EP2226390A4 - Melting curve analyzing method and melting curve analyzing device - Google Patents

Melting curve analyzing method and melting curve analyzing device

Info

Publication number
EP2226390A4
EP2226390A4 EP08863847.3A EP08863847A EP2226390A4 EP 2226390 A4 EP2226390 A4 EP 2226390A4 EP 08863847 A EP08863847 A EP 08863847A EP 2226390 A4 EP2226390 A4 EP 2226390A4
Authority
EP
European Patent Office
Prior art keywords
melting curve
curve analyzing
analyzing device
analyzing method
melting
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Granted
Application number
EP08863847.3A
Other languages
German (de)
French (fr)
Other versions
EP2226390A1 (en
EP2226390B1 (en
Inventor
Kosuke Kubo
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Arkray Inc
Original Assignee
Arkray Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Arkray Inc filed Critical Arkray Inc
Publication of EP2226390A1 publication Critical patent/EP2226390A1/en
Publication of EP2226390A4 publication Critical patent/EP2226390A4/en
Application granted granted Critical
Publication of EP2226390B1 publication Critical patent/EP2226390B1/en
Active legal-status Critical Current
Anticipated expiration legal-status Critical

Links

Classifications

    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N25/00—Investigating or analyzing materials by the use of thermal means
    • G01N25/02—Investigating or analyzing materials by the use of thermal means by investigating changes of state or changes of phase; by investigating sintering
    • G01N25/04—Investigating or analyzing materials by the use of thermal means by investigating changes of state or changes of phase; by investigating sintering of melting point; of freezing point; of softening point
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6827—Hybridisation assays for detection of mutation or polymorphism
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2527/00—Reactions demanding special reaction conditions
    • C12Q2527/107—Temperature of melting, i.e. Tm

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Analytical Chemistry (AREA)
  • Biochemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • Immunology (AREA)
  • General Physics & Mathematics (AREA)
  • Pathology (AREA)
  • Organic Chemistry (AREA)
  • Engineering & Computer Science (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Molecular Biology (AREA)
  • Biophysics (AREA)
  • Microbiology (AREA)
  • Biotechnology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • Genetics & Genomics (AREA)
  • Investigating Or Analyzing Materials Using Thermal Means (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
EP08863847.3A 2007-12-26 2008-12-25 Melting curve analyzing method and melting curve analyzing device Active EP2226390B1 (en)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
JP2007334975 2007-12-26
PCT/JP2008/073535 WO2009081965A1 (en) 2007-12-26 2008-12-25 Melting curve analyzing method and melting curve analyzing device

Publications (3)

Publication Number Publication Date
EP2226390A1 EP2226390A1 (en) 2010-09-08
EP2226390A4 true EP2226390A4 (en) 2013-05-01
EP2226390B1 EP2226390B1 (en) 2018-08-29

Family

ID=40801265

Family Applications (1)

Application Number Title Priority Date Filing Date
EP08863847.3A Active EP2226390B1 (en) 2007-12-26 2008-12-25 Melting curve analyzing method and melting curve analyzing device

Country Status (6)

Country Link
US (1) US8364415B2 (en)
EP (1) EP2226390B1 (en)
JP (1) JP5542438B2 (en)
KR (1) KR101251177B1 (en)
CN (1) CN101663408B (en)
WO (1) WO2009081965A1 (en)

Families Citing this family (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP5843501B2 (en) 2010-07-07 2016-01-13 アークレイ株式会社 Nucleic acid abundance ratio measuring apparatus, nucleic acid abundance ratio measuring method, nucleic acid abundance ratio measuring program, determination method, and nucleic acid abundance ratio measuring kit
EP2766711B1 (en) 2011-10-14 2017-12-13 Becton, Dickinson and Company Square wave thermal cycling
KR101483576B1 (en) 2011-10-31 2015-01-21 아크레이 가부시키가이샤 Method for measuring abundance of genes
CN102559868B (en) * 2011-11-28 2014-11-05 厦门大学 Method for qualitative and quantitative detection of multiple target nucleotide sequences with single tube
AU2015221851B2 (en) * 2014-02-25 2019-05-09 C.Y. O'connor Erade Village Foundation Inc. Methods and systems for measuring melting temperatures
US20210005286A1 (en) 2018-01-23 2021-01-07 Biocartis Nv Methods for the analysis of dissociation melt curve data
BR112020019755A2 (en) 2018-04-20 2021-01-26 Seegene, Inc. method and apparatus for detecting a plurality of target nucleic acid sequences in the sample

