAC AGT GGG
Asp Glu Lys Thr Ala Ser Glu Leu Lys Ile Leu Tyr Gly His Ser Gly> ____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A] _a____ a_____ a_____ a_____>
1345 1350 1355 1360 1365 1370 1375 1380 1385 1390
* * * * *
CCT GTC TAC GGA GCC AGC TTC AGT CCG GAT AGG AAC TAT CTG CTT TCC
Pro Val Tyr Gly Ala Ser Phe Ser Pro Asp Arg Asn Tyr Leu Leu Ser> ____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A]_a____ a_____ a_____ a_____ >
1395 1400 1405 1410 1415 1420 1425 1430 1435 1440
* * * * *
TCT TCA GAG GAC GGA ACT GTT AGA TTG TGG AGC CTT CAA ACA TTT ACT
Ser Ser Glu Asp Gly Thr Val Arg Leu Trp Ser Leu Gln Thr Phe Thr> ____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A] _a____ a_____ a_____ a_____>
1445 1450 1455 1460 1465 1470 1475 1480 1485
* * * *
TGT TTG GTG GGA TAT AAA GGA CAC AAC TAT CCA GTA TGG GAC ACA CAA
Cys Leu Val Gly Tyr Lys Gly His Asn Tyr Pro Val Trp Asp Thr Gln> ____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A]_a____ a_____ a_____ a____>
1490 1495 1500 1505 1510 1515 1520 1525 1530 1535
* * * * *
TTT TCN CCA TAT GGA TAT TAT TTT GTG TCA GGG GGC CAT GAC CGA GTA
Phe Ser Pro Tyr Gly Tyr Tyr Phe Val Ser Gly Gly His Asp Arg Val>
____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A] _a____ a_____ a_____ a_____>
1540 1545 1550 1555 1560 1565 1570 1575 1580
* * * * *
GCT CGG CTC TGG GCT ACA GAC CAC TAT CAG CCT TTA AGA ATA TTT GCC
Ala Arg Leu Trp Ala Thr Asp His Tyr Gln Pro Leu Arg Ile Phe Ala>
____a_____ a_______ a_TRANSLATION OF HTAF100 DNA [A]_a____ a_____ a_____ a_____ >
1585 1590 1595 1600 1605 1610 1615 1620 1625 1630
* * * * *
GGC CAT CTT GCT GAT GTG AAT TGT ACC AGA TTC CAT CCA AAT TCT AAT
Gly His Leu Ala Asp Val Asn Cys Thr Arg Phe His Pro Asn Ser Asn>
____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A] _a____ a_____ a_____ a_____>
1635 1640 1645 1650 1655 1660 1665 1670 1675 1680
* * * * *
TAT GTT GCT ACG GGC TCT GCA GAC AGA ACT GTG CGG CTC TGG GAC GTC
Tyr Val Ala Thr Gly Ser Ala Asp Arg Thr Val Arg Leu Trp Asp Val>
____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A] _a____ a_____ a_____ a_____>
1685 1690 1695 1700 1705 1710 1715 1720 1725
* * * *
CTG AAT GGT AAC TGT GTA AGG ATC TTC ACT GGA CAC AAG GGA CCA ATT
Leu Asn Gly Asn Cys Val Arg Ile Phe Thr Gly His Lys Gly Pro Ile>
____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A]_a____ a_____ a_____ a_____ >
1730 1735 1740 1745 1750 1755 1760 1765 1770 1775
* * * * *
CAT TCC TTG ACA TTT TCT CCC AAT GGG AGA TTC CTG GCT ACA GGA GCA
His Ser Leu Thr Phe Ser Pro Asn Gly Arg Phe Leu Ala Thr Gly Ala>
____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A]_a____ a_____ a_____ a_____ >
1780 1785 1790 1795 1800 1805 1810 1815 1820
* * * * *
ACA GAT GGC AGA GTG CTT CTT TGG GAT ATT GGA CAT GGT TTG ATG GTT
Thr Asp Gly Arg Val Leu Leu Trp Asp Ile Gly His Gly Leu Met Val>
____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A] _a____ a_____ a_____ a____>
1825 1830 1835 1840 1845 1850 1855 1860 1865 1870
* * * * *
GGA GAA TTA AAA GGC CAC ACT GAT ACA GTC TGT TCA CTT AGG TTT AGT
Gly Glu Leu Lys Gly His Thr Asp Thr Val Cys Ser Leu Arg Phe Ser>
____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A]_a____ a_____ a_____ a_____ >
1875 1880 1885 1890 1895 1900 1905 1910 1915 1920
* * * * *
AGA GAT GGT GAA ATT TTG GCA TCA GGT TCA ATG GAT AAT ACA GTT CGA
Arg Asp Gly Glu Ile Leu Ala Ser Gly Ser Met Asp Asn Thr Val Arg>
____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A]_a____ a_____ a_____ a_____ >
1925 1930 1935 1940 1945 1950 1955 1960 1965
* * * *
TTA TGG GAT GCT ATC AAA GCC TTT GAA GAT TTA GAG ACC GAT GAC TTT
Leu Trp Asp Ala Ile Lys Ala Phe Glu Asp Leu Glu Thr Asp Asp Phe>
____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A]_a____ a_____ a_____ a_____ > 1970 1975 1980 1985 1990 1995 2000 2005 2010 2015 * * * * *
ACT ACA GCC ACT GGG CAT ATA AAT TTA CCT GAG AAT TCA CAG GAG TTA
Thr Thr Ala Thr Gly His Ile Asn Leu Pro Glu Asn Ser Gln Glu Leu> ____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A]_a____ a_____ a_____ a_____ >
2020 2025 2030 2035 2040 2045 2050 2055 2060
* * * * *
TTG TTG GGA ACA TAT ATG ACC AAA TCA ACA CCA GTT GTA CAC CTT CAT
Leu Leu Gly Thr Tyr Met Thr Lys Ser Thr Pro Val Val His Leu His> ____a_____ a_______ a_TRANSLATION OF HTAF100 DNA [A]_a____ a_____ a_____ a_____ >
2065 2070 2075 2080 2085 2090 2095 2100 2105 2110
* * * * *
TTT ACT CGA AGA AAC CTG GTT CTA GCT GCA GGA GCT TAT AGT CCA CAA
Phe Thr Arg Arg Asn Leu Val Leu Ala Ala Gly Ala Tyr Ser Pro Gln> ____a_____ a_______ a_ TRANSLATION OF HTAF100 DNA [A]_a____ a_____ a_____ a_____ >
2115 2120 2125 2130 2135 2140 2145 2150
* * * *
TAA ACCAT CGGTATTAAA GACCAAAAAA AAAAAAAAAA AA
***>
__________>
5 10 15 20 25 30 35 40 45 50 * * * * *
LLAVLQFLRQ SKLREAEEAL RREAGLLEEA VAGSGAPGEV DSAGAEVTSA
55 60 65 70 75 80 85 90 95 100 * * * * *
LLSRVTASAP GPAAPDPPGT GASGATWSG SASGPAAPGK VGSVAVEDQP
105 110 115 120 125 130 135 140 145 150
* * * * *
DVSAVLSAYN QQGDPTMYEE YYSGLKHFIE CSLDCHRAEL SQLFYPLFVH
155 160 165 170 175 180 185 190 195 200
* * * * *
MYLELVYNQH ENEAKSFFEK FHGDQECYYQ DDLRVLSSLT KKEHMKGNET
205 210 215 220 225 230 235 240 245 250
* * * * *
MLDFRTSKFV LRISRDSYQL LKRHLQEKQN NQIWNIVQEH LYIDIFDGMP
255 260 265 270 275 280 285 290 295 300
* * * * *
RSKQQIDAMV GSLAGEAKRE ANKSKVFFGL LKEPEIEVPL DDEDEEGENE
305 310 315 320 325 330 335 340 345 350
* * * * *
EGKPKKKKPK KDSIGSKSKK QDPNAPPQNR IPLPELKDSD KLDKIMNMKE
355 360 365 370 375 380 385 390 395 400
* * * * *
TTKRVRLGPD CLPSICFYTF LNAYQGLTAV DVTDDSSLIA GGFADSTVRV
405 410 415 420 425 430 435 440 445 450
* * * * *
WSVTPKKLRS VKQASDLSLI DKESDDVLER IMDEKTASEL KILYGHSGPV
455 460 465 470 475 480 485 490 495 500
* * * * *
YGASFSPDRN YLLΞSSEDGT VRLWSLQTFT CLVGYKGHNY PVWDTQFSPY
505 510 515 520 525 530 535 540 545 550
* * * * *
GYYFVSGGHD RVARLWATDH YQPLRIFAGH LADVNCTRFH PNSNYVATGS
555 560 565 570 575 580 585 590 595 600
* * * * *
ADRTVRLWDV LNGNCVRIFT GHKGPIHSLT FSPNGRFLAT GATDGRVLLW
605 610 615 620 625 630 635 640 645 650
* * * * *
DIGHGLMVGE LKGHTDTVCS LRFSRDGEIL ASGSMDNTVR LWDAIKAFED
655 660 665 670 675 680 685 690 695 700
* * * * *
LETDDFTTAT GHINLPENSQ ELLLGTYMTK STPWHLHFT RRNLVLAAGA
705
YSPQ* Sequence Range : 1 to 3820
Figure imgf000151_0001
10 20 30 40 50
* * * * *
