WO1987007277A1 - Fc receptor for immunoglobulin - Google Patents
Fc receptor for immunoglobulin Download PDFInfo
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- WO1987007277A1 WO1987007277A1 PCT/AU1987/000159 AU8700159W WO8707277A1 WO 1987007277 A1 WO1987007277 A1 WO 1987007277A1 AU 8700159 W AU8700159 W AU 8700159W WO 8707277 A1 WO8707277 A1 WO 8707277A1
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- receptor
- immunogobulin
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
- C07K14/435—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
- C07K14/705—Receptors; Cell surface antigens; Cell surface determinants
- C07K14/70503—Immunoglobulin superfamily
- C07K14/70535—Fc-receptors, e.g. CD16, CD32, CD64 (CD2314/705F)
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P37/00—Drugs for immunological or allergic disorders
Definitions
- this invention relates to cDNA clones encoding the murine and human Fc receptor for IgG.
- the murine clones mere sequenced and expression of mRNA and the cel l surf ace Fc receptor investigated.
- the murine Fc receptor is a 301 amino acid transmembrane glycoprotein with t ⁇ o homo l ogous extrace l lu l ar domains that are a l so homo l ogous to members of the Ig superf ami l y.
- the Fc receptor has 4 sites of N linked glycosylation and a long 94 amino acid cytoplasmic tail.
- the present invention provides a receptor for the Fc portion of immunogobulin and being derived from ATCC ,
- the present invention provides a receptor for the Fc portion of immunogobulin, the receptor exhibiting the abi l ity to bind to the Fc portion of mouse and human immunogobulin.
- the receptor preferably exhibits an ability to bind to antibodies and immune complexes, has a size of 40-70 kilodaltons, is formed from mRNA of a size of about 1.8, about 2.0, about 1.9, about 1.4 or about 2.4 kilobases, and includes tuio substantially regularly spaced pairs of Cys residues, tuio or four potential N-linked glycosylation sites.
- the present invention includes a receptor f or the Fc portion of immunogobulin and having at least 40 %, more preferably at least 50% and stil more preferably atleast 60% homology with the above receptor.
- the receptor includes the amino acid In one instance the receptor includes the amino acid sequences:-
- the receptor includes at least one of the amino acid sequences:-
- the present invention also provides a nucleotide sequence, gene, cDNA clone, or a vector for same adapted to encode or to produce a material adapted to encode for the receptor above or a fragment thereof.
- the present invention also provides a nucleotide sequence, gene, cDNA clone, or a vector for same adapted to encode or produce a material adapted to encode for the leader sequence, extracellular region, transmembrane region or intracellular region of the receptor above.
- the present invention also provides a cDNA clone, gene or nucleotide sequence being incorporated in ATCC ,ATCC or ATCC and capable of encoding for a receptor for the Fc portion of immunogobulin or a fragment thereof and a material being ATCC ,ATCC , or ATCC
- a preferred nucleotide sequence, cDNA clone, gene or vector containing same and capable of encoding for a receptor for the Fc portion of immunogobulin includes the nucleotide sequences:-
- nucleotide sequence, cDNA clone, gene or vector containing same includes at least one of the nucleotide sequencess:-
- CAG TGG TTC CAC AAT GGG AGG TCC ATC CGG AGC CAG GTC CAA GCC AGC TAC ACG TTT AAG GCC ACA GTC AAT GAC AGT GGA GAA TAT CGG TGT.
- GAT CAC AGG GAA ATG GGA GAA ACC CTT CCA GAG GAA GTA GGT GAG TAC AGA CAG CCC TCT GGG GGC TCA GTG CCT GTC AGC CCA GGG CCT CCA TCT GGA CTG GAG CCA ACA AGC AGC CCA TAC AAT CCT CCT GAT CTG.
- FcR Fc receptors form a major groups of cell membrane glycoproteins involved in homeostasis of the immunological system.
- Specific receptors for all immunoglobulin (Ig) classes have been defined and are found on a wids variety of immune cells - B cells and some T cells as well as myeloid cells and non - haemopoietic cells (Hubscher et al, 1971 ; Dickler, 1976; Tsay et al, 1980; Unkless et al, 1981 ).
- the principal role of these receptors is to bind (Ig) via the Fc region of the Ig molecule and it is through this interaction that a wide range of biological effects are mediated.
- J774 macrophage cells (2x10 10 ) were harvested from ascites fluid obtained from (CBAxB ALB /c)F1 mice and immediately lysed in cold phosphate buffered saline (PBS) / 0.5% Nonidet P-40 (PBS/0.5% NP40) pH 7.4 containing 1 % aprotinin (Sigma, St. Louis, M0) and 1mM phenylmethylsulfonyl fluoride (Sigma, St. Louis, M0). An additional 2x10 7 cells were surface labeled with 125 I , and pooled with the cold lysate.
- the immunoabsorbent was packed into a column and the bound material eluted with 0.5% sodium dodecyl sulfate (NaDodSO 4 ) in 0.1M triethylamine pH 11.5 and freeze dried.
- NaDodSO 4 sodium dodecyl sulfate
- the purity of the Fc gamma R preparations was assessed by NaDodS0 4 /polyacrylamide gel electrophoresis ( NaDod SO 4 /P AG E) and proteins were detected by Coomassie blue staining or by autoradiography.
- Protein Sequence Analysis Protein samples were carboxamidomethylated and ethanol precipitated prior to sequencin g.
- samp l es were dissol v ed in 50mM boric acid , 0.1 % (w/v ) SDS and 10mM dithiothreitol pH 8.0 (NaOH) and heated to 60°C f or 1 hour. Iodoacetamide was added to a final concentration of 22mM and the samples incubated for 15 minutes at ambient temperature in the dark. Ice cold ethanol containing 50mM HCl was added and the protein al lowed to precipitate at -20°C for 2 hours.
- the precipitate was co l lected by centrifugation , disso l v ed in C F 3 COOH and sequenced by automatic Edman degradation using an Applied Biosystems 470A Sequencer (Foster City, CA., USA) Sequencing and phenylthiohy dant oin amino acid identification techniques have previously been described in detail
- FcgammaR peptides were obtained by digesting samp les of affinity purif ied, carboxamidome thylated Fc gamma R with either S. aureus V8 protease (Miles Laboratories) (Hibbs et al 1986 ) lysine-C proteinase (according to manuf acturers ins tructions , Boehringer Mannheim, Mannheim, FRG) or cyanogen bromide ( C N B r ) .
- the proteinase digested material was applied to a Pep RPC HR5/5 (C2/C18) reverse phase column (Pharmacia) whi le a Pro RPC HR 5/10 (C1 /C8) rev erse phase co l umn ( P h a rmac ia ) wa s u s e d t o p urif y CN B r p ep tid e s .
- Peptides were eluted with ascending linear acetonitrile gradients using 20mM ammonium f ormate as a buff er and an absorbance trace at 214nm to detect peptide peaks.
- the oligonucleotide probes were purified from crude mixtures by reverse phase HPLC and were radiolabeled with [ gamma 32 P] ATP and T4 po lynucleotide kinase to 2x10 8 dpm/ug (Maniatis et al 1982).
- Library Screening The cDNA library used in the murine study was kindly provided by Drs N. Gough and A. Dunn (Ludwig Institute for Cancer Research, Melbourne, Australia) and was constructed using poly A + mRNA from the FcR + myelomonocytic cell line WEHI 3B (Gough et al, 1985).
- the cDNA was GC tailed into the SacI site of the pJL3 vector, ⁇ ith the result that all cDNA inserts are flanked by EcoRI sites. Oligodeoxynucleotide probes (Tables 2,3) were constructed using the phosphoramidite method (Winnaker and Dorper, 1982) and were complementary to mRNA for use in Northern analysis. The cDNA library was screened with end labeled oligonucleotide probes using T4 polynuc. leotide kinase to >10 9 dpm/ug DNA. Hybridisation and washing conditions were as previously described (Hibbs et al., 1986).
- PolyA + mRNA (5ug of polyA + or variable amounts of total mRNA) was denatured and electrophoresed in 1% agarose gels formaldehyde, transferred to nylon membrane and hybridised overnight (Maniatis et al, 1982).
- Hybridisations with the cDNA probe were performed in 5xSSPE, 0.1% SDS, 50% formamide, 0.125% skim milk powder and 1ug/ml degraded DNA, at 42°C for 16 hrs. The filters were then washed twice in 1xSSPE at room temperature, then twice in 0.2xSSPE at 50°C for 16 hrs.
- Hybridisations with the oligodeoxynucleotide probe were performed in 5xSSPE, 6% SDS, 10x Denhardts and 1ug/ml degraded salmon sperm DNA at 42oC. Filters were washed twice in 2xSSPE at room temperature then twice in 1xSSPE at 42°C.
- the cDNA probe was labelled by n i c k t r a n s l a t i o n a n d u n i n c o r p o r a t e d l a b e l r e m o v e d o n a spinning sepharose G50 column (Maniatis et al, 1982).
- the oligodeoxynucleotide probe was end labelled with 32 P- ATP for 1 hour at 37oC using T4 polynucleotide kinase then added directly to the hybridisation mix (Maniatis et al, 1982).
- DNA was prepared from C57BL/6 mouse spleen, human thymus and peripheral blood (Maniatis et al, 1982); 20ug of DNA digested with appropriate restriction e n z ym e ac c ord in g t o t h e m a nu f ac tu r er ' s in st r uc t io n s (Pharmacia , Uppsa l a, Sweden) was electrophoresed in a 0.5% agarose gel , transferred to a nylon membrane and hybridised in 5xSSC, 0.1 % SDS, 50% formamide, 20mM phosphate buffer pH 6.8 and 0.125% skim mil k powder ov ernight with randomly primed or nick translated cDNA at 55°C.
- Filters containing pFc24 or pFc113 were probed as described (Hibbs et al , 1986). Filters containing HFc3.1 HFc3.0 or HFc3.47 were probed with nick trans l ated cDNA or end l abel l ed oligonucleotides by hybridisation at 35° in 20% formamide, 5xSSC , 0.1 % SDS , 0.125% skim milk powder f or 16 hours , then washed in 1 xSSC at 35°C. Detection of FcR by EA rosetting : Sheep erythrocytes were washed f our times in norma l sa line.
- Packed cel l s (50ul) were added to 4ml of trinitrobenzene sulphonate (12.5 mg /m l i n ph o sp hat e b u f f e red sa l ine (P BS ) ) a n d th e pH adjusted to pH 7.2.
- the mixture was incubated at room temperature for 20' then washed three times.
- the cel ls were resuspended in 20m l of anti-TNP antibody (K1 , IgG2b or A3IgG1 ; L op e z et a l .
- the cel l lines used in this study were the BALB/c macrophage tumour J774, BALB/c myel omonocytic cel l line WEHI 3B , and the AKR thym ⁇ ma K36.
- Cel l line were maintained in vitro in Dulbecco's modified Eagle's medium or RPMI 1640 both supplemented with 10% fetal calf serum.
- Serological Detection of Ly-17 (FcR) expression Cell lines were tested for FcR expression using a monoclonal anti-Ly17.2 antibody and rosetting with sheep anti-mouse Ig coated erythrocytes (Hibbs et al., 1985; Parish and McKenzie, 1978 ) .
- DNA sequencing The cDNA inserts of pFc24, pFc113 were seque ⁇ ced by either chemical cleavage described by Maxam and Gilbert (1980) or Sanger di-deoxy sequencing (Sanger et al., 1977) after subcl oning into M13mp8 , M13mp9, or M13mp18 according to the sequencing strategy outlined in Fig. 3A.
- the cDNA inserts of the human FcR clones were also sequenced by the dideoxy nucleotide method after subcloning fragments into M13 vectors.
- This poo l consisted of three unique probes which co rre sponded to nuc l eotides 1 37- 185 in the mous e ( Nterminus), nucleotides 545-574 (second extracel lular domain) and nucleotide 956-1000 (C-terminus).
- se v era l c l ones HFc3.1 , 3.0 , 3.47) wh ich hybridised with both the murine cDNA and o l igonucleotide probe pool were isolated and further characterised. Phage DNA was prepared from these.
- FIGURE LEGENDS Figure 1 One dimensional Na Dod S 04 / PAGE analysis of the IgG FcR of J774 macrophage cells. Sizes are given in kDa.
- A Immunoprecipitation of Fc gamma R from surface iodinated J774 cells. Immunoprecipitations were performed with anti-Ly-2.1 F(ab')2 (Lane 1) or with anti-Ly-17.2 F(ab')2 (Lane 2).
- Lanes 1-6 represent successive fractions of eluted material from the affinity column (C). Autoradiogram of NaDodSO4/PAGE of affinity purified 125I-1abelled FcR. Lanes 1-6 are as for B, above.
- Figure 2. Southern blot analysis of pFc24 and pJL3. One microgram of pFc24 (lanes B,D,F) or pJL3 (lanes A,C,E) was digested with EcoRI and electrophoresed in 1% agarose gsl.
- Nucl eotides are numbere d a t the end of t h e l ine a nd the 5 ' an d 3 ' untrans lated regions are show ⁇ in cl osed up type.
- the signa l sequence is numbered from residue -29 to -1 and the transmembrane region (Tm) is underlined by a broken line.
- sequences underlined with a so lid line correspond to sequences identical to the amino terminal sequence (NH2) and to amino acid sequence of peptides (L9 , V17 , 2V16 , 2V8 , CNBR, L5, L3, L4, V10, V11 ) isolated from the immunopurified FcR (Hibbs et al., 1986). Other notation is as fo l lows: o, first Cys in each domain; 0 second Cys in each domain; Nlinked glycosylation sites.
- the nucleotide sequence of pFc24 is embodied within the cDNA insert of pFc113 from nucleotides 61 to 1023.
- FIG. 4 Amin o acid s equen c e c omp ariso n of Fc(gamma)R domains (amino acids 5-116 for domain 1 and amino acids 118-175 for domain 2) to each other and to Ig related molecules. Identical residues are boxed and a "-" indicates a break in sequence f or alignment purposes.
- A The FcR domains were aligned with each other to give the optimal score using the ALIGN program with a matrix bias of +6 and brsak penalty of 6 (see text).
- Amino acids common to FcR domains and other sequences are boxed ; V 2 , M OPC 104E (Apella, 1977); Vk, MOPC 149 (Nishioka and Leder, 1980); T4, L3T4 (Classon et al , 1986; Tourvieil le et al , 1986; G. Clark, N. Deacon Personal Communication); N-CAM, Neural Cell Adhesion Molecule (Hemperly et al, 1986); Poly IgR, Poly Ig Receptor (Rostov et al , 1984).
- FIG. 1 (B) Northern blot of poly A+ RNA from FcR+ cel l lines, WEHI 3B (a); J774 macrophage cells (b); K36 T lymphoma (c); and FcR- cells F4N (d), probed with an oligodeoxynucleotide corresponding to nucleotides 542-674 in pFc113. The position of 28S and 18S rRNA is indicated.
- Figure 6 Southern analysis of the FcR gene. Spleen DNA from C57BL/6 mice was digestsd with (a) Hindlll, (b) EcoRI or (c) PstI and probed with tha 840bp BamHI-EcoRI f ragment of pFc24 (see Legend Fig.
