DK174705B1 - Peptides having immunological properties corresponding to HIV-2 viruses, antigens and immunogenic agents containing such peptides, and methods and kits for an in vitro diagnosis of HIV-2 - Google Patents
Peptides having immunological properties corresponding to HIV-2 viruses, antigens and immunogenic agents containing such peptides, and methods and kits for an in vitro diagnosis of HIV-2 Download PDFInfo
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- DK174705B1 DK174705B1 DK198805133A DK513388A DK174705B1 DK 174705 B1 DK174705 B1 DK 174705B1 DK 198805133 A DK198805133 A DK 198805133A DK 513388 A DK513388 A DK 513388A DK 174705 B1 DK174705 B1 DK 174705B1
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- hiv
- peptides
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Classifications
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K7/00—Peptides having 5 to 20 amino acids in a fully defined sequence; Derivatives thereof
- C07K7/04—Linear peptides containing only normal peptide links
- C07K7/06—Linear peptides containing only normal peptide links having 5 to 11 amino acids
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- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P31/00—Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
- A61P31/12—Antivirals
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P31/00—Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
- A61P31/12—Antivirals
- A61P31/14—Antivirals for RNA viruses
- A61P31/18—Antivirals for RNA viruses for HIV
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
- C07K14/005—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from viruses
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N7/00—Viruses; Bacteriophages; Compositions thereof; Preparation or purification thereof
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/70—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving virus or bacteriophage
- C12Q1/701—Specific hybridization probes
- C12Q1/702—Specific hybridization probes for retroviruses
- C12Q1/703—Viruses associated with AIDS
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/53—Immunoassay; Biospecific binding assay; Materials therefor
- G01N33/569—Immunoassay; Biospecific binding assay; Materials therefor for microorganisms, e.g. protozoa, bacteria, viruses
- G01N33/56983—Viruses
- G01N33/56988—HIV or HTLV
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- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K39/00—Medicinal preparations containing antigens or antibodies
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N2740/00—Reverse transcribing RNA viruses
- C12N2740/00011—Details
- C12N2740/10011—Retroviridae
- C12N2740/15011—Lentivirus, not HIV, e.g. FIV, SIV
- C12N2740/15022—New viral proteins or individual genes, new structural or functional aspects of known viral proteins or genes
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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- C12N2740/00—Reverse transcribing RNA viruses
- C12N2740/00011—Details
- C12N2740/10011—Retroviridae
- C12N2740/16011—Human Immunodeficiency Virus, HIV
- C12N2740/16111—Human Immunodeficiency Virus, HIV concerning HIV env
- C12N2740/16122—New viral proteins or individual genes, new structural or functional aspects of known viral proteins or genes
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N2740/00—Reverse transcribing RNA viruses
- C12N2740/00011—Details
- C12N2740/10011—Retroviridae
- C12N2740/16011—Human Immunodeficiency Virus, HIV
- C12N2740/16211—Human Immunodeficiency Virus, HIV concerning HIV gagpol
- C12N2740/16222—New viral proteins or individual genes, new structural or functional aspects of known viral proteins or genes
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N2333/00—Assays involving biological materials from specific organisms or of a specific nature
- G01N2333/005—Assays involving biological materials from specific organisms or of a specific nature from viruses
- G01N2333/08—RNA viruses
- G01N2333/15—Retroviridae, e.g. bovine leukaemia virus, feline leukaemia virus, feline leukaemia virus, human T-cell leukaemia-lymphoma virus
- G01N2333/155—Lentiviridae, e.g. visna-maedi virus, equine infectious virus, FIV, SIV
- G01N2333/16—HIV-1, HIV-2
- G01N2333/162—HIV-1, HIV-2 env, e.g. gp160, gp110/120, gp41, V3, peptid T, DC4-Binding site
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N2469/00—Immunoassays for the detection of microorganisms
- G01N2469/20—Detection of antibodies in sample from host which are directed against antigens from microorganisms
Abstract
Description
DK 174705 B1DK 174705 B1
Den foreliggende opfindelse angår peptider med immunologiske egenskaber, eventuelt immunogene egenskaber, der er fælles med antigener, der kan opnås i renset form, ud fra virus, som er i stand til at fremprovokere lymphadenopatier, der kan udvikle sig til erhvervet immunde-' 5 fektsyndrom (AIDS) hos mennesker.The present invention relates to peptides with immunological properties, possibly immunogenic properties, which are common to purified antigens obtainable from viruses capable of provoking lymphadenopathies which can develop into acquired immune deficiency syndrome. (AIDS) in humans.
Opfindelsen angår nærmere bestemt hidtil ukendte peptider af den i krav 1 angivne art. Disse peptider kan genkendes af antistoffer, der induceres i mennesker af virus betegnet ved forkortelsen HIV (ifølge nomenklaturen 10 defineret i NATURE). Peptiderne ifølge opfindelsen har immunogene egenskaber kan gøres immunogene in vivo, hvilken immunogenicitet kan manifestere sig ved en induktion in vivo af antistoffer, der genkender de antigener, som er karakteristiske for HIV-2 virus, samt (for så vidt angår visse af disse peptider) antigener karakteristiske for HIV-1. Opfindelsen 15 angår endvidere et antigent middel af den i krav 23 angivne art eller et immunogent middel af den i krav 24 angivne art.More particularly, the invention relates to novel peptides of the kind set forth in claim 1. These peptides can be recognized by antibodies induced in humans by virus designated by the abbreviation HIV (according to nomenclature 10 defined in NATURE). The peptides of the invention have immunogenic properties can be made immunogenic in vivo, which immunogenicity can be manifested by an in vivo induction of antibodies that recognize the antigens characteristic of the HIV-2 virus, as well as (in respect of some of these peptides). antigens characteristic of HIV-1. The invention further relates to an antigenic agent of the kind set forth in claim 23 or an immunogenic agent of the kind set forth in claim 24.
Opfindelsen angår også anvendelsen af disse peptider til diagnosticering in vitro af HIV-2-infektion i en biologisk væske.The invention also relates to the use of these peptides for the in vitro diagnosis of HIV-2 infection in a biological fluid.
2020
Endelig angår opfindelsen et kit til in vitro diagnosticering af HIV-2-infektion i en biologisk væske.Finally, the invention relates to a kit for in vitro diagnosis of HIV-2 infection in a biological fluid.
Visse af de omhandlede peptider kan anvendes i metoder til diagnose in 25 vivo af visse former for AIDS hos mennesker, og peptiderne kan endvidere anvendes i systemer eller "kits" til diagnose.Some of the present peptides can be used in in vivo methods of diagnosis of certain forms of AIDS in humans, and the peptides can also be used in systems or "kits" for diagnosis.
Et første retrovirus, som er benævnt LAV-1 eller HIV-1, er blevet isoleret og beskrevet i GB patentansøgning nr. 83/24.800 og EP patentansøgning 30 nr. 84/401.834 indleveret den 14. september 1984. Dette virus er ligeledes blevet beskrevet af F. Barre Sinoussi et al i Science 220, 45-99, side 868-871.A first retrovirus, designated LAV-1 or HIV-1, has been isolated and described in GB Patent Application No. 83 / 24,800 and EP Patent Application No. No. 84 / 401,834 filed September 14, 1984. This virus has also been described. by F. Barre Sinoussi et al in Science 220, 45-99, pages 868-871.
2 DK 174705 B12 DK 174705 B1
Varianter af dette HIV-1 virus, som betegnes LAV, EU og LAV MAL, er ligeledes blevet isoleret, karakteriseret og beskrevet i EP patentansøgning nr. 84/401.834.Variants of this HIV-1 virus, designated LAV, EU and LAV MAL, have also been isolated, characterized and described in EP Patent Application No. 84 / 401,834.
5 HIV-1 virus og disses varianter besidder de følgende egenskaber:5 HIV-1 viruses and their variants have the following properties:
Som foretrukne målceller har de humane Leu3 celler (eller T4-lymfocytter) og disses "immortaliserede" cellederivater.As preferred target cells, they have human Leu3 cells (or T4 lymphocytes) and their "immortalized" cell derivatives.
10 De har en revers transcriptase-aktivitet, som nødvendiggør tilstedeværelsen af Mg2+-ioner, og udviser en kraftig aktivitet overfor poly(adenylat-oligo-deoxythymidylase) poly(A)-oligo(dT)12-18).They have a reverse transcriptase activity which necessitates the presence of Mg 2+ ions, and exhibit a strong activity against poly (adenylate oligodoxydymidylase) poly (A) oligo (dT) 12-18).
| De har en densitet på 1,16-1,17 bestemt i en saccharose-gradient.| They have a density of 1.16-1.17 determined in a sucrose gradient.