AAT TCC TTT TTT ATA ACA AAC GCA AAT TAG TTA ATT AAA TTC TGG CGC AGA ACC GGC TTA AGG AAA AAA TAT TGT TTG CGT TTA ATC AAT TAA TTT AAG ACC GCG TCT TGG CCG
70 80 90 100 110
* * * * *
TGA GCG ATG GAA ACG CAA CCT GAG GTG CCC GAG GTG CCG CTG CGA CCG TTT AAA TTG ACT CGC TAC CTT TGC GTT GGA CTC CAC GGG CTC CAC GGC GAC GCT GGC AAA TTT A M E T Q P E V P E V P L R P F K L
130 140 150 160 170
* * * * *
CAT CAG GTT GTG AGC CTC ACG GGC ATC AGT TTC GAG CGG AGG AGC ATA ATC GGC GTG
GTA GTC CAA CAC TCG GAG TGC CCG TAG TCA AAG CTC GCC TCC TCG TAT TAG CCG C
H Q V V S L T G I S F E R R S I I G V
190 200 210 220 230
GAG CTG ACC ATT GTG CCG AAC AGC GAG AAT CTG CGC CTG ATA CGC CTG AAT GCC AAG
CTC GAC TGG TAA CAC GGC TTG TCG CTC TTA GAC GCG GAC TAT GCG GAC TTA CGG T
E L T I V P N S E N L R L I R L N A K
250 260 270 280 290
* * * * *
CTG AGA ATC TAC AGC GTC GTT TTG AAC GAT GTC TGC CAG GCG GAT TTC ACG TAC TTC
GAC TCT TAG ATG TCG CAG CAA AAC TTG CTA CAG ACG GTC CGC CTA AAG TGC ATG A
L R I Y S V V L N D V C Q A D F T Y F
310 320 330 340 350
* * * * *
CCC TTC CAG AAC ATC TGC TAC AAG GAG CCC AAG AGC CGC GCT CTG GAG GTC TAC TCC
GGG AAG GTC TTG TAG ACG ATG TTC CTC GGG TTC TCG GCG CGA GAC CTC CAG ATG A
P F Q N I C Y K E P K S R A L E V Y S
370 380 390 400 410
* * * * *
CAT CAT CTG ACC GCC GCC CAG TAC ACC GAT CCC GAT GTG AAC AAC GGC GAA CTG CTC GTA GTA GAC TGG CGG CGG GTC ATG TGG CTA GGG CTA CAC TTG TTG CCG CTT GAC GAG
H H L T A A Q Y T D P D V N N G E L L
430 440 450 460 470
* * * * *
CAG GTT CCG CCC GAG GGC TAC TCT ATG ATC CAG GAG GGT CAG GGT CTG CGC ATC CGC
GTC CAA GGC GGG CTC CCG ATG AGA TAC TAG GTC CTC CCA GTC CCA GAC GCG TAG GCG
Q V P P E G Y S M I Q E G Q G L R I R
490 500 510 520 530
* * * * *
GAG TTC TCG TTG GAG AAT CCC AAA TGC GGC GTA CAT TTT GTC ATA CCA CCC GCT TCA
CTC AAG AGC AAC CTC TTA GGG TTT ACG CCG CAT GTA AAA CAG TAT GGT GGG CGA AGT
E F S L E N P K C G V H F V I P P A S
550 560 570 580 590
* * * * *
GAC GAG GAG ACA CAG ATG AAC AGC TCG CAT ATG TTC ACC AAT TGC TAT GAA AAC TCG
CTG CTC CTC TGT GTC TAC TTG TCG AGC GTA TAC AAG TGG TTA ACG ATA CTT TTG AGC
D E E T Q M N S S H M F T N C Y E N S
610 620 630 640 650 * * * * *
AGA TTG TGG TTT CCC TGC GTG GAC AGT TTC GCC GAT CCC TGC ACC TGG CGG CTG GAG
TCT AAC ACC AAA GGG ACG CAC CTG TCA AAG CGG CTA GGG ACG TGG ACC GCC GAC CTC
R L W F P C V D S F A D P C T W R L E
670 680 690 700 710
* * * * *
ACT GTC GAC AAA AAT ATG ACC GCC GTT TCG TGT GGA GAA CTT CTA GAA GTC ATT ATG
TGA CAG CTG TTT TTA TAC TGG CGG CAA AGC ACA CCT CTT GAA GAT CTT CAG TAA TAC
T V D K N M T A V S C G E L L E V I M
730 740 750 760 770
* * * * *
CCA GAT CTG CGA AAG AAA ACC TTC CAC TAT TCG GTT AGC ACA CCA GTA TGT GCA CCA
GGT CTA GAC GCT TTC TTT TGG AAG GTG ATA AGC CAA TCG TGT GGT CAT ACA CGT GGT
P D L R K K T F H Y S V S T P V C A P
790 800 810 820 830
* * * * *
ATT GCG CTG GCT GTG GGT CAG TTT GAG ATC TAC GTG GAT CCG CAC ATG CAT GAA GT TAA CGC GAC CGA CAC CCA GTC AAA CTC TAG ATG CAC CTA GGC GTG TAC GTA CTT CA
I A L A V G Q F E I Y V D P K M H E V
850 860 870 880 890
* * * * *
CAC TTT TGT CTG CCC GGA TTG TTG CCG CTG TTA AAA AAT ACG GTT CGC TAT TTG CAC
GTG AAA ACA GAC GGG CCT AAC AAC GGC GAC AAT TTT TTA TGC CAA GCG ATA AAC GTG
H F C L P G L L P L L K N T V R Y L H
910 920 930 940 950
* * * * *
GCA TTT GAA TTT TAC GAG GAG ACC TTA TCT ACG CGC TAC CCA TTC AGT TGC TAC AAA
CGT AAA CTT AAA ATG CTC CTC TGG AAT AGA TGC GCG ATG GGT AAG TCA ACG ATG TTT
A F E F Y E E T L S T R Y P F S C Y K
970 980 990 1000 1010
* * * * *
GTG TTT GTA GAC GAA TTG GAC ACG GAC ATA AGT GCC TAT GCC ACT ATG AGC ATT GCT
CAC AAA CAT CTG CTT AAC CTG TGC CTG TAT TCA CGG ATA CGG TGA TAC TCG TAA CGA
V F V D E L D T D I S A Y A T M S I A
1030 1040 1050 1060 1070
* * * * *
GTG AAC CTG CTG CAC TCC ATA GCT ATC ATC GAT CAG ACC TAT ATA TCT CGA ACC TTT
CAC TTG GAC GAC GTG AGG TAT CGA TAG TAG CTA GTC TGG ATA TAT AGA GCT TGG AAA
V N L L H S I A I I D Q T Y I S R T F
1090 1100 1110 1120 1130
* * * * *
TCG CGC GCT GTG GCT GAG CAA TTC TTC GGC TGC TTT ATT ACA TCG CAT CAT TGG TCG AGC GCG CGA CAC CGA CTC GTT AAG AAG CCG ACG AAA TAA TGT AGC GTA GTA ACC AGC
S R A V A E Q F F G C F I T S H H W S
1150 1160 1170 1180 1190
* * * * *
ACC TGG CTG GCC AAG GGC ATT GCG GAG TAC CTG TGT GGA TTG TAT TCC AGG AAG TGC
TGG ACC GAC CGG TTC CCG TAA CGC CTC ATG GAC ACA CCT AAC ATA AGG TCC TTC ACG
T W L A K G I A E Y L C G L Y S R K C
1210 1220 1230 1240 1250
* * * * *
GGC AAC AAC GAG TAC CGT GCT TGG GTG CAA TCT GAA CTG GCG CGT GTC GTT CGC TAC CCG TTG TTG CTC ATG GCA CGA ACC CAC GTT AGA CTT GAC CGC GCA CAG CAA GCG ATG G N N E Y R A W V Q S E L A R V V R Y
1270 1280 1290 1300 1310
* * * * *
GAG CAG TAT GGC GGC ATT ATT CTC GAT TGC AGT CAG CCG CCA GCA CCT TTG CCT GTT
CTC GTC ATA CCG CCG TAA TAA GAG CTA ACG TCA GTC GGC GGT CGT GGA AAC GGA CAA
E Q Y G G I I L D C S Q P P A P L P V
1330 1340 1350 1360 1370
* * * * *
GGC ACA AAT CAA TCG GCT GCT TCC AGC AAA CAG CAG GAG ATT GTC CAC TAT TTT CCC
CCG TGT TTA GTT AGC CGA CGA AGG TCG TTT GTC GTC CTC TAA CAG GTG ATA AAA GGG
G T N Q S A A S S K Q Q E I V H Y F P
1390 1400 1410 1420 1430
* * * * *
AAG AGT TTG CAC ACC GTA TCG CCG AAG TAT GTG GAG GCG ATG CGA AGG AAA GCG CAT
TTC TCA AAC GTG TGG CAT AGC GGC TTC ATA CAC CTC CGC TAC GCT TCC TTT CGC GTA
K S L H T V S P K Y V E A M R R K A H
1450 1460 1470 1480 1490
* * * * *
GTA ATC CGA ATG CTG GAG AAC CGC ATC GGG CAG GAG CTG CTG ATT CAG GTG TTC AAT
CAT TAG GCT TAC GAC CTC TTG GCG TAG CCC GTC CTC GAC GAC TAA GTC CAC AAG TTA
V I R M L E N R I G Q E L L I Q V F N
1510 1520 1530 1540 1550
* * * * *
CAA TTG GCT TTG GCT TCT AGT GCG GCA ACG ACG AAG ATC GGT GCA GGA CTC TGG TCT
GTT AAC CGA AAC CGA AGA TCA CGC CGT TGC TGC TTC TAG CCA CGT CCT GAG ACC AGA
Q L A L A S S A A T T K I G A G L W S
1570 1580 1590 1600 1610
* * * * *
CTG CTC ATC TCG AAC CAA CAT TTT TAT CAA GGC CAT CTT CAC GTA ACC GGA AAA GAT
GAC GAG TAG AGC TTG GTT GTA AAA ATA GTT CCG GTA GAA GTG CAT TGG CCT TTT CTA
L L I S N Q H F Y Q G H L H V T G K D
1630 1640 1650 1660 1670
TCT GTC TTC ATG GAC CAG TGG GTG CGC ACT GGA GGG CAC GCC AAG TTT TCG CTC ACA
AGA CAG AAG TAC CTG GTC ACC CAC GCG TGA CCT CCC GTG CGG TTC AAA AGC GAG TGT
S V F M D Q W V R T G G H A K F S L T
1690 1700 1710 1720 1730
* * * * *
GTG TTC AAT CGC AAG AGA AAC ACG ATT GAA CTG GAA ATC CGC CAG GAC TAT GTT AAT