- Figure 8 Nucleotide and predicted amino acid sequence of the human FcR encoded by HFc3.1 Nucleotides are numbered every decade and the translated sequence is found above the nucleotide sequence. Amino acids are numbered above the line and number 1 indicates the N-terminal residue. The incomplete signal sequence is underlined by a broken line to residue -1. The two glycosylation sites are marked by stars and the single hydrophobic transmembrane region is underlined by a solid line. Cysteine residues involved in disulphide bonding are circled. The "intronlike" sequence is located between the vertical arrows.
- Figure 9 Homology of the human FcR encoded by HFc3.1 cDNA with the mouse alpha and betal Fc(gamma)R.
- Figure 10 Partial nucleotide sequence and predicted amino acid sequence for HFc3.47 cDNA derived from two nonoverlapping HFc3.47 fragments and identification of homologous regions in the beta (1 or 2) FcR of the mouse.
- the HFc3.47 nucleotide and amino acid sequences are shown as the upper sequences in A and the lower sequences in B. Diamonds indicate nucleotide identities where as asterisks indicate amino acid identities. An "X" in the sequence indicates an unknown residue.
- Figure 11 Nucleotide and predicted amino acid sequence of the human FcR encoded by HFc3.0. Nucleotides are numbered every decade and the translated sequence is f ound abov e the nuc l eotide sequence.
- Amino acids are numbered above the line and number 1 indicates the Nterminal residue.
- the incomplete signal sequence is underlined by a broken line to residue -1.
- the two glycosylation sites are marked by stars and the single hydrophobic transmembrane region is underlined by a solid line. Cysteine residues involved in disulphide bonding are circled.
- Figure 12 Homology of the human FcR encoded by HFc3.0 cDNA with the mouse alpha and betal FcR. Alignment of the nucleotides of the human FcR with both mouse alpha (A) and betal (B) FcR.
- Amino acid residues common to the human FcR encoded by HFc3.0 and the alpha FcR (A) or beta 1 (B) are shown by asteriks.
- the human (HFc3.0) mouse alpha or beta FcR leader sequence, extracel lular domain, transmembrane domain and cytoplasmic domains are indicated by the sequences between the vertical arrows.
- the cysteine (C) residues within the extracellular domains are identified by the solid circles.
- Figure 13 Northern blot analysis of total RNA isolated from normal human spleen and probed with the cDNA insert from HFc3.1. The 28s and 18s ribosomal RNAs are indicated.
- FIG. 14 Southern blot analysis of the human FcR gene.
- Human thymus DNA (A) and human peripheral leukocyte DNA (B) was digested with 1 , Hind III; 2, PvuII; 3, EcoRI and 4, PstI and probed with the cDNA insert from HFc3.1. Molecular size markers (Hindlll digested RNA) are indicated.
- Isolation of full length cDNA clone The Fc(gamma)R has been purified to homogeneity using the anti-Ly-17.2 antibody (Fig. 1). Protein and peptide sequencing studies have enable one third of the molecule to be sequenced (Table 1).
- Consensus oligodeoxynucleotide probes constructed from the protein sequence were used to isolate a cDNA clone (pFc24). Southern analysis established that the cDNA insert of pFc24 reacted with the probes (Fig. 2). MaxamGilbert sequencing of the 5' and 3' ends of pFc24 (Fig. 3A,B) indicated it that it was not full length since no entire leader sequence or inframe termination codon was apparent at the 5' and 3' ends respectively. A full length cDNA clone, pFc113 (Fig.
- pFc113 was isolated by reprobing the WEEHI 3B library with oligodeoxynucleotide probes constructed from the nucleotide sequence of the 5' and 3' ends . of pFc24. These probes corresponded to nucleotides 140-187 (probe 1.5) or 959-1000 (probe 1.6) (Fig. 3B, Table 3) and only clones to which both probes hybridised were subsequently Isolated.
- the cDNA insert of pFc113 contains approximately 2.0 kilobase pairs whereas that of pFc24 has only 962bp but is entirely embodied in pFc113 between nucleotides 61 and 1023.
- Nucleotide and amino acid sequence The amino acid sequence predicted from the nucleotide sequence of pFc113 (Fig. 38) indicates that mature FcR is a membrane molecule composed of 301 amino acids and is synthesised with a 29 amino acid leader sequence.
- the amino acid sequences of 10 of 11 peptides we had previously sequenced from immunopurif ied FcR were found encoded by pFc113 cDNA (Fig. 3B, Hibbs et al, 1986). Miscalling of several amino acid residues during sequencing of the peptides accounts for the differences between the sequence of peptides L5 and CNBR and the predicted sequence of these regions from the cDNA clone.
- CNBR peptide is preceded by a Trp not the predicted Met but it is known that CNBR will cleave on the C terminal side of Trp residues in acid solutions (Ozols et al, 1977).
- Trp the predicted Met
- CNBR will cleave on the C terminal side of Trp residues in acid solutions.
- Several other important observations can be made from the predicted amino acid sequence. Firstly, a single transmembrane region of 28 amino acids exte ⁇ ds from Leu180 to the sequence L y s 209 - L y s 210 - L y s 211 and separates the 94 amino acid long cytoplasmic region from the 179 extracellular amino acids.
- the extracellular portion of the FcR molecule contains two regularly spaced pairs of Cys residues, the first pair Cys 28 and Cys 70 separated from each other by 41 amino acids and the second pair Cys 109 and Cys 153 separated by 43 amino acids. This regular arrangement suggests the extracellular portion may be organised into two disulphide bonded domains (see homologies below). Thirdly, four potential N-linked glycosylation sites are present in the extracellular region of the receptor, with two glycosylation sites located within each of the putative domains.
- the score for the optimal alignment is then represented as the number of standard deviations by which the maximum score for the alignment of two sequences exceeds the score for a large number of alignments after randomization of the original sequences (Dayhoff et al, 1983).
- Arbitrary setting of the boundaries of these domains around the pairs of Cys residues showed that alignment of amino acids 5-86 (FcR, domain 1 ) with amino acids 88-175 (FcR, domain 2) gave 29% identical residues with an ALIGN score of 7.1 SO i.e. the probability of such an alignment occuring by chance is >10 8 and implies the tandem duplication of a single domain.
- Such repeated domain structures are evident in Ig and related molecules that comprise the Ig superfamily (Williams 1985).
- the sequences surrounding cysteine residues 70 and 153 were shown to be highly representative of the consensus sequence (Gly-X-TyrX-Cys) around the disul phide-bonded Cys residue in Ig V region domains.
- the sequences f lanking Cys residues 28 and 109 were indicative of the disulphide-bonded Cys near the amino-terminus of the V-region of Ig chains and other Ig related molecules.
- the Trp residue located 13 residues downstream from Cys 28 and a Phe residue 13 residues downstream from Cys 109 are commonly observed in thi s p osition of I g - l ik e s tru ctur e s.
- the nucleotide and predicted amino acid sequence of the betal form of the Fc(gamma)R therefore is that show ⁇ in Fig. 3B.
- another form of the Fc(gamma)R is highly homologous to the FcR described here -almost certainly being a splice variant.
- the splice site occurs in the region encoding the intracellular domain indicating that the betal and beta2 forms of the FcR have identical extracellular domains.
- a third form of the FcR has also been identified by cDNA cloning studies and designated the alpha FcR The mature alpha protein shows a little variation from the receptor described herein with approximately 7% variation in amino acid content of the ligand binding domains.
- Protein was purif ied b y a f f inity chroma togra ph y th en digested with proteolytic enzymes either before or after reduction of disulphide bonds with dithiothreitol. Digests were then fractionated by reversed-phase ch romat o gr a p hy .
- the betal Fc(gamma)R is the receptor for IgG1/2b, heterologous IgG and possibly other Ig since cells which express only the betal receptor only can bind IgG1/IgG2b as well as rabbit IgG coated erythrocytes (Table 4).
- K36 cells have the Ly-17.2+ and 2.4G2+ molecules which have been shown to be identical and are epitopes on the Fc(gamma)R molecule (Unkless, 1979; Hibbs et al, 1985; Holmes et al, 1985).
- antibodies to these molecules completely inhibit the binding of IgG1/2b and rabbit IgG complexes to the cell surfaces.
- the betal variant must code for molecules which have Fc binding ability and the epitopes detected by the 2.4G2 and Ly-17.2 antibodies. Both the Ly-17.2 and 2.4G2 epitopes are clearly present on the betal and beta2 molecules since both antibodies were used to purify these molecules for amino acid sequencing in this study.
- the pFc113 cDNA (in the pKC3 vector) described herein was transfected into FcR negative LTA-5 cells resulting in expression of FcR (Ly17.2) on the cell surface (Table 4) indicating that this clone encodes an immunoglobulin binding FcR.
- the N-terminus of the human Fc(gamma)R has been predicted on the basis of homology to the mouse alpha Fc(gamma)R N-terminal sequence.
- the region between the N-terminus and the first cysteine residue is the most highly conserved region between the two species, showing 71 and 73 percent amino acid homology with the murine betal and alpha Fc(gamma)R respectively (Fig. 9A, B).
- the extracellular region is divided into two disulphide-bonded domains: the first pair of cysteine residues being separated by 41 amino acids and the second pair by 43 amino acids.
- the human Fc(gamma)R has a transmembrane region of 28 amino acids extending f rom residue 219 to the hydrophilic stop transfer sequence Arg (245) - Lys (246) - Lys (247) - Arg (248) (Fig. 8).
- This transmembrane sequence is highly homologous to the mouse betal Fc(gamma)R (50 percent amino acid homology), but shows no homology to the transmembrane sequence of the mouse a l pha Fc( gamma)R receptor (Fig. 9A,B).
- An in frame termination codon is found at nucleotide 1040 yielding a 75 amino acid intracytoplasmic domain.
- Comparison of the cytop lasmic domains of both mouse Fc(gamma)Rs with the human Fc(gamma)R shows little idsntity of either nucleotides or amino acids (Fig. 9A,B).
- the human FcR sequence contained an additional 117 nucleotides which result in an insertion of 39 amino acids between the two extracellular domains (Fig. 8). This sequence is absent from mouse FcRs (Fig. 3B, 9A,B) and most likely represents an intron sequence. This is inferred from the sequencing of murine genomic clones.
- Partia l nucleotide sequence of HFc3.47 has a l so revealed homology with the mouse FcRs (Fig. 10). Two nonoverlapping fragments were sequenced and the first fragment (Fig. 10A) re vealed 80% nuc l eotide homo l ogy with the corresponding sequence in betal FcR (nucleotides 629-733). This sequence is present in beta2 and a similar sequence in alpha. The second fragment shared 72% nucleic acid homology with nucleotides 959-1015 of the beta 1 FcR, this sequence also being present in the beta2 FcR but not alpha FcR.
- HFc 3.0 sncodes a protein highly homologous to the mouse alpha and beta FcR receptors (Fig. 12A,B).
- the nucleotide sequence HFc 3.0 is identical to HFc 3.1 with the exception of a large segment (nucleotides 338- 455 in HFc 3.1) between the two disulphide bonded domains which has been deleted in HFc 3.0.
- the protein encoded by HFc 3.0 has an extracellular ligand binding region consisting of two disulphide bonded domains each with a site of attachment for N-linked carbohydrate.
- the encoded protein has a 28 amino acid transmembrane region and 75 amino acid cytoplasmic tail.
- the extracellular region shows an overall homology of 67% identical amino acid residues and the transmembrane region has 14 of 28 amino acid identities with the mouse betal and beta2 transmembrane region (Fig. 12A.B).
- Expression of Human FcR mRNA Northern blots were performed to analyse FcR expression in normal human spleen. Two mRNA transcripts were apparent after probing total mRNA from normal human spleen with the cDNA insert from pHFc 3.1 (Fig. 13).
- mouse FcR can bind mouse and human immunoglobulin and have many similarities with mouse FcR, (Dickler, 1976; Anderson and Abraham, 1980, Kulczycki et al, 1981 ; Perussia et al, 1983; Dorrington and Klein, 1983), it is likely that there is a high degree of structural and functional homology which conserved at the nucleic acid and amino acid levels.
- mouse cDNA pFc24 and a combination of oligonucleotides, probes 1.5, 1.6, 1.10 (Table 3) to screen a library constructed from mRNA isolated from human acute monocytic leukaemia cells THP-1. Several clones were isolated including HFc3.1, 3.0 and 3.47.
- the extracellular region (FCR) consists of 179 amino acids; their function is to act as the receptor for the Fc piece of Ig molecules. This binding site has not yet been identified but comments on the nature of the sequence are relevant. (a) The FcR is divided into two domains by cysteine residues, Domain 1: Cys 28 - Cys 70; Domain 2: Cys 109 - Cys 153. Both of these domains may have FcR activity as they are highly homologous.
- each domain all or most of the amino acids are likely to be involved in Ig binding as they are conserved - the two domains are conserved in man and mouse.
- domain 1 and domain 2 are very similar
- domain 1 of mouse each contain 43 amino acids, of these 24 are identical and in the identical position
- of the 19 differences 8 are conservative changes in that only 1 nucleotide has been changed, and of the remaining changes, 6 of the 19 are in the same amino acid group (see below) and 13 are in different groups.
- the whole sequence in the domain or minor variations thereof are most likely to be involved in Ig binding.
- amino acids substituted belong to the same groups and would therefore not substantially alter the tertiary structure of the molecule and the groupings of amino acid are : - (i) non-polar amino acids : A , V, L, I, P, F, M, W.
- Transmembrane Region This consists of 28 amino acids and extends from Leu 180 - Lys 209 in mouse betal FcR.
- the key feature of this is the hydrophobic nature of the sequence is required as this portion interacts with the hydrophobic cell membrane and anchors the molecule in the cell membrane. Because of the hydrophobic nature, it follows that minor alterations of sequence - substitution of one non-polar amino acid by another, would not alter the essential function of the transmembrane region.
- hydrophobic (non-polar) amino acids are alanine (A); valine (V); leucine (L); isoleucine (I); proline (P); phenylalanine (F); methionine (M) and tryptophan (W).
- Intracelluar Region The intracellular region is involved in signal transmission - obtained whe ⁇ the Fc of Ig binds to the FcR. The mode of signal transmission is unknown. A useful sequence of the FcR is described; it is likely that variations of this sequence, obtained by deletion of parts of the whole sequence, could also function in signal transmission. The region of the betal receptor that is spliced out in beta2 is important in cells expressing these molecules. Variants on the materials the subject of this specification are possible:- A. Sequence Variation The nucleotide sequences encoding the receptor can be variable:- 1. Because of the degeneracy of the genetic code nucleotide change does not necessarily bring about a change in the amino acid encoded, e.g.
- the codon GUU specifies a valine residue as do the codons GUC, GUA, GUG each being different by a single nucleotide.
- Two or three nucleotide changes can give rise to the same amino acid, e.g. codons UUA, UUG, CUU, CUC, CUA, CUG all encode Leucine. Codons AGU, UCC, UCU, UCA, UCG encode serine. 3.
- Changing one or two nucleotides may result in a conservative amino acid change unlikely to greatly affect the function of the protein, e.g. codon UUG specifies leucine and AUU specifies isoleucine.
- UGG specifies tryphophan and UUU specifies phenylalanine - all conservative changes.