1515
De har en middeldiameter på 139 nm og en gennemsnitlig kernediameter på 41 nm.They have a mean diameter of 139 nm and an average core diameter of 41 nm.
Lysateme af disse virus indeholder et protein benævnt p25 (kerneprotein), 20 som ikke udviser immunologisk krydsning med proteinet p24 fra HTLV-1.The lysates of these viruses contain a protein called p25 (core protein) which does not exhibit immunological cross-linking with the protein p24 from HTLV-1.
De indeholder et protein benævnt p42, som hører til deres kappe, og de indeholder desuden et kappe-glycoprotein benævnt gp110, som har en molekylvægt på 110 000.They contain a protein called p42 which belongs to their sheath, and they also contain a sheath glycoprotein called gp110 which has a molecular weight of 110,000.
2525
Isoleringen og karakteriseringen af retrovirus, som hører til en bestemt klasse og som kun har et reduceret immunologisk slægtskab med sine ophav, er beskrevet i EP patentansøgning nr. 87/400.151.4. Disse retrovirus, som er blevet grupperet under betegnelsen HIV-2, er blevet isoleret i 30 forbindelse med talrige afrikanske sygdomstilfælde, hvor der forekommer symptomer på en lymphadenopati eller et AlDS-tilfælde.The isolation and characterization of retroviruses belonging to a particular class and which have only a reduced immunological relationship with their origin are described in EP Patent Application No. 87 / 400,151.4. These retroviruses, which have been grouped under the designation HIV-2, have been isolated in connection with numerous African diseases where symptoms of a lymphadenopathy or an AlDS case occur.
3 DK 174705 B13 DK 174705 B1
Retrovirus af typen HIV-2 udmærker sig, ligesom retrovirus af typen HIV-' 1, ved en tropisme overfor humane T4-lymfocytter og ved en cytopatogen I effekt over for disse lymfocytter, når de formerer sig. Herved forårsages dels generaliserede og vedvarende polyadenopatier og dels AIDS.HIV-2 retroviruses, like HIV-1 retroviruses, are distinguished by a tropism against human T4 lymphocytes and by a cytopathogenic effect on these lymphocytes as they multiply. This causes both generalized and persistent polyadenopathies and AIDS.
5 Nærmere bestemt kan det siges, at retrovirus oprenset fra HIV-2 generelt besidder følgende egenskaber: de foretrukne målceller for HIV-2 retrovirus er humane Leu3-celler (eller 10 T4-lymfocytter) og immortaliserede celler afledt af disse T4-lymfocytter; de er cytotoksiske overfor humane T4-lymfocytter, de har en revers transcriptaseaktivitet, der nødvendiggør tilstedeværelsen af Mg2+-ioner og udviser en kraftig aktivitet overfor poly(adenylat-oligodeoxythymidylase) 15 (poly(A)-oligo(dT)12-18); I de har en densitet på 1,16 bestemt i en saccharose-gradient; de har en middeldiameter på 140 nm og en kerne med en middeldiameter 20 på 41 nm; de kan dyrkes i permanente stammer af typen HUT eller som udtrykker T4-proteinet; 25 de inficerer ikke T8-lymfocytter; lysater af disse virus indeholder et protein benævnt p26, der ikke udviser immunologisk overkrydsning med protein p24 fra HTLV-I virus eller HTLV-II virus; 30 disse lysater indeholder endvidere et protein benævnt p16, der ikke genkendes immunologisk af proteinet p19 fra HTLV-I eller HTLV-I I virus i ra-dioimmunopræcipitationsassay; 4 DK 174705 B1 I.In particular, it can be said that retroviruses purified from HIV-2 generally possess the following properties: the preferred target cells for HIV-2 retroviruses are human Leu3 cells (or 10 T4 lymphocytes) and immortalized cells derived from these T4 lymphocytes; they are cytotoxic to human T4 lymphocytes, they have a reverse transcriptase activity which necessitates the presence of Mg2 + ions and exhibits potent activity against poly (adenylate oligodeoxythymidylase) 15 (poly (A) oligo (dT) 12-18); In they have a density of 1.16 determined in a sucrose gradient; they have a mean diameter of 140 nm and a core with a mean diameter 20 of 41 nm; they can be grown in permanent strains of the HUT type or which express the T4 protein; They do not infect T8 lymphocytes; lysates of these viruses contain a protein called p26 that does not exhibit immunological cross-over with protein p24 from HTLV-I virus or HTLV-II virus; These lysates further contain a protein called p16 which is not immunologically recognized by the protein p19 of HTLV-I or HTLV-I I virus in radioimmunoprecipitation assay; 4 DK 174705 B1 I.
de indeholder endvidere et kappeglycoprotein med molekylvægt af størrelsesordenen 130.000-140.000, der ikke udviser immunologisk overkrydsning med gp110 fra HIV-1, men som til gengæld krydser immunologisk 5 med kappeglycoproteinet gp140 fra STLV-III (virus isoleret fra aber); disse lysater indeholder endvidere antigener, der kan mærkes med 35S-cystein, hvis molekylvægt ligger mellem 32 000 og 42 000-45 000: de omfatter endvidere et antigen med molekylvægt af størrelsesordenen 36 000 10 og et antigen med en molekylvægt af størrelsesordenen 42 000, idet et af disse antigener (benævnt p36 og p42) sandsynligvis udgør et transmembran-glycoprotein fra HIV-2 virus, det genomiske RNA i HIV-2 hybridiserer ikke med genomisk RNA fra HIV-15 1 under stringente betingelser; under ikke-stringente betingelser hybridiserer det genomiske RNA fra HIV-2 hverken med env-genet eller med LTR, som støder op til genet, i HIV-1, eller med sekvenser fra pol-regionen i HIV-1 genomet; 20 under ikke-stringente betingelser hybridiserer det svagt med nucleotidse-kvenserne i HIV-1 regionen.they also contain a molecular weight envelope glycoprotein of the order of 130,000-140,000 which does not exhibit immunological cross-over with gp110 from HIV-1 but which in turn crosses immunologically 5 with the envelope glycoprotein gp140 from STLV-III (virus isolated from monkeys); these lysates further contain 35S cysteine-tagged antigens whose molecular weight is between 32,000 and 42,000-45,000: they further comprise a molecular weight antigen of the order of 36,000 and an antigen of molecular weight of the order of 42,000, since one of these antigens (designated p36 and p42) is likely to be a transmembrane glycoprotein of HIV-2 virus, the genomic RNA of HIV-2 does not hybridize with genomic RNA of HIV-15 1 under stringent conditions; under non-stringent conditions, the HIV-2 genomic RNA does not hybridize with either the env gene or the LTR adjacent to the gene in HIV-1, or with sequences from the pol region of the HIV-1 genome; 20 under non-stringent conditions, it weakly hybridizes with the nucleotide sequences of the HIV-1 region.
Et andet retrovirus benævnt SIV-1, hvilken betegnelse erstatter den tidlige-25 re anvendte betegnelse STLV-IH, er isoleret hos rhesusaber (M.D. Daniel et al. Science 228, 1201 (1985) N.L. Letwin et al, Science 230, 71 (1985) under betegnelsen "STLV-lllmac").Another retrovirus called SIV-1, which replaces the earlier term STLV-1H, is isolated from rhesus monkeys (MD Daniel et al. Science 228, 1201 (1985) NL Letwin et al., Science 230, 71 (1985). ) under the designation "STLV-lllmac").
Et yderligere retrovirus benævnt "STLV-IIIagm" (eller SIVagm) er isoleret 30 hos vilde grønne aber. Men i modsætning til de virus, der er til stede hos rhesusaben, synes tilstedeværelsen af "STLV-IIIagm" ikke at fremkalde sygdomme af typen AIDS hos afrikanske grønne aber.A further retrovirus named "STLV-IIIagm" (or SIVagm) is isolated from wild green monkeys. But unlike the viruses present in the rhesus monkey, the presence of "STLV-IIIagm" does not appear to induce AIDS-type diseases in African green monkeys.
5 DK 174705 B15 DK 174705 B1
En stamme af retrovirus SIV-1mac er deponeret ved CNCM den 7. februar 1986 under nr. 1-521. Studier har vist, at retrovirus SIV-1 indeholder visse proteiner, der udviser et vist immunologisk slægtskab med struktur-i proteiner eller -glycoproteiner, der kan opnås under analoge betingelser ! 5 ud fra HIV-2. Denne retrovirus SIV-1, hvis infektiøse karakter man har konstateret hos aber, blev betegnet STLVIII af de forskere, der isolerede det (jævnfør de bibliografiske referencer ovenfor).A strain of retrovirus SIV-1mac was deposited at CNCM on February 7, 1986, under Nos. 1-521. Studies have shown that retrovirus SIV-1 contains certain proteins that exhibit a certain immunological relationship to structure-in proteins or glycoproteins obtainable under analogous conditions! 5 from HIV-2. This SIV-1 retrovirus, whose infectious nature has been found in monkeys, was named STLVIII by the researchers who isolated it (see the bibliographic references above).