CAC AAG TTA GCG TTC TCT TTG TGC TAA CTT GAC CTT TAG GCG GTC CTG ATA CAA TTA
V F N R K R N T I E L E I R Q D Y V N
1750 1760 1770 1780 1790
* * * * *
CGG GGA ATT AGA AAA TAC AAT GGT CCA TTG ATG GTG CAG CTG CAG GAG TTG GAT GGA
GCC CCT TAA TCT TTT ATG TTA CCA GGT AAC TAC CAC GTC GAC GTC CTC AAC CTA CCT
R G I R K Y N G P L M V Q L Q E L D G
1810 1820 1830 1840 1850
* * * * *
TTT AAG CAC ACA TTG CAG ATT GAG AGT ACC CTG GTA AAG TCC GAT ATC ACT TGT CAC
AAA TTC GTG TGT AAC GTC TAA CTC TCA TGG GAC CAT TTC AGG CTA TAG TGA ACA GTG
F K H T L Q I E S T L V K S D I T C H 1870 1880 1890 1900 1910
* * * * *
AAG AGC AGG CGT AAC AAA AAG AAG AAG ATC CCC TTG TGC ACC GGT GAG GAA GTG GAT
TTC TCG TCC GCA TTG TTT TTC TTC TTC TAG GGG AAC ACG TGG CCA CTC CTT CAC CTA
K S R R N K K K K I P L C T G E E V D
1930 1940 1950 1960 1970
* * * * *
GAT TTA TCA GCC ATG GAC GAC TCA CCT GTG CTT TGG ATC CGC CTC GAT CCC GAA ATG
CTA AAT AGT CGG TAC CTG CTG AGT GGA CAC GAA ACC TAG GCG GAG CTA GGG CTT TAC
D L S A M D D S P V L W I R L D P E M
1990 2000 2010 2020 2030
* * * * *
CTG CTG CGC GAC CTC ATA ATC GAA CAG CCC GAC TTC CAG TGG CAG TAT CAG CTT CGG
GAC GAC GCG CTG GAG TAT TAG CTT GTC GGG CTG AAG GTC ACC GTC ATA GTC GAA GCC
L L R D L I I E Q P D F Q W Q Y Q L R
2050 2060 2070 2080 2090
* * * * *
GAA CGT GAT GTT ACT GCT CAA TTT CAG GCG ATT CAA GCC CTG CAA AAG TAC CCC ACG
CTT GCA CTA CAA TGA CGA GTT AAA GTC CGC TAA GTT CGG GAC GTT TTC ATG GGG TGC
E R D V T A Q F Q A I Q A L Q K Y P T
2110 2120 2130 2140 2150
GCC ACC AGG CTT GCT TTA ACC GAC ACC ATA GAA AGC GAA CGT TGC TTC TAT CAG GTG
CGG TGG TCC GAA CGA AAT TGG CTG TGG TAT CTT TCG CTT GCA ACG AAG ATA GTC CAC
A T R L A L T D T I E S E R C F Y Q V
2170 2180 2190 2200 2210
* * * * *
TGC GAG GCA GCC CAC AGC TTG ACC AAA GTG GCC AAC CAG ATG GTG GCC TCC TGG AAGT
ACG CTC CGT CGG GTG TCG AAC TGG TTT CAC CGG TTG GTC TAC CAC CGG AGG ACC TCA
C E A A H S L T K V A N Q M V A S W S
2230 2240 2250 2260 2270
* * * * *
CCG CCC GCC ATG CTG AAC ATA TTT AGG AAG TTT TTC GGC TCA TTT AGT GCT CCG CAC
GGC GGG CGG TAC GAC TTG TAT AAA TCC TTC AAA AAG CCG AGT AAA TCA CGA GGC GTG
P P A M L N I F R K F F G S F S A P H
2290 2300 2310 2320 2330
* * * * *
ATC AAA CTG AAC AAC TTC TCC AAC TTT CAG CTG TAC TTC CTG CAG AAG GCT ATT CCC
TAG TTT GAC TTG TTG AAG AGG TTG AAA GTC GAC ATG AAG GAC GTC TTC CGA TAA GGG
I K L N N F S N F Q L Y F L Q K A I P
2350 2360 2370 2380 2390
* * * * *
GCC ATG GCA GGT CTG CGC ACA TCT CAT GGT ATT TGC CCG CCG GAA GTG ATG CGT TTT
CGG TAC CGT CCA GAC GCG TGT AGA GTA CCA TAA ACG GGC GGC CTT CAC TAC GCA AAA
A M A G L R T S H G I C P P E V M R F
2410 2420 2430 2440 2450
* * * * *
TTC GAT CTC TTC AAG TAC AAC GAG AAT TCG CGT AAC CAT TAC ACG GAT GCA TAC TAC
AAG CTA GAG AAG TTC ATG TTG CTC TTA AGC GCA TTG GTA ATG TGC CTA CGT ATG ATG
F D L F K Y N E N S R N H Y T D A Y
2470 2480 2490 2500 2510 GCA GCT TTG GTA GAA GCT CTA GGC GAA ACC TTA ACA CCT GTG GTC TCC GTT GCT AT C
CGT CGA AAC CAT CTT CGA GAT CCG CTT TGG AAT TGT GGA CAC CAG AGG CAA CGA TAG
A A L V E A L G E T L T P V V S V A I
2530 2540 2550 2560 2570
* * * * *
GGC ACA CAA ATC ACT ACG GAC AGT CTA TCC ACG GAT GCG AAA CTT GTG CTA GAT GAA
CCG TGT GTT TAG TGA TGC CTG TCA GAT AGG TGC CTA CGC TTT GAA CAC GAT CTA CTT
G T Q I T T D S L S T D A K L V L D E
2590 2600 2610 2620 2630
* * * * *
ACA CGT CTG CTG AAC ATG GAG AAA CAT CTA CCC TCG TAC AAG TAC ATG GTG TCC GTG
TGT GCA GAC GAC TTG TAC CTC TTT GTA GAT GGG AGC ATG TTC ATG TAC CAC AGG CAC
T R L L N M E K H L P S Y K Y M V S V
2650 2660 2670 2680 2690
* * * * *
TGT CTG AAG GTC ATC CGG AAG CTG CAA AAA TTC GGT CAT CTG CCC TCA CTG CCG CAC ACA GAC TTC CAG TAG GCC TTC GAC GTT TTT AAG CCA GTA GAC GGG AGT GAC GGC GTG
C L K V I R K L Q K F G H L P S L P H
2710 2720 2730 2740 2750
* * * * *
TAC CGC AGC TAT GCC GAA TAT GGA ATA TAT CTC GAT CTC CGC ATT GCT GCT ATG GAG
ATG GCG TCG ATA CGG CTT ATA CCT TAT ATA GAG CTA GAG GCG TAA CGA CGA TAC CTC
Y R S Y A E Y G I Y L D L R I A A M E
2770 2780 2790 2800 2810
* * * * *
CTC GTG GAC TTT GTG AAA GTG GAT GGG CGC AGC GAG GAT TTG GAA CAT TTG ATT ACT
GAG CAC CTG AAA CAC TTT CAC CTA CCC GCG TCG CTC CTA AAC CTT GTA AAC TAA TGA
L V D F V K V D G R S E D L E H L I T
2830 2840 2850 2860 2870
* * * * *
CTG GAA ACT GAT CCG GAT CCG GCT GCT CGC CAT GCA CTG GCC CAA CTG CTG ATC GAT
GAC CTT TGA CTA GGC CTA GGC CGA CGA GCG GTA CGT GAC CGG GTT GAC GAC TAG CTA
L E T D P D P A A R H A L A Q L L I D
2890 2900 2910 2920 2930
* * * * *
CCG CCT TTC ACA CGC GAA TCT CGC AGC CGT CTG GAT AAA CCC AAT CTC GTG GAT CGT
GGC GGA AAG TGT GCG CTT AGA GCG TCG GCA GAC CTA TTT GGG TTA GAG CAC CTA GCA
P P F T R E S R S R L D K P N L V D R
2950 2960 2970 2980 2990
* * * * *
TGG TTC AGT ATT AAT CGC TTG CCC TAC GAT ACC CAA STG CGC TGC GAT ATT GTC GAT
ACC AAG TCA TAA TTA GCG AAC GGG ATG CTA TGG GTT SAC GCG ACG CTA TAA CAG CTA
W F S I N R L P Y D T Q X R C D I V D
3010 3020 3030 3040 3050
* * * * *
TAC TAC GCA CTG TAC GGA ACT AAG CGT CCG AAT TGC TTG CAG GCC GGC GAG AAC CAA
ATG ATG CGT GAC ATG CCT TGA TTC GCA GGC TTA ACG AAC GTC CGG CCG CTC TTG GTT
Y Y A L Y G T K R P N C L Q A G E N Q
3070 3080 3090 3100 3110
* * * * *
TTC TAC AAG GAT TTG ATG AAG GAC AAT AAT AGC AGT GTA GGC AGC GTA ACC GGC AGC AAG ATG TTC CTA AAC TAC TTC CTG TTA TTA TCG TCA CAT CCG TCG CAT TGG CCG TCG F Y K D L M K D N N S S V G S V T G S
3130 3140 3150 3160 3170
* * * * *
AAG AAG ACC AGT GAT TCA AAG TCA CAT TTG CCA ACA CCA ACG AAT ACT TTG GAC AAT
TTC TTC TGG TCA CTA AGT TTC AGT GTA AAC GGT TGT GGT TGC TTA TGA AAC CTG TTA
K K T S D S K S H L P T P T N T L D N
3190 3200 3210 3220 3230
* * * * *
CCA CAG GAG CGG CAA AAG CCG GCA ATG GTT ACC ATC AAG CGA ACG GCC ACA GAA GCA
GGT GTC CTC GCC GTT TTC GGC CGT TAC CAA TGG TAG TTC GCT TGC CGG TGT CTT CGT
P Q E R Q K P A M V T I K R T A T E A
3250 3260 3270 3280 3290
* * * * *
GAG GTG GGC GAT GAG ATT ATC AAG CTG GAA CGC AGC GAG GAG ATC ACC GTG CTA GAT CTC CAC CCG CTA CTC TAA TAG TTC GAC CTT GCG TCG CTC CTC TAG TGG CAC GAT CTA
E V G D E I I K L E R S E E I T V L D
3310 3320 3330 3340 3350
* * * * *
CCA GTT AAC GTG CAG GCC TAT GAC AGT GAG ACC AAA GTG AAT GCC CTG CAG GCA GAT
GGT CAA TTG CAC GTC CGG ATA CTG TCA CTC TGG TTT CAC TTA CGG GAC GTC CGT CTA
P V N V Q A Y D S E T K V N A L Q A D
3370 3380 3390 3400 3410
* * * * *