Citations (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6174670B1 (en) * 1996-06-04 2001-01-16 University Of Utah Research Foundation Monitoring amplification of DNA during PCR
US6506568B2 (en) * 2000-02-10 2003-01-14 The Penn State Research Foundation Method of analyzing single nucleotide polymorphisms using melting curve and restriction endonuclease digestion
US20050233335A1 (en) * 2004-04-20 2005-10-20 University Of Utah Research Foundation Nucleic and melting analysis with saturation dyes
US20060172324A1 (en) * 2005-01-28 2006-08-03 Roche Molecular Systems, Inc. Methods of genotyping using differences in melting temperature

Family Cites Families (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP3071085B2 (en) 1993-03-15 2000-07-31 株式会社日立製作所 Chromatogram analysis display method and apparatus
EP1499745B1 (en) * 2002-04-26 2016-11-23 University of Utah Research Foundation Characterization of single stranded nucleic acids by melting analysis of secondary structure using double strand-specific nucleic acid dye
JP4454265B2 (en) 2003-08-13 2010-04-21 アークレイ株式会社 Melting curve analysis method
JP4355281B2 (en) * 2004-12-13 2009-10-28 株式会社インテックシステム研究所 Peak extraction method and peak extraction apparatus
JP2007282512A (en) 2006-04-12 2007-11-01 Arkray Inc Method for inhibiting self-annealing formation and use thereof

Patent Citations (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6174670B1 (en) * 1996-06-04 2001-01-16 University Of Utah Research Foundation Monitoring amplification of DNA during PCR
US6506568B2 (en) * 2000-02-10 2003-01-14 The Penn State Research Foundation Method of analyzing single nucleotide polymorphisms using melting curve and restriction endonuclease digestion
US20050233335A1 (en) * 2004-04-20 2005-10-20 University Of Utah Research Foundation Nucleic and melting analysis with saturation dyes
US20060172324A1 (en) * 2005-01-28 2006-08-03 Roche Molecular Systems, Inc. Methods of genotyping using differences in melting temperature

Non-Patent Citations (4)

* Cited by examiner, † Cited by third party
Title
BRANDFASS CHRISTOPH ET AL: "Simultaneous detection of Fusarium culmorum and F. graminearum in plant material by duplex PCR with melting curve analysis", BMC MICROBIOLOGY, BIOMED CENTRAL LTD, GB, vol. 6, no. 1, 23 January 2006 (2006-01-23), pages 1 - 10, XP021014869, ISSN: 1471-2180, DOI: 10.1186/1471-2180-6-4 *
KURTZ D I ET AL: "Multiple peaks in the derivative melting curve of chromatin from animals of varying age", MECHANISMS OF AGEING AND DEVELOPMENT, ELSEVIER SEQUOIA, LAUSANNE, CH, vol. 3, 1 January 1974 (1974-01-01), pages 37 - 49, XP025423520, ISSN: 0047-6374, [retrieved on 19740101], DOI: 10.1016/0047-6374(74)90004-9 *
L. ZHOU ET AL: "Closed-Tube Genotyping with Unlabeled Oligonucleotide Probes and a Saturating DNA Dye", CLINICAL CHEMISTRY, vol. 50, no. 8, 1 August 2004 (2004-08-01), pages 1328 - 1335, XP055041287, ISSN: 0009-9147, DOI: 10.1373/clinchem.2004.034322 *
See also references of WO2009081965A1 *

Also Published As

Publication number Publication date
US20100280789A1 (en) 2010-11-04
KR20090130287A (en) 2009-12-22
KR101251177B1 (en) 2013-04-08
CN101663408B (en) 2012-11-28
EP2226390A1 (en) 2010-09-08
EP2226390B1 (en) 2018-08-29
JPWO2009081965A1 (en) 2011-05-06
JP5542438B2 (en) 2014-07-09
CN101663408A (en) 2010-03-03
WO2009081965A1 (en) 2009-07-02
US8364415B2 (en) 2013-01-29

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