Af sproglige årsager bliver disse virus i det følgende kun betegnet ved ud-10 trykket SIV (udtrykket SIV er den engelske forkortelse for "Simian Immunodeficiency Virus" (immundefektvirus hos aber) eventuelt efterfulgt af en forkortelse, der angiver den abeart, hvorfra de er opnået, f.eks. MAC eller mac for rhesusaber eller AGM for afrikanske grønne aber (forkortelse for African Green Monkey).For linguistic reasons, these viruses are hereinafter referred to only by the expression SIV (the term SIV is the English abbreviation for "Simian Immunodeficiency Virus"), optionally followed by an abbreviation indicating the monkey from which they were obtained. , such as MAC or mac for rhesus monkeys or AGM for African green monkeys (abbreviation for African Green Monkey).
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Ved at anvende de samme teknikker, som beskrevet ovenfor, har man konstateret, at man også ud fra SIV-1 mac kan opnå: et principalt kerneprotein benævnt p27, der har en molekylvægt af størrel-20 sesordenen 27 kd, et større kappeglycoprotein, benævnt gp140, et protein benævnt p32, der sandsynligvis er et transmembrant protein, 25 der sjældent observeres ved radioimmunopræcipationsassay (RIPA), når virus forinden er mærket med 35S-cystein, men som kan observeres ved immunoaftryksprøver (Western blots) i form af brede bånd.Using the same techniques as described above, it has been found that one can also obtain from SIV-1 mac: a principal nuclear protein called p27, having a molecular weight of the order of 27 kd, a larger envelope glycoprotein, called gp140, a protein called p32, which is probably a transmembrane protein, is rarely observed by radioimmunoprecipitation assay (RIPA) when the virus is previously labeled with 35S-cysteine, but which can be observed in broad-band immunoassay samples.
Mere præcise undersøgelser er gennemført på de ovennævnte virus HIV-30 2 og SIV virus. Fortsatte studier af HIV-2 retrovirus har ligeledes ført til opnåelse af komplementære DNA-sekvenser (cDNA) til RNA i disses ge-nomer. Den komplette nucleotidsekvens for cDNA for et repræsentativt retrovirus af klassen HIV-2 (HIV-2-ROD) er deponeret den 21. februar 6 DK 174705 B1 1986 ved CNCM med nummeret I- 522 under referencebetegnelsen LAV-II ROD.More precise studies have been carried out on the above viruses HIV-30 2 and SIV virus. Continued studies of HIV-2 retroviruses have also led to the generation of complementary DNA sequences (cDNA) for RNA in their genomes. The complete nucleotide sequence of cDNA for a representative HIV-2 (HIV-2-ROD) retrovirus was deposited on February 21, 2006 by CNCM under I-522 under the reference designation LAV-II ROD.
Denne nucleotidsekvens og de åbne læserammer som de indeholder er 5 angivet på figur 1 A.This nucleotide sequence and the open reading frames that they contain are given in Figure 1A.
I øvrigt har fortsatte studier af andre retrovirus ligeledes muliggjort en kort-læggelse af disses fuldstændige nucleotidsekvenser. Dette gælder især for cDNA afledt af genomisk RNA fra SIV-virus.Furthermore, continued studies of other retroviruses have also enabled the mapping of their complete nucleotide sequences. This is especially true for cDNA derived from genomic RNA from SIV virus.
1010
Kloning og sekvensbestemmelse af SIV-1mac virus har muliggjort en kort-læggelse af dettes nucleotidsekvens og gennemførtes under følgende betingelser: 15 DNA fra HUT 78 celler inficeret med SIV-virus (isolat STLV-III mac 142-83 beskrevet af Daniel et al (1985) Science, 228. side 1201-1204), og partielt nedbrudt med restriktionsenzymet Sau3A blev klonet i BamHI-restriktionsstedet i bakteriophag _-vektoren ELBL3 til opnåelse af et genomisk bibliotek. De 2 millioner rekombinante phager i det således sam-20 mensatte genomiske bibliotek blev undersøgt in situ under sikkerhedsbestemmelser P3 ved hjælp af sekvenser af HIV-2 virus stammende fra klonerne lambda-ROD4, lambda-ROD35 og E2 (Clevel et al (1986) Nature, 324. side 691) og blev nick-translateret.Cloning and sequencing of SIV-1mac virus enabled mapping of its nucleotide sequence and was performed under the following conditions: 15 DNA from HUT 78 cells infected with SIV virus (isolate STLV-III mac 142-83 described by Daniel et al (1985) Science, 228 pages 1201-1204), and partially digested with the restriction enzyme Sau3A was cloned at the BamHI restriction site in the bacteriophage vector ELBL3 to obtain a genomic library. The 2 million recombinant phages in the thus compiled genomic library were examined in situ under safety assays P3 using sequences of HIV-2 virus derived from clones lambda-ROD4, lambda-ROD35 and E2 (Clevel et al (1986) Nature , 324. page 691) and was nick-translated.
25 Hybridiseringen gennemførtes ved 5xSSC ved 50 °C, og udvaskningerne ved 2xSSC ved 50 °C. En enkelt klon indeholdende samtlige virussekvenser opnåedes. Denne klon benævntes lambda-SIV-1. Indsætningen i phag lambda-SIV-1 måler 16,5 kb i alt og omfatter en integreret provirus, hvor der kun mangler de 250 første baser fra det venstrestillede LTR, mens det 30 højrestillede LTR er komplet.The hybridization was performed at 5xSSC at 50 ° C and the leaches at 2xSSC at 50 ° C. A single clone containing all virus sequences was obtained. This clone was named lambda-SIV-1. The insert in the phag lambda-SIV-1 measures 16.5 kb in total and includes an integrated provirus, where only the first 250 bases are missing from the left-sided LTR, while the 30 right-sided LTR is complete.
7 DK 174705 B17 DK 174705 B1
Det integrerede provirus blev sekvensbestemt ved dideoxynucleotidmetoden efter subkloning af tilfældige fragmenter i pha-gen M13mp8. Der analyseredes 300 subkloner.The integrated provirus was sequenced by the dideoxynucleotide method after subcloning random fragments into the pha gene M13mp8. 300 subclones were analyzed.
I' 5 cDNA-fragmenter stammende fra klonen lambda-SIV-1 indsat i plasmider- ne pSIV1.1 og pSIV-1.2 blev deponeret ved CNCM den 15. april 1987 under numrene I-658 (pSIV-1.1) og I-659 (pSIV-1.2).In '5 cDNA fragments derived from the clone lambda-SIV-1 inserted into plasmids pSIV1.1 and pSIV-1.2 were deposited by CNCM on April 15, 1987 under numbers I-658 (pSIV-1.1) and I-659 ( pSIV-1.2).
Resultaterne er angivet i de nedenfor beskrevne figurer.The results are given in the figures described below.
1010
Fig. TB betegner nucleotidsekvensen af genomet fra SIV virus og de sekvenser, der er afledt deraf for de virale proteiner svarende til produkterne af generne gag, pol, env, Q, X, R, tat, art, F.FIG. TB denotes the nucleotide sequence of the genome from SIV virus and the sequences derived therefrom for the viral proteins corresponding to the products of the genes gag, pol, env, Q, X, R, tat, species, F.
15 Fig. 3-11 og fig. 1C viser sammenligning af de teoretiske produkter af de virale gener og af LTR mellem HlV-2 og SIVmac (_SIV-1).FIG. 3-11 and FIGS. Figure 1C shows comparison of the theoretical products of the viral genes and of the LTR between HIV-2 and SIVmac (_SIV-1).
Nucleinsyresekvenserne for cDNA fra SIV er anbragt over for nucleinsyre-sekvenserne i HIV-2 ROD virus for så vidt angår LTR-sekvensen (jvf. fig.The nucleic acid sequences of cDNA from SIV are positioned against the nucleic acid sequences of the HIV-2 ROD virus as far as the LTR sequence is concerned (cf. FIG.
20 1 C). Denne præsentation som man genkender fra det fuldstændige genom ved at sammenligne fig. 1B med fig. 3-11 muliggør at man kan finde frem til eller aflede de nucleinsyrer, der har essentielle strukturelementer fælles med de to virus.20 ° C). This presentation as recognized from the complete genome by comparing FIG. 1B with FIG. 3-11 enables one to find or deduce the nucleic acids that have essential structural elements in common with the two viruses.