GAA GCA CGT GAT ACC CAT CAG GCT GCC AAG CGC CTT AAG AAC GAA ATG TAC GCC GAG
CTT CGT GCA CTA TGG GTA GTC CGA CGG TTC GCG GAA TTC TTG CTT TAC ATG CGG CTC
E A R D T H Q A A K R L K N E M Y A E
3430 3440 3450 3460 3470
* * * * *
GAT AAC TCA TCC ACA ATG CTC GAC GTG GGC GAC TCC ACC AGA TAT GAG AGT AGC CAC
CTA TTG AGT AGG TGT TAC GAG CTG CAC CCG CTG AGG TGG TCT ATA CTC TCA TCG GTG
D N S S T M L D V G D S T R Y E S S H
3490 3500 3510 3520 3530
* * * * *
GAG GGC AAA TTG AAG TCC GGC GAT GGT GGG CTC AAG AAG AAA AAG AAG AAG GAG AAG
CTC CCG TTT AAC TTC AGG CCG CTA CCA CCC GAG TTC TTC TTT TTC TTC TTC CTC TTC
E G K L K S G D G G L K K K K K K E K
3550 3560 3570 3580 3590
* * * * *
AAG CAT AAG CAC AAA CVC AAG CAT AGG CAC AGC AAG GAC AAG GAC AAG GAG CGA AAG
TTC GTA TTC GTG TTT GBG TTC GTA TCC GTG TCG TTC CTG TTC CTG TTC CTC GCT TTC
K H K H K X K H R H S K D K D K E R K
3610 3620 3630 3640 3650
* * * * *
AAG GAC AAG CGT GAC CCG CAT ATA TTC ACC CTG CAG GCG CGC GAG ACA GCC ACT CCG TTC CTG TTC GCA CTG GGC GTA TAT AAG TGG GAC GTC CGC GCG CTC TGT CGG TGA GGC
K D K R D P H I F T L Q A R E T A T P
3670 3680 3690 3700 3710
* * * * *
ACT CTC AGC TCG GAG GAC AGT AGC AAC AGC AAT AGC CTG CCG CCC ATG AAC CTT AAC
TGA GAG TCG AGC CTC CTG TCA TCG TTG TCG TTA TCG GAC GGC GGG TAC TTG GAA TTG
T L S S E D S S N S N S L P P M N L N 3730 3740 3750 3760 3770
* * * * *
GTG AGG GTT CCT ACA GGT GGG GAA ATT GCA ATG TTT GGG GGA TAG ATG ACA GAA TAA
CAC TCC CAA GGA TGT CCA CCC CTT TAA CGT TAC AAA CCC CCT ATC TAC TGT CTT ATT
V R V P T G G E I A M F G G * M T E *
3790 3800 3810 3820
* * * *
TAT AAT ACC TTA AAA AAA AAA AAA AAA AAA AAA AAA AAA A ATA TTA TGG AAT TTT TTT TTT TTT TTT TTT TTT TTT TTT T Y N T L K K K K K K K K K X>
LOCUS TRANSLDTAF 1217 AA PROT
FEATURES From To/Span Description
Peptide 1 > 1217 67 to 3820 of dTAF150 (translated)
[Split]
< 1218 1218 67 to 3820 of dTAF150 (translated)
[Split]
1 METQPEVPEV PLRPFKLAHQ WSLTGISFE RRSIIGVVEL TIVPNSENLR LIRLNAKQLR
61 IYSWLNDVC QADFTYFDPF QNICYKEPKS RALEVYSKHH LTAAQYTDPD VNNGELLIQV
121 PPEGYSMIQE GQGLRIRIEF SLENPKCGVH FVIPPASTDE ETQMNSSHMF TNCYENSSRL
181 WFPCVDSFAD PCTWRLEFTV DKNMTAVSCG ELLEVIMTPD LRKKTFHYSV STPVCAPNIA
241 LAVGQFEIYV DPHMHEVTHF CLPGLLPLLK NTVRYLHEAF EFYEETLSTR YPFSCYKQVF
301 VDELDTDISA YATMSIASVN LLHSIAIIDQ TYISRTFMSR AVAEQFFGCF ITSHHWSDTW
361 LAKGIAEYLC GLYSRKCFGN NEYRAWVQSE LARWRYEEQ YGGIILDCSQ PPAPLPVSGT
421 NQSAASSKQQ EIVHYFPIKS LHTVSPKYVE AMRRKAHFVI RMLENRIGQE LLIQVFNKQL
481 ALASSAATTK IGAGLWSQLL ISNQHFYQGH LHVTGKDMSV FMDQWVRTGG HAKFSLTSVF
541 NRKRNTIELE IRQDYVNQRG IRKYNGPLMV QLQELDGTFK HTLQIESTLV KSDITCHSKS
601 RRNKKKKIPL CTGEEVDMDL SAMDDSPVLW IRLDPEMILL RDLIIEQPDF QWQYQLRHER
661 DVTAQFQAIQ ALQKYPTNAT RLALTDTIES ERCFYQVRCE AAHSLTKVAN QMVASWSGPP
721 AMLNIFRKFF GSFSAPHIIK LNNFSNFQLY FLQKAIPVAM AGLRTSHGIC PPEVMRFLFD
781 LFKYNENSRN HYTDAYYRAA LVEALGETLT PWSVAIHGT QITTDSLSTD AKLVLDEVTR
841 LLNMEKHLPS YKYMVSVSCL KVIRKLQKFG HLPSLPHIYR SYAEYGIYLD LRIAAMECLV
901 DFVKVDGRSE DLEHLITLLE TDPDPAARHA LAQLLIDNPP FTRESRSRLD KPNLVDRLWF
961 SINRLPYDTQ XRCDIVDLYY ALYGTKRPNC LQAGENQSFY KDLMKDNNSS VGSVTGSFKK
1021 TSDSKSHLPT PTNTLDNEPQ ERQKPAMVTI KRTATEAFEV GDEIIKLERS EEITVLDEPV
1081 NVQAYDSETK VNALQADEEA RDTHQAAKRL KNEMYAEDDN SSTMLDVGDS TRYESSHEEG
1141 KLKSGDGGLK KKKKKEKKKH KHKXKHRHSK DKDKERKDKD KRDPHIFTLQ ARETATPDTL
1201 SSEDSSNSNS LPPMNLN
gequence Range : 1 to 872
10 20 30 40 50 60 * * * * * *
CCAAAAATCC GCCCAACTTA CTGTACTTTC CCCAAACACT TCCAACCAAC CGACCTACCA GGTTTTTAGG CGGGTTGAAT GACATGAAAG GGGTTTGTGA AGGTTGGTTG GCTGGATGGT
70 80 90 100 110
* * * * *
CCCACTTGAT TTGACTCTGA AGAAACCCAA AAGCA ATG TCG GAT CTC TTT ACC ACT GGGTGAACTA AACTGAGACT TCTTTGGGTT TTCGT TAC AGC CTA GAG AAA TGG TGA
M S D L F T T>
TRANSLATION OF 802 F >
120 130 140 150 160
* * * * *
TTC GAT AGC AAC GGC GTC GCG AGG CAC CAC CTG CAC CAC AAC CAC AAC
AAG CTA TCG TTG CCG CAG CGC TCC GTG GTG GAC GTG GTG TTG GTG TTG
F D S N G V A R H H L H H N H N>
a a a a TRANSLATION OF 802 FULL [A] a a a a >
170 180 190 200 210
* * * * *
TCC ACA TCG TCC GCC AGC GGA CTG CTC CAC GAC CCA CCC ATG GCC TCG
AGG TGT AGC AGG CGG TCG CCT GAC GAG GTG CTG GGT GGG TAC CGG AGC
S T S S A S G L L H D P P M A S>
a a a a TRANSLATION OF 802 FULL [A] a a a >
220 230 240 250 260
*
CCC TCC CAG CAC AGT CCG ATG ACC AAC AAC AGC AAC TCA TCC TCG CAG GGG AGG GTC GTG TCA GGC TAC TGG TTG TTG TCG TTG AGT AGG AGC GTC P S Q H S P M T N N S N S S S Q>
a a a a TRANSLATION OF 802 FULL [A] a a a a >
270 280 290 300
* * * *
AAC GGC GGA CCG GTT TCC GGT TTG GGT ACG GGA ACG GGC CCC ATA TCT
TTG CCG CCT GGC CAA AGG CCA AAC CCA TGC CCT TGC CCG GGG TAT AGA
N G G P V S G L G T G T G P S>
a a a a TRANSLATION OF 802 FULL [A] a a a
310 320 330 340 350
GGT GGT AGC AAG TCA TCC AAT CAC ACA TCA TCC GCC GCC GGT TCC GAG CCA CCA TCG TTC AGT AGG TTA GTG TGT AGT AGG CGG CGG CCA AGG CTC G G S K S S N H T S S A A G S E>
a a a a TRANSLATION OF 802 FULL [A] a a a a >
360 370 380 390 400
* * * * *
AAC ACT CCC ATG CTT ACC AAA CCG CGT CTC ACA GAG CTC GTC CGA GAG TTG TGA GGG TAC GAA TGG TTT GGC GCA GAG TGT CTC GAG CAG GCT CTC N T P M L T K P R L T E L V R E>
a a a a TRANSLATION OF 802 FULL [A] a a a a >
410 420 430 440 450
GTG GAT ACC ACC ACG CAG CTG GAC GAG GAT GTT GAG GAG CTT CTG CTT CAC CTA TGG TGG TGC GTC GAC CTG CTC CTA CAA CTC CTC GAA GAC GAA V D T T T Q L D E D V E E L L L>
____a____a____a____a_TRANSLATION OF 802 FULL [A]_a____ a_____ a_____ a_____ > ( Fig 8 (2 kg) 460 470 480 4 90 500
CAG ATC ATC GAC GAC TTT GTG AGG GAC ACC GTC AAG TCG ACG AGC GCC GTC TAG TAG CTG CTG AAA CAC TCC CTG TGG CAG TTC AGC TGC TCG CGG Q I I D D F V R D T V K S T S A> a a a a TRANSLATION OF 802 FULL [A ] a a a a >
510 520 530 540
*
TTC GCC AAG CAC CGA AAG TCT AAC AAG ATC GAG GTG CGC GAC GTG CAG AAG CGG TTC GTG GCT TTC AGA TTG TTC TAG CTC CAC GCG CTG CAC GTC F A K H R K S N K I E V R D V Q> a a a a TRANSLATION OF 802 FULL [A] a a a a >
550 560 570 580 590
* * * * *
CTG CAC TTT GAG CGG AAG TAC AAC ATG TGG ATA CCC GGC TTC GGT ACG GAC GTG AAA CTC GCC TTC ATG TTG TAC ACC TAT GGG CCG AAG CCA TGC L H F E R K Y N M W I P G F G T> a a a a TRANSLATION OF 802 FULL [A] a a a a >
600 610 620 630 640
GAC GAA CTG CGT CCC TAC AAG CGG GCA GCT GTC ACG GAG GCG CAC AAA CTG CTT GAC GCA GGG ATG TTC GCC CGT CGA CAG TGC CTC CGC GTG TTT D E L R P Y K R A A V T E A H K> a a a a TRANSLATION OF 802 FULL [A] a a a a >
