US10775467B2 - Magnetic resonance method and apparatus for echo-planar imaging with a zigzag-type trajectory in raw-data space - Google Patents
Magnetic resonance method and apparatus for echo-planar imaging with a zigzag-type trajectory in raw-data space Download PDFInfo
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Definitions
- the present invention concerns a method for echo-planar MR imaging with which MR signals are acquired with a zigzag-type trajectory in the raw-data space (k-space).
- the invention further relates to a magnetic resonance apparatus and an electrically readable data storage medium for implementing such a method.
- EPI echo-planar imaging
- MRT magnetic resonance tomography
- One EPI recording technique uses the so-called zigzag trajectory with which continuous phase encoding is used with simultaneous sinusoidal readout gradients. This technique has the advantage of producing less noise when recording MR signals, and achieves a shorter echo time as a result of the more effective, continuous data recording.
- the data points are not arranged on a Cartesian grid in k-space, which is a basic prerequisite for reconstructing image data from the k-space data using a reconstruction algorithm of the type employed in Cartesian parallel acquisition imaging, such as GRAPPA (generalized autocalibrating partially parallel acquisition).
- GRAPPA generalized autocalibrating partially parallel acquisition
- the data are already undersampled fourfold.
- the higher reconstruction factor in the GRAPPA reconstruction results in an increase in the g factor, which, together with the acceleration factor for the acquisition, describes the signal-to-noise loss caused by the parallel imaging reconstruction. If additional data are reconstructed from undersampled data by the use of a parallel imaging reconstruction algorithm, there is now a region with twofold undersampling in the middle of the k-space lines. This means that it is not possible to combine the GRAPPA reconstruction with an acceleration factor and to use iFT.
- An object of the present invention is to use an accelerated recording with the use of parallel imaging techniques while simultaneously not increasing the noise in the recorded MR image to an excessive degree.
- MR signals are entered in raw-data space along a zigzag-type trajectory.
- MR raw-data points are recorded with a sequence of readout gradients and phase-encoding gradients that cause a zigzag-type undersampled trajectory in the acquired raw-data space.
- the acquisition is performed such that the signal echoes are shifted by up to a quarter of the acquired raw-data space in the direction of the readout axis. Furthermore, an additional zigzag-type trajectory in the acquired raw-data space is reconstructed by a parallel-imaging method, and using the acquired zigzag-type trajectory. Then, at least one MR image is reconstructed using interlaced Fourier transform (iFT).
- iFT interlaced Fourier transform
- Shifting the signal echoes by up to a quarter of the acquired raw-data space in the direction of the readout axis causes the signal echoes to occur in a region of the raw-data space in which the spacing of the trajectories in the phase-encoding direction correspond to one ⁇ ky.
- ⁇ ky is proportional to the integral over the gradient along the phase-encoding axis, multiplied by the time in which the gradient is present.
- the difference between two trajectories in the direction of the phase-encoding axis is now less than one ⁇ ky, which means that the Nyquist theorem is satisfied here. If the echo is shifted by less than a quarter, the raw-data center is present in a region in which the spacing between two points in the phase-encoding direction is alternately smaller and greater than the minimum spacing required by the Nyquist theorem for reconstruction without aliasing. This means that the average spacing between adjacent points in the phase-encoding direction corresponds to the Nyquist criterion and the data can be reconstructed successfully.
- the raw data in the raw-data space are extended such that an extension segment is formed, this extension taking place with the application of a point symmetry in the raw-data space with respect to the raw-data center, so as to create an extended raw-data space encompassing the acquired raw-data space and the extension segment.
- the raw data in the extension segment are calculated using point reflection at the raw-data center.
- the raw data in the extension segment can be determined using the so-called zero-filling technique or with the partial Fourier technique.
- the signal echoes can be shifted in the direction of a readout axis by shortening or lengthening the dephasing pre-gradient before the signal readout.
- the signal echoes are shifted in a first direction of the readout axis, for example by a quarter.
- the extension segment then also lies in the first direction of the readout axis relative to the acquired raw-data space.
- One iFT can, for example, be applied to the acquired raw-data space to create a hybrid space and one iFT can be applied to the extension segment to create a hybrid extension segment, wherein the hybrid space and the hybrid extension segment are merged to represent a total hybrid space.
- This total hybrid space can be subjected to a Fourier transform along this axis to create the at least one MR image.
- the use of the extension segment provides two possibilities.
- the recording time is reduced while the resolution remains constant, with the other possibility, the recording time is left the same and the resolution is increased in the direction of the readout axis.
- this is achieved in that the at least one MR image that is reconstructed has a desired resolution, wherein the recording time required for the desired resolution of the at least one MR-image is reduced in that the raw-data space required for the desired resolution is not completely recorded.
