US12106204B2 - Adaptive brain-computer interface decoding method based on multi-model dynamic integration - Google Patents
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Definitions
- the present invention relates to the field of motor neural signal decoding, in particular to an adaptive brain-computer interface decoding method based on multi-model dynamic ensemble.
- Brain-computer interfaces directly decode motion intentions from neural signals for external device control.
- Intracortical brain-computer interfaces use neural signals recorded by implanted electrode arrays to extract motion-related information.
- Advances in the intracortical brain-computer interfaces have led to the significant development of exoskeleton devices and computer cursor control.
- neural decoding algorithms play an important role.
- Scholars have proposed many algorithms to decode motion information from the neural signals, including population vector methods, optimal linear estimation methods, deep neural networks, and recursive Bayesian decoders.
- the Kalman filter combines the evolution process of a trajectory as prior knowledge to make prediction more accurate, so it is widely used in online cursor control and exoskeleton control, achieving a best performance so far.
- Chinese patent document with publication number CN107669416A discloses a wheelchair system and control method based on continuous-brisk motor imagery neural decoding, comprising an electroencephalogram signal acquisition system, a decoding device and an electric wheelchair connected in sequence; the decoding device comprises a continuous motor imagery electroencephalogram signal processing module and a brisk motor imagery electroencephalogram signal processing module that are arranged in series, where the two modules are respectively used to decode the continuous motor imagery electroencephalogram signal and the brisk motor imagery electroencephalogram signal transmitted by the electroencephalogram signal acquisition system.
- the unstability of the neural signals is a great challenge in the neural decoding process.
- Most of the neural decoders used in current intracortical brain-computer interfaces assume a stable functional relationship between the neural signals and kinematics, and therefore use a fixed decoding model.
- signals generated by neurons occasionally introduce noise or disappear altogether; at the same time, because of the plasticity of the neurons, brain activity may also change over time.
- a neural signal-to-kinematic mapping function may be unstable and change continuously over time.
- a fixed decoding function can lead to an unstable and inaccurate decoding result, so it needs to be retrained every time period to maintain a certain performance.
- Decoders proposed for coping with neural variabilities can be classified into two categories.
- the first category of the decoders which are the most common decoders today, still uses fixed models, relying on periodic retraining or incrementally updating model parameters online to maintain performance.
- the second category of the decoders uses dynamic models to track the changes in the neural signals, which can avoid the cost of retraining and are more suitable for long-term decoding tasks.
- few studies in such methods dare to directly model unstable neural signals.
- the present invention provides an adaptive brain-computer interface decoding method based on multi-model dynamic ensemble, which can greatly reduce the influence of unstability of the neural signals on decoding performance and improve the robustness of a decoder.
- An adaptive brain-computer interface decoding method based on multi-model dynamic ensemble where the method comprises the following steps:
- the observation function in a Kalman filter is improved and replaced with a pool of models that can be dynamically assembled online, so as to better adapt to the changes of the neural signals.
- these models are automatically selected and combined according to the Bayesian update mechanism, thereby greatly reducing the influence of the unstability of the neural signals on the decoding performance and improving the robustness of the decoder.
- step (1) the specific process of the pre-processing is as follows:
- the data in paradigm preparation and return phases can be removed, and an actual operation phase can be selected for analysis.
- a z-score function and a filter function can be used to normalize and smooth each dimension of the motion signal, and smooth the firing rate of each neuron of the neural signal.
- the specific smoothing coefficients can be selected according to actual needs.
- the Bayesian update mechanism is as follows:
- y 0:k ) is the posterior probability of selecting the m-th model; M represents the number of the candidate models.
- the Bayesian formula can be used to calculate the posterior probability of selecting the m-th model at the moment k.
- the formula thereof is as follows:
- p( M
- y 0:k-1 ) is a priorprior probability of selecting the m-th model
- y 0:k-1 ) is a marginal likelihood of selecting the m-th model
- a forgetting factor ⁇ can be determined to retain part of the historical information, that is, the prior probability of selecting the m-th model at the current moment is influenced by the posterior probability of selecting the m-th model at the previous moment.
- the priorprior probability of selecting the m-th model is calculated as follows:
- p( m
- y 0:k-1 ) is the probability of selecting the m-th model at the k-1-th moment; a (0 ⁇ 1) is a forgetting factor.
- the calculation method of the marginal likelihood of selecting the m-th model is as follows: p m ( y k
- y 0:k-1 ) ⁇ p m ( y k
- x k ) is a likelihood function for the m-th model.