- Allelic variations Variations in nucleotide sequence and amino acid sequences of the encoded protein as well as resultant may occur between individual members of the same species. These variations arise from changes in the nucleotide sequences encoding the protein. Thus different forms of the same gene (called alleles) give rise to protein of slightly different amino acid sequence but still have the same function. 5. Variation can occur as the result of differential mRNA splicing where one gene composed of many different segments (exons) of coding sequence - DNA encoding the mature protein - gives rise to a RNA that is spliced such that the portion of the RNA derived from certain exons are removed.
- exons is different in different cell types, e.g. the betal and beta2 forms of FcR or the alpha and alpha' forms of Ly-2.
- Proteins having the same function may arise from related genes. Many protein gene families have been described, e.g. immunoglobulins which have nucleotide and amino acid sequence variation but retain their primary function of antigen binding. Such homologous proteins are encoded by homologous genes. These genes arise by duplication of one original gene or by gene conversion. 7.
- Variation may be intentionally introduced by:- (a) Mutating cloned cDNA or genomic DNA by point mutation, rearrangement or insertion of related or unrelated DNA into the cDNA or genomic clones encoding the functional protein. Such mutated (variant) clones can be used to generate variant proteins or peptides which in the context of this specification may have Ig binding function. (b) By enzymatic cleavage of the protein (from sither in vitro synthesis or normal cell synthesised protein) with or without repair/rearrangement of the cleavage products. (c) By chemical modification. (d) By irradiation. B. Use of portions of the FcR protein.
- the present invention also includes the use of segments of the FcR protein (peptides) and variant peptides synthesised or genetically engineered that have the capacity to bind Ig.
- the FcR protein and its variants extend from the first methionine in the leader sequence to the most C terminal amino acid of the protein.
- C Isolation of other FcR.
- Other FcR within and between species that are homologous at the nucleic acid, protein and functional levels. Because of substantial sequence homologies, the cDNA clones described herein would enable the isolation of related sequences encoding FcR from man, the mouse and other species.
- the Principal Novelty of the Invention includes but is not limited to: (i) Description of a molecule, the FcR, which has the capacity to bind the Fc piece of Ig. (ii) The structural arrangement of the 2 extracel lular domains which show homology to each other in both man and mouse, (iii) The similarity of these domains in man and mouse. (iv) Differences in the intracallular regions in man and mouse; indicating that signals can be transmitted by different structures. (v) cDNA and other DNA and RNA material encoding for the receptor. (vi) Various vectors including materials. Table 1. The N-terminal sequence of the Fc receptor and amino acid sequences of Fc receptor peptides.
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Abstract
A receptor for the Fc portion of immunoglobulin, derived from mouse or human cells, the receptor exhibiting the ability to bind to the Fc portion of mouse and human immunoglobulin and comprising a transmembrane proteine having about 280-301 amino acids including two substantially regularly spaced pairs of Cys residues and two or four potential N-linked glycosylation sites. The present invention also provides for a nucleotide sequence, gene, cDNA clone or a vector containing same capable of encoding the above receptor.
Description
TITLE: FC RECEPTOR FOR IMMUNOGLOBULIN
Th i s i n v en t io n r e l a t e s t o a F C r e c e p t o r f o r immunogobulin.
In one aspect this invention relates to cDNA clones encoding the murine and human Fc receptor for IgG. The murine clones mere sequenced and expression of mRNA and the cel l surf ace Fc receptor investigated. The murine Fc receptor is a 301 amino acid transmembrane glycoprotein with tωo homo l ogous extrace l lu l ar domains that are a l so homo l ogous to members of the Ig superf ami l y. The Fc receptor has 4 sites of N linked glycosylation and a long 94 amino acid cytoplasmic tail. Northern analysis of mRNA, immune complex binding and serological studies of cell lines and transfectants demonstrated that the receptor encoded by the cDNA clone binds murine IgG2b and possibly other Ig. Human Fc(gamma)R cDNA clones uiere also isolated and found to encode a glycosylated transmembrane molecule that bears striking homology to both the betal and alpha mouse FcR at both the nucleic and amino acid levels.
The present invention provides a receptor for the Fc portion of immunogobulin and being derived from ATCC ,
ATCC or ATCC
The present invention provides a receptor for the Fc portion of immunogobulin, the receptor exhibiting the abi l ity to bind to the Fc portion of mouse and human immunogobulin.
The receptor preferably exhibits an ability to bind to antibodies and immune complexes, has a size of 40-70 kilodaltons, is formed from mRNA of a size of about 1.8, about 2.0, about 1.9, about 1.4 or about 2.4 kilobases, and includes tuio substantially regularly spaced pairs of Cys residues, tuio or four potential N-linked glycosylation sites. The present invention includes a receptor f or the Fc portion of immunogobulin and having at least 40 %, more preferably at least 50% and stil more preferably atleast 60% homology with the above receptor.
In one instance the receptor includes the amino acid
In one instance the receptor includes the amino acid sequences:-
(a) met leu leu trp thr ala val leu asn leu ala ala gly thr his asp leu pro lys ala val val lys leu glu pro pro trp ile,
(b) glu gin thr arg leu ser asp pro val asp leu gly val ile, and
(c) lys gly ser leu gly arg thr leu his gin ser lys pro val thr ile thr val gin gly pro lys, and
(d) glu ala glu asn thr ile thr tyr ser leu leu lys his pro glu ala leu asp glu glu thr glu his.
In a preferred instance the receptor includes at least one of the amino acid sequences:-
(a) Met Glu Ser Asn Trp Thr Val His Val Phe Ser Arg Thr Leu Cys His Met Leu Leu Trp Thr Ala Val Leu Asn Le u Ala Ala Gly.
(b) Cys Glu Gly Thr His Asn Pro Gly Asn Ser Ser Thr Gin Trp Phe His Asn Gly Arg Ser Ile Arg Ser Gin Val Gin Ala Ser Tyr Thr Phe Lys Ala Thr Val Asn Asp Ser Gly Glu Tyr Arg Cys.
(c) Cys His Ser Trp Arg Asn Lys Leu Leu Asn Arg Ile Ser Phe Phe His Asn Glu Lys Ser Val Arg Tyr His His Tyr Ser Ser Asn Phe Ser Ile Pro Lys Ala Asn His Ser His Ser Gly Asp Tyr Tyr Cys.
(d) Leu Pro Val Leu Thr Ile Val Ala Ala Val Thr Gly Ile Ala Val Ala Ala lie Val Ile lie Leu Val Ser Leu Val Tyr Leu.
(e) Lys Lys Lys Gin Val Pro Ala Leu Pro Gly Asn Pro Asp His Arg Glu Wet Gly Glu Thr Leu Pro Glu Glu Val Gly Glu Tyr Arg Gin Pro Ser Gly Gly Ser Val Pro Val Ser Pro Gly Pro Pro Ser Gly Leu Glu Pro Thr Ser Ser Ser Pro Tyr Asn Pro Pro
Asp Leu Glu Glu Ala Pro Lys Thr Glu Ala Glu Asn Thr Ile Thr Tyr Ser Leu Leu Lys His Pro Glu Ala Leu Asp Glu Glu Thr Glu His Asp Tyr Gin Asn His Ile.
(f) N S G P R N L W L L Q P L T V L L L L A S A D S Q A A.
(g) C Q G A R S P E S D S I Q W F H N G N L I P T H T Q P S Y R F K A N N N D S G E Y T C.
(h) C H S W K D K P L V K V T F F Q N G K S Q K F S R L D P T F S I P Q A N H S H S G D Y H C.
(i) S P M G I I V A V V I A T A V A A I V A A V V A L I Y C. (j) R K K R I S A N S T D P V K A A Q F E P P G R Q M
I A I R K R Q L E E T N N D Y E T A D G G Y M T L N P R A P T D D K N I Y L T L P P N D H V N S N N.
The present invention also provides a nucleotide sequence, gene, cDNA clone, or a vector for same adapted to encode or to produce a material adapted to encode for the receptor above or a fragment thereof.
The present invention also provides a nucleotide sequence, gene, cDNA clone, or a vector for same adapted to encode or produce a material adapted to encode for the leader sequence, extracellular region, transmembrane region or intracellular region of the receptor above.
The present invention also provides a cDNA clone, gene or nucleotide sequence being incorporated in ATCC ,ATCC or ATCC and capable of encoding for a receptor for the Fc portion of immunogobulin or a fragment thereof and a material being ATCC ,ATCC , or ATCC
A preferred nucleotide sequence, cDNA clone, gene or vector containing same and capable of encoding for a receptor for the Fc portion of immunogobulin includes the nucleotide sequences:-
(a) ATG CTA CTG TGG ACA GCC GTG CTA AAT CTT GCT GCT GGG ACT CAT GAT CTT CCA AAG GCT GTG GTC AAA CTC GAG CCC CCG TGG ATC,
(b) GAG CAG ACC CGC CTC AGC GAC CCT GTA GAT CTG GGA GIG ATT,
(c) AAA GGA AGT CTA GGA AGG ACA CTG CAC CAG TCC AAG CCT GTC ACC ATC ACT GTC CAA GGG CCC AAG, and
(d) GAG GCT GAG AAC ACG ATC ACC TAC TCA CTC CTC AAG CAT CCC GAA GCC TTG GAT GAA GAA ACA GAG CAT.
In a preferred instance the nucleotide sequence, cDNA clone, gene or vector containing same includes at least one of the nucleotide sequencess:-
(a) ATG GAG AGC AAC TGG ACT GTC CAT GTG TTC TCA CGG
ACT TTG TGC CAT ATG CTA CTG TGG ACA GCC GTG CTA AAT CTT GCT GCT GGG.
(b) TGC GAA GGG ACC CAC AAC CCT GGG AAC TCT TCT ACC
CAG TGG TTC CAC AAT GGG AGG TCC ATC CGG AGC CAG GTC CAA GCC AGC TAC ACG TTT AAG GCC ACA GTC AAT GAC AGT GGA GAA TAT CGG TGT.
(c) TGC CAT AGC TGG AGG AAC AAA CTA CTG AAC AGG ATC
TCG TTC TTC CAT AAT GAA AAA TCC GTG AGG TAT CAT CAC TAC AGT AGT AAT TTC TCT ATC CCC AAA GCC AAC CAC AGT CAC AGT GGG GAC TAC TAC TGC.
(d) TTA CCA GTA TTG ACA ATT GTG GCT GCT GTC ACT GGG
ATT GCT GTC GCA GCC ATT GTT ATT ATC CTA GTA TCC TTG GTC TAT CTC.
(e) AAG AAA AAG CAG GTT CCA GCT CTC CCA GGA AAC CCT
GAT CAC AGG GAA ATG GGA GAA ACC CTT CCA GAG GAA GTA GGT GAG TAC AGA CAG CCC TCT GGG GGC TCA GTG CCT GTC AGC CCA GGG CCT CCA TCT GGA CTG GAG CCA ACA AGC AGC AGC CCA TAC AAT CCT CCT GAT CTG. GAA GAA GCT CCC AAA ACT GAG GCT GAG AAC ACG ATC ACC TAC TCA CTC CTC AAG CAT CCC GAA GCC TTG GAT GAA GAA ACA GAG CAT GAT TAC CAA AAC CAC ATT TAG.
(f) AAT TCC GGT CCC AGA AAC CTG TGG CTG CTT CAA CCA
TTG ACA GTT TTG CTG CTG CTG GCT TCT GCA GAC AGT CAA GCT GCA.
(g) TGC CAG GGG GCT CGC AGC CCT GAG AGC GAC TCC ATT
CAG TGG TTC CAC AAT GGG AAT CTC ATT CCC ACC CAC ACG CAG CCC AGC TAC AGG TTC AAG GCC AAC AAC AAT GAC AGC GGG GAG TAC ACG TGC.
(h) TGC CAC AGC TGG AAG GAC AAG CCT CTG GTC AAG GTC
ACA TTC TTC CAG AAT GGA AAA TCC CAG AAA TTC TCC CGT TTG GAT CCC ACC TTC TCC ATC CCA CAA GCA AAC CAC AGT CAC AGT GGT GAT TAC CAC TGC.
(i) TCA CCA ATG GGG ATC ATT GTG GCT GTG GTC ATT GCG
ACT GCT GTA GCA GCC ATT GTT GCT GCT GTA GTG GCC TTG ATC TAC TGC.