- the raw-data space required for the desired resolution corresponds to the extended raw-data space with the extension segment. Since only a partial area was acquired in the extended raw-data space, the recording time is shorter than with a recording with which the entire extended raw-data space with MR signals was acquired for the desired resolution.
- the MR image is recorded with a defined recording time, wherein the raw data recorded in the defined recording time without using the extension segment can be used to reconstruct an MR reference image with a defined resolution.
- the MR image reconstructed with the iFT using the extension segment then has higher resolution than the defined resolution, namely higher resolution in the direction of the readout axis.
- the reconstruction of the additional zigzag-type trajectory is preferably performed using the GRAPPA method.
- the additional zigzag-type trajectory can be reconstructed such that an incline of the last segment of the acquired zigzag-type trajectory in the direction of the positive phase-encoding direction has an opposite preliminary sign than an incline of the last segment of the reconstructed zigzag-type trajectory in the direction of the positive phase-encoding direction.
- the invention encompasses a magnetic resonance apparatus with an image-sequence controller that operates an MR data acquisition scanner of the apparatus so as to produce the zigzag-type trajectory, and a computer for the reconstruction of the at least one MR image as described in detail above and below.
- the present invention also encompasses a non-transitory, computer-readable data storage medium encoded with programming instructions that, when the storage medium is loaded into a computer of a magnetic resonance apparatus, cause the computer to operate the magnetic resonance apparatus according to any or all of the embodiments of the method according to the invention, as described above.
- FIG. 1 schematically illustrates an MR apparatus with which MR images can be calculated according to the invention.
- FIG. 2 schematically illustrates raw-data space and the relationship between zigzag-type trajectories and the spacing between those trajectories.
- FIG. 3 schematically illustrates an example of raw-data space with a recorded and reconstructed trajectory, wherein image data cannot be reconstructed from the raw-data space shown in FIG. 3 without artifacts.
- FIG. 4 shows an example of raw-data space, which is filled with zigzag-type trajectories by extension in the readout direction, such that artifact-free reconstruction of an MR image is possible with undersampling.
- FIG. 5 shows an example of raw-data space, which was completely recorded, but with which artifact-free reconstruction is not possible with undersampling.
- FIG. 6 shows the recording of raw-data space with which, with a given recording time, the resolution can be increased by extension in the readout direction.
- FIG. 7 shows the recording of raw-data space with which the recording time can be reduced while the resolution remains constant.
- FIG. 8 is a flowchart for artifact-free reconstruction of MR images by extension of the raw-data space in the readout direction in accordance with the invention.
- an MR apparatus 10 is explained with which, as explained below, MR images are recorded with echo-planar imaging and undersampling, wherein, despite the undersampling, artifact-free images are generated.
- the MR apparatus 10 has a scanner 11 that has a basic field magnet that generates a polarization field B 0 .
- An examination subject 13 on a bed 12 is moved into the scanner 11 in order to record spatially encoded magnetic resonance signals from the examination subject 13 .
- the coils used for signal recording such as a whole-body coil or local coils are not depicted, for clarity.
- the invention can be applied with so-called parallel imaging with which the MR signals are recorded simultaneously with multiple local coils, i.e. a coil array or local coils.
- the radiation of radio-frequency pulses and switching of magnetic field gradients can cause the magnetization generated by the polarization field B 0 to be deflected out of the equilibrium position and spatially encoded and the resulting magnetization is detected by the receiver coils.
- Methods for generating MR images by radiating the RF pulses and switching magnetic field gradients in different combinations and sequences of MR images are in principle known to those skilled in the art, and so need not be explained in further detail herein.
- the MR apparatus furthermore has a control computer 20 that controls the MR apparatus 10 .
- the control computer 20 has a gradient controller 15 for controlling and switching the necessary magnetic field gradients.
- An RF controller 14 is provided to control and generate the RF pulses for deflecting the magnetization.
- An image-sequence controller 16 controls the sequence of magnetic field gradients and RF pulses and hence indirectly the gradient controller 15 and the RF controller 14 .
- An operator can control the MR apparatus 10 via an input unit 17 and MR images and other information required for the control can be displayed on a display monitor 18 .
- a computing unit 19 with at least one processor (not shown) is provided to control the different units in the control computer 20 .
- a memory 21 is provided in which program modules or programs can be stored, which, when they are executed by the computing unit 19 or its processor, control the operation of the MR apparatus 10 .
- the computing unit 19 is designed to calculate, according to the invention, MR images from the acquired MR signals such that undersampling is possible with a zigzag trajectory, wherein simultaneously a substantially artifact-free reconstruction with a satisfactory signal-noise ratio of the MR images is achieved.