650 660 670 680 690
* * * * *
CAG CGC CTT GCC CTC ATA CGG AAA ACG ATC AAG AAA TAC TAG AGGA GTC GCG GAA CGG GAG TAT GCC TTT TGC TAG TTC TTT ATG ATC TCCT Q R L A L I R K T I K K Y *>
a a a TRANSLATION OF 802 FULL [A] a a a >
700 710 720 730 740 750
* * *
TTGGATCTAA TCGGGTCGAG GCTCTGTTTC GGTTTGCCGG ATTTCGCGTA TGCTAAACGT AACCTAGATT AGCCCAGCTC CGAGACAAAG CCAAACGGCC TAAAGCGCAT ACGATTTGCA
760 770 780 790 800 810
* * * * * *
GCACACGCCA CAAACTAATT TAAGCTCCAA TTTAGATTAA ATAACAAATT ATCGTCGCTC CGTGTGCGGT GTTTGATTAA ATTCGAGGTT AAATCTAATT TATTGTTTAA TAGCAGCGAG
820 830 840 850 860 870
* * * * * *
TATTGTAGAT TTATTGTAAT AAAAGTGCAC TATTGATTTC ACATTCAAAA AAAAAAAAAA ATAACATCTA AATAACATTA TTTTCACGTG ATAACTAAAG TGTAAGTTTT
AA TT Sequence Range : 1 to 739
Figure imgf000161_0001
10 20 30 40 50
* * * * *
CCCCCCCCCC CCCCCCCCGA TTTTTTTTAA ATG GAC GAA ATC CTC TTT CCC ACG GGGGGGGGGG GGGGGGGGCT AAAAAAAATT TAC CTG CTT TAG GAG AAA GGG TGC
M D E I L F P T> TRANSLATION OF 911G FULL >
60 70 80 90 100
* * * * *
CAG CAA AAG AGC AAC TCC CTA AGC GAC GGC GAC GAT GTC GAC CTG AAA GTC GTT TTC TCG TTG AGG GAT TCG CTG CCG CTG CTA CAG CTG GAC TTT Q Q K S N S L S
Figure imgf000161_0002
G
Figure imgf000161_0003
V
Figure imgf000161_0004
L K> a a a TRANSLATION OF 911G FULL 5/20 [A] a a a >
110 120 130 140 150
* * * * *
TTC TTC CAG TCG GGC CTC CGG GGG AGG CGA AAG GAC AGC GAC ACC TCG AAG AAG GTC AGC CCG GAG GCC CCC TCC GCT TTC CTG TCG CTG TGG AGC F F Q S G L R G R R K
Figure imgf000161_0005
( S
Figure imgf000161_0006
T S> a a a TRANSLATION OF 911G FULL 5/20 [A] a a a >
160 170 180 190
* * * *
GAT CCG GGA AAC GAT GCG GAT CGT GAT GGC AAA GAT GCG GAT GGG GAC CTA GGC CCT TTG CTA CGC CTA GCA CTA CCG TTT CTA CGC CTA CCC CTG P G N
Figure imgf000161_0007
A
Figure imgf000161_0008
R
Figure imgf000161_0009
G K
Figure imgf000161_0010
A
Figure imgf000161_0011
G
Figure imgf000161_0012
a a a TRANSLATION OF 911G FULL 5/20 [A] a a a >
200 210 220 230 240
* * * * *
AAC GAC AAC AAG AAC ACG GAC GGA GAT GGT GAC TCT GGC GAG CCG GCG
TTG CTG TTG TTC TTG TGC CTG CCT CTA CCA CTG AGA CCG CTC GGC CGC
N
Figure imgf000161_0013
N K N T
Figure imgf000161_0014
G
Figure imgf000161_0015
G
Figure imgf000161_0016
S G
Figure imgf000161_0017
P A> a a a TRANSLATION OF 911G FULL 5/20 [A] a a a >
250 260 270 280 290
* * * * *
CAC AAA AAG CTC AAA ACC AAG AAG GAA CTG GAG GAG GAG GAG CGC GAA GTG TTT TTC GAG TTT TGG TTC TTC CTT GAC CTC CTC CTC CTC GCG CTT H K K L K T K K E L E E E E R E> a a a TRANSLATION OF 911G FULL 5/20 [A] a a a >
300 310 320 330 340
* * * * *
CGA ATG CAG GTT CTC GTT TCC AAC TTT ACT GAA GAA CAG CTG GAT CGC GCT TAC GTC CAA GAG CAA AGG TTG AAA TGA CTT CTT GTC GAC CTA GCG R M Q V L V S N F T E E Q L D R> a a a TRANSLATION OF 911G FULL 5/20 [A] a a a >
350 360 370 380 390
* * * * *
TAC GAA ATG TAT CGT CGC TCA GCC TTT CCC AAG GCC GCC GTC AAG CGT ATG CTT TAC ATA GCA GCG AGT CGG AAA GGG TTC CGG CGG CAG TTC GCA Y E M Y R R S A F P K A A V K R> a a a TRANSLATION OF 911G FULL 5/20 [A] a a a >
400 410 420 430
* * * *
CTA ATG CAA ACT ATC ACC GGC TGT TCC GTG TCC CAA AAT GTT GTG ATA GAT TAC GTT TGA TAG TGG CCG ACA AGG CAC AGG GTT TTA CAA CAC TAT L M Q T I T G C S V S Q N V V I> a a a TRANSLATION OF 911G FULL 5/20 [A] a a a >
440 450 460 470 480
* * * * *
GCC ATG TCC GGC ATT GCG AAG GTC TTC GTC GGC GAG GTT GTG GAG GAA CGG TAC AGG CCG TAA CGC TTC CAG AAG CAG CCG CTC CAA CAC CTC CTT A M S G I A K V F V G E V V E E> a a a TRANSLATION OF 911G FULL 5/20 [A] a a a >
490 500 510 520 530
* * * * *
GCC CTC GAC GTG ATG GAG GCC CAA GGT GAA TCC GGT GCC CTG CAG CCC CGG GAG CTG CAC TAC CTC CGG GTT CCA CTT AGG CCA CGG GAC GTC GGG A L D V M E A Q G E S G A L Q P> a a a TRANSLATION OF 911G FULL 5/20 [A] a a a >
540 550 560 570 580
* * * * *
AAA TTC ATA CGA GAG GCA GTG CGA CGA CTG AGG ACC AAG GAT CGG ATG TTT AAG TAT GCT CTC CGT CAC GCT GCT GAC TCC TGG TTC CTA GCC TAC K F I R E A V R R L R T K D R M> a a a TRANSLATION OF 911G FULL 5/20 [A] a a a >
590 600 610 620 630
* * * * *
CCC ATA GGC AGA TAC CAG CAG CCC TAT TTC AGA CTG AAC TAG C GAGTC GGG TAT CCG TCT ATG GTC GTC GGG ATA AAG TCT GAC TTG ATC G CTCAG P I G R Y Q Q P Y F R L N * X> a a TRANSLATION OF 911G FULL 5/20 [A] a a a >
640 650 660 670 680 690
* * * * * *
GAGACATTAA GAAATATAGT TTGTAAATCT GTTAGTGAAT ATAAAAATAC ATAAACAAGT CTCTGTAATT CTTTATATCA AACATTTAGA CAATCACTTA TATTTTTATG TATTTGTTCA
700 710 720 730
* * * *
AAAAAGTAAA TAAATATAAA GATTTTTTCA AGAAAAAAAA AAAAAAAAG TTTTTCATTT ATTTATATTT CTAAAAAAGT TCTTTTTTTT TTTTTTTTC
10 20 30 40
* * * *
ACC ATG TTG CTT CCG AAC ATC CTG CTC ACC GGT ACA CCA GGG GTT GGA TGG TAC AAC GAA GGC TTG TAG GAC GAG TGG CCA TGT GGT CCC CAA CCT
50 60 70 80 90
* * * * *
AAA ACC ACA CTA GGC AAA GAA CTT GCG TCA AAA TCA GGA CTG AAA TAC TTT TGG TGT GAT CCG TTT CTT GAA CGC AGT TTT AGT CCT GAC TTT ATG
100 110 120 130 140
* * * * *
ATT AAT CTG GGT GAT TTA GCT CGA GAA GTC TGA TCA TCG GAT ATC ATG TAA TTA CAC CCΛ CTA AAT CGA GCT CTT CAG ACT AGT AGC CTA TAG TAC
M>
150 160 170 180 190 * * * * *
GAG TCT GGC AAG ACG GCT TCT CCC AAG AGC ATG CCG AAA GAT GCA CAG CTC AGA CCG TTC TGC CGA AGA GGG TTC TCG TAC GGC TTT CTA CGT GTC
E S G K T A S P K S M P K D A Q>
200 210 220 230 240 * * * * *
ATG ATG GCA CAA ATC CTG AAG GAT ATG GGG ATT ACA GAA TAT GAG CCA
TAC TAC CCT GTT TAG GAC TTC CTA TAC CCC TAA TGT CTT ATA CTC GGT
M M A Q I L K D M G I T E Y E P>
250 260 270 280 * * * *
AGA GTT ATA AAT CAG ATG TTG GAC TTT GCC TTC CGA TAT GTC ACC ACA
TCT CAA TAT TTA GTC TAC AAC CTC AAA CGG AAG GCT ATA CAC TGG TGT
R V I W Q M L E F A F R Y V T T>290 300 310 320 330
* * * * *
ATT CTA GAT GAT GCA AAA ATT TAT TCA AGC CAT GCT AAC AAA GCT ACT
TAA GAT CTA CTA CGT TTT TAA ATA ACT TCG GTA CGA TTC TTT CGA TCA
I L D D A K I Y S S H A K K A T>
340 350 360 370 380
* * * * *
GTT GAT GCA GAT GAT GTG CGA TTG GCA ATC CAG TGC CGC GCT GAT CAG
CAA CTA CGT CTA CTA CAC GCT AAC CGT TAG CTC ACG GCG CGA CTA GTC
V D A D D V R L A I Q C R A D Q>
390 400 410 420 430 * * * * *
TCT TTT ACC TCT CCT CCC CCA AGA GAT TTT TTA TTA GAT ATT GCA AGG AGA AAA TGG AGA GGA GGG GGT TCT CTA AAA AAT AAT CTA TAA CGT TCC
S F T S P P P R D F L L D I A R>
440 450 460 470 480
* * * * *
CAA AGA AAT CAA ACC CCT TTG CCA TTG ATC AAG CCA TAT TCA GGT CCT
GTT TCT TTA GTT TGG GGA AAC GGT AAC TAG TTC GGT ATA AGT CCA GGA