(j) AGG AAA AAG CGG ATT TCA GCC AAT TCC ACT GAT CCT
GTG AAG GCT GCC CAA TTT GAG CCA CCT GGA CGT CAA ATG ATT GCC ATC AGA AAG AGA CAA CTT GAA GAA ACC AAC AAT GAC TAT GAA ACA GCT GAC GGC GGC TAC ATG ACT CTG AAC CCC AGG GCA CCT ACT GAC GAT AAA AAC ATC TAC CTG ACT CTT CCT CCC AAC GAC CAT GTC AAC
addition or substitution of amino acids or by chemical or irradiation modification not substantially deleteriously affecting the ability to bind to the Fc portion of immunogobulin and a nucleotide sequence, gene, cDNA clone, or a vector for same as above and modified by deletion, addition or substitution of nucleotides or by chemical or irradiation modification not substantially deleteriously affecting the ability to code for a receptor for the Fc portion of immunogobulin or a fragment thereof. DESCRIPTION OF PREFERRED ASPECTS Fc receptors (FcR) form a major groups of cell membrane glycoproteins involved in homeostasis of the immunological system. Specific receptors for all immunoglobulin (Ig) classes have been defined and are found on a wids variety of immune cells - B cells and some T cells as well as myeloid cells and non - haemopoietic cells (Hubscher et al, 1971 ; Dickler, 1976; Tsay et al, 1980; Unkless et al, 1981 ). The principal role of these receptors is to bind (Ig) via the Fc region of the Ig molecule and it is through this interaction that a wide range of biological effects are mediated. These include phagocytosis of immune complexes by macrophages (Leslie, 1980) and neutrophils (Capron et al, 1984) and direct or indirect regulation of antibody production by membrane bound or soluble Fc receptor (Yodoi et al, 1980; Fridman et al, 1981 ; Kolsch et al, 1983). In the murine system efforts have been devoted to the analysis of the receptor for IgG1/IgG2b (Fc(gamma)1/(gamma)2bR) which is important in the binding of immune complexes (Unkless, 1974; Kurlander et al, 1984). To investigate these receptors further at both the structural and functional level, as well as to study its relationship to other FcR, we have produced a monoclonal anti-Ly-17.2 antibody that defines a genetic polymorphism of the Fc(gamma)R genes (Hibbs et al, 1985). This antibody was used to immunopurify receptors for which we have:- 1. isolated and determined the partial amino acid; 2. isolated and determined the complete nucleotide sequence of cDNA clones termed pFc24 and pFc113 encoding the
betal Fc(gamma)R receptor. 3. Shown by Northern analysis the presence of multiple FcR transcripts in different cell types, these variant transcripts are termed beta 2 and alpha. 4. Using the mouse FcR cDNA and oligonucleotide probes (based on pFc 113 DNA sequence) isolated cDNA clones termed pFC 3.0, 3.1 and 3.47 encoding human FcRs that are homologous to the mouse FcR. MATERIALS AND METHODS Monoclonal Antibodies: The monoclonal anti-Ly-17.2 and Ly-2.1 antibodies have been previously described (Hibbs et al 1985, Hogarth et al 1982). Preparation of F(ab')2 fragments from purified antibody was performed as described (16). The 2.4 G2 antibody has also been described before (Unkless 1979). Purification of FcgammaR: J774 macrophage cells (2x1010) were harvested from ascites fluid obtained from (CBAxB ALB /c)F1 mice and immediately lysed in cold phosphate buffered saline (PBS) / 0.5% Nonidet P-40 (PBS/0.5% NP40) pH 7.4 containing 1 % aprotinin (Sigma, St. Louis, M0) and 1mM phenylmethylsulfonyl fluoride (Sigma, St. Louis, M0). An additional 2x107 cells were surface labeled with 125I, and pooled with the cold lysate. After lysis for 1 hour at 4ºC, the lysates were clarified and incubated for 1 hour at 4ºC with anti-Ly-17.2 antibody conjugated Sepharose 4B (Pharmacia, Uppsala, Sweden). The immun oabsorb en t was washed three times in 0.6M NaCI, 0.0125M KH2PO4, pH 7.4, three times in PBS/0.5 % NP40 pH 7.4 and a further three times in 0.5 % deoxycholate in 100mM Tris-HCl pH 8.0. The immunoabsorbent was packed into a column and the bound material eluted with 0.5% sodium dodecyl sulfate (NaDodSO4) in 0.1M triethylamine pH 11.5 and freeze dried. The purity of the Fc gamma R preparations was assessed by NaDodS04/polyacrylamide gel electrophoresis ( NaDod SO 4 /P AG E) and proteins were detected by Coomassie blue staining or by autoradiography. Protein Sequence Analysis: Protein samples were carboxamidomethylated and ethanol precipitated prior to
sequencin g. Brief ly , samp l es were dissol v ed in 50mM boric acid , 0.1 % (w/v ) SDS and 10mM dithiothreitol pH 8.0 (NaOH) and heated to 60°C f or 1 hour. Iodoacetamide was added to a final concentration of 22mM and the samples incubated for 15 minutes at ambient temperature in the dark. Ice cold ethanol containing 50mM HCl was added and the protein al lowed to precipitate at -20°C for 2 hours. The precipitate was co l lected by centrifugation , disso l v ed in C F 3 COOH and sequenced by automatic Edman degradation using an Applied Biosystems 470A Sequencer (Foster City, CA., USA) Sequencing and phenylthiohy dant oin amino acid identification techniques have previously been described in detail
Preparation of FcgammaR Peptides: FcgammaR peptides were obtained by digesting samp les of affinity purif ied, carboxamidome thylated Fc gamma R with either S. aureus V8 protease (Miles Laboratories) (Hibbs et al 1986 ) lysine-C proteinase (according to manuf acturers ins tructions , Boehringer Mannheim, Mannheim, FRG) or cyanogen bromide ( C N B r ) . P e p t i d e s w e r e p u r i f i e d b y r e v e r s e p h a s e ch roma t ogr ap h y us ing a Ph armac ia f a s t protein l iquid chromatography (FPLC). The proteinase digested material was applied to a Pep RPC HR5/5 (C2/C18) reverse phase column (Pharmacia) whi le a Pro RPC HR 5/10 (C1 /C8) rev erse phase co l umn ( P h a rmac ia ) wa s u s e d t o p urif y CN B r p ep tid e s . Peptides were eluted with ascending linear acetonitrile gradients using 20mM ammonium f ormate as a buff er and an absorbance trace at 214nm to detect peptide peaks. Selected peak f ractions were then rechromatographed on the same column again using linear gradients of acetonitrile but in this case containing 0.11% ( v/v ) unbuf fered CF3COOH to promote ion suppression.
P r e p a r a t i o n o f O l i g o n u c l e o t i d e P r o b e s : O l igodeox ynuc l eotide prob es were sy nthesized by the phosphor amidi te method using an Applied Biosystems 380A DNA Synthesizer. The oligonucleotide probes were purified from crude mixtures by reverse phase HPLC and were radiolabeled with [ gamma32P] ATP and T4 po lynucleotide kinase to 2x108 dpm/ug (Maniatis et al 1982).
Library Screening: The cDNA library used in the murine study was kindly provided by Drs N. Gough and A. Dunn (Ludwig Institute for Cancer Research, Melbourne, Australia) and was constructed using poly A+ mRNA from the FcR+ myelomonocytic cell line WEHI 3B (Gough et al, 1985). The cDNA was GC tailed into the SacI site of the pJL3 vector, ωith the result that all cDNA inserts are flanked by EcoRI sites. Oligodeoxynucleotide probes (Tables 2,3) were constructed using the phosphoramidite method (Winnaker and Dorper, 1982) and were complementary to mRNA for use in Northern analysis. The cDNA library was screened with end labeled oligonucleotide probes using T4 polynuc. leotide kinase to >109 dpm/ug DNA. Hybridisation and washing conditions were as previously described (Hibbs et al., 1986). Northern Blot Analysis of RNA: Poly A+ mRNA was obtained from lysates of in vitro grown mouse cells and normal human spleen . PolyA+ mRNA (5ug of polyA+ or variable amounts of total mRNA) was denatured and electrophoresed in 1% agarose gels formaldehyde, transferred to nylon membrane and hybridised overnight (Maniatis et al, 1982). Hybridisations with the cDNA probe were performed in 5xSSPE, 0.1% SDS, 50% formamide, 0.125% skim milk powder and 1ug/ml degraded DNA, at 42°C for 16 hrs. The filters were then washed twice in 1xSSPE at room temperature, then twice in 0.2xSSPE at 50°C for 16 hrs. Hybridisations with the oligodeoxynucleotide probe were performed in 5xSSPE, 6% SDS, 10x Denhardts and 1ug/ml degraded salmon sperm DNA at 42ºC. Filters were washed twice in 2xSSPE at room temperature then twice in 1xSSPE at 42°C. The cDNA probe was labelled by n i c k t r a n s l a t i o n a n d u n i n c o r p o r a t e d l a b e l r e m o v e d o n a spinning sepharose G50 column (Maniatis et al, 1982). The oligodeoxynucleotide probe was end labelled with 32P- ATP for 1 hour at 37ºC using T4 polynucleotide kinase then added directly to the hybridisation mix (Maniatis et al, 1982). Southern Analysis: DNA was prepared from C57BL/6 mouse spleen, human thymus and peripheral blood (Maniatis et al, 1982); 20ug of DNA digested with appropriate restriction
e n z ym e ac c ord in g t o t h e m a nu f ac tu r er ' s in st r uc t io n s (Pharmacia , Uppsa l a, Sweden) was electrophoresed in a 0.5% agarose gel , transferred to a nylon membrane and hybridised in 5xSSC, 0.1 % SDS, 50% formamide, 20mM phosphate buffer pH 6.8 and 0.125% skim mil k powder ov ernight with randomly primed or nick translated cDNA at 55°C. Filters were washed 4 times in 1 xSSC, 0.1 % SDS, 0.125% skim milk powder then t w i c e i n 0.2 x S S C , 0.1 % S D S a t 55 ° C , d r i e d a n d autoradiographed. Southern anal ysis was performed on cDNA clones pFc24 , pFc113 , HFc3.47 , HFc3.1 and HFc3.0 fol lowing EcoRI digestion, electrophoresis on 1 % agarose gels followed by transfer to nylon membranes (Hibbs et al , 1986). Filters containing pFc24 or pFc113 were probed as described (Hibbs et al , 1986). Filters containing HFc3.1 HFc3.0 or HFc3.47 were probed with nick trans l ated cDNA or end l abel l ed oligonucleotides by hybridisation at 35° in 20% formamide, 5xSSC , 0.1 % SDS , 0.125% skim milk powder f or 16 hours , then washed in 1 xSSC at 35°C. Detection of FcR by EA rosetting : Sheep erythrocytes were washed f our times in norma l sa line. Packed cel l s (50ul) were added to 4ml of trinitrobenzene sulphonate (12.5 mg /m l i n ph o sp hat e b u f f e red sa l ine (P BS ) ) a n d th e pH adjusted to pH 7.2. The mixture was incubated at room temperature for 20' then washed three times. The cel ls were resuspended in 20m l of anti-TNP antibody (K1 , IgG2b or A3IgG1 ; L op e z et a l . , 1 983 ) or r ab bit I g G anti sh eep erythrocytes at a subhaemagg lutinating dilution to giv e IgG2b-EA, IgG1 -EA or rabbit IgG-EA After a 20' incubation at r oom temp era ture , th e c e l l s were wa sh e d twice an d resuspended to 1 % in PBS + 5% BSA and 10mM azide. EA rosetting for detection of FcR was then performed using the sensitized erythrocytes (Parish and Haywood, 1974). Cell lines: The cel l lines used in this study were the BALB/c macrophage tumour J774, BALB/c myel omonocytic cel l line WEHI 3B , and the AKR thymαma K36. Cel l line were maintained in vitro in Dulbecco's modified Eagle's medium or RPMI 1640 both supplemented with 10% fetal calf serum. Serological Detection of Ly-17 (FcR) expression: Cell lines
were tested for FcR expression using a monoclonal anti-Ly17.2 antibody and rosetting with sheep anti-mouse Ig coated erythrocytes (Hibbs et al., 1985; Parish and McKenzie, 1978 ) . DNA sequencing: The cDNA inserts of pFc24, pFc113 were sequeπced by either chemical cleavage described by Maxam and Gilbert (1980) or Sanger di-deoxy sequencing (Sanger et al., 1977) after subcl oning into M13mp8 , M13mp9, or M13mp18 according to the sequencing strategy outlined in Fig. 3A. The cDNA inserts of the human FcR clones were also sequenced by the dideoxy nucleotide method after subcloning fragments into M13 vectors. Isolation of Human FcR cDNA: A human monocyts library ( f rom the h uma n TH P -1 c e l l l in e ) construct ed in t he lamdagt 10 vector was used to isolate human Fc(gamma)R cDNA. Dual screenings were performed using both the mouse betal cDNA clone and a pool of oligonucleotide probes constructed from the nucleotide sequence of the mouse betal Fc(gamma)R cDNA. This poo l consisted of three unique probes which co rre sponded to nuc l eotides 1 37- 185 in the mous e ( Nterminus), nucleotides 545-574 (second extracel lular domain) and nucleotide 956-1000 (C-terminus). After four rounds of screen in g , se v era l c l ones ( HFc3.1 , 3.0 , 3.47) wh ich hybridised with both the murine cDNA and o l igonucleotide probe pool were isolated and further characterised. Phage DNA was prepared from these. Southern hybridisation analysis of EcoRI digested l ambda DNA confirmed that the murine betal Fc(gamma)R cDNA probe hybridised with cDNA inserts from all clones. Probing southern bl ots of EcoRI digssted HFc3.1 , 3.0 , 3.47 independently with each of the three murine oligonucleotide probes , showed that onl y the mouse N-terminal probe hybridised to the inserts from HFc 3.1 , 3.0 and only the mouse C-terminal probe hybridised to the 1.9kb insert from HFc3.47. In addition, DNA inserts from HFc3.1 , HFc3.0 and HFc3.47 cross-hybridised. The DNA inserts were purified and subcloned into the vector pJL4 to give the recombinant plasmids. RESULTS AND DISCUSSIONS
Reference is made to the Figures of drawings as follows: FIGURE LEGENDS Figure 1. One dimensional Na Dod S 04 / PAGE analysis of the IgG FcR of J774 macrophage cells. Sizes are given in kDa. (A) Immunoprecipitation of Fc gamma R from surface iodinated J774 cells. Immunoprecipitations were performed with anti-Ly-2.1 F(ab')2 (Lane 1) or with anti-Ly-17.2 F(ab')2 (Lane 2). (B) NaDodSO4/PAGE and Coomassie staining of a typical preparation of affinity purified FcR used for protein sequencing and peptide generation. Lanes 1-6 represent successive fractions of eluted material from the affinity column (C). Autoradiogram of NaDodSO4/PAGE of affinity purified 125I-1abelled FcR. Lanes 1-6 are as for B, above. Figure 2. Southern blot analysis of pFc24 and pJL3. One microgram of pFc24 (lanes B,D,F) or pJL3 (lanes A,C,E) was digested with EcoRI and electrophoresed in 1% agarose gsl. The DNA was transferred onto nitrocellulose and hybridised with [32P] labelled probe 1 (lanes A,B), [32P] probe 2 (lanes G,D) and [32P] probe 3 (lanes E,F). Hinfl fragments of pBR322 DNA were used as markers to estimate the size of the cDNA insert of pFc24 (shown in kb). The relative position of pJL3 is also indicated (5.49kb). Figure 3. (A) Partial restriction map and sequencing strategy for cDNA inserts of clones pFc24 and pFc113. Restriction enzymes sites shown are A, Alul; B, BamHI; E, EcoRI; S, Sau3A1; and V, PvuII. The EcoRI sites shown are present in the polycloning site of the pJL3 vector. The shaded area represents sequence encoding the signal sequence and coding sequence for the mature protein is located within the open box. Sequence from 5' and 3' untranslated regions is indicated by the solid line while unsequenced untranslated regions are represented by the dashed line. Sequence was obtained across all restriction sites except for the PstI sites and both strands of the coding region were entirely sequenced. (B) Nucleotide and deduced amino acid sequence of the mouse
FcR encoded by pFC 113. Amino acids are numbered above the line in decades commencing at the amino terminal Thr deduced by protein sequencing (Hibbs et a l , 1986). Nucl eotides are numbere d a t the end of t h e l ine a nd the 5 ' an d 3 ' untrans lated regions are showπ in cl osed up type. The signa l sequence is numbered from residue -29 to -1 and the transmembrane region (Tm) is underlined by a broken line. The sequences underlined with a so lid line correspond to sequences identical to the amino terminal sequence (NH2) and to amino acid sequence of peptides (L9 , V17 , 2V16 , 2V8 , CNBR, L5, L3, L4, V10, V11 ) isolated from the immunopurified FcR (Hibbs et al., 1986). Other notation is as fo l lows: o, first Cys in each domain; 0 second Cys in each domain; Nlinked glycosylation sites. The nucleotide sequence of pFc24 is embodied within the cDNA insert of pFc113 from nucleotides 61 to 1023. Figure 4 Amin o acid s equen c e c omp ariso n of Fc(gamma)R domains (amino acids 5-116 for domain 1 and amino acids 118-175 for domain 2) to each other and to Ig related molecules. Identical residues are boxed and a "-" indicates a break in sequence f or alignment purposes. (A) The FcR domains were aligned with each other to give the optimal score using the ALIGN program with a matrix bias of +6 and brsak penalty of 6 (see text). (B) Alignment of amino acid sequences around the first Cys residue of both FcR domains with Cys residues of the corresponding first Cys of domains of Ig and Ig related molecules. Amino acids common to FcR domains and other sequences are boxed ; V 2 , M OPC 104E (Apella, 1977); Vk, MOPC 149 (Nishioka and Leder, 1980); T4, L3T4 (Classon et al , 1986; Tourvieil le et al , 1986; G. Clark, N. Deacon Personal Communication); N-CAM, Neural Cell Adhesion Molecule (Hemperly et al, 1986); Poly IgR, Poly Ig Receptor (Rostov et al , 1984). (C) Alignment of sequences around the second Cys of FcR domains with the second Cys of domains of Ig and Ig related molecules as in C above except Vk which is derived from an antidigoxin antibody (Nov otny and Margol ies, 1983). Common residues are boxed as abo v e. (D) Alignment of lambdaJ regions from human (Engelhard and
Hilschmann, 1975) and mouse (Apel la, 1977) , with J-like sequences from the FcR domains. Figure 5 Analysis of FcR mRNA transcripts in mouse c e l l l in e s . ( A ) N o rt h e r n b l ot o f R N A f r om F cR erythroleukaemia cel ls F4N (a) or FcR+ WEHI 38 cells (b) probed with 840 base pair Bam HI - Eco RI fragment of pFc24 (Eco RI site of the vector polycloning site). (B) Northern blot of poly A+ RNA from FcR+ cel l lines, WEHI 3B (a); J774 macrophage cells (b); K36 T lymphoma (c); and FcR- cells F4N (d), probed with an oligodeoxynucleotide corresponding to nucleotides 542-674 in pFc113. The position of 28S and 18S rRNA is indicated. Figure 6 Southern analysis of the FcR gene. Spleen DNA from C57BL/6 mice was digestsd with (a) Hindlll, (b) EcoRI or (c) PstI and probed with tha 840bp BamHI-EcoRI f ragment of pFc24 (see Legend Fig. 3). Molecular sizemarkers in Kb (Hind III digested lamdaphage DNA) are indicated. Figure 7 Southern blot analysis of human FcR clones HFc3.1 (a) and HFc3.47 (b). HFc3.1 or HFc3.47 DNA was digested with EcoRI and electrophoresed in 1% agarose gel, transferred to nylon membranes as per the materials and methods and hybridised with A, pFc24 cDNA; B, probe 1.5; C, probe 1.10; D, probe alpha or E, probe 1.6. The position of the 1.5kb cDNA insert of HFc3.1 and of the 1.9kb insert of HFc3.47 is indicated on the right hand side of each figure. Figure 8 Nucleotide and predicted amino acid sequence of the human FcR encoded by HFc3.1 Nucleotides are numbered every decade and the translated sequence is found above the nucleotide sequence. Amino acids are numbered above the line and number 1 indicates the N-terminal residue. The incomplete signal sequence is underlined by a broken line to residue -1. The two glycosylation sites are marked by stars and the single hydrophobic transmembrane region is underlined by a solid line. Cysteine residues involved in disulphide bonding are circled. The "intronlike" sequence is located between the vertical arrows. Figure 9 Homology of the human FcR encoded by