25 Komparative studier, som ligeledes har muliggjort, at man opnår resultater for kerneproteiner, i det følgende benævnt gag-proteiner, samt kappeproteiner, i det følgende benævnt env-proteiner, er ligeledes beskrevet i den ovennævnte EP ansøgning nr. 87/400.151.4. Disse resultater viser, at kerneproteiner (gag-proteiner) i HIV-2 udviser mindre tydelige forskelle fra 30 celler fra virus HIV-1 end kappeproteinerne (env-proteinerne). Totalt set har env-proteinerne i HIV-2 vist sig at udvise ekstremt svage om ikke ikke-eksisterende immunologiske ligheder med de korresponderende env-proteiner i HIV-1 virus.Comparative studies which have also enabled results to be obtained for nuclear proteins, hereinafter referred to as gag proteins, as well as envelope proteins, hereinafter referred to as env proteins, are also described in the above-mentioned EP Application No. 87 / 400,151.4. . These results show that nuclear proteins (gag proteins) in HIV-2 exhibit less distinct differences from 30 cells of virus HIV-1 than the envelope proteins (env proteins). Overall, the env proteins in HIV-2 have been shown to exhibit extremely weak, non-existent immunological similarities to the corresponding env proteins in the HIV-1 virus.
8 DK 174705 B18 DK 174705 B1
Derimod har komparative studier mellem strukturerne af cDNA-sekvenserne i HIV-2 og SIV-virus muliggjort, at man kan fastlægge visse fælles karakteristika, som viser sig på proteinniveauet.By contrast, comparative studies between the structures of the cDNA sequences in HIV-2 and SIV virus have enabled the identification of certain common characteristics that appear at the protein level.
55
Totalt set udviser proteinerne fra HIV-2 og SIV-1 vigtige immunologiske ligheder.Overall, the proteins from HIV-2 and SIV-1 exhibit important immunological similarities.
Det væsentligste kappeprotein fra HIV-2 har vist sig at være nærmere be-10 slægtet med det væsentligste kappeglycoprotein fra SIV i immunologisk henseende end med det væsentligste kappeglycoprotein fra HIV-1.The major envelope protein of HIV-2 has been found to be more closely related to the major envelope glycoprotein of SIV in immunological terms than to the essential envelope glycoprotein of HIV-1.
Disse konstateringer viser sig ikke blot hvad angår molekylvægtene: 130-140 kd for de væsentligste glycoproteiner fra HIV-2 og SIV overfor ca. 110 15 kd for det væsentligste kappeglycoprotein fra HIV-1, men også hvad angår de immunologiske egenskaber, eftersom udtagne serumprøver fra patienter inficeret med HIV-2 og især antistoffer dannet mod gp140 fra HIV-2 genkender gp140 fra SIV-1 mac, mens de samme serumprøver og de samme HIV-2-antistoffer ved tilsvarende forsøg ikke genkender gp110 fra 20 HIV-1. Men anti-HIV-1 serum, som aldrig har reageret med gp140 fra HIV-2, udfælder et protein på 26 kd mærket med 35S-cystein, der er indeholdt i HIV-2 ekstrakter.These findings are not only apparent in terms of molecular weights: 130-140 kd for the major HIV-2 and SIV glycoproteins versus ca. 110 15 kd for the major envelope glycoprotein of HIV-1, but also in terms of its immunological properties, since sampled serum samples from patients infected with HIV-2 and especially antibodies produced against gp140 from HIV-2 recognize gp140 from SIV-1 mac, while the same serum samples and the same HIV-2 antibodies in similar experiments do not recognize gp110 from 20 HIV-1. But anti-HIV-1 serum, which has never reacted with gp140 from HIV-2, precipitates a 26 kd protein labeled with 35S-cysteine contained in HIV-2 extracts.
Det væsentligste kerneprotein fra HIV-2 synes at udvise en middelmole-25 kylvægt på ca. 26 000, som ligger imellem molekylvægten for p25 fra HIV-1 og p27 fra SIV.The major core protein from HIV-2 appears to exhibit an average molecular weight of approx. 26,000, which is between the molecular weight of p25 from HIV-1 and p27 from SIV.
Disse observationer stammer fra forsøg gennemført på virusekstrakter opnået ud fra HIV-2 isoleret fra en af de ovennævnte patienter. Lignende 30 resultater er opnået med virusekstrakter af HIV-2 isoleret fra en anden patient.These observations stem from trials conducted on virus extracts obtained from HIV-2 isolated from one of the above patients. Similar results have been obtained with viral extracts of HIV-2 isolated from another patient.
9 DK 174705 B19 DK 174705 B1
Mere omfattende forsøg har fået opfinderne til at erkende en første klasse af peptider, der har aminosyresekvenser, der enten er identiske eller nært beslægtede med sekvenser indeholdt i det indre af strukturerne for gag-proteinerne for HIV-2 eller fra SIV, og endog fra HIV-1. Disse pep-5 tider er særligt anvendelige til diagnose af en infektion hos mennesker | med HIV-2 virus eller en variant deraf.More extensive experiments have led the inventors to recognize a first class of peptides having amino acid sequences that are either identical or closely related to sequences contained within the interior of the structures of the gag proteins for HIV-2 or from SIV, and even from HIV. -1. These pep-5 times are particularly useful for diagnosing an infection in humans | with HIV-2 virus or a variant thereof.
| i På denne baggrund kan fremgangsmåden og midlet ifølge opfindelsen anvendes til diagnose in vitro af antistoffer rettet mod HIV-2 virus eller va- 10 rianter deraf, især i biologiske prøver, navnlig serumprøver fra patienter, der har været udsat for en infektion med HIV-2 virus, idet visse af disse i ! peptider muliggør en særlig tydelig diskrimination mellem infektioner forår- saget af HIV-2 virus og HIV-1 virus.| Against this background, the method and agent of the invention can be used to diagnose in vitro antibodies against HIV-2 viruses or variants thereof, especially in biological samples, especially serum samples from patients who have been infected with HIV infection. 2 viruses, some of which in! peptides allow a particularly clear discrimination between infections caused by HIV-2 virus and HIV-1 virus.
15 Disse omfattende studier har ligeledes ført til muligheden for at syntetisere peptider, der er immunogene eller kan gøres immunogene, og som udviser strukturelle karakteristika, der muliggør at de in vivo kan inducere dannelsen af antistoffer, der er i stand til at genkende env-proteiner både fra HIV-1 og HIV-2, og i det mindste for en del af disse peptiders vedkom- 20 mende at binde sig både til HIV-1 virus og til HIV-2 virus, specielt med det formål at neutralisere disse. Anvendelsen af disse typer peptider er således særligt indiceret til fremstilling af aktive bestanddele af vacciner mod HIV-virus, og dermed imod AIDS.These extensive studies have also led to the possibility of synthesizing peptides that are immunogenic or can be immunogenic and which exhibit structural characteristics that enable them to induce in vivo the formation of antibodies capable of recognizing env proteins. both from HIV-1 and HIV-2, and at least for some of these peptides to bind both to HIV-1 virus and to HIV-2 virus, specifically for the purpose of neutralizing them. Thus, the use of these types of peptides is particularly indicated for the preparation of active ingredients of vaccines against HIV virus, and thus against AIDS.
25 For nedenfor at beskrive de aminosyrerester, der indgår i strukturen af de omhandlede peptider, anvender man for aminosyren den entydige internationale nomenklatur, der betegner hver naturlig aminosyre med et stort bogstav ifølge den nedenstående tabel: 30 M Methionin L Leucin I Isoleucin V Valin DK 174705 B1 i 10 i F Phenylalanin S Serin P Prolin T Threonin 5 A Alanin Y Tyrosin I H Histidin | Q Glutamin 10 N Asparagin K Lysin D Asparaginsyre E Glutaminsyre C Cystein 15 W Tryptophan R Arginin G Glycin Når en aminosyre p.g.a. sin position midt i aminosyrekæden, der er karak-20 teristisk for et givet peptid, kan have flere betydninger, kan den enten være betegnet med en bindestreg hvis dens betydning kan være vilkårlig, eller ved et lille bogstav, når denne aminosyre kan udvise et antal foretrukne betydninger, og dette antal imidlertid altid er større end 1. I sidstnævnte tilfælde er de mulige betydninger af det lille bogstav altid angivet i 25 forbindelse med det peptid, som det tilhører.To describe below the amino acid residues included in the structure of the peptides, one uses for the amino acid the unique international nomenclature which denotes each natural amino acid with a capital letter according to the table below: 30 M Methionine L Leucine I Isoleucine V Valin DK 174705 B1 i 10 i F Phenylalanine S Serine P Prolin T Threonine 5 A Alanine Y Tyrosine IH Histidine | Q Glutamine 10 N Asparagine K Lysine D Aspartic acid E Glutamic acid C Cysteine 15 W Tryptophan R Arginine G Glycine When an amino acid p.g.a. its position in the middle of the amino acid chain characteristic of a given peptide may have several meanings, it may either be denoted by a hyphen if its meaning may be arbitrary, or by a lower case when that amino acid may exhibit a number preferred meanings, however, and this number is always greater than 1. In the latter case, the possible meanings of the lowercase letter are always given in connection with the peptide to which it belongs.