Q R N Q T P L P L I K P Y S G P>
490 500 510 520 * * * * AGC TTG CCA CCT GAT AGA TAC TGC TTA ACA GCT CCA AAC TAT AGG CTG
TCC AAC GGT GGA CTA TCT ATG ACG AAT TGT CGA GGT TTC ATA TCC GAC
R L P P D R Y C L T A P N Y R L>
530 540 550 560 570
* * * * *
AAA TCT TTA CAG AAA AAG GCA TCA ACT TCT GCG GGA AGA ATA ACA GTC
TTT AGA AAT GTC TTT TTC CGT AGT TGA AGA CGC CCT TCT TAT TCT CAG
K S L Q K K A S T S A G R I T V>
580 590 600 610 620 * * * * *
CCG CGG TTA AGT GTT GGT TCA GTT ACT AGC AGA CCA AGT ACT CCC ACA
GGC GCC AAT TCA CAA CCA AGT CAA TGA TCG TCT GGT TCA TGA GGG TGT
P R L S V G S V T S R P S T P T>
630 640 650 660 670 * * * * *
CTA GGC ACA CCA ACC CCA CAG ACC ATG TCT GTT TCA ACT AAA GTA GGG GAT CCG TGT GGT TGG GGT GTC TGG TAC AGA CAA AGT TGA TTT CAT CCC
L G T P T P O T M S V S T K V G>
680 690 700 710 720 * * * * *
ACT CCC ATC TCC CTC ACA GGT CAA AGC TTT ACA GTA CAG ATG CCT ACT
TGA GGG TAC AGG GAG TGT CCA GTT TCC AAA TGT CAT GTC TAC GGA TGA
T P M S L T G Q R F T V Q M P T>
730 740 750 760
* * * *
TCT CAG TCT CCA GCT GTΛ ΛΛλ GCT TCA ATT CCT GCA ACC TCA GCA GTT
AGA GTC AGA GGT CGA CAT TTT CGA AGT TAA GGA CGT TGG AGT CGT CAA
S Q S P A V K A S I P A T S A V>
770 780 790 800 810
* * * * *
CAG AAT GTT CTG ATT AAT CCA TCA TTA ATC GGG TCC AAA AAC ATT CTT
GTC TTA CAA GAC TAA TTA GGT AGT AAT TAG CCC AGG TTT TTG TAA GAA
Q N V L I N P S L I G S K N I L>
820 830 840 850 860
* * * * *
ATT ACC ACT AAT ATG ATG TCA TCA CAA AAT ACT GCC AAT GAA TCA TCA
TAA TGG TGA TTA TAC TAC AGT AGT GTT TTA TGA CGG TTA CTT AGT AGT
I T T N M M S S Q N T A N E S S>
870 880 890 900 910 * * * * *
AAT GCA TTG AAA AGA AAA CGT GAA GAT GAT GAT GAT GAC GAT GAT GAT TTA CGT AAC TTT TCT TTT GCA CTT CTA CTA CTA CTA CTG CTA CTA CTA
N A L K R K R E D D D D D D D D>
920 930 940 950 960 * * * * *
GAT GAT GAC TAT GAT AAT CTG TAA TCT AGC CTT GCT GAA TGT AAC ATG CTA CTA CTG ATA CTA TTA GAC ATT AGA TCG GAA CGA CTT ACA TTG TAC D D D Y D N L>
970 980 990 1000 * * * *
TAT ACT TGG TCT TGA ATT CAT TGT ACT GAT ATT AAA CAT GCA TGC TGG ATA TGA ACC AGA ACT TAA GTA ACA TGA CTA TAA TTT GTA CGT ACG ACC 1010 1020 1030 1040 1050
* * * * *
ATG TTT TCA AGT TGT GTT TTA GAA AAC TAA TAA TAA TGA GTA AAC ACA TAC AAA AGT TCA ACA CAA AAT CTT TTC ATT ATT ATT ACT CAT TTG TGT
1060 1070 1080 1090 1100
* * * * *
GTT ACC ATA CTT TTC AAT TGA AAT GAA GGT TTT TCA TCA GCC TTA AAA CAA TGG TAT GAA AAG TTA ACT TTA CTT CCA AAA AGT ACT CGG AAT TTT
1110 1120 1130 1140 1150 * * * * *
GTG TAA GAA AAA TAA AGT TGT CAT TCA TTC GAT AAA AAA AAA AAA A CAC ATT CTT TTT ATT TCA ACA GTA AGT AAG CTA TTT TTT TTT TTT T
hTAFII30α peptides: ( SEQ ID NO 27 )
1. DVQLHLERQ_NM_IPGFGSEEI_PYK
2. KKLQDLVREVDPNEQLDEDV_EMLLQIADD
3. LQDLVREVDPN TAFII30β peptides: ( SEQ ID NO 28 )
1. VFVGEVVEEALDVEEKP
2. HMREAVRRLK
3. MQILVSSFEEEQLN_YEMYN_K_AYGQ
hTAF I 48 -> Genes
DNA sequence 1578 b . p . ATTCCAAGCTAA . . . GTCTGTTTTCTT l i near
Read f rom Bionet / I ntelligenetics f ile " 4 8 prot "
1 ATTCCAAGCTAAATTTAGGCGGGT ATG AGT GAT TTC AGT GAA GAA TTA AAA GGG CCT GTG ACA GAT 66
1 M S D F S E E L K G P V T D 1 4
67 GAT GAA GAA GTG GAA ACA TCT GTG CTC AGT GGT GCA GGA ATG CAT TTT CCT TGG CTT CAA 1 26
15 D E E V E T S V L S G A G M H F P W L Q 34
127 ACA TAC GTA GAA ACT GTG GCC ATT GGA GGG AAA AGG AGG AAG GAT TTT GCT CAG ACA ACA 1 86
35 T Y V E T V A I G G K R R K D F A Q T T 54
187 AGT GCT TGT TTA AGT TTT ATC CAA GAA GCT CTG CTG AAG CAC CAA TGG CAG CAA GCT GCA 24 6
55 S A C L S F I Q E A L L K H Q W Q Q A A 74
247 GAA TAC ATG TAC AGT TAT TTT CAG ACC TTG GAA GAT TCA GAT AGC TAC AAA AGG CAG GCT 306
75 E Y M Y S Y F Q T L E D S D S Y K R Q A 94
307 GCA CCT GAG ATT ATT TGG AAG CTC GGA AGT GAA ATT CTA TTT TAT CAT CCC AAA AGC AAC 366
95 A P E I I W K L G S E I L F Y H P K S N 1 1 4
367 ATG GAG AGT TTC AAT ACT TTT GCT AAC CGG ATG AAA AAT ATT GGC GTC ATG AAT TAT TTA 426 115 M E S F N T F A N R M K N I G V M N Y L 1 34
427 AAG ATC TCC TTA CAA CAT GCA TTA TAC CTT CTG CAT CAT GGA ATG CTT AAA GAT GCT AAG 4 86
135 K I S L Q H A L Y L L H H G M L K D A K 154
487 AGA AAT CTG AGT GAG GCA GAG ACA TGG AGA CAT GGT GAA AAT ACG TCT TCC CGG GAA ATA 54 6 155 R N L S E A E T W R H G E N T S S R E I 1 74
547 TTA ATC AAC CTT ATT CAG GCC TAT AAA GGG CTT TTA CAG TAT TAT ACC TGG TCT GAA AAG 606
175 L I N L I Q A Y K G L L Q Y Y T W S E K 1 94
607 AAG ATG GAA TTG TCA AAG CTT GAT AAG GAT GAT TAT GCT TAC AAT GCA GTA GCC CAG GAT 666
1 95 K M E L S K L D K D D Y A Y N A V A Q D 21 4
667 GTG TTC AAC CAC AGC TGG AAG ACA TCT GCA AAT ATT TCT GCA TTG ATT AAA ATT CCT GGA 726
215 V F N H S W K T S A N I S A L I K I P G 234
727 GTT TGG GAC CCT TTT GTG AAG AGT TAT GTA GAA ATG CTG GAA TTC TAT GGG GAT CGA GAT 786
235 V W D P F V K S Y V E M L E F Y G D R D 254
787 GGA GCC CAA GAG GTA CTC ACC AAT TAT GCA TAT GAT GAA AAG TTT CCA TCA AAT CCA AAT 84 6
255 G A Q E V L T N Y A Y D E K F P S N P N 274
847 GCC CAT ATC TAC TTA TAC AAC TTT CTA AAG AGA CAG AAG GCA CCA AGA TCA AAA TTG ATA 906
275 A H I Y L Y N F L K R Q K A P R S K L I 294
907 AGT GTG CTT AAG ATT TTG TAT CAG ATT GTA CCA TCT CAT AAA TTG ATG TTG GAA TTC CAT 966
295 S V L K I L Y Q I V P S H K L M L E F H 314
967 ACA TTA CTT AGA AAA TCA GAA AAA GAA GAA CAC CGT AAA CTG GGG TTG GAG GTA TTA TTT 1026
315 T L L R K S E K E E H R K L G L E V L F 334
1027 GGA GTC TTA GAT TTT GCC GGA TGC ACT AAG AAT ATA ACT GCT TGG AAA TAC TTG GCA AAA 1086
335 G V L D F A G C T K N I T A W K Y L A K 354
1087 TAT CTG AAA AAT ATC TTA ATG GGA AAC CAC CTT GCG TGG GTT CAA GAA GAG TGG AAC TCC 1 14 6
355 Y L K N I L M G N H L A W V Q E E W N S 374
1147 AGG AAA AAC TGG TGG CCA GGG TTT CAT TTC AGC TAC TTT TGG GCA AAA AGT GAT TGG AAG 1206
375 R K N W W P G F H F S Y F W A K S D W K 394
1207 GAA GAT ACA GCT TTG GCC TGT GAG AAA GCT TTT GTG GCT GGT TTA CTG TTA GGA AAA GGT 1266
395 E D T A L A C E K A F V A G L L L G K G 4 1 4
1267 TGT AGA TAT TTC CGG TAT ATT TTA AAG CAA GAT CAC CAA ATC TTA GGG AAG AAA ATT AAG 132 6
415 C R Y F R Y I L K Q D H Q I L G K K I K 4 34
1327 CGG ATG AAG AGA TCT GTG AAA AAA TAC AGT ATT GTA AAT CCA AGA CTC TGA TACTGAATTTTA 1389
435 R M K R S V K K Y S I V N P R L * 451
FIG 11 hTAF I 110 cDNA and deduced amino acid sequence
Dr . R . T j ian laboratory , Department of Molecular and Cell Biology ,
Univers ity of California , Berkeley .