HFc3.1 cDNA with the mouse alpha and betal Fc(gamma)R. Alignment of the nucleotides of the human FcR with both mouse alpha (A) and betal (B) Fc(gamma)R. Breaks (indicated by dashes) in the sequence have been introduced to optimize the alignment. Amino acid residues common to the human FcR encoded by HFc3.1 and the alpha FcR (A) or betal (B) are shown by asterisks. The human (HFC3.1 ) , mouse alpha or beta FcR leader sequence, extracellular domain, transmembrane domain and cytop lasmic domains are indicated by the sequences between the vertical arrows. The cysteine (C) residues within the extracellular domains (involved in S-S bonds) are identified by the solid circles. Figure 10 Partial nucleotide sequence and predicted amino acid sequence for HFc3.47 cDNA derived from two nonoverlapping HFc3.47 fragments and identification of homologous regions in the beta (1 or 2) FcR of the mouse. The HFc3.47 nucleotide and amino acid sequences are shown as the upper sequences in A and the lower sequences in B. Diamonds indicate nucleotide identities where as asterisks indicate amino acid identities. An "X" in the sequence indicates an unknown residue. Figure 11 Nucleotide and predicted amino acid sequence of the human FcR encoded by HFc3.0. Nucleotides are numbered every decade and the translated sequence is f ound abov e the nuc l eotide sequence. Amino acids are numbered above the line and number 1 indicates the Nterminal residue. The incomplete signal sequence is underlined by a broken line to residue -1. The two glycosylation sites are marked by stars and the single hydrophobic transmembrane region is underlined by a solid line. Cysteine residues involved in disulphide bonding are circled. Figure 12 Homology of the human FcR encoded by HFc3.0 cDNA with the mouse alpha and betal FcR. Alignment of the nucleotides of the human FcR with both mouse alpha (A) and betal (B) FcR. Amino acid residues common to the human FcR encoded by HFc3.0 and the alpha FcR (A) or beta 1 (B) are shown by asteriks. The human (HFc3.0) mouse alpha
or beta FcR leader sequence, extracel lular domain, transmembrane domain and cytoplasmic domains are indicated by the sequences between the vertical arrows. The cysteine (C) residues within the extracellular domains (involved in S-S bonds) are identified by the solid circles. Figure 13 Northern blot analysis of total RNA isolated from normal human spleen and probed with the cDNA insert from HFc3.1. The 28s and 18s ribosomal RNAs are indicated. A, 20ug RNA loaded; B, 5ug RNA loaded; C No RNA. Figure 14 Southern blot analysis of the human FcR gene. Human thymus DNA (A) and human peripheral leukocyte DNA (B) was digested with 1 , Hind III; 2, PvuII; 3, EcoRI and 4, PstI and probed with the cDNA insert from HFc3.1. Molecular size markers (Hindlll digested RNA) are indicated. Isolation of full length cDNA clone: The Fc(gamma)R has been purified to homogeneity using the anti-Ly-17.2 antibody (Fig. 1). Protein and peptide sequencing studies have enable one third of the molecule to be sequenced (Table 1). Consensus oligodeoxynucleotide probes constructed from the protein sequence (Table 2) were used to isolate a cDNA clone (pFc24). Southern analysis established that the cDNA insert of pFc24 reacted with the probes (Fig. 2). MaxamGilbert sequencing of the 5' and 3' ends of pFc24 (Fig. 3A,B) indicated it that it was not full length since no entire leader sequence or inframe termination codon was apparent at the 5' and 3' ends respectively. A full length cDNA clone, pFc113 (Fig. 3) was isolated by reprobing the WEEHI 3B library with oligodeoxynucleotide probes constructed from the nucleotide sequence of the 5' and 3' ends . of pFc24. These probes corresponded to nucleotides 140-187 (probe 1.5) or 959-1000 (probe 1.6) (Fig. 3B, Table 3) and only clones to which both probes hybridised were subsequently Isolated. The cDNA insert of pFc113 contains approximately 2.0 kilobase pairs whereas that of pFc24 has only 962bp but is entirely embodied in pFc113 between nucleotides 61 and 1023. Nucleotide and amino acid sequence: The amino acid sequence predicted from the nucleotide sequence of pFc113 (Fig. 38) indicates that mature FcR is a membrane molecule
composed of 301 amino acids and is synthesised with a 29 amino acid leader sequence. The amino acid sequences of 10 of 11 peptides we had previously sequenced from immunopurif ied FcR were found encoded by pFc113 cDNA (Fig. 3B, Hibbs et al, 1986). Miscalling of several amino acid residues during sequencing of the peptides accounts for the differences between the sequence of peptides L5 and CNBR and the predicted sequence of these regions from the cDNA clone. Also the CNBR peptide is preceded by a Trp not the predicted Met but it is known that CNBR will cleave on the C terminal side of Trp residues in acid solutions (Ozols et al, 1977). Several other important observations can be made from the predicted amino acid sequence. Firstly, a single transmembrane region of 28 amino acids exteπds from Leu180 to the sequence L y s 209 - L y s 210 - L y s 211 and separates the 94 amino acid long cytoplasmic region from the 179 extracellular amino acids. Secondly, the extracellular portion of the FcR molecule contains two regularly spaced pairs of Cys residues, the first pair Cys 28 and Cys 70 separated from each other by 41 amino acids and the second pair Cys 109 and Cys 153 separated by 43 amino acids. This regular arrangement suggests the extracellular portion may be organised into two disulphide bonded domains (see homologies below). Thirdly, four potential N-linked glycosylation sites are present in the extracellular region of the receptor, with two glycosylation sites located within each of the putative domains. These potential glycosylation sites have been verified as being authentic sites of carbohydrate attachment (Green et al, 1985 and see "Additional Structural Features of Murine FcR" below.) Homologies of Murine FcR: Comparison of the amino acid sequences within the FcR molecule (assessed using the Dayoff ALIGN programme, Dayhoff et al, 1983) indicated that there was a significant degree of internal homology within the extracellular domains (Fig. 4A). Using the mutation data matrix, scoring is based on the extent of mutation required for amino acid substitution in established protein families. The score for the optimal alignment is then represented as
the number of standard deviations by which the maximum score for the alignment of two sequences exceeds the score for a large number of alignments after randomization of the original sequences (Dayhoff et al, 1983). Arbitrary setting of the boundaries of these domains around the pairs of Cys residues showed that alignment of amino acids 5-86 (FcR, domain 1 ) with amino acids 88-175 (FcR, domain 2) gave 29% identical residues with an ALIGN score of 7.1 SO i.e. the probability of such an alignment occuring by chance is >108 and implies the tandem duplication of a single domain. Such repeated domain structures are evident in Ig and related molecules that comprise the Ig superfamily (Williams 1985). To further examine possible homologies to other molecules we undertook computer searches of a number of nucleic acid and protein data bases. These rev eal ed the FcR domain 1 was most homologous to murine Class II antigens in particular to the Ig like beta2 domain of I-Ebeta and ga v e a highl y significant ALIGN score of 8.3SD. In addition to the homo l ogy with C lass II antigens, other features of the FcR domains indicate their relatedness to Ig superf amily members. The homology to members of the Ig supergene family is seen principally around the Cys residues. The sequences surrounding cysteine residues 70 and 153 were shown to be highly representative of the consensus sequence (Gly-X-TyrX-Cys) around the disul phide-bonded Cys residue in Ig V region domains. In addition , the sequences f lanking Cys residues 28 and 109 were indicative of the disulphide-bonded Cys near the amino-terminus of the V-region of Ig chains and other Ig related molecules. Furthermore, the Trp residue located 13 residues downstream from Cys 28 and a Phe residue 13 residues downstream from Cys 109 are commonly observed in thi s p osition of I g - l ik e s tru ctur e s. Th e I g r e l at ed mo l ecu l e s Thy-1 and CD 4 , wh ich a l s o p o s se ss these characteristics have been shown experimental ly to contain intrachain disu lphide bonds (Wi l l iams and Gagnon , 1982 ; C l asson et al , 1986a). I t i s c l e a r t h e r e f o r e t h a t t h e r e c e p t o r f o r immunoglobulin shows a common evolutionary ancestry with its
ligand but comparison of entire Ig and FcR domains shows a low overall homology indicating that they must have diverged relatively early in evolution. The high degree of homology with MHC Class II molecules is interesting in the light of the physical association of some FcR with Class II molecules on the cell surface (Oickler and Sachs, 1974). In addition to ths poly Ig receptor (see above), we also sought homology to other IgG binding molecules. No homo l ogy of FcR domai n s to S t ap h y l o cocca l pro te in A (Sjodah l , 1977) was f ound. The Fc(gamma)R receptor described herein is highly homologous to other betal Fc(gamma)R except for a stretch of 9 amino acids in the cytoplasmic tail from Gly241 to Pro249. The discrepancies between the nucleotide/amino acid sequences shown in Fig. 3B may have arisen by the omission of three nucleotides. The nucleotide and predicted amino acid sequence of the betal form of the Fc(gamma)R therefore is that showπ in Fig. 3B. In addition, another form of the Fc(gamma)R is highly homologous to the FcR described here -almost certainly being a splice variant. The splice site occurs in the region encoding the intracellular domain indicating that the betal and beta2 forms of the FcR have identical extracellular domains. A third form of the FcR has also been identified by cDNA cloning studies and designated the alpha FcR The mature alpha protein shows a little variation from the receptor described herein with approximately 7% variation in amino acid content of the ligand binding domains. All major structural features in the domains of the three variants (alpha, betal , beta2) are conserved, i.e. (4 N-linked carbohydrate side chains, 2 pairs of cysteine residues). Thus molecular analysis of Fc(gamma)R clearly indicates that murine FcR are a family of highly homologous proteins. It should also be noted that the Ig binding proteins - protein A and the FcR described herein all have repeated ligand binding domains which may be necessary for stability and specificity of ligand binding. Additional Structural Features of Murine FcR: We have demonstrated that adjacent pairs of cystsine residues in
purif ied Fc(gamma)R are in vol ved in disu l phide bonding. Protein was purif ied b y a f f inity chroma togra ph y th en digested with proteolytic enzymes either before or after reduction of disulphide bonds with dithiothreitol. Digests were then fractionated by reversed-phase ch romat o gr a p hy . P e pti d e s p resent i n th e dig e st s o f unreduced Fc(gamma)R but absent from the digested reduced Fc( gamma ) R were s e que n ced a nd shown t o co rresp ond to disulphide-bonded peptides. The results obtained indicated that Cys 28 is disulphide-bonded to Cys-70 and that Cys-109 and 153 are involved in disulphide bonding. Extensive peptide sequencing has also determined that f our po s s ib l e N- l i nk ed g l c yo sy l at ion s it e s in mou se Fc(gamma)R are in fact authentic sites of carbohydrate addition. This was judged by the absence of an asparagine in the expected position in the peptide sequence. Expression of mRNA: Analysis of FcR expression in cell lines was then perf ormed by Northern, b lotting. Two mRNA transcripts were evident when probing poly-A+ mRNA from the WEHI 38 cel l l ine , with nick trans lated cDNA (Fig. 5A). These transcripts were absent f rom the FcR- cel l l ine F4N. Sinc e th ere is FcR h etero genity with r espect to both specificity and expression in cell lineages (Dickler, 1976; Unkless et al , 1981 ; Teil laud et al , 1985; mRNA from cel l lines of different lineages was examined (Fig. 5B) using an oligodeoxynuc l eotide probe (probe 1.10) (corresponding to nucleotides 545-574) that hybridised to both transcripts in WEHI 3B cel ls (Fig. 58, track a). Northern blots showed that while both transcripts ware present in the myelomonocytic cel l line WEHI 3B, the lower Mr species was predominant in J774 macrophage cells (Figs 5B, track b) and was completely absent from the FcR+T lymphoma K3B, where only the higher Mr sp ec ies cou l d b e d e tect ed. Th e pr ese nc e of mu l t ip l e Fc(gamma)R mRNA transcripts (termed alpha, betal and beta2, betal being identical to that encoded by pFc113 described herein) in different cell types was also noted. Rel ationship of mRNA transcripts and surf ace FcR : To estab l ish the re lationship between mRNA transcription and
surface Fc(gamma)R expression, we investigated the presence o f mR N A t ra n scr ip t s b y N o r th er n a n a l ys i s u s in g oligonucleotide probes specific for the betal , beta2 and alpha transcripts (Table 3) and compared this with immune complex binding (using rabbit IgG and various IgG isotypes) and whether the cells were Ly-17.2+ or 2.4G2+ at the surface (Table 4). The results indicats that the betal Fc(gamma)R is the receptor for IgG1/2b, heterologous IgG and possibly other Ig since cells which express only the betal receptor only can bind IgG1/IgG2b as well as rabbit IgG coated erythrocytes (Table 4). In addition, K36 cells have the Ly-17.2+ and 2.4G2+ molecules which have been shown to be identical and are epitopes on the Fc(gamma)R molecule (Unkless, 1979; Hibbs et al, 1985; Holmes et al, 1985). Furthermore, antibodies to these molecules completely inhibit the binding of IgG1/2b and rabbit IgG complexes to the cell surfaces. Thus the betal variant must code for molecules which have Fc binding ability and the epitopes detected by the 2.4G2 and Ly-17.2 antibodies. Both the Ly-17.2 and 2.4G2 epitopes are clearly present on the betal and beta2 molecules since both antibodies were used to purify these molecules for amino acid sequencing in this study. Finally, the pFc113 cDNA (in the pKC3 vector) described herein was transfected into FcR negative LTA-5 cells resulting in expression of FcR (Ly17.2) on the cell surface (Table 4) indicating that this clone encodes an immunoglobulin binding FcR. The interactions of the alpha and beta2 receptors with antibody and immune complexes remains to be precisely determined.WEHI 3B and J774 cells both express alpha and betal mRNA transcripts but only J774 cells express beta2 mRNA although both bind IgG1/2b and rabbit IgG complexes and are Ly-17+ (Table 4). Whilst cDNA expression experiments will be needed to define the specificity of these receptors, it is likely that the alpha, betal and beta2 receptors will have the same binding properties of immune complexes. Southern Blot Analysis: Southern hybridisation studies were performed to determine whether the heterogeneity observed at
the mRNA and protein levels was also apparent in the genome (Fig. 6). Probing of murine spleen DNA digested with Hind III or Pst I (Fig. 6, tracks a,c) generated two fragments to which the cDNA hybridised. Digestion with Eco RI (track b) also produced two major and several other weakly hybridised fragments. Thus it appears likely that only a single, or few, copies of a highly conssrved gene are present in the genome. The heterogeneity of receptors shown by serological studies, together with the presence of multiple mRNA transcripts indicates the receptors are likely to be a family of homologous proteins. Isolation of Human Fc(gamma)R cDNA Clones: Since human Fc can bind mouse and human immunoglobulin and have many similarities with mouse FcR, (Dickler, 1976; Anderson and Abraham,. 1980, Kulczycki et al, 1981; Perussia et al, 1983; Dorrington and Klein, 1983), it is likely that there is a high degree of structural and functional homology which conserved at the nucleic acid and amino acid levels. Thus we used the mouse cDNA pFc24 and a combination of oligonucleotides, probes 1.5, 1.6, 1.10 (Table 3) to screen a library constructed from mRNA isolated from human acute monocytic leukaemia cells THP-1. Several clones were isolated including HFc3.0, HFc3.1 and HFc3.47. The results (Fig. 7) demonstrated that, 1. pFc113 cDNA hybridised to the cDNA inserts of HFc3.1 and HFc3.47; 2. probe 1.5 hybridised to HFc3.1 cDNA but not to HFc3.47; 3. probe 1.10 hybridsed weakly to HFc3.1 cDNA but not to HFc3.47; 4. probe alpha did not hybridise to either clone and 5. probe 1.6 hybridised to HFc3.47 but not HFc3.1. Nona of the probes, except probe 1.6, hybridised to the lambda arms - the hybridisation of probe 1.6 to the lambda arms was due to incomplete digestion prior to Southern transfer. The likely homology of t h e H F c 3 .1 a n d H F c 3. 4 7 c D N A c l o n e s t o t h e mouse cDNA clones was then confirmed by nucleotide sequencing. Characterisation of Human FcR cDNA: The human cDNA inserts were subcloned into plasmid vectors. The complete nucleotide sequence of a cDNA encoding the human Fc(gamma)R and its predicted amino acid sequence is shown in Fig. 8.