- a combination of interlaced Fourier transform (iFT) and parallel-imaging requires the accelerated data to be recorded such that, following a parallel image reconstruction, the condition for iFT are satisfied.
- This condition is that the spacing of the raw data around the center of raw-data space, i.e. k-space, causes the Nyquist theorem to be satisfied, or in other words is smaller or equal to ⁇ ky is.
- the first possibility is to record only 2 ⁇ 3 in the readout direction of raw-data space or k-space. This shortens the recording time and, following a partial Fourier reconstruction in the readout direction of a readout axis, produces the same resolution as that originally desired for the k-space.
- the k-space center is then shifted so as to be located in a region in which the Nyquist criterion is satisfied.
- Another possibility for achieving this condition is to keep the recording time the same and to shift the recorded k-space by changing the pre-gradient in the direction of the readout axis. Since in this embodiment the position of the k-space center does not change, k-space is ultimately sampled asymmetrically. This again has the result that the k-space center is located on a region in which the Nyquist criterion is satisfied.
- a raw-data space 30 in the kx and ky directions, wherein kx is the readout axis and ky the phase-encoding axis, wherein a recorded trajectory 31 fills this raw-data space.
- the maximum spacing in the center of the raw-data space is 1 ⁇ ky, while at the edge it is 2 ⁇ ky.
- This raw dataset can be reconstructed with the iFT such that the signal-noise ratio is satisfactory and no substantial artifacts occur; this will be described as artifact-free below.
- a dashed line indicates a raw data-zigzag trajectory 32 with which the recording was made with an acceleration factor of 2, i.e. simple undersampling.
- the individual segments of the trajectory 32 have a spacing of 2 ⁇ ky in the middle and a maximum spacing of 4 ⁇ ky at the edge. This dataset 32 cannot be reconstructed to form an image without artifacts with the iFT.
- FIG. 3 depicts raw-data space 40 with a recorded zigzag trajectory 41 .
- the zigzag-type trajectory takes place via a periodically switched readout gradient and via a phase-encoding gradient corresponding to the absolute value of the readout gradient with a correspondingly lower amplitude.
- the trajectory was recorded with an acceleration factor of 2, i.e. only 50% of the raw data was recorded, while the trajectory 42 was reconstructed with parallel imaging techniques, for example GRAPPA.
- This raw dataset depicted in FIG. 3 cannot be reconstructed to form an image without artifacts with the iFT since the maximum spacing is 2 ⁇ ky in the center and 2 ⁇ ky at the edge.
- a further problem is that the points of intersection in the central raw-data region lead to artifacts with the iFT. Artifact-free reconstruction would require a further GRAPPA reconstruction.
- FIG. 4 depicts raw-data space with which the reconstruction takes place such that artifact-free reconstruction of MR images is possible even with undersampling with a factor of 2.
- the raw-data space has an acquired raw-data space 51 in which a zigzag-type trajectory 52 was recorded as depicted. Reducing the dephasing pre-gradient relative to the gradient during the readout time causes the signal echo to occur earlier and not in the geometric center of the acquired raw-data space, but in the raw-data center 60 .
- an additional zigzag-type trajectory 53 is calculated, for example using GRAPPA reconstruction.
- raw-data space is now read out asymmetrically and it is possible for an extended raw-data space to be formed, two thirds of which are the acquired raw-data space 51 and one third is an extension segment 55 .
- the extended raw-data space 50 now includes the acquired raw-data space 51 and the extension segment 55 .
- the raw-data points in the extension segment 55 can be determined by so-called zero filling or with partial Fourier. This uses the point symmetry of the extended raw-data space.
- the raw-data center 60 is used for this.
- the raw-data points in the extension segment 55 are calculated by point reflection at the raw-data center 60 . If the extended raw-data space 50 is now considered, it is identifiable that the spacing is only 1 ⁇ ky in the raw-data center while it is maximum 2 ⁇ ky at the edge. Furthermore, the points of intersection of the individual zigzag-type trajectories are not in the raw-data center 60 . This enables artifact-free reconstruction with the extended raw-data space 50 with the iFT. Hence, it is possible to record a two-fold accelerated MR image with echo-planar imaging using a GRAPPA reconstruction.
- a raw-data space 61 depicted in FIG. 5 has the same extension in the direction of the readout axis kx as the acquired raw-data space 51 in FIG. 4 .
- the maximum spacing of the segments of a trajectory is 2 ⁇ ky so that here once again artifact-free reconstruction is not possible. Artifact-free reconstruction is not possible without shifting the signal echoes.