- step (4) adopting a particle filter algorithm for the state estimation, and calculating p(x k
- the present invention proposes a multi-model dynamic ensemble method applied to the neural signal decoding, which reduces the influence caused by the unstability of the neural signal to a certain extent. It outperforms the well-known Kalman filter algorithm in the test, proving the effectiveness of the method.
- FIG. 1 is a schematic figure of a multi-model dynamic ensemble process in the method of the present invention
- FIG. 2 is a comparison chart of the success rate of a Kalman filter and multi-model dynamic ensemble for five consecutive days in an online cursor control experiment in an embodiment of the present invention
- FIG. 3 is a trajectory comparison figure of a Kalman filter and multi-model dynamic ensemble in an online cursor control experiment on Dec. 14, 2020, according to an embodiment of the present invention.
- Two 96-channel Utah intracortical microelectrode arrays (4 mm ⁇ 4 mm, 1.4 mm long Utah arrays, Blackrock Microsystems, Salt Lake City, Utah, USA) were implanted in the left primary motor cortex of the volunteer, and the other was located in the central hand knob area 2 mm away. Electron Computed Tomography and functional MRI were used to guide the implantation. During the implantation, the participant was asked to perform flexion and extension motions of the elbow, and the scanning of the functional MRI was used to confirm an activation area in the motor cortex. The operation used a robotic arm to assist in implanting electrodes during the surgery. The participant had a week of rehabilitation before starting the neural signal recording and BCI training tasks.
- the participant performed the BCI training tasks each weekday and rested on weekends.
- the training time was approximately 3 hours per day and comprised of preparation for signal recording, impedance testing, spike classification and paradigm tasks.
- the experiment was stopped once the participant felt tired or developed physical abnormalities, such as a fever or a urinary tract infection. The entire experiment lasted half a year, recording the neural signals for 12 weeks.
- a 2D cursor control task was performed on a computer monitor 1.5 m in front of the volunteer.
- the task contained eight targets at the top, bottom, left, right and four corners of the screen.
- the targets can be displayed sequentially in a clockwise or pseudo-random fashion.
- the relevant parameters of the task can be configured in task settings, comprising a distance from the target to the center of the screen, the diameter of a target ball, the maximum trial time, an arrival threshold, the minimum dwell time and the number of repetitions after failure.
- the volunteer was asked to control a blue cursor ball from the center of the screen to a red target ball.
- the distance between the centers of the blue and red balls should be less than a preset arrival threshold, and dwell time should not be shorter than a preset dwell time.
- the maximum duration of each trial is set from 2 to 5 seconds. An audible cue is given at the end of the trial to indicate its success. A maximum of 4 attempts were made after each trial failed.
- the default setting was to display the target balls at 15 cm from the center of the screen, with a diameter of 5 cm.
- Step 1 motor neural signal pre-processing: obtaining an original motor neural signal recorded from the electrodes, selecting an appropriate window size to calculate the firing rate of the neural signal, intercepting a valid data segment according to a state label, normalizing and smoothing the data, and obtaining the pre-processed motor neural signal; dividing the data into a training set, a validation set, and a test set according to a proper proportion;
- the experiment recorded the neural signals by using a Neuroport system (NSP, Blackrock Microsystems).
- the neural activity is amplified, digitized, and recorded at 30 KHz.
- Thresholds for neural action potential detection were set from ⁇ 6.5 RMS to ⁇ 5.5 RMS for each high-pass filtered (250 Hz cutoff frequency) electrode by using a Central software package (Blackrock Microsystem).
- the researchers manually sort the spikes, which takes about 25 to 35 minutes.
- a peak activity was converted to firing rate in 20 ms and low-pass filtered by using an exponential smoothing function with a 450 ms window.
- Step 2 a state-space model based on the dynamic ensemble:
- An improved observation model varying a traditional state-space model, using a set of functions (i.e., candidate models) instead of a fixed function to dynamically characterize the relationship between observation variables and state variables;
- k represents a discrete time step
- x k ⁇ R d x represents the state that is concerned about
- y k ⁇ R d y represents the observation variable
- v k , n k represents a state transition noise and an observation noise which are independent and identically distributed.
- states and observations represent motion trajectories and neural signals, respectively.
- the task of the neural decoding is to iteratively estimate the probability density of x k .
- the Kalman filter can provide an analytically optimal solution when both the neural signal and the motion signal conform to a linear Gaussian assumption.
- the observation function h( ⁇ ) of the traditional state-space model is determined in advance and cannot adapt to changing neural signals.
- the observation model in step 2 improves upon it by allowing the observation function to be adjusted online.