Clone HFc3.1 contains sequence encoding the mature Fc(gamma)R protein and most of the leader sequence, as well as the entire coding sequence. The high degree of homology, seen both at the nucleotide and amino acid level, between the mouse FcR sequences and the sequence of HFc 3.1 , confirms that this clone encodes human FcR. The complete amino acid sequence of the human FcR, aligned with the sequences of mouse alpha and betal FcR is shown (Fig. 9A, B). Breaks have been introduced to optimize the alignment. The incomplete leader sequence of the human FcR encoded by HFc 3.1 is highly homologous to the leader sequence of the mouse alpha FcR (56% conservation of amino acids) (Fig. 9A) but bears no homology to the mouse betal Fc(gamma)R leader sequence (Fig. 9B). The N-terminus of the human Fc(gamma)R has been predicted on the basis of homology to the mouse alpha Fc(gamma)R N-terminal sequence. The region between the N-terminus and the first cysteine residue is the most highly conserved region between the two species, showing 71 and 73 percent amino acid homology with the murine betal and alpha Fc(gamma)R respectively (Fig. 9A, B). There is also a high level of amino acid conservation in the remaining extracellular portion between FcR of mouse and man. Like the mouse, the extracellular region is divided into two disulphide-bonded domains: the first pair of cysteine residues being separated by 41 amino acids and the second pair by 43 amino acids. Both disulphide bonded domains bear striking homology to tha mouse betal and alpha Fc(gamma)R. Amino acid sequence comparison of the first domain shows approx. 56 percent conservation between the human FcR and both mouse alpha and beta Fc(gamma)Rs (Fig. 9A, B). Similarly, there is approx. 56 percent conservation of amino acids in the second domain between the human F c ( g a m m a ) R a n d m o u s e a l p h a a n d b e t a F c R s . Two potential N-linked glycosylation sites are present in the extracellular region of the human FcR (one in each of the domains) (Fig. 8) and correspond to two of the four sites present in both mouse alpha and betal Fc(gamma)Rs (FRg. 3B). The human Fc(gamma)R has a transmembrane region
of 28 amino acids extending f rom residue 219 to the hydrophilic stop transfer sequence Arg (245) - Lys (246) - Lys (247) - Arg (248) (Fig. 8). This transmembrane sequence is highly homologous to the mouse betal Fc(gamma)R (50 percent amino acid homology), but shows no homology to the transmembrane sequence of the mouse a l pha Fc( gamma)R receptor (Fig. 9A,B). An in frame termination codon is found at nucleotide 1040 yielding a 75 amino acid intracytoplasmic domain. Comparison of the cytop lasmic domains of both mouse Fc(gamma)Rs with the human Fc(gamma)R shows little idsntity of either nucleotides or amino acids (Fig. 9A,B). As well as the very low level of homology observed between mouse and human Fc(gamma)R cytoplasmic domains, another clear difference between the mouse and human FcR sequences was apparent. The human FcR sequence contained an additional 117 nucleotides which result in an insertion of 39 amino acids between the two extracellular domains (Fig. 8). This sequence is absent from mouse FcRs (Fig. 3B, 9A,B) and most likely represents an intron sequence. This is inferred from the sequencing of murine genomic clones. The striking homology of this human Fc(gamma)R to both alpha and betal murine Fc(gamma)Rs in the extracel lular domain may ref lect the fact that human FcR bind mouse IgG and mouse FcR bind human Ig. The cytoplasmic domain of the human HFc3.1 FcR is totally unique and bears no resemblance to either mouse alpha, betal or beta2 intracellular domains. This difference could mean the presence of a homologous product in the mouse which has yet to be detected or may reflect the evolutionary divergence of the human and mouse proteins in a region where there may be a high rate of mutation. Partia l nucleotide sequence of HFc3.47 has a l so revealed homology with the mouse FcRs (Fig. 10). Two nonoverlapping fragments were sequenced and the first fragment (Fig. 10A) re vealed 80% nuc l eotide homo l ogy with the corresponding sequence in betal FcR (nucleotides 629-733). This sequence is present in beta2 and a similar sequence in
alpha. The second fragment shared 72% nucleic acid homology with nucleotides 959-1015 of the beta 1 FcR, this sequence also being present in the beta2 FcR but not alpha FcR. An additional variant sequence was also obtained from the THP-1 library HFc 3.0, the sequence of which is shown in Fig. 11. Like HFc 3.1, HFc 3.0 sncodes a protein highly homologous to the mouse alpha and beta FcR receptors (Fig. 12A,B). The nucleotide sequence HFc 3.0 is identical to HFc 3.1 with the exception of a large segment (nucleotides 338- 455 in HFc 3.1) between the two disulphide bonded domains which has been deleted in HFc 3.0. The protein encoded by HFc 3.0 has an extracellular ligand binding region consisting of two disulphide bonded domains each with a site of attachment for N-linked carbohydrate. In addition, the encoded protein has a 28 amino acid transmembrane region and 75 amino acid cytoplasmic tail. The extracellular region shows an overall homology of 67% identical amino acid residues and the transmembrane region has 14 of 28 amino acid identities with the mouse betal and beta2 transmembrane region (Fig. 12A.B). Expression of Human FcR mRNA: Northern blots were performed to analyse FcR expression in normal human spleen. Two mRNA transcripts were apparent after probing total mRNA from normal human spleen with the cDNA insert from pHFc 3.1 (Fig. 13). The presence of at least two hybridising mRNA species in human spleen proba.bly indicates that, like the mouse, there are multiple human FcR proteins arising from either one or more genes. DNA Analysis: Southern analysis of human genomic DNA from thymus and peripheral blood leukocytes (PBL) (Fig. 14) demonstrated that identical restriction fragments were present in thymus and PBL DNA when digested with the same restriction enzyme. This indicates that since thymocytes are mostly FcR- and PBLs mostly FcR+, that the FcR gene is not rearranged. In addition since there were only a few major hybridising restriction fragments it is likely that there is a single or few copies of a highly conserved gene in the human genome.
Since human FcR can bind mouse and human immunoglobulin and have many similarities with mouse FcR, (Dickler, 1976; Anderson and Abraham, 1980, Kulczycki et al, 1981 ; Perussia et al, 1983; Dorrington and Klein, 1983), it is likely that there is a high degree of structural and functional homology which conserved at the nucleic acid and amino acid levels. Thus we used the mouse cDNA pFc24 and a combination of oligonucleotides, probes 1.5, 1.6, 1.10 (Table 3) to screen a library constructed from mRNA isolated from human acute monocytic leukaemia cells THP-1. Several clones were isolated including HFc3.1, 3.0 and 3.47. Southern analysis of EcoRI digested DNA prepared from each of these clones showed that the mouse betal cDNA (from pFC24) hybridised to the cDNA insert of each HFc clone, i.e. HFc3.0, HFc3.47, HFc3.1. The oligonucleotide probe 1.5 hybridised to the cDNA insert of HFc3.1 and 3.0 and the oligonucleotide probe 1.6 to the cDNA insert of HFc3.47. The cDNA inserts were purified and subcloned into M13mρ8 and M13mp9 bacteriophages and sequenced by the did eoxynucleotide method according to the strategy outlined in Fig. 7a. After sequencing, these clones showed homology with the mouse Fc(gamma)R and indeed identify the Fc(gamma)R. This strategy and similar could be used to isolate the Fc(gamma)R of any species. IMPORTANCE OF DIFFERENT PARTS OF THE SEQUENCE The amino acid sequence is divided into several parts (Figs. 3B , 8 , 9 , 11, 12 ):- Leader sequence Extracellular Region Transmembrane Region Intracellular Region (Cytoplasmic Region) The Leader Sequence. The leader sequence of 29 amino acids in the betal FcR allows translocation of the nascent protein across the endoslasmic reticulum. The key point of this sequence is its hydrophobic nature (required for membrane insertion) and substitution, addition or deletion of one or more hydrophobic (non-polar) amino acids would not substantially
alter this function (see list later). Extracellular Region. The extracellular region (FCR) consists of 179 amino acids; their function is to act as the receptor for the Fc piece of Ig molecules. This binding site has not yet been identified but comments on the nature of the sequence are relevant. (a) The FcR is divided into two domains by cysteine residues, Domain 1: Cys 28 - Cys 70; Domain 2: Cys 109 - Cys 153. Both of these domains may have FcR activity as they are highly homologous. Within each domain all or most of the amino acids are likely to be involved in Ig binding as they are conserved - the two domains are conserved in man and mouse. (i) Thus when the murine sequences are compared for internal homology (i.e. domain 1 and domain 2) they are very similar, (ii) Further, when domain 1 of mouse is compared with that of man, each contain 43 amino acids, of these 24 are identical and in the identical position, of the 19 differences 8 are conservative changes in that only 1 nucleotide has been changed, and of the remaining changes, 6 of the 19 are in the same amino acid group (see below) and 13 are in different groups. Thus the whole sequence in the domain or minor variations thereof are most likely to be involved in Ig binding. The amino acids substituted belong to the same groups and would therefore not substantially alter the tertiary structure of the molecule and the groupings of amino acid are : - (i) non-polar amino acids : A , V, L, I, P, F, M, W. (ϋ) basic side chain : K, R, H (iii) acidic side chain : E, D (iv) polar side chain : G, N, Q, C, S, T, Y A, ala = alanine; C, cys = cysteine; D, asp = aspartic acid; E, glu = glutamic acid; F, phe = phenylaianine; G, gly = glycine; H, his = histidine; I, ile = isoleucine; K, lys = lysine; M, met = methionine; N, asn = asparagine; P, pro - proline; Q, gin = glutamine; R, arg = arginine; S, ser = serine; T, thr = threonine; V, val = valine; W , trp =
tryptophan; Y, tyr = tyrosine. Transmembrane Region. This consists of 28 amino acids and extends from Leu 180 - Lys 209 in mouse betal FcR. The key feature of this is the hydrophobic nature of the sequence is required as this portion interacts with the hydrophobic cell membrane and anchors the molecule in the cell membrane. Because of the hydrophobic nature, it follows that minor alterations of sequence - substitution of one non-polar amino acid by another, would not alter the essential function of the transmembrane region. It should be noted that such hydrophobic (non-polar) amino acids are alanine (A); valine (V); leucine (L); isoleucine (I); proline (P); phenylalanine (F); methionine (M) and tryptophan (W). Intracelluar Region. The intracellular region is involved in signal transmission - obtained wheπ the Fc of Ig binds to the FcR. The mode of signal transmission is unknown. A useful sequence of the FcR is described; it is likely that variations of this sequence, obtained by deletion of parts of the whole sequence, could also function in signal transmission. The region of the betal receptor that is spliced out in beta2 is important in cells expressing these molecules. Variants on the materials the subject of this specification are possible:- A. Sequence Variation The nucleotide sequences encoding the receptor can be variable:- 1. Because of the degeneracy of the genetic code nucleotide change does not necessarily bring about a change in the amino acid encoded, e.g. the codon GUU specifies a valine residue as do the codons GUC, GUA, GUG each being different by a single nucleotide. 2. Two or three nucleotide changes can give rise to the same amino acid, e.g. codons UUA, UUG, CUU, CUC, CUA, CUG all encode Leucine. Codons AGU, UCC, UCU, UCA, UCG encode serine.