For at lette læsningen bliver disse peptider også betegnet med en forkortelse env efterfulgt af et tal, ved reference til de indeholdte aminosyrer efter omstændighederne, i env-proteinerne i visse typer af HIV-1, HIV-2 eller 30 SIV. Dette omtales nærmere nedenfor.To facilitate reading, these peptides are also denoted by an abbreviation env followed by a number, by reference to the contained amino acids, as appropriate, in the env proteins of certain types of HIV-1, HIV-2 or 30 SIV. This is discussed in more detail below.
I de efterfølgende definitioner betegner grupperne X enten en fri NHr gruppe eller en amideret gruppe især med en eller to alkylgrupper inde- 11 DK 174705 B1 holdende 1 -5 carbonatomer, eller en peptidgruppe, der indeholder 1 -5 aminosyrer, hvor den N-terminale aminosyre selv udviser en fri NH2-gruppe eller amidgruppe, som angivet tidligere, og grupperne Z betegner enten en fri -OH-gruppe eller alkoxygruppe og indeholder så en alkylgrup-5 pe omfattende 1-5 carbonatomer, eller en peptidgruppe omfattende 1-5 aminosyrer, hvis C-terminale aminosyre selv udviser en fri -OH-gruppe eller alkoxygruppe, som angivet ovenfor, idet de grupper på 1-5 aminosyrer, der eventuelt indgår i X eller Z eller i begge er sådanne, hvis tilstedeværelse ikke er inkompatibel med bevarelsen i hovedsagen af de immuno-10 logiske, eventuelt immunogene egenskaber ved de peptider, som de er fjernet fra.In the following definitions, the groups X denote either a free NH 1 group or an amidated group especially with one or two alkyl groups containing 1 -5 carbon atoms, or a peptide group containing 1 -5 amino acids, wherein the N-terminal amino acid itself exhibits a free NH 2 group or amide group, as indicated previously, and groups Z denote either a free -OH group or alkoxy group and then contain an alkyl group comprising 1-5 carbon atoms, or a peptide group comprising 1-5 amino acids if C-terminal amino acid itself exhibits a free -OH group or alkoxy group, as indicated above, the groups of 1-5 amino acids optionally included in X or Z or both being those whose presence is incompatible with conservation essentially the immunological, possibly immunogenic properties of the peptides from which they are removed.
Peptiderne ifølge opfindelsen, som har immunologiske egenskaber fælles med antigener fra HIV-2 og for visse af dem endvidere med antigener fra 15 HIV-1 eller varianter deraf, er kendetegnet ved, at de ligeledes har en peptidstruktur fælles med antigener fra SIV. Med fordel omfatter disse peptider normalt højst 40 aminosyrerester.The peptides of the invention, which have immunological properties in common with antigens from HIV-2 and, for some of them, furthermore with antigens from HIV-1 or variants thereof, are characterized in that they also have a peptide structure in common with antigens from SIV. Advantageously, these peptides usually comprise a maximum of 40 amino acid residues.
Foretrukne peptider er de følgende: 20 env1Preferred peptides are the following: 20 env1
XRV-AIEKYL-DQA-LN-WGCAFRQVCZXRV-AIEKYL-DQA-LN-WGCAFRQVCZ
env2 25 X-LE-AQI-QQEKNMYELQKLNZ env3env2 25 X-LE-AQI-QQEKNMYELQKLNZ env3
XELGDYKLVEITPIG-APT-KR----ZXELGDYKLVEITPIG-APT-KR ---- Z
30 env430 env4
X—VTV-Y G VP-WK-AT-LF C A-ZX — VTV-Y G VP-WK-AT-LF C A-Z
, DK 174705 B1 12 env5 X—QE-L-NVTE-F-W-NZ env6, DK 174705 B1 12 env5 X — QE-L-NVTE-F-W-NZ env6
5 XL—S-KPCVKLTPLCV--Z5 XL — S-KPCVKLTPLCV - Z
env7env7
| X—N-S-IT--C-K—Z| X-N-S-IT - C-C-Z
10 env8 X-l—YC-P-G-A-L-C-N-TZ env9Env8 X-1 — YC-P-G-A-L-C-N-TZ env9
X-----A-C-----W-ZX ----- ----- A-C, W-Z
1515
env1Qenv1Q
X-G-DPE---NC-GEF-YCN-----NZX-G-DPE-NC --- GEF-YCN ----- NZ
env11env11
20 X—C-IKQ-I----G—YZX-C-IKQ-I ---- G-YZ
Nærmere bestemt angår opfindelsen følgende peptider: env1 25 XRV-AIEKYL-DQA-LN-WGCAFRQVCZ env2 X-LE-AQIQQEKNMYELQKLNZ 30 env3More specifically, the invention relates to the following peptides: env1 XRV-AIEKYL-DQA-LN-WGCAFRQVCZ env2 X-LE-AQIQQEKNMYELQKLNZ env3
XELGDYKLVEITPIG-APT-KR----ZXELGDYKLVEITPIG-APT-KR ---- Z
env4 13 DK 174705 B1 X—VTV-YGVP-W-AT-LF CA-Z env5 X—E--L-NVTE-F-W-NZ 5 env6 XL—S-KPCVKL-PLC—Z env7 10 X—N-S-l— C-K—Z env8env4 13 DK 174705 B1 X — VTV-YGVP-W-AT-LF CA-Z env5 X — E - L-NVTE-FW-NZ 5 env6 XL — S-KPCVKL-PLC — Z env7 10 X — NS1— CK —Z env8
X-l—YC-P-G-A-L-C-N-TZX-L-YC-P-G-A-L-C-N-TZ
15 env915 env9
X----A-C----W-ZX ---- C ---- A-W-Z
env10env10
Z-G-DPE----NC-GEF-VC---NZZ-G ---- DPE-NC-GEF-VC --- NZ
20 env1120 env11
X—C-l-Q-l----G—YZX-C-L-Q-L-G ---- YZ
Særligt fordelagtige peptider svarende til de foregående udviser de føl-25 gende formler: env1 XRVTAIEKYLQDQARLNSWGCAFRQVCZ, eller XRVTAIEKYLKDQAQLNAWGCAFRQVCZ 30 env2Particularly advantageous peptides similar to the above exhibit the following formulas: env1 XRVTAIEKYLQDQARLNSWGCAFRQVCZ, or XRVTAIEKYLKDQAQLNAWGCAFRQVCZ 30 env2
XSLEQAQIQQEKNMYELQKLNSWZ, eller XLLEEAQIQQEKNMYELQKLNSWZXSLEQAQIQQEKNMYELQKLNSWZ, or XLLEEAQIQQEKNMYELQKLNSWZ
14 DK 174705 B1 env3 ! XELGDYKLVEITPIGFAPTKEKRYSSAHZ, eller14 DK 174705 B1 env3! XELGDYKLVEITPIGFAPTKEKRYSSAHZ, or
5 XELGDYKLVEITPIGLAPTNVKRYTTG-Z5 XELGDYKLVEITPIGLAPTNVKRYTTG-Z
Man bemærker, at peptiderne env1. env2. env3 bekræfter den meget store lighed mellem HIV-2 og SIV-1. Faktisk er det første peptid inkluderet i HIV-2 genomet og det andet i SIV-1 genomet.It is noted that the peptides env1. env2. env3 confirms the very similarity between HIV-2 and SIV-1. In fact, the first peptide is included in the HIV-2 genome and the second in the SIV-1 genome.