10 20 30 40 50
* * * * *
GCTCGAGTGCCAAAGCTGGGGTTCTACTTGAGATTTCCCTCGTGGTGCCA
60 70 80 90 100
* * * * *
GGGTCCGGCGAGCATCACGCCGAGGCCCATTTTCCAGACGACCACGACGA
110 120 130 140 150
* * * * *
GGCCGGGGTCACGAACTCTGGCGCCCCTTACCAGCTTCCAGTCTCTCGAG
160 170 180 190 200
* * * * *
GTGGCCAGTGTGGTGCTTGGTCCTTGTTTCCAGGATGGACTTCCCCAGCT
M D F P S>
210 220 230 240 250
* * * * *
CCCTCCGCCCTGCGTTGTTTCTGACCGGCCCCCTTGGTCTGAGCGACGTC S L R P A L F L T G P L G L S D V>
260 270 280 290 300
* * * * *
CCTGACCTCTCTTTCATGTGCAGCTGGCGAGACGCACTGACTCTGCCAGA P D L S F M C S W R D A L T L P E>
310 320 330 340 350
* * * * *
GGCCCAGCCCCAGAACTCAGAGAATGGGGCACTGCATGTGACCAAGGACC A Q P Q N S E N G A L H V T K D>
360 370 380 390 400
* * * * *
TGCTGTGGGAGCCGGCAACCCCTGGGCCTCTCCCCATGCTGCCTCCCCTC L L W E P A T P G P L P M L P P L>
410 420 430 440 450
* * * * *
ATCGATCCCTGGGACCCTGGCCTGACTGCCCGGGACCTGCTTTTCCGCGG I D P W D P G L T A R D L L F R G>
460 470 480 490 500
* * * * *
AGGGTACCGGTATCGGAAGCGGCCCCGAGTCGTGCTGGATGTGACTGAGC G Y R Y R K R P R V V L D V T E>
Figure imgf000168_0001
510 520 530 540 550
* * * * *
AGATCAGCCGGTTCCTCTTGGATCATGGAGACGTAGCCTTTGCGCCCCTG Q I S R F L L D H G D V A F A P L>
560 570 580 590 600
* * * * *
GGGAAGCTGATGCTGGAGAATTTCAAGCTGGAGGGAGCGGGGAGCCGCAC G K L M L E N F K L E G A G S R T>
610 620 630 640 650
* * * * *
TAAGAAGAAGACAGTGGTCAGTGTGAAGAAGCTGCTCCAGGACCTCGGTG K K K T V V S V K K L L Q D L G >
660 670 680 690 700
* * * * *
GACACCAGCCCTGGGGGTGTCCCTGGGCTTACCTCAGCAACCGACAGCGC G H Q P W G C P W A Y L S N R O R>
710 720 730 740 750
* * * * *
CGCTTCTCTATCCTCGGGGGCCCCATCCTGGGCACGTCGGTGGCGAGCCA R F S I L G G P I L G T S V A S H>
760 770 780 790 800
* * * * *
CTTGGCAGAGCTGCTGCACGAGGAGCTGGTGCTGCGGTGGGAGCAGCTGC L A E L L H E E L V L R W E Q L >
810 820 830 840 850
* * * * *
TTCTGGATGAGGCCTGCACTGGGGGCGCGCTGGCCTGGGTTCCTGGAAGG L L D E A C T G G A L A W V P G R>
860 870 880 890 900
* * * * *
ACACCCCAGTTCGGGCAGCTGGTCTACCCTGCTGGAGGCGCCCAGGACAG T P Q F G Q L V Y P A G G A Q D R>
910 920 930 940 950
* * * * *
GCTGCATTTCCAAGAGGTCGTTCTGACCCCAGGTGACAATCCCCAATTCC L H F Q E V V L T P G D N P Q F >
960 970 980 990 1000
* * * * *
TTGGGAAACCTGGACGCATCCAGCTCCAGGGACCTGTCCGGCAAGTGGTG L G K P G R I Q L Q G P V R Q V V>
1010 1020 1030 1040 1050
* * * * *
ACATGCACCGTCCAGGGAGAAAGTAAGGCCCTTATATACACTTTCCTCCC T C T V Q G E S K A L I Y T F L P> 1060 1070 1080 1090 1100
* * * * *
TCACTGGCTGACCTGCTACCTGACCCCTGGCCCTTTCCATCCCTCCTCAG H W L T C Y L T P G P F H P S S >
1110 1120 1130 1140 1150
* * * * *
CTCTGCTGGCCGTCCGCTCTGACTACCACTGTGCCGTGTGGAAGTTTGGT A L L A V R S D Y H C A V W K F G>
1160 1170 1180 1190 1200
* * * * *
AAACAGTGGCAGCCAACCCTTCTGCAGGCGATGCAGGTGGAGAAAGGGGC K Q W Q P T L L Q A M Q V E K G A>
1210 1220 1230 1240 1250
* * * * *
CACGGGGATCAGCCTCAGCCCTCACCTGCCCGGGGAGCTGGCCATCTGCA T G I S L S P H L P G E L A I C >
1260 1270 1280 1290 1300
* * * * *
GCCGCTCGGGAGCCGTCTGCCTGTGGAGCCCTGAGGATGGGCTGCGGCAA S R S G A V C L W S P E D G L R Q>
1310 1320 1330 1340 1350
* * * * *
ATCTACAGGGACCCTGAGACCCTCGTGTTCCGGGACTCCTCTTCGTGGCG I Y R D P E T L V F R D S S S W R>
1360 1370 1380 1390 1400
* * * * *
TTGGGCAGACTTCACTGCGCACCCTCGGGTGCTGACCGTGGGTGACCGCA W A D F T A H P R V L T V G D R >
1410 1420 1430 1440 1450
* * * * *
CCGGAGTGAAGATGCTGGACACTCAGGGCCCGCCGGGCTGTGGTCTGTTG T G V K M L D T Q F P P F C G L L>
1460 1470 1480 1490 1500
* * * * *
CTTTTTCGTTTGGGGGCAGAGGCTTCGTGCCAGAAAGGGGAACGTGTCCT L F R L G A E A S C Q K G E R V L>
1510 1520 1530 1540 1550
* * * * *
GCTTACCCAGTACCTGGGGCACTCCAGCCCCAAATGCCTCCCCCCTACTC L T Q Y L G H S S P K C L P P T >
1560 1570 1580 1590 1600
* * * * *
TTCATCTCGTCTGTACCCAGTTCTCTCTCTACCTAGTGGACGAGCGCCTT L H L V C T Q F S L Y L V D E R L> 1610 1620 1630 1640 1650
* * * * *
CCCCTGGTGCCGATGCTGAAGTGGAACCATGGCCTCCCCTCCCCGCTCCT P L V P M L K W N H G L P S P L L>
1660 1670 1680 1690 1700
* * * * *
GCTGGCCCGACTGCTGCCTCCGCCCCGGCCCAGCTGCGTGCAGCCCCTGC L A R L L P P P P S C V Q P L >
1710 1720 1730 1740 1750
* * * * *
TCCTCGGAGGCCAGGGTGGGCAGCTGCAGCTGCTGCACCTGGCAGGAGAA L L G G Q G G Q L Q L L H L A G E>
1760 1770 1780 1790 1800
* * * * *
GGGGCGTCGGTGCCCCGCCTGGCAGGCCCCCCCCAGTCTCTTCCTTCCAG G A S V P R A G P P Q S L P S T >
1810 1820 1830 1840 1850
* * * * *
GATCGACTCCCTCCCTGCATTTCCTCTGCTGGAGCCTAAGATCCAGTGGC I D S L P A F P L L E P K I Q W >
1860 1870 1880 1890 1900
* * * * *
GGCTGCAGGAGCGCCTGAAAGCACCGACCATAGGTCTGGCTGCCGTCGTC R L Q E R L K A P T I G L A A V V>
1910 1920 1930 1940 1950
* * * * *
CCGCCCTTGCCCTCAGCGCCCACACCAGGCCTGGTGCTCTTCCAGCTCTC P P L P S A P T P G L V L F Q L S>
1960 1970 1980 1990 2000
* * * * *
GGCGGCGGGAGATGTCTTCTACCAGCAGCTCCGCCCCCAGGTGGACTCCA A A G D V F Y Q Q L R P Q V D S >
2010 2020 2030 2040 2050
* * * * *
GCCTCCGCAGAGATGCTGGGCCTCCTGGCGACACCCAACCTGACTGCCAT S L R R D A G P P G D T Q P D C H>
2060 2070 2080 2090 2100
* * * * *
GCCCCCACAGCTTCCTGGACCTCCCAGGACACTGCCGGCTGCAGCCAGTG A P T A S W T S Q D T A G C S Q W>
2110 2120 2130 2140 2150
* * * * *
GCTGAAGGCCCTGCTAAAAGTGCCCCTGGCTCCTCCTGTGTGGACAGCAC L K A L L K V P L A P P V W T A > 2160 2170 2180 2190 2200
* * * * *
CCACCTTCACCCACCGCCAGATGCTGGGCAGCACAGAGCTGCGGAGGGAG P T F T H R Q M L G S T E L R R E>
2210 2220 2230 2240 2250
* * * * *
GAAGAGGAAGGGCAGCGGCTGGGTGTGCTCCGCAAGGCCATGGCCCGAGG E E E G Q R L G V R K A M A R G >
2260 2270 2280 2290 2300
* * * * *
GCAGCTCCTGCTGCAGAGAGACCTGGGCTCCCTCCCTGCGGCAGAGCCAC Q L L L Q R D L G S L P A A E P >
2310 2320 2330 2340 2350
* * * * *
CCCCTGCACCCGAGTCAGGCCTAGAGGACAAGCTCAGTGAGCGCCTGGGG P P A P E S G L E D K L S E R L G>
2360 2370 2380 2390 2400
* * * * *
GAAGCCTGGGCAGGCCGAGGGGCTGCCTGGTGGGAGAGGCAGCAGGGCAG E A W A G R G A A W W E R Q Q G R>
2410 2420 2430 2440 2450
* * * * *
GACCTCGGAGCCCGGGAGACAGACCAGGCGGCCCAAGCGCCGGACCCAGC T S E P G R Q T R R P K R R T Q >
2460 2470 2480 2490 2500
* * * * *
TGTCCAGCAGCTTTTCGCTCAGTGGCCATGTGGATCCGTCAGAGGACACC L S S S F S L S G H V D P S E D T>
2510 2520 2530 2540 2550
* * * * *
AGCTCCCCTCATAGCCCTGAGTGGCCACCTGCTGATGCTCTGCCCCTGCC S S P H S P E W P P A D A L P L P>
2560 2570 2580 2590 2600
* * * * *
CCCCACGACCCCGCCCTCCCAGGAGTTGACTCCGGATGCATGCGCCCAGG P T T P P S Q E L T P D A C A Q >
2610 2620 2630 2640 2650
* * * * *
GCGTCCCATCAGAGCAGCGGCAGATGCTCCGTGACTACATGGCCAAGCTA G V P S E Q R Q M L R D Y M A K L>
2660 2670 2680 2690 2700
* * * * *
CCACCCCAGAGGGACACCCCAGGCTGTGCCACCACACCTCCCCACTCCCA P P Q R D T P G C A T T P P H S Q> 2710 2720 2730 2740 2750
* * * * *
GGCCTCCAGCGTCCGGGCCACTCGCTCCCAGCAGCACACACCCGTCCTCT A S S V R A T R S Q Q H T P V L >
2760 2770 2780 2790 2800
* * * * *
CTAGCTCTCAGCCCCTCCGGAAGAAGCCTCGAATGGGCTTCTGAGGACAC S S S Q P L R K K P R M G F >
2810 2820 2830 2840 2850
* * * * *
AAGGTGGGCTGCCCTCAAGCCCCAGAGAGCCCCTCATCCTTCCTCTGGGA
2860 2870 2880 2890 2900
* * * * *
CCAGATGTGCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTT
2910 2920 2930 2940 2950
* * * * *
CTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTGAAGG
2960 2970 2980 2990 3000
* * * * *
GACAGGGCAACAAAATACAGTAGTAGTTTCTTTTGTATTTTGTATATTCG
3010 3020 3030 3040 3050
* * * * *
CCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTGCCGGTGGGCCTGTGTT
3060 3070 3080 3090 3100
* * * * *
GCTGGGATTTTAGTCTGTGCTGGGAGGCAGGGCTCCGTGCGCCTCAGCTG
3110 3120 3130 3140 3150
* * * * *
TGGGGGCCTCAGGCAGGTCCCTCAGTTCTCACGCCTTCCTGTCCAGTGGA
3160 3170 3180 3190 3200
* * * * *
ATGGGGGCCAGGAGTGCTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGG
3210 3220 3230 3240 3250
* * * * *
CCCCTGCAGAGCTGCTGATGAGGTGGGCACAGCGGCCGTTGGCAGCTGCT
3260 3270 3280 3290 3300
* * * * *
GTTGTGGGTTGCTTTGTCAATCTCTGCCCCGGTCTGATGTTTCCTACAGG
3310 3320 3330 3340 3350
* * * * *
GAGATGCCGTGGATCCAGGTTCAGGGACTAAATACACTTGGCAGCTGAAG 3360 3370 3380 3390 3400 * * * * *
ATGAATTGGAATGGTCACGTTTTTTAGGCTGGNACAGCGTCCCGCCACAG
3410 3420 3430 3440 3450
* * * * *
CTACTACCTGACACTGAGCTCATGCAGAGAGATGATGGCTGATGTTCCTT
3460 3470 3480 3490 3500
* * * * *
CTCCCTTGGGACATGGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCT
3510 3520 3530 3540 3550
* * * * *
GAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTGCCT
3560 3570 3580 3590 3600
* * * * *
CAGAGACTCCCCCCTTTCTTTCCTCCCTCCCCTTCTCATTTTGATGTCTA