- k represents a discrete time step
- x k ⁇ R d x represents a state of interest
- y k ⁇ R d y represents the observation variable
- n k represents an independent and identically distributed observation noise
- ⁇ 1, 2, . . . , M ⁇ represents a model index in the observation equation.
- M ⁇ represents a model index in the observation equation.
- m represents the model in action at the moment k is h m .
- the models in a model set can convert input kinematic parameters x t into the neural signals y t .
- the multi-model dynamic ensemble method we learn a pool of forms of encoding models, such as linear functions, polynomial functions, and neural networks, to enhance the ensemble effectiveness of online models.
- Past research has demonstrated an excellent decoding ability of linear models, while non-linear models have strong robustness in the presence of noise.
- the multi-model dynamic ensemble method demonstrates the advantages of different models to deal with unstable neural signals.
- the model pool of this example contains four models.
- the third model H nn1 ( ⁇ ) and the fourth model H nn2 ( ⁇ ) are two neural networks with different parameter sizes. Both the neural networks contain one hidden layer.
- the number of neurons in the input layer is equal to the dimensions of the motion parameters x t
- the number of neurons in the output layer is equal to the dimensions of the neural signal y t .
- the number of neurons in the hidden layers are 30 and 50, respectively.
- H l ( ⁇ ) and H p ( ⁇ ) the parameters are estimated by using the least square method.
- H nn1 ( ⁇ ) and H nn2 ( ⁇ ) the parameters are optimized by using the Adam algorithm, a learning rate is set to 0.01, and a weight decay is set to 1e-4.
- an early-stopping method is adopted to alleviate the overfitting problem.
- step 2 a set of candidate models are used to characterize the functional relationship between the observation signal and the state to be predicted.
- the Bayesian update mechanism dynamically selects dominant models among these models in a data-driven manner. Given an observation sequence y 0:k , the posterior probability of the state at the moment k is: p ( x k
- the Bayesian formula can be used to calculate the posterior probability of selecting the m-th model at the moment k.
- p( m
- y 0:k-1 ) is a priorprior probability of selecting the m-th model
- y 0:k-1 ) is a marginal likelihood of selecting the m-th model
- a forgetting factor ⁇ can be determined to retain part of the historical information, that is, the prior probability of selecting the m-th model at the current moment is influenced by the posterior probability of selecting the m-th model at the previous moment:
- p( m
- y 0:k-1 ) is the probability of selecting the m-th model at the k-1-th moment; ⁇ (0 ⁇ 1) is a forgetting factor.
- the forgetting factor is set from 0.1 to 0.9.
- the influence of the previous kinematic state is considered to a great extent, so the decoded kinematic state is smoother.
- the calculation method of the marginal likelihood of selecting the m-th model is as follows: p m ( y k
- y 0:k-1 ) ⁇ p m ( y k
- x k ) is a likelihood function for the m-th model.
- Step 3 candidate model learning and state estimation: using the training set and the validation set to obtain a set of different candidate models;
- estimating the kinematic state for each candidate model by using a weighted particle set at each time step, and calculating p(x k
- m, y 0:k ) based on the particle filtering.
- x k i is obtained from the state transition prior p(x k
- x k-1 i ),i 1, . . . , N S , and then according to the principle of importance sampling, we can get: p ( x k
- ⁇ m,k i ⁇ k-1 i p m (y k
- ⁇ m,k i represents the normalized importance weight of the i-th particle when the m-th model is selected.
- the training set is used as the particle set to avoid the unstability caused by randomly scattering the particles.
- p( m
- y 0:k ) based on the particle filtering.
- the posterior probability p m (y k m
- y 0:k-1 ), m 1, . . . , M is known.
- the state transition prior is used as the importance function, i.e., q(x k
- x k-1 , y 0:k ) p(x k
- the distribution of x k can be approximated by the particles, i.e, p(x k
- y 0:k-1 ) ⁇ i 1 i ⁇ x k i . Further, we get: p m ( y k
- y 0:k-1 ) ⁇ i 1 N s ⁇ k-1 i p m ( y k
- the particle filtering usually suffers from particle degradation, and after a few iterations, only a small number of particles have high weights. Therefore, we adopt a resampling method to remove particles with too small or too large weights to alleviate the particle degradation problem.
- Step 4 performance evaluation of the multi-model dynamic ensemble method: using this method to compare with other methods in the test set data to evaluate the performance and robustness of this method.
- This example was an online experiment with closed-loop calibration. Two phases of calibration and testing were contained in each experiment. Each session contains several blocks, and each block consists of 16 trials, where 2 trials for each target.