10 env410 env4
XabsdVTVeYGVPfWogAThiLFCAjZ, hvori bogstaverne a-j og o kan have følgende betydninger: 15XabsdVTVeYGVPfWogAThiLFCAjZ, in which the letters a-j and o can have the following meanings: 15
a er C, E eller D b er T, K, D, N eller I c er Q eller L d er Y eller W 20 e er F eller Y f er T, V eller A g er N eller E h er I eller T i er P eller T 25 j er T eller S o er K eller Ra is C, E or D b is T, K, D, N or I c is Q or L d is Y or W 20 e is F or Y f is T, V or A g is N or E h is I or T i is P or T 25 j is T or S o is K or R
env5env5
XabcoEdeLfNVTEgFhiWjNZ, 30XabcoEdeLfNVTEgFhiWjNZ, 30
hvori bogstaverne a-j og o kan have de følgende betydninger: a er D eller Pwherein the letters a-j and o can have the following meanings: a is D or P
15 DK 174705 B115 DK 174705 B1
b er D eller N c er Y eller Pb is D or N c is Y or P
d er I, V, I eller L 5 e er T, V, E eller A f er V, G eller E eller -g er A, N, G eller S h er D eller N i er A eller M 10 j er N,K eller E o er Q eller Sd is I, V, I or L 5 e is T, V, E or A f is V, G or E or -g is A, N, G or S h is D or N i is A or M 10 j is N, K or E o are Q or S
env6 XLabcSd KPCVKLoP LCuef KZ, 15 hvori bogstaverne a-f, o og u kan have følgende betydninger:env6 XLabcSd KPCVKLoP LCuef KZ, 15 in which the letters a-f, o and u can have the following meanings:
a er F eller W b er E eller D 20 c er T eller Q d er I eller L e er A, S eller T f er M eller L o er T eller S 25 u er V eller Ia is F or W b is E or D 20 c is T or Q d is I or L e is A, S or T f is M or L o is T or S 25 u is V or I
env7env7
XabCNxSylocdCeKfghiZ, 30 hvori bogstaverne a-i og x og y kan have følgende betydninger:XabCNxSylocdCeKfghiZ, 30 in which the letters a-i and x and y can have the following meanings:
a er N eller T eller I b er H eller S eller Na is N or T or I b is H or S or N
16 DK 174705 B116 DK 174705 B1
c er E eller Q d er S, A eller Cc is E or Q d is S, A or C
e er D eller P 5 f er H, Veller D g er Y eller S h er W eller F i er D eller E X er T eller R 10 y er Veller Ae is D or P 5 f is H, Veller D g is Y or S h is W or F i is D or E X is T or R 10 y is Veller A
0 er T eller Q0 is T or Q
env8env8
XalbcdYCxPeGfAgLhCiNjTZ, 15 hvori bogstaverne a-k og x kan have følgende betydninger:XalbcdYCxPeGfAgLhCiNjTZ, wherein the letters a-k and x can have the following meanings:
a er A eller P b er R eller P 20 c er F, I eller C d er R eller H e er P eller A f er Y eller F g er L eller I 25 h er R eller Ka is A or P b is R or P 20 c is F, I or C d is R or H e is P or A f is Y or F g is L or I 25 h is R or K
1 er - eller N1 is - or N
j er D eller K x er A eller Tj is D or K x is A or T
30 env930 env9
XwabcxyAdCefghizWjkZ, hvori bogstaverne a-k og x-z kan have følgende betydninger: 17 DK 174705 B1XwabcxyAdCefghizWjkZ, in which the letters a-k and x-z can have the following meanings: 17 DK 174705 B1
a er K eller - eller E b er R eller -5 c er P eller M eller I d er Weller H eller Y e er W eller N eller T eller R f er F eller Ia is K or - or E b is R or -5 c is P or M or I d is Weller H or Y e is W or N or T or R f is F or I
g er K eller S eller N eller G 10 h er G eller R eller E i er - eller A eller T j er K eller N eller D eller S k er D eller A eller N eller K eller E w er N, D eller I 15 x er R eller G eller K y er Q eller K eller R z er K eller E eller Q eller Ng is K or S or N or G 10 h is G or R or E i is - or A or T j is K or N or D or S k is D or A or N or K or E w is N, D or In 15 x, R or G or K y is Q or K or R z is K or E or Q or N
env10 20 XaGbDPEcdefghNCiGEFjYCokxImnNZ, hvori bogstaverne a-n og x kan have følgende betydninger:env10 20 XaGbDPEcdefghNCiGEFjYCokxImnNZ, in which the letters a-n and x can have the following meanings:
a er K eller - eller G 25 b er S eller G eller -c er V eller I d er A eller V eller T e er Y eller T eller M eller F f er M eller H 30 g er W eller S h erT eller F i er R eller G j er L eller Fa is K or - or G 25 b is S or G or -c is V or I d is A or V or T e is Y or T or M or F f is M or H 30 g is W or S h isT or F i is R or G j is L or F
18 DK 174705 B118 DK 174705 B1
0 er N eller K k er M eller S0 is N or K k is M or S
1 er W eller Q eller K eller G 5 m er F eller L1 is W or Q or K or G 5 m is F or L
n er L eller F x er T eller S eller Nn is L or F x is T or S or N
i env11 10 XabcdwCeloQflxgyhizGjklYZ, hvori bogstaverne a-l og w-z kan have følgende betydninger:in env11 10 XabcdwCeloQflxgyhizGjklYZ, in which the letters a-l and w-z can have the following meanings:
a er R eller T eller S eller N 15 b er N eller I c er Y eller T d er A eller L eller V e er H eller Ra is R or T or S or N 15 b is N or I c is Y or T d is A or L or V e is H or R
i f er I eller Fin f is I or F
20 g er T eller M20 g is T or M
h er H eller Q eller A i er K eller E j er R eller K k er N eller A 25 I er V eller M w er P eller Q x er N eller K y er W eller V z er V eller T eller K 30 o er K eller Rh is H or Q or A i is K or E j is R or K k is N or A 25 I is V or M w is P or Q x is N or K y is W or V z is V or T or K O is K or R
Det skal generelt bemærkes, at de aminosyrer, der har en entydig betydning (og som således er repræsenteret af et stort bogstav svarende det 19 DK 174705 B1 internationale nomenklatur), og som indgår i de definitioner for peptiderne ifølge opfindelsen, der er angivet ovenfor, viser sig at korrespondere med identiske aminosyrer placeret i samme rækkefølge i de korresponderende sekvenser i mindst en HIV- eller SIV-1 virus.It should generally be noted that the amino acids which have a unique meaning (and thus represented by a capital letter corresponding to the international nomenclature) and which are included in the definitions of the peptides of the invention set forth above, are found to correspond to identical amino acids located in the same order in the corresponding sequences of at least one HIV or SIV-1 virus.
55
Positionerne af disse sekvenser er understreget og fordelt inde i aminosy-resekvenserne i eny-proteinerne for henholdsvis HIV-2 ROD (CNCM nr. I-532) og HIV-1 BRU (CNCM nr. I-232) vist på fig. 2. Rækkefølgen af ami-nosyrerne i env- og gag-proteinerne for henholdsvis SIV-1 mac (CNCM nr.The positions of these sequences are underlined and distributed within the amino acid sequences of the eny proteins for HIV-2 ROD (CNCM No. I-532) and HIV-1 BRU (CNCM No. I-232), respectively, shown in FIG. 2. The order of the amino acids in the env and gag proteins for SIV-1 mac, respectively (CNCM no.
10 1-521) og af HIV-2 ROD vist på fig. 3 og fig. 4.10-1-521) and of the HIV-2 ROD shown in FIG. 3 and FIG. 4th
De ubrudte linier, der er vist på visse steder af disse sekvenser, skal understrege, at visse aminosyrer indeholdt i disse sekvenser er frivilligt udeladt på præsentationen for at muliggøre, at identiske aminosyrer bringes 15 på linie (markeret med en stjerne), eller at to vertikale punkter på en og samme vertikale linie i de korresponderende proteinsekvenser fra på den ene side HIV-1 og HIV-2 og på den anden side SIV og HIV-2.The unbroken lines shown at certain sites of these sequences should emphasize that certain amino acids contained in these sequences are voluntarily omitted in the presentation to allow identical amino acids to be aligned (marked with an asterisk) or vertical points on one and the same vertical line in the corresponding protein sequences from on the one hand HIV-1 and HIV-2 and on the other hand SIV and HIV-2.
Bortset fra de ovennævnte peptider angår opfindelsen ligeledes peptider, 20 der er modificeret ved indsætning og/eller udeladelse og/eller substitution af en eller flere aminosyrer, så længe de antigene eller immunogene egenskaber af disse peptider ikke modificeres, eller at genkendelsesegenskaberne for antigenet eller antistoffet hos disse peptider ikke er væsentligt modificeret.Apart from the above peptides, the invention also relates to peptides modified by insertion and / or deletion and / or substitution of one or more amino acids, as long as the antigenic or immunogenic properties of these peptides are not modified, or that the recognition properties of the antigen or antibody are of these peptides are not substantially modified.