- FIG. 6 depicts an embodiment similar to that in FIG. 4 , wherein once again raw-data space is divided into a recorded raw-data space 71 and an extension segment 75 in the readout direction.
- the length of the acquired raw-data space 71 with the acquired trajectory 73 and the reconstructed trajectory 72 once again corresponds to the length of the raw-data space 61 in FIG. 5 .
- the asymmetrical signal readout and the extension with point reflection about the center 76 in the kx direction with filling in the extension segment 75 again causes the raw-data space to be changed such that there is a maximum spacing of 1 ⁇ ky in the raw-data center, while the maximum spacing at the edge is 2 ⁇ ky.
- the extended raw-data space 70 can be reconstructed artifact-free.
- the recording time is the same as with the recording of the raw-data space in FIG. 5 , but the resolution is higher in the kx direction than it is in an MR image calculated with the raw-data space in FIG. 5 .
- the present invention enables the recording of raw-data points with undersampling using continuous phase encoding.
- the raw-data points do not lie on a Cartesian grid, but this is a perquisite for the use of Cartesian parallel imaging such as GRAPPA.
- the k-space center is no longer located in the middle of the acquired raw-data space as a result of which, first, the maximum spacing of the raw-data points is reduced and, furthermore, the points of intersection of the individual segments of the trajectory are not located in the raw-data center. It is now possible, for example, only to perform an iFT in the segment with the k-space center in order to obtain an image.
- extension segment primarily containing radio-frequency k-space information.
- This image could be combined with the first image in order to increase the resolution.
- a further possibility consists in not increasing the resolution, but recording less data in the kx direction. In this case, the recording time would be shorter than with a completely sampled raw-data space.
- the missing segment, the extension segment can be replaced either by zero filling or by a partial Fourier reconstruction from the data of the two recorded segments, since the data is point-symmetric with respect to the k-space center. This embodiment is described in FIG. 7 .
- the entire raw-data space 90 depicted in FIG. 7 has the same extension in the kx direction as the acquired raw-data space 71 .
- the method is summarized in FIG. 8 .
- the method starts in step S 80 and in step S 81 zigzag-type segments of a trajectory are recorded, wherein following signal recording, the raw dataset is divided into even and odd echoes.
- the signal recording is performed such that the maximum signal intensity, the center of the signal echoes, is shifted, preferably by a quarter of the recorded raw-data space, in the direction of the readout axis.
- step S 82 an additional trajectory is recorded for the even and odd recorded raw-data points in each case using a parallel recording technique.
- step S 83 the raw-data space is extended in the readout direction, as was described in connection with FIGS. 4, 6 and 7 .
- step S 84 an iFT is performed each for each segment of the extended raw-data space along the phase-encoding direction.
- step S 84 and the iFT there is now a part-transformed raw-data space and a part-transformed extension segment.
- Part-transformed means that a Fourier transform was performed only along one direction, namely along the phase-encoding direction.
- step S 85 the part-transformed raw-data space and the part-transformed extension segment are now used to apply an inverse Fourier transform back into the raw-data space (inverse Fourier transform in the phase-encoding direction). After step S 85 , this results in a hybrid space and a hybrid extension segment.
- step S 86 the elements generated in step S 85 , the hybrid space and the hybrid extension segment are merged to form a total hybrid space.
- step S 87 the Fourier transform can, as known, be performed to create the at least one MR image. The method ends in step S 88 .
- the above-described method makes it possible to apply a method such as is known from parallel imaging with EPI data recorded on a zigzag trajectory.
- a method such as is known from parallel imaging with EPI data recorded on a zigzag trajectory.
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Abstract
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| Application Number | Priority Date | Filing Date | Title |
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| DE102016224175.3A DE102016224175B4 (en) | 2016-12-06 | 2016-12-06 | EPI with zigzag trajectory and parallel imaging |
| DE102016224175 | 2016-12-06 | ||
| DE102016224175.3 | 2016-12-06 |
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| US20180156884A1 US20180156884A1 (en) | 2018-06-07 |
| US10775467B2 true US10775467B2 (en) | 2020-09-15 |
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| US10657646B2 (en) * | 2018-06-14 | 2020-05-19 | Uih America, Inc. | Systems and methods for magnetic resonance image reconstruction |
| CN112557978B (en) * | 2020-11-26 | 2022-03-25 | 上海交通大学 | Multi-echo sampling method based on three-dimensional non-Cartesian trajectory |
| CN115598575B (en) * | 2021-06-28 | 2025-10-28 | 上海联影医疗科技股份有限公司 | Magnetic resonance imaging method, apparatus, computer equipment and storage medium |
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