- the neural decoder was trained during the calibration phase. There were two observation blocks in the calibration phase, and the computer automatically completed the cursor control task. The neural signals of the volunteer during the observation phase were used to initialize the decoder. Subsequently, the decoder was further adjusted by using computer-assistant and ortho-impedance assistance, and the assistant ratio decreased with the increase of the number of blocks. The calibration process lasted about 10 minutes, and then the neural signals coming in the test phase were decoded by using the trained decoder.
- FIG. 2 is the trajectory diagram of the ball test phase on Dec. 14, 2020. It can be seen that the trajectory solved by the Kalman filter has a strong bias and cannot reach each target point on time.
- the trajectory distribution solved by the multi-model dynamic ensemble method is relatively uniform and successfully reaches each target point. It can be seen from the above results that the performance of the multi-model dynamic ensemble method is more stable.
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Abstract
Description
-
- (2-1) with an improved state-space model, using a pool of candidate models to dynamically characterize a relationship between observation variables and state variables, where the pool of candidate models comprises a linear function, a second-order polynomial function, and two neural networks. Here, the observation variables are neural signals, and the state variables are motion signals;
- (2-2) dynamically combining the candidate models according to a Bayesian update mechanism as an observation function of the state-space model;
- (3) using the training set and the validation set to train and evaluate the improved state-space model, and obtaining the parameters of different candidate models by training;
- (4) using the test set to test the performance and robustness of the model.
-
- selecting an appropriate window size to calculate the firing rate of the neural signal, intercepting a valid data segment according to a state label, normalizing and smoothing the data respectively, and obtaining the pre-processed motor neural signal.
x k=ƒ(x k-1)+v k-1
y k =h H
where, k represents a discrete time step; xk∈Rd
p(x k |y 0:k)=Σm=1 M p(x k | =m,y 0:k)p(=m|y 0:k)
p m(y k |y 0:k-1)=∫p m(y k |x k)p(x k |y 0:k-1)dx k
x k=ƒ(x k-1)+v k-1
y k =h(x k)+n k
y k=(x k)+n k
p(x k |y 0:k)=Σm=1 M p(x k | =m,y 0:k)p(=m|y 0:k)
p m(y k |y 0:k-1)=∫p m(y k |x k)P(x k |y 0:k-1)dx k
p(x k | =y 0:k)≈Σi=1 N
p m(y k |y 0:k-1)≈Σi=1 N
Claims (8)
X k =f(x k-1)+V k-1
y k =h H
p(x k |H k=m,y0:k)≈Σi=1 N
p m(y k |y 0:k-1)≈Σi=1 N
p m(y k |y 0:k-1)=∫p m(y k |x k)P(x k |y 0:k-1)dx k
X k =f(x k-1)+V k-1
y k =h H
p(x k |y 0:k)=Σm=1 M p(x k |H k =m,y 0:k)p(H k =m|y 0:k)
p m(y k |y 0:k-1)=∫p m(y k |x k)P(x k |y 0:k-1)dx k
p(x k |H k=m,y0:k)≈Σi=1 N
p m(y k |y 0:k-1)≈Σi=1 N
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| CN114925734B (en) * | 2022-07-20 | 2022-11-25 | 浙江大学 | Online neuron classification method based on neural mimicry calculation |
| CN115358367B (en) * | 2022-08-09 | 2023-04-18 | 浙江大学 | Dynamic self-adaptive brain-computer interface decoding method based on multi-model learning integration |
| CN116187152B (en) * | 2022-10-24 | 2023-08-25 | 浙江大学 | An Adaptive Decoding Method for Invasive Brain-Computer Interface Based on Dynamic Evolutionary Computation |
| CN115617180B (en) * | 2022-12-02 | 2023-04-07 | 浙江大学 | Smart hand motion decoding method based on invasive brain-computer interface |
| CN116432083A (en) * | 2023-03-30 | 2023-07-14 | 中国科学院深圳先进技术研究院 | Intention prediction method, device, equipment and storage medium based on brain-computer interface |
| WO2025043050A1 (en) * | 2023-08-24 | 2025-02-27 | Carnegie Mellon University | Training and use of a posture invariant brain-computer interface |
| US12386424B2 (en) * | 2023-11-30 | 2025-08-12 | Zhejiang University | Chinese character writing and decoding method for invasive brain-computer interface |
| CN118252513B (en) * | 2024-05-29 | 2024-09-20 | 浙江大学 | A positioning method and system based on electroencephalogram signal |
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| CN112764526A (en) | 2021-05-07 |
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