25 I en særligt foretrukken udførelsesform angår opfindelsen peptider, der har immunologiske egenskaber fælles med peptidskelettet i kappeglycoprotei-net fra virus af klasse HIV-2, idet disse peptider indeholder et antal amino-syrerester, der ikke overstiger 40.In a particularly preferred embodiment, the invention relates to peptides that have immunological properties in common with the peptide backbone of the HIV-2 class virus glycoprotein, these peptides containing a number of amino acid residues not exceeding 40.
3030
Disse foretrukne peptider ifølge opfindelsen udviser følgende sekvenser: env1 20 DK 174705 B1These preferred peptides of the invention exhibit the following sequences: env1
RVTAIEKYLQDQARLNSWGCAFRQVCRVTAIEKYLQDQARLNSWGCAFRQVC
AIEKYLQDQAIEKYLQDQ
RVSAIEKYLKDQAQLNAWGCAFRQVCRVSAIEKYLKDQAQLNAWGCAFRQVC
AIEKYLKDQAIEKYLKDQ
5 env25 env2
SLEQAQIQQEKNMVELQKLNSWSLEQAQIQQEKNMVELQKLNSW
QIQQEKNQIQQEKN
LLEEAQIQQEKNMYELQKLNSWLLEEAQIQQEKNMYELQKLNSW
10 env310 env3
ELGDYKLVEITPIGFAPTKEKRYSSAHELGDYKLVEITPIGFAPTKEKRYSSAH
YKLVEITPIGFAPTKEKYKLVEITPIGFAPTKEK
ELGDYKLVEITPIGLAPTNVKRYTTG-ELGDYKLVEITPIGLAPTNVKRYTTG-
15 YKLVEITPIGLAPTNVK15 YKLVEITPIGLAPTNVK
env4env4
CTQYVTVFYGVPTWKNATIPLFCAT VTVF Y G VPTWKN ATCTQYVTVFYGVPTWKNATIPLFCAT VTVF Y G VPTWKN AT
20 CIQYVTVFYGVPAWRNATIPLFCAT VTVFYGVPAWRNAT20 CIQYVTVFYGVPAWRNATIPLFCAT VTVFYGVPAWRNAT
EKLWVTVYYGVPVWKEATTTLFCAS VTVYY G VP VWKE ATEKLWVTVYYGVPVWKEATTTLFCAS VTVYY G VP VWKE AT
25 E DL WVTVYY G VP VWKEATTTLF C AS VTVYY G VP VWKE AT25 E DL WVTVYY G VP VWKEATTTLF C AS VTVYY G VP VWKE AT
D N L WVTVYY G VP VWKEATTTLFC AS VTVYYGVPVWKEATD N L WVTVYY G VP VWKEATTTLFC AS VTVYYGVPVWKEAT
30 env530 env5
DDYQEITL-NVTEAFDAWNNDDYQEITL-NVTEAFDAWNN
L-NVTEAFL-NVTEAF
21 DK 174705 B121 DK 174705 B1
DDYSELAL-NVTESFDAWENDDYSELAL-NVTESFDAWEN
L-NVTESFL-NVTESF
PNPQEWLVNVTENFNMWKNPNPQEWLVNVTENFNMWKN
LVNVTENFLVNVTENF
5 PNPQEIELENVTEGFNMWKN LENVTEGF5 PNPQEIELENVTEGFNMWKN LENVTEGF
PNPQEIALENVTENFNMWKNPNPQEIALENVTENFNMWKN
LENVTENFLENVTENF
10 env610 env6
ETSIKPCVKLTPLCVAMK ETSIKPCVKLSPLCITMR DQSLKPCVKLTPLCVSLK DQSLKPCVKLTPLCVTLN 15 PCVKLTPLCVETSIKPCVKLTPLCVAMK ETSIKPCVKLSPLCITMR DQSLKPCVKLTPLCVSLK DQSLKPCVKLTPLCVTLN 15 PCVKLTPLCV
env7env7
NHCNTSVITESCDNHCNTSVITESCD
NTSVITNTSVIT
20 NHCNTSVIQECCD NTSVIQ20 NHCNTSVIQECCD NTSVIQ
TSCNTSVITQACPTSCNTSVITQACP
NTSVITNTSVIT
INCNTSVITQACP 25 NTSVITINCNTSVITQACP 25 NTSVIT
INCNTSAITQACPINCNTSAITQACP
NTSAITNTSAIT
env8env8
30 YCAPPGYALLRC-NDT YCAPAGFAILKCNNKT YCAPAGFAILKCNDKK YCAPAGFAILKCRDKK30 YCAPPGYALLRC-NDT YCAPAGFAILKCNNKT YCAPAGFAILKCNDKK YCAPAGFAILKCRDKK
22 DK 174705 B1 env922 DK 174705 B1 env9
NKRPRQAWCWFKG-KWKD NERPKQAWCRFGG-NWKE 5 N-MRQAHCNISRAKWNA D-IRRAYCTINETEWDK l-IGQAHCNISRAQWSKNKRPRQAWCWFKG-KWKD NERPKQAWCRFGG-NWKE 5 N-MRQAHCNISRAKWNA D-IRRAYCTINETEWDK l-IGQAHCNISRAQWSK
env10env10
10 KGSDPEVAYMWTNCRGEFLYCNMTWFLN NCRGEFLYCN10 KGSDPEVAYMWTNCRGEFLYCNMTWFLN NCRGEFLYCN
GG-DPEVTFMWTNCRGEFLYCKMNWFLNGG-DPEVTFMWTNCRGEFLYCKMNWFLN
NCRGEFLYCKNCRGEFLYCK
-GGDPEIVTHSFNCGGEFFYCNSTQLFN 15 NCGGEFFYCN-GGDPEIVTHSFNCGGEFFYCNSTQLFN 15 NCGGEFFYCN
-GGDPEITTHSFNCRGEFFYCNTSKLFN-GGDPEITTHSFNCRGEFFYCNTSKLFN
NCRGEFFYCNNCRGEFFYCN
-GGDPEITTHSFNCGGEFFYCNTSGLFN-GGDPEITTHSFNCGGEFFYCNTSGLFN
NCGGEFFYCNNCGGEFFYCN
20 env1120 env11
RNYAPCHIKQIINTWHKVGRNVYRNYAPCHIKQIINTWHKVGRNVY
CHIKQIICHIKQII
RNYVPCHIRQIINTWHKVGKNVY 25 CHIRQIIRNYVPCHIRQIINTWHKVGKNVY 25 CHIRQII
TITLPCRIKQFINMWQEVGKAMYTITLPCRIKQFINMWQEVGKAMY
CRIKQFICRIKQFI
SITLPCRIKQIINMWQKTCKAMY 30 CRIKQIISITLPCRIKQIINMWQKTCKAMY 30 CRIKQII
NITLQCRIKQIIKMVAGR-KAIYNITLQCRIKQIIKMVAGR-Kaiy
CRIKQIICRIKQII
23 DK 174705 B123 DK 174705 B1
Peptiderne ifølge opfindelsen kan med fordel fremstilles ved de klassiske metoder inden for peptidsyntese. Denne syntese kan gennemføres i homogen opløsning eller i fast fase.The peptides of the invention can advantageously be prepared by the classical methods of peptide synthesis. This synthesis can be carried out in homogeneous solution or in solid phase.
5 F.eks. kan man anvende synteseteknikken i homogen opløsning beskrevet af HOUBEN-WEYL i "Methode der Organischen Chemie", Ed. E. Wunsch, vol. 15-1 og II., THIEME, Stuttgart 1974.For example. For example, the homogeneous solution synthesis technique described by HOUBEN-WEYL in "Methode der Organischen Chemie", Ed. E. Wunsch, Vols 15-1 and II., THIEME, Stuttgart 1974.
Ved denne metode kondenserer man successivt to og to de successive 10 aminoacylgrupper i den krævede rækkefølge eller man kondenserer ami-noacylgrupper og foruddannede fragmenter, der allerede indeholder flere aminoacylgrupper i den rigtige rækkefølge, eller flere således tidligere fremstillede fragmenter, idet det er underforstået, at man forinden har ta-! get højde for at beskytte alle de reaktive grupper på disse aminoacylgrup- 15 per eller fragmenter, bortset fra de aminogrupper i den ene og de carbo-xylgrupper i den anden eller vice-versa, som normalt skal indgå i dannelsen af peptidbindinger, især efter aktivering af carboxylgruppen ved velkendte metoder inden for peptidsyntese. Som variant kan man udnytte koblingsreaktioner, hvor der gøres brug af klassiske koblingsmidler af car-20 bodiimidtypen, som f.eks. 1-ethyl-3-(3-dimethyl-amino-propyl)-carbodiimid.In this method, two and two successive 10 aminoacyl groups are successively condensed in the required order or condensed aminoacyl groups and pre-formed fragments which already contain several aminoacyl groups in the correct order, or more thus previously prepared fragments, it being understood that one has before taken! to protect all the reactive groups on these aminoacyl groups or fragments, except the amino groups in one and the carboxyl groups in the other or vice versa, which should normally be included in the formation of peptide bonds, especially after activation of the carboxyl group by well known methods in peptide synthesis. As a variant, coupling reactions can be utilized using classical coupling agents of the carbodiimide type, such as e.g. 1-ethyl-3- (3-dimethylamino-propyl) carbodiimide.