3. Changing one or two nucleotides may result in a conservative amino acid change unlikely to greatly affect the function of the protein, e.g. codon UUG specifies leucine and AUU specifies isoleucine. Also UGG specifies tryphophan and UUU specifies phenylalanine - all conservative changes. 4. Allelic variations. Variations in nucleotide sequence and amino acid sequences of the encoded protein as well as resultant may occur between individual members of the same species. These variations arise from changes in the nucleotide sequences encoding the protein. Thus different forms of the same gene (called alleles) give rise to protein of slightly different amino acid sequence but still have the same function. 5. Variation can occur as the result of differential mRNA splicing where one gene composed of many different segments (exons) of coding sequence - DNA encoding the mature protein - gives rise to a RNA that is spliced such that the portion of the RNA derived from certain exons are removed. Selection of exons is different in different cell types, e.g. the betal and beta2 forms of FcR or the alpha and alpha' forms of Ly-2. 6. Proteins having the same function, e.g. immunoglobulin binding, may arise from related genes. Many protein gene families have been described, e.g. immunoglobulins which have nucleotide and amino acid sequence variation but retain their primary function of antigen binding. Such homologous proteins are encoded by homologous genes. These genes arise by duplication of one original gene or by gene conversion. 7. Variation may be intentionally introduced by:- (a) Mutating cloned cDNA or genomic DNA by point mutation, rearrangement or insertion of related or unrelated DNA into the cDNA or genomic clones encoding the functional protein. Such mutated (variant) clones can be used to generate variant proteins or peptides which in the context of this specification may have Ig binding function. (b) By enzymatic cleavage of the protein (from
sither in vitro synthesis or normal cell synthesised protein) with or without repair/rearrangement of the cleavage products. (c) By chemical modification. (d) By irradiation. B. Use of portions of the FcR protein. The present invention also includes the use of segments of the FcR protein (peptides) and variant peptides synthesised or genetically engineered that have the capacity to bind Ig. The FcR protein and its variants extend from the first methionine in the leader sequence to the most C terminal amino acid of the protein. C. Isolation of other FcR. Other FcR within and between species that are homologous at the nucleic acid, protein and functional levels. Because of substantial sequence homologies, the cDNA clones described herein would enable the isolation of related sequences encoding FcR from man, the mouse and other species.
The Principal Novelty of the Invention includes but is not limited to: (i) Description of a molecule, the FcR, which has the capacity to bind the Fc piece of Ig. (ii) The structural arrangement of the 2 extracel lular domains which show homology to each other in both man and mouse, (iii) The similarity of these domains in man and mouse. (iv) Differences in the intracallular regions in man and mouse; indicating that signals can be transmitted by different structures. (v) cDNA and other DNA and RNA material encoding for the receptor. (vi) Various vectors including materials.
Table 1. The N-terminal sequence of the Fc receptor and amino acid sequences of Fc receptor peptides.
"-" indicates an unassigned residue ( ) indicates an uncertain assignment.
Table 2. Amino Acid Sequences of lysine-C peptides of the murine Fc receptor and corresponding nucleotide sequence of oligonucleotide probes. Oligonucleotide probes were constructed on the basis of codon usage frequencies and synthesised to be complementary to mRNA.
Table 3. Oligodeoxynucleotide probes used in this study
* Sequences complementary to mRNA
** Sequences from this paper and Hibbs et al 1986
Table 4. Comparison of Immune Complex Binding and FcR mRNA synthesis
* alpha, bstal, beta2 mRNA transcripts detected by Northern analysis using specific oligonucleotide probes (Table 1).
** % EA rosetting cells detected using IgG2b monoclonal anti-TNP antibodies or rabbit IgG anti sheep erythrocytes (see Materials and Methods). ° determined by sheep anti-mouse Ig rosetting with anti-Ly-17.2 monoclonal antibody. Background levels of rosette formation were determined using an irrelevant antibody and were <5 % . These cells are also tested with 2.4G2 antibody and show identical reactions to the Ly-17.2 antibody.
NT = not tested.
+ The Pst-1 fragment of the pFc113 cDNA insert was subcloned into pKC3 and transfected into LTA-5 cells using the CaCl2 method.
References
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H.C. Proc. Natl. Acad. Sci. USA 82:7706-7710, 1985. Hogarth, P.M., Edwards J. McKenzie I.F.C, Soding J.N. and Liew F.J. (1982) J. Immol 46 135-144. Hubscher, T. and Eisen, A.H. Int. Arch. Allergy Appl. Immun. 41: 689-699, 1971. Humes , J.L., Binger , S., Ga l a v age , M., Kueh l, F.A., Wightman, P.D., Dahlgren, M.E., Davies, P. and Bonney, R.J. J. Immun. 124: 2110-2127, 1980. Hunkapillar M.W., Hewick R.M., Dreyer W.J. 9 Hoodie (1983) Methods Enzymol 91 , 399-413. Kolsch, E., Haubeck, H. and Schuler, W. In Froese, A. and Paraskevas, F. (Eds) Receptors and Ligands in Intereellular Communication , V ol . 2. Structure and Function of Fc Receptors, Marcel Dekker, New York, 1983, pp 215-231 , 1983. Kulczycki, A., Solanki, L. and Cohen, L. J. Clin. Invest. 68: 1558-1564, 1981. Kurlander, R.J., Ellison, D.M. and Hall, J. J. Immun. 133: 855-862, 1984. Leslie, R.G.Q. Eur. J. Immun. 10: 323-346, 1980. Lopez, A.F., Strath, M. and Sanderson, C.J. Immunology 48: 503-509, 1983. Maniatis, T., Fritsch, E.F. and Gambrook, J. in Molecular Cloning, A Laboratory Manual, Cold Spring Harbor Laboratory, New York, 1982. Mantorani, B. J. Immun. 115: 15-17 (1975). Maxam, A.M. and Gilbert, W. Methods in Enzymol. 65: 499-560 (1980) . Mostov, K.E., Friedlander, M. and Blobel, G. Nature 308: 37-43 (1984). Nishioka, Y. and Leder, P. J. Biol. Chem. 255: 3691-3694 (1980). Novotny, J. and Margolies, N.M. Biochem. 22: 1153-1158 (1983). Ozols, J., Gerard, C and Stachelek, C J. Biol. Chem. 252: 5986-5989 (1977). Parish, C.R. and Haywood, J.A. Proc. Roy. Soc. Lond. (Bio l.) 187: 47-63 (1974). Parish, C.R. and McKenzie, I.F.C. J. Immunol. Methods 20:
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Williams, A.F. and Gagnon, J. Science 216: 696-703 (1982). Yαdoi, J. and Ishizaka, K. J. Immun. 124: 1322-1329 (1980). A deposit of the material referred to herein as pFc24, pFc113, HFc3.0, HFc3.1 and HFc 3.47 was made with ATCC on or about 29th M ay, 1987 and with Dr. George Hodges of the Cancer Instituts (also known as the Peter McCallum Clinic) αf 481 Litt l e Lonsda l e Street, M e l bourne , V ictoria , Australia under terms and conditions permitting access to members of the public.
RECEIPT
I, Dr. George Hodgson, of the Cancer Institute, (also known as the Peter MacCallum Clinic) of 481 Little Lonsdale Street, Melbourne, Victoria, Australia, have received on 29th May, 1987 a deposit of material identified as HFc 3.0, HFc 3.1 and HFc 3.47 and pFc24 and pFcll3 from Professor Ian McKenzie of the University of Melbourne in connection with an about to be filed PCT Patent Application based on Australian Patent Application No. PH 6166 filed 29 May, 1986.
I agree to keep and maintain that material and to make it available to the Public under terms and conditions no more onerous than are required under the Budapest Treaty or the terms of the ATCC in circumstances in which material needs to be made available to the public in consequence of or in support of the filing of a Patent Application.
Dated..........29-5-87..........
Claims
1. A receptor for the Fc portion of immunogobulin and being derived from ATCC , ATCC or ATCC
2. A receptor for the Fc portion of immunogobulin, the receptor exhibiting the ability to bind to the Fc portion of mouse and human immunogobulin.
3. A receptor as claimed in claim 2, and exhibiting an ability to bind to antibodies and immune complexes.
4. A receptor as claimed in claim 2, and having a size of 40-70 kilodaltons.
5. A receptor as claimed in claim 2, and formed from mRNA of a size of about 1.8, about 2.0, about 1.9, about 1.4 or about 2.4 kilobases.
6. A receptor as claimed in claim 2 comprising about 280 to 301 amino acids including two substantially regularly spaced pairs of Cys residues, two or four potential N-linked glycosylation sites.
7. A receptor for the Fc portion of immunogobulin and having at least 40%, more preferably at least 50% and still more preferably at least 60% homology with the receptor of claim 1 or claim 2.
8. A receptor for the Fc portion of immunogobulin and including the amino acid sequences:-
(a) met leu leu trp thr ala val leu asn leu ala ala gly thr his asp leu pro lys ala val val lys leu glu pro pro trp ile,
(b) glu gin thr arg leu ser asp pro val asp leu gly val ile, and
(c) lys gly ser leu gly arg thr leu his gin ser lys pro val thr ile thr val gin gly pro lys, and
(d) glu ala glu asn thr ile thr tyr ser leu leu lys his pro glu ala leu asp glu glu thr glu his.
9. A receptor for the Fc portion of immunogobulin and including the amino acid sequence:-
Met Glu Ser Asn Trp Thr Val His Val Phe Ser Arg Thr Leu Cys His Met Leu Leu Trp Thr Ala Val Leu Asn Leu Ala Ala Gly.
10. A receptor for the Fc portion of immunogobulin and including the amino acid sequence:- Cys Glu Gly Thr His Asn Pro Gly Asn Ser Ser Thr Gin Trp Phe His Asn Gly Arg Ser lle Arg Ser Gin Val Gin Ala Ser Tyr Thr Phe Lys Ala Thr Val Asn Asp Ser Gly Glu Tyr Arg Cys.
11. A receptor far the Fc portion of immunogobulin and including the amino acid sequence:-
Cys His Ser Trp Arg Asn Lys Leu Leu Asn Arg Ile Ser Phe Phe His Asn Glu Lys Ser Val Arg Tyr His His Tyr Ser Ser Asn Phe Ser Ile Pro Lys Ala Asn His Ser His Ser Gly Asp Tyr Tyr Cy s.
12. A receptor for the Fc portion of immunogobulin and including the amino acid sequence:-
Leu Pro Val Leu Thr Ile Val Ala Ala Val Thr Gly Ile Ala Val Ala Ala Ile Val Ile Ile Leu Val Ser Leu Val Tyr Leu.
13. A receptor for the Fc portion of immunogobulin and including the amino acid sequence:-
Lys Lys Lys Gin Val Pro Ala Leu Pro Gly Asn Pro Asp His A r g G l u M e t G l y G l u T h r L e u P r o G l u G l u V a l G l y G l u T y r A r g Gin Pro Ser Gly Gly Ser Val Pro Val Ser Pro Gly Pro Pro Ser Gly Leu Glu Pro Thr Ser Ser Ser Pro Tyr Asn Pro Pro Asp Leu Glu Glu Ala Pro Lys Thr Glu Ala Glu Asn Thr Ile Thr Tyr Ser Leu Leu Lys His Pro Glu Ala Leu Asp Glu Glu Thr Glu His Asp Tyr Gin Asn His Ile.
14. A receptor for the Fc portion of immunogobulin and including the amino acid sequence:-
N S G P R N L W L L Q P L T V L L L L A S A D S Q A A.
15. A receptor for the Fc portion of immunogobulin dnd including the amino acid sequence:-
C Q G A R S P E S D S I Q W F H N G N L I P T H T Q P S Y R F K A N N N D S G E Y T C
16. A receptor for the Fc portion of immunogobulin and including the amino acid sequence:-
C H S W K D K P L V K V T F F Q N G K S Q K F S R L D P T F S I P Q A N H S H S G D Y H C.
17. A receptor for the Fc portion of immunogobulin and including the amino acid sequence:-
S P M G I I V A V V I A T A V A A I V A A V V A L I Y C.
18. A receptor for the Fc portion of immunogobulin and including the amino acid sequence:-
R K K R I S A N S T D P V K A A Q F E P P G R Q M I A I R K R Q L E E T N N D Y E T A D G G Y M T L N P R A P T D D K N I Y L T L P P N D H V N S N N.
19. A nucleotide sequence, gene, cDNA clone, or a vector for same adapted to encode or to produce a material adapted to encode for the receptor of any preceding claim or a fragment thereof.
20. A nucleotide sequence, gene, cONA clone, or a vector for same adapted to encode or produce a material adapted to encode for the leader sequence, extracellular region, transmembrane region or intracellular region of the receptor of any one of claims 1-18.
21. A cDNA clone, gene or nucleotide sequence being incorporated in ATCC ,ATCC or ATCC and capable of encoding for a receptor for the Fc portion of immunogobulin or a fragment thereof.
22. A material being ATCC , ATCC , or ATCC
23. A nucleotide sequence, cDNA clone, gene or vector containing same and capable of encoding for a receptor for the Fc portion of immunogobulin and including the nucleotide sequences:-
(a) ATG CTA CTG TGG ACA GCC GTG CTA AAT CTT GCT GCT GGG ACT CAT GAT CTT CCA AAG GCT GTG GTC AAA CTC GAG CCC CCG TGG ATC,
(b) GAG CAG ACC CGC CTC AGC GAC CCT GTA GAT CTG GGA GIG ATT,
(c) AAA GGA AGT CTA GGA AGG ACA CTG CAC CAG TCC AAG CCT GTC ACC ATC ACT GTC CAA GGG CCC AAG, and
(d) GAG GCT GAG AAC ACG ATC ACC TAC TCA CTC CTC AAG CAT CCC GAA GCC TTG GAT GAA GAA ACA GAG CAT.
24. A nucleotide sequence, cDNA clone, gene or vector containing same and capable of encoding for a receptor for the Fc portion of immunogobulin and having the nucleotide sequence:-
ATG GAG AGC AAC TGG ACT GTC CAT GTG TTC TCA CGG ACT TTG TGC CAT ATG CTA CTG TGG ACA GCC GTG CTA AAT CTT GCT GCT GGG.
25. A nucleotide sequence, cDNA clone, gene or vector containing same and capable of encoding for a receptor for the Fc portion of immunogobulin and having the nucleotide sequence:-
TGC GAA GGG ACC CAC AAC CCT GGG AAC TCT TCT ACC CAG TGG TTC CAC AAT GGG AGG TCC ATC CGG AGC CAG GTC CAA GCC AGC TAC ACG TTT AAG GCC ACA GTC AAT GAC AGT GGA GAA TAT CGG TGT.
26. A nucleotide sequence, cDNA clone, gene or vector containing same and capable of encoding for a receptor for the Fc portion of immunogobulin and having the nucleotide sequence:-
TGC CAT AGC TGG AGG AAC AAA CTA CTG AAC AGG ATC TCG TTC TTC CAT AAT GAA AAA TCC GTG AGG TAT CAT CAC TAC AGT AGT AAT TTC TCT ATC CCC AAA GCC AAC CAC AGT CAC AGT GGG GAC TAC TAC TGC.
27. A nucleotide sequence, cDNA clone, gene or vector containing same and capable of encoding for a receptor for the Fc portion of immunogobulin and having the nucleotide sequence:-
TTA CCA GTA TTG ACA ATT GTG GCT GCT GTC ACT GGG ATT GCT GTC GCA GCC ATT GTT ATT ATC CTA GTA TCC TTG GTC TAT CTC
28. A nucleotide sequence, cDNA clone, gene or vector containing same and capable of encoding for a receptor for the Fc portion of immunogobulin and having the nucleotide sequence:-
AAG AAA AAG CAG GTT CCA GCT CTC CCA GGA AAC CCT GAT CAC AGG GAA ATG GGA GAA ACC CTT CCA GAG GAA GTA GGT GAG TAC AGA CAG CCC TCT GGG GGC TCA GTG CCT GTC AGC CCA GGG CCT CCA TCT GGA CTG GAG CCA ACA AGC AGC AGC CCA TAC AAT CCT CCT GAT CTG GAA GAA GCT CCC AAA ACT GAG GCT GAG AAC ACG ATC ACC TAC TCA CTC CTC AAG CAT CCC GAA GCC TTG GAT GAA GAA ACA GAG CAT GAT TAC CAA AAC CAC ATT TAG.