3610 3620 3630 3640 3650
* * * * *
AAGCATCAAGTCCCTCTTCCTCAGAGTTTCTCTAGCTGCAGTGGAAGATT
3660 3670 3680 3690 3700
* * * * *
CTGTTTTCCTGTGGGGAAAATGCTCACTTGAGATTTTGCAGGGACCCGGG
3710 3720 3730 3740 3750
* * * * *
TCTGTCTGGTTTCTGATGACATAGTAAGAGAAAGGTCTTTTTTCAGGTTG
3760 3770 3780 3790 3800
* * * * *
GCTGGTGAAAGGAATTGCATGTGACTCACACAAACAGGAGCTAGCCCAAT
3810 3820 3830 3840 3850
* * * * *
CATACACTGACTCGCGTGGGTGTTTAAATGTTTATCATGCCTAAGGGAGA
3860 3870 3880 3890 3900
* * * * *
CATTTATAATTAAACCATTTATGCTACATAAAAAAAAAAAAAAAAAAAAA AA
3360 3370 3380 3390 3400 * * * * *
ATGAATTGGAATGGTCACGTTTTTTAGGCTGGNACAGCGTCCCGCCACAG
3410 3420 3430 3440 3450
* * * * *
CTACTACCTGACACTGAGCTCATGCAGAGAGATGATGGCTGATGTTCCTT
3460 3470 3480 3490 3500
* * * * *
CTCCCTTGGGACATGGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCT
3510 3520 3530 3540 3550
* * * * *
GAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTGCCT
3560 3570 3580 3590 3600
* * * * *
CAGAGACTCCCCCCTTTCTTTCCTCCCTCCCCTTCTCATTTTGATGTCTA
3610 3620 3630 3640 3650
* * * * *
AAGCATCAAGTCCCTCTTCCTCAGAGTTTCTCTAGCTGCAGTGGAAGATT
3660 3670 3680 3690 3700
* * * * *
CTGTTTTCCTGTGGGGAAAATGCTCACTTGAGATTTTGCAGGGACCCGGG
3710 3720 3730 3740 3750
* * * * *
TCTGTCTGGTTTCTGATGACATAGTAAGAGAAAGGTCTTTTTTCAGGTTG
3760 3770 3780 3790 3800
* * * * *
GCTGGTGAAAGGAATTGCATGTGACTCACACAAACAGGAGCTAGCCCAAT
3810 3820 3830 3840 3850
* * * * *
CATACACTGACTCGCGTGGGTGTTTAAATGTTTATCATGCCTAAGGGAGA
3860 3870 3880 3890 3900
* * * * *
CATTTATAATTAAACCATTTATGCTACATAAAAAAAAAAAAAAAAAAAAA AA

Claims

WHAT IS CLAIMED IS:
1. A composition comprising a substantially pure, biologically active portion of a TAF, wherein said TAF is other than CCG 1.
2. A composition according to claim 1 wherein said portion is a substantially full-length TAF.
3. A composition according to claim 1 wherein said TAF is selected from the group consisting of dTAF250. dTAFIII50, dTAFIII 10, dTAFII80, dTAFII60, dTAFII40 and dTAFII30.
4. A composition according to claim 1 wherein said TAF is selected from the group consisting of hTAFH250. hTAFIII50, hTAFII I30, hTAFII100, hTAFII70, hTAFII40 and hTAFII30.
5. A composition according to claim 1 wherein said TAF is selected from the group consisting of hTAFI l 10. hTAFI63 and hTAFI48.
6. A composition according to claim 1 wherein said TAF is selected from the group consisting of hTAFIII I72, and hTAFIII25.
7. A composition comprising an isolated nucleic acid sequence encoding a portion of a TAF according to claim 1.
8. A composition according to claim 7 wherein said portion is a substantially full-length TAF.
9. A composition according to claim 7 wherein said TAF is selected from the group consisting of dTAF250. dTTlII I50, dTAFIII10, dTAFII80, dTAFII60, dTAFII40 and dTAFII30.
10. A composition according to claim 7 wherein said TAF is selected from the group consisting of hTAFII250. hTAFII150, hTAFII I30, hTAFII100, hTAFII70, hTAFII40 and hTAFII30.
11. A composition according to claim 7 wherein said TAF is selected from the group consisting of hTAF II 10, hTAFI63 and hTAFI48.
12. A composition according to claim 7 wherein said TAF is selected from the group consisting of hTAFIII I72, and hTAFIII25.
13. An antibody that specifically binds a composition according to Claim 1.
14. A vector comprising a nucleic acid sequence according to claim 7 operably linked to a transcription regulatory element.
15. A cell comprising a nucleic acid sequence according to claim 7.
16. A process for the production of a TAF comprising culturing the cell of Claim 15 under conditions suitable for the expression of said TAF and recovering said TAF.
17. A composition comprising a recombinantly produced TAF.
18. A method of identifying an agent useful in the diagnosis or treatment of disease associated with transcription, said method comprising the steps of:
contacting an agent with at least a portion of a TAF according to claim 1; and,
determining whether said agent specifically binds said TAF.
19. A method of identifying an agent useful in the diagnosis or treatment of disease associated with transcription, said method comprising the steps of:
adding an agent to a mixture comprising at least a portion of a TAF according to claim 1 : comparing the as.sociation of mixture components before and after said adding step;
identifying an agent that alters the association of mixture components.
20. A method for treating disease, said method comprising:
identifying an agent according to the method of claim 18; and, contacting an individual with said agent;
wherein said agent modulates transcription in said individual.
21. A method for treating disease, said method comprising:
identifying an agent according to the method of claim 19; and, contacting an individual with said agent;
wherein said agent modulates transcription in said individual.
PCT/US1994/001114 1993-01-28 1994-01-28 Tata-binding protein associated factors, nucleic acids encoding tafs, and methods of use WO1994017087A1 (en)

Priority Applications (3)

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EP94907933A EP0681585A4 (en) 1993-01-28 1994-01-28 Tata-binding protein associated factors, nucleic acids encoding tafs, and methods of use.
JP6517394A JPH08509119A (en) 1993-01-28 1994-01-28 TATA binding protein-related factor, nucleic acid encoding TAF and method of use
AU61311/94A AU682340B2 (en) 1993-01-28 1994-01-28 TATA-binding protein associated factors, nucleic acids encoding TAFs, and methods of use

Applications Claiming Priority (4)

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US1341293A 1993-01-28 1993-01-28
US08/013,412 1993-01-28
US8711993A 1993-06-30 1993-06-30
US08/087,119 1993-06-30

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US5871902A (en) * 1994-12-09 1999-02-16 The Gene Pool, Inc. Sequence-specific detection of nucleic acid hybrids using a DNA-binding molecule or assembly capable of discriminating perfect hybrids from non-perfect hybrids
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WO1999033985A2 (en) * 1997-12-30 1999-07-08 Chiron Corporation C1F150/hTAFII150 IS NECESSARY FOR CELL CYCLE PROGRESSION
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US8114962B2 (en) 1994-12-09 2012-02-14 The Gene Pool, Inc. Method of detection of nucleic acids with a specific sequence composition
US5871902A (en) * 1994-12-09 1999-02-16 The Gene Pool, Inc. Sequence-specific detection of nucleic acid hybrids using a DNA-binding molecule or assembly capable of discriminating perfect hybrids from non-perfect hybrids
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WO1998004704A1 (en) * 1996-07-29 1998-02-05 Whitehead Institute For Biomedical Research Tbp-associated global negative regulator and methods of use thereof
WO1999013338A1 (en) * 1997-09-12 1999-03-18 Genelabs Technologies, Inc. dsRNA/dsRNA-BINDING PROTEIN METHODS AND COMPOSITIONS
WO1999033985A2 (en) * 1997-12-30 1999-07-08 Chiron Corporation C1F150/hTAFII150 IS NECESSARY FOR CELL CYCLE PROGRESSION
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WO2000012699A1 (en) * 1998-08-27 2000-03-09 Yeda Research And Development Co. Ltd. A transcription factor tfiid subunit, tafii105, polypeptides, dna encoding therefor and pharmaceutical compositions
US6174679B1 (en) 1998-12-10 2001-01-16 Chiron Corporation CIF150/hTAFII150 is necessary for cell cycle progression
WO2001066752A2 (en) * 2000-03-07 2001-09-13 Whitehead Institute For Biomedical Research Reproduction-specific genes
WO2001066752A3 (en) * 2000-03-07 2002-07-11 Whitehead Biomedical Inst Reproduction-specific genes
WO2001085940A2 (en) * 2000-05-05 2001-11-15 Institut National De La Sante Et De La Recherche Medicale (Inserm) USE OF hTAFII80 AND ISOFORMS THEREOF FOR INDUCING APOPTOSIS
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AU682340B2 (en) 1997-10-02
AU6131194A (en) 1994-08-15
EP0681585A4 (en) 1998-09-30
EP0681585A1 (en) 1995-11-15
CA2154882A1 (en) 1994-08-04
US5534410A (en) 1996-07-09
JPH08509119A (en) 1996-10-01

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