29. A nucleotide sequnce, cDNA clone, gene or vector containing same and capable of encoding for a receptor for the Fc portion of immunogobulin and having the nucleotide sequence:-
AAT TCC GGT CCC AGA AAC CTG TGG CTG CTT CAA CCA TTG ACA GTT TTG CTG CTG CTG GCT TCT GCA GAC AGT CAA GCT GCA.
30. A nucleotide sequnce, cDNA clone, gene or vector containing same and capable of encoding for a receptor for the Fc portion of immunogobulin and having the nucleotide sequence:-
TGC CAG GGG GCT CGC AGC CCT GAG AGC GAC TCC ATT CAG TGG TTC CAC AAT GGG AAT CTC ATT CCC ACC CAC ACG CAG CCC AGC TAC AGG TTC AAG GCC AAC AAC AAT GAC AGC GGG GAG TAC ACG TGC.
31. A nucleotide sequnce, cDNA clone, gene or vector containing same and capable of encoding for a receptor for the Fc portion of immunogobulin and having the nucleotide sequence:-
TGC CAC AGC TGG AAG GAC AAG CCT CTG GTC AAG GTC ACA TTC TTC CAG AAT GGA AAA TCC CAG AAA TTC TCC CGT TTG GAT CCC ACC TTC TCC ATC CCA CAA GCA AAC CAC AGT CAC AGT GGT GAT TAC CAC TGC
32. A nucleotide sequnce, cDNA clone, gene or vector containing same and capable of encoding for a receptor for the Fc portion of immunogobulin and having the nucleotide sequence:-
TCA CCA ATG GGG ATC ATT GTG GCT GTG GTC ATT GCG ACT GCT GTA GCA GCC ATT GTT GCT GCT GTA GTG GCC TTG ATC TAC TGC.
33. A nucleotide sequnce, cDNA clone, gene or vector containing same and capable of encoding for a receptor for the Fc portion of immunogobulin and having the nucleotide s equence:-
AGG AAA AAG CGG ATT TCA GCC AAT TCC ACT GAT CCT GTG AAG GCT GCC CAA TTT GAG CCA CCT GGA CGT CAA ATG ATT GCC ATC AGA AAG AGA CAA CTT GAA GAA ACC AAC AAT GAC TAT GAA ACA GCT GAC GGC GGC TAC ATG ACT CTG AAC CCC AGG GCA CCT ACT GAC GAT AAA AAC ATC TAC CTG ACT CTT CCT CCC AAC GAC CAT GTC AAC AGT AAT AAC TAA.
34. A receptor for the Fc portion of immunogobulin having the amino acid sequence set out in any one of the accompanying drawings or so much thereof being a receptor for the Fc portion of immunogobulin.
35. A receptor for the Fc portion of immunogobulin as claimed in any one of claims 1-18 and 34 and modifisd by deletion, addition or substitution of amino acids or by chemical or irradiation modification not substantially deleteriously affecting the ability to bind to the Fc portion of immunogobulin.
36. A nucleotide sequence, gene, cDNA clone, or a vector for same having the nucleotide sequence set out in any one of the accompanying drawings or so much thereof being adapted to encode for a receptor for the Fc portion of immunogobulin or a fragment thereof.
37. A nucleotide sequence, gene, cDNA clone, or a vector for same as claimed in any one of claims 19-33 and 36 and modified by deletion, addition or substitution of nucleotides or by chemical or irradiation modification not substantially deleteriously affecting the ability to code for a receptor for the Fc portion of immunogobulin or a fragment thereof.
38. A receptor for the Fc portion of immunogobulin and being derived from pFc24, pFc113, Hc3.0, Hc3.1 or Hc3.47.
39. A material being pFc24, pFc113, Hc3.0, Hc3.1 or Hc3.47.
40. A cDNA clone, gene or nucleotide sequence being incorporated in pFc24, pFc113, Hc3.0, Hc3.1 or Hc3.47 and capable of encoding for a receptor for the Fc portion of immunogobulin or a fragment thereof.
Priority Applications (3)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
DE3751996T DE3751996T2 (en) | 1986-05-29 | 1987-05-29 | Polynucleotide sequences coding for the human FC RECEPTOR FOR IMMUNOGLOBULIN |
EP87903479A EP0268636B1 (en) | 1986-05-29 | 1987-05-29 | Polynucleotide sequences encoding the human FC RECEPTOR FOR IMMUNOGLOBULIN |
HK98106183A HK1006977A1 (en) | 1986-05-29 | 1998-06-23 | Polynucleotide sequences encoding the human fc receptor for immunoglobulin |
Applications Claiming Priority (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
AUPH6166 | 1986-05-29 | ||
AUPH616686 | 1986-05-29 |
Publications (1)
Publication Number | Publication Date |
---|---|
WO1987007277A1 true WO1987007277A1 (en) | 1987-12-03 |
Family
ID=3771638
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
PCT/AU1987/000159 WO1987007277A1 (en) | 1986-05-29 | 1987-05-29 | Fc receptor for immunoglobulin |
Country Status (9)
Country | Link |
---|---|
EP (1) | EP0268636B1 (en) |
JP (1) | JP2713410B2 (en) |
AT (1) | ATE147432T1 (en) |
AU (1) | AU595623B2 (en) |
CA (1) | CA1340935C (en) |
DE (1) | DE3751996T2 (en) |
HK (1) | HK1006977A1 (en) |
NZ (1) | NZ220504A (en) |
WO (1) | WO1987007277A1 (en) |
Cited By (5)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
EP0319307A2 (en) * | 1987-12-04 | 1989-06-07 | Schering Biotech Corporation | Human Fc-gamma receptor |
EP0343950A2 (en) * | 1988-05-27 | 1989-11-29 | Schering Biotech Corporation | Human receptor Fc(gamma)RIII |
WO1996008512A1 (en) * | 1994-09-16 | 1996-03-21 | Austin Research Institute Cancer And Anti-Inflammatory Syndicate No. 1 | POLYPEPTIDES WITH Fc BINDING ABILITY |
US5767077A (en) * | 1988-05-27 | 1998-06-16 | Applied Research Systems Ars Holding N.V. | Human Fc-γ receptor III |
US7973136B2 (en) | 2005-10-06 | 2011-07-05 | Xencor, Inc. | Optimized anti-CD30 antibodies |
Families Citing this family (22)
Publication number | Priority date | Publication date | Assignee | Title |
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WO1991006570A1 (en) * | 1989-10-25 | 1991-05-16 | The University Of Melbourne | HYBRID Fc RECEPTOR MOLECULES |
US8093357B2 (en) | 2002-03-01 | 2012-01-10 | Xencor, Inc. | Optimized Fc variants and methods for their generation |
US7317091B2 (en) | 2002-03-01 | 2008-01-08 | Xencor, Inc. | Optimized Fc variants |
US8188231B2 (en) | 2002-09-27 | 2012-05-29 | Xencor, Inc. | Optimized FC variants |
US20040132101A1 (en) | 2002-09-27 | 2004-07-08 | Xencor | Optimized Fc variants and methods for their generation |
US20090010920A1 (en) | 2003-03-03 | 2009-01-08 | Xencor, Inc. | Fc Variants Having Decreased Affinity for FcyRIIb |
US8388955B2 (en) | 2003-03-03 | 2013-03-05 | Xencor, Inc. | Fc variants |
US8084582B2 (en) | 2003-03-03 | 2011-12-27 | Xencor, Inc. | Optimized anti-CD20 monoclonal antibodies having Fc variants |
US9051373B2 (en) | 2003-05-02 | 2015-06-09 | Xencor, Inc. | Optimized Fc variants |
US8101720B2 (en) | 2004-10-21 | 2012-01-24 | Xencor, Inc. | Immunoglobulin insertions, deletions and substitutions |
US9714282B2 (en) | 2003-09-26 | 2017-07-25 | Xencor, Inc. | Optimized Fc variants and methods for their generation |
US20150010550A1 (en) | 2004-07-15 | 2015-01-08 | Xencor, Inc. | OPTIMIZED Fc VARIANTS |
US8802820B2 (en) | 2004-11-12 | 2014-08-12 | Xencor, Inc. | Fc variants with altered binding to FcRn |
US8367805B2 (en) | 2004-11-12 | 2013-02-05 | Xencor, Inc. | Fc variants with altered binding to FcRn |
US8546543B2 (en) | 2004-11-12 | 2013-10-01 | Xencor, Inc. | Fc variants that extend antibody half-life |
AU2005304624B2 (en) | 2004-11-12 | 2010-10-07 | Xencor, Inc. | Fc variants with altered binding to FcRn |
DK1931709T3 (en) | 2005-10-03 | 2017-03-13 | Xencor Inc | FC VARIETIES WITH OPTIMIZED FC RECEPTOR BINDING PROPERTIES |
PL2059536T3 (en) | 2006-08-14 | 2014-07-31 | Xencor Inc | Optimized antibodies that target cd19 |
CA2660795C (en) | 2006-09-18 | 2014-11-18 | Xencor, Inc. | Optimized antibodies that target hm1.24 |
EP4269443A3 (en) | 2007-12-26 | 2023-12-27 | Xencor, Inc. | Fc variants with altered binding to fcrn |
US9493578B2 (en) | 2009-09-02 | 2016-11-15 | Xencor, Inc. | Compositions and methods for simultaneous bivalent and monovalent co-engagement of antigens |
US8362210B2 (en) | 2010-01-19 | 2013-01-29 | Xencor, Inc. | Antibody variants with enhanced complement activity |
Citations (1)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
EP0131142A2 (en) * | 1983-06-22 | 1985-01-16 | Pharmacia Ab | Process for recovering a cell wall protein |
-
1987
- 1987-05-29 WO PCT/AU1987/000159 patent/WO1987007277A1/en active IP Right Grant
- 1987-05-29 AU AU74881/87A patent/AU595623B2/en not_active Expired
- 1987-05-29 NZ NZ220504A patent/NZ220504A/en unknown
- 1987-05-29 EP EP87903479A patent/EP0268636B1/en not_active Expired - Lifetime
- 1987-05-29 JP JP62503462A patent/JP2713410B2/en not_active Expired - Lifetime
- 1987-05-29 CA CA000538363A patent/CA1340935C/en not_active Expired - Lifetime
- 1987-05-29 AT AT87903479T patent/ATE147432T1/en not_active IP Right Cessation
- 1987-05-29 DE DE3751996T patent/DE3751996T2/en not_active Expired - Lifetime
-
1998
- 1998-06-23 HK HK98106183A patent/HK1006977A1/en not_active IP Right Cessation
Patent Citations (1)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
EP0131142A2 (en) * | 1983-06-22 | 1985-01-16 | Pharmacia Ab | Process for recovering a cell wall protein |
Non-Patent Citations (6)
Title |
---|
CHEMICAL ABSTRACTS, Volume 104, No 19, issued 1986, May 12 (Columbus, Ohio, USA), G. GORINI et al "Analysis of Membrane Glycoproteins Binding to Immunocomplexes", see page 507, column 1, Abstract No 166585K Biochem. Soc. Trans., 1986 14(1), 74-5 (Eng) * |
CHEMICAL ABSTRACTS, Volume 104, No 3, issued 1986, January 20 (Columbus, Ohio, USA), M. VAUGHN et al, "Characterization of Human IgG Fc Receptors" see page 384 column 2, Abstract No 18431s, J. Immunol, 1985 135(6), 4059-65 (Eng) * |
Folia Microbiologica, Volume 29, No 6, issued 1984 (Prague, Czechoslovakia), L FORNUSEK and V VETVICKA, "Fc Receptors - More Answers, More Questions", see pages 476-516. * |
Nature, Volume 324, No 6095, issued 1986, November 27 (London) V.A. LEWIS et al, "A Complementary DNA Clone for a Macrophage-Lymphocyte Fc Receptor", see pages 372-375. * |
Proceedings of the National Acadamy of Sciences, USA Volume 83, No 18, issued 1986 September (Washington D.C., USA), M.L. HIBBS et al, "The Murine Fc Receptor for Immunoglobulin: Purification, Partial Amino Acid Sequence, and Isolation of cDNA Clones", see pages 6980-6984. * |
Science, Volume 234, No 4777, issued 1986, November 7 (Washington D.C., USA) J.V. RAVETCH et al, "Structural Heterogeneity and Functional Domains of Murine Immunoglobulin G Fc Receptors", see pages 718-725. * |
Cited By (13)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
EP0319307A2 (en) * | 1987-12-04 | 1989-06-07 | Schering Biotech Corporation | Human Fc-gamma receptor |
WO1989005351A2 (en) * | 1987-12-04 | 1989-06-15 | Schering Biotech Corporation | Human fc-gamma receptor |
WO1989005351A3 (en) * | 1987-12-04 | 1989-08-10 | Schering Biotech Corp | Human fc-gamma receptor |
EP0319307A3 (en) * | 1987-12-04 | 1989-08-30 | Schering Biotech Corporation | Human fc-gamma receptor |
EP0343950A3 (en) * | 1988-05-27 | 1991-07-10 | Schering Biotech Corporation | Human receptor Fc(gamma)RIII |
WO1989011490A1 (en) * | 1988-05-27 | 1989-11-30 | Schering Biotech Corporation | HUMAN Fcgamma RECEPTOR III |
EP0343950A2 (en) * | 1988-05-27 | 1989-11-29 | Schering Biotech Corporation | Human receptor Fc(gamma)RIII |
US5767077A (en) * | 1988-05-27 | 1998-06-16 | Applied Research Systems Ars Holding N.V. | Human Fc-γ receptor III |
US5976831A (en) * | 1988-05-27 | 1999-11-02 | Applied Research Systems Ars Holding, N.V. | Human FCγ receptor III |
US6294347B1 (en) | 1988-05-27 | 2001-09-25 | Applied Research Systems Ars Holding N.V. | Human FCγ receptor III |
WO1996008512A1 (en) * | 1994-09-16 | 1996-03-21 | Austin Research Institute Cancer And Anti-Inflammatory Syndicate No. 1 | POLYPEPTIDES WITH Fc BINDING ABILITY |
US7973136B2 (en) | 2005-10-06 | 2011-07-05 | Xencor, Inc. | Optimized anti-CD30 antibodies |
US9574006B2 (en) | 2005-10-06 | 2017-02-21 | Xencor, Inc. | Optimized anti-CD30 antibodies |
Also Published As
Publication number | Publication date |
---|---|
EP0268636A4 (en) | 1988-09-28 |
AU595623B2 (en) | 1990-04-05 |
DE3751996T2 (en) | 1997-07-03 |
ATE147432T1 (en) | 1997-01-15 |
NZ220504A (en) | 1991-09-25 |
EP0268636A1 (en) | 1988-06-01 |
JPS63503386A (en) | 1988-12-08 |
AU7488187A (en) | 1987-12-22 |
EP0268636B1 (en) | 1997-01-08 |
DE3751996D1 (en) | 1997-02-20 |
JP2713410B2 (en) | 1998-02-16 |
HK1006977A1 (en) | 1999-03-26 |
CA1340935C (en) | 2000-03-28 |
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