Når den anvendte aminoacylgruppe udviser en supplerende syrefunktion, især når der er tale om glutaminsyre, kan disse være grupper være beskyttet, f.eks. med t-butylester-grupper.When the aminoacyl group used exhibits an additional acidic function, especially in the case of glutamic acid, these may be groups protected, e.g. with t-butyl ester groups.
25 Ved progressive synteser aminosyre efter aminosyre begynder syntesen fortrinsvis med en kondensation af den C-terminale aminosyre med den aminosyre, der svarer til det nabostillede aminoacyl i den ønskede sekvens og så fremdeles indtil den N-terminale aminosyre. Ved anden fore-trukken teknik ifølge opfindelsen anvender man metoden beskrevet af 30 R.D. Merrifield, "Solid phase peptide synthesis" (J. Am. Soc., 45, 2149-2154).For progressive synthesizing amino acid after amino acid, the synthesis preferably begins with condensation of the C-terminal amino acid with the amino acid corresponding to the adjacent aminoacyl in the desired sequence and then still up to the N-terminal amino acid. In the second preferred technique according to the invention, the method described by 30 R.D. Merrifield, "Solid phase peptide synthesis" (J. Am. Soc., 45, 2149-2154).
24 DK 174705 B1 i24 DK 174705 B1 i
For at fremstille en peptidkæde efter Merrifield-metoden anvender man en meget porøs polymer resin, hvorpå man fikserer den første C-terminale aminosyre i kæden. Denne aminosyre fikseres på resinet ved hjælp af sin carboxylgruppe, mens dens aminogruppe er beskyttet, f.eks.To prepare a peptide chain according to the Merrifield method, a very porous polymeric resin is used to fix the first C-terminal amino acid in the chain. This amino acid is fixed to the resin by its carboxyl group while its amino group is protected, e.g.
5 med en t-butyloxycarbonylgruppe.5 with a t-butyloxycarbonyl group.
, Når den første C-terminale aminosyre således er fikseret på resinen, fjer ner man beskyttelsesgruppen på aminogruppen og ved at vaske resinen med en syre.Thus, when the first C-terminal amino acid is fixed on the resin, the protecting group on the amino group is removed and by washing the resin with an acid.
10 Når beskyttelsesgruppen for aminogruppen er t-butyloxycarbonyl, kan den fjernes ved behandling af resinen med trifluoreddikesyre.When the amino group protecting group is t-butyloxycarbonyl, it can be removed by treating the resin with trifluoroacetic acid.
Man kobler derpå den anden aminosyre, der leverer det andet aminoacyl i 15 den tilstræbte sekvens ud fra den C-terminale aminoacyl, til den debeskyt-tede aminogruppe i den første C-terminale aminosyre fikseret til resinen.The second amino acid which delivers the second aminoacyl in the desired sequence from the C-terminal aminoacyl is then coupled to the de-protected amino group of the first C-terminal amino acid fixed to the resin.
Fortrinsvis er carboxylgruppen i den anden aminosyre aktiveret, f.eks. med dicyclohexylcarbodiimid, og aminogruppen er beskyttet, f.eks. med t-20 butyloxycarbonyl.Preferably, the carboxyl group of the second amino acid is activated, e.g. with dicyclohexylcarbodiimide and the amino group is protected, e.g. with t-butyloxycarbonyl.
Man opnår således den første del af den tilstræbte peptidkæde, der omfatter to aminosyrer, og hvis terminale aminogruppe er beskyttet. Som tidligere debeskytter man aminogruppen og man kan derpå fortsætte med fikse-25 ring af det tredje aminoacyl under analoge betingelser med dem, der anvendtes ved additionen af den anden C-terminale aminosyre.Thus, the first portion of the desired peptide chain comprising two amino acids and whose terminal amino group is protected is obtained. As before, the amino group is deprotected and it is then possible to proceed with fixation of the third aminoacyl under analogous conditions to those used in the addition of the second C-terminal amino acid.
Man fikserer således den ene efter den anden af de aminosyrer, der skal udgøre peptidkæden, til aminogruppen, der hver gang forinden er de-30 beskyttet, til den allerede dannede del af peptidkæden, som er bundet til resinen.Thus, one after the other of the amino acids which are to form the peptide chain is fixed to the amino group, each time previously de-protected, to the already formed part of the peptide chain which is bound to the resin.
25 DK 174705 B1 Når hele den ønskede peptidkæde er dannet, fjerner man beskyttelsesgrupperne på de forskellige aminosyrer, der udgør peptidkæden, og man frigør peptidet fra resinen, f.eks. ved hjælp af flussyre.When the entire desired peptide chain is formed, the protecting groups of the various amino acids constituting the peptide chain are removed and the peptide is released from the resin, e.g. using hydrofluoric acid.
5 Opfindelsen angår ligeledes vandopløselige oligomere af de ovennævnte monomere peptider. Oligomeriseringen kan fremkalde en forøgelse af immunogen iciteten af de monomere peptider ifølge opfindelsen. Uden at denne talangivelse skal opfattes som begrænsende, kan man ikke desto mindre nævne, at disse oligomere f.eks. kan indeholde 2-10 monomeren-10 heder.The invention also relates to water-soluble oligomers of the above-mentioned monomeric peptides. The oligomerization can induce an increase in the immunogenicity of the monomeric peptides of the invention. Without limiting this number, it can nevertheless be mentioned that these oligomers e.g. may contain 2-10 monomers-10 moieties.
Monomerenhedeme, der indgår i denne oligomer, udgøres enten alle af polypeptidet fra sekvens 1 eller af polypeptidet fra sekvens 2 eller af det ene eller det andet af disse polypeptider.The monomer units included in this oligomer are either all of the polypeptide of sequence 1 or of the polypeptide of sequence 2 or of one or the other of these polypeptides.
1515
Man kan også til gennemførelse af oligomeriseringen anvende enhver sædvanlig polymerisationsteknik inden for peptidkemien, idet denne polymerisation gennemføres, indtil man opnår en oligomer eller polymer, der | indeholder det krævede antal monomere enheder til opnåelse af den øn- 1 20 skede immunogenicitet.Also, to carry out the oligomerization, any conventional polymerization technique within the peptide chemistry can be employed, this polymerization being carried out until an oligomer or polymer is obtained which | contains the required number of monomeric units to achieve the desired immunogenicity.
En metode til oligomerisation eller polymerisation af den monomere består i at omsætte denne med et tværbindingsmiddel, såsom glutaraldehyd.One method of oligomerization or polymerization of the monomer consists in reacting it with a crosslinking agent such as glutaraldehyde.
25 Man kan også anvende andre oligomerisations- eller koblingsmetoder, f.eks. den metode, der gør brug af successive koblinger af monomerenhederne ved hjælp af deres terminale carboxyl- og aminogrupper i nærværelse af bifunktionelle homo- eller heterokoblingsmidler.Other oligomerization or coupling methods, e.g. the method utilizing successive couplings of the monomer units by their terminal carboxyl and amino groups in the presence of bifunctional homo or heterocoupling agents.
30 Man kan ligeledes til fremstilling af molekyler omfattende en eller flere enheder af de ovennævnte 17 aminosyrer anvende de genteknologiske metoder, der gør brug af mikroorganismer, der er transformeret med en given 26 DK 174705 B1 nucleinsyre, og som omfatter de passende korresponderende nucleotidsekvenser.Also, for the production of molecules comprising one or more units of the above 17 amino acids, the genetic engineering methods utilizing microorganisms transformed with a given nucleic acid which comprise the appropriate corresponding nucleotide sequences can be used.
I forbindelse med opfindelsen er der tilvejebragt nucleinsyrer, der indehol-5 der en eller flere sekvenser afledt af cDNA-sekvensen for HIV-2 ROD-virus. Disse sekvenser, der er markeret med den nummerering, der figurerer på den ovenfor beskrevne sekvens, koder for visse interessante peptider ifølge opfindelsen.In the invention, nucleic acids are provided which contain one or more sequences derived from the cDNA sequence of HIV-2 ROD virus. These sequences, which are marked by the numbering which appears on the sequence described above, encode certain interesting peptides of the invention.
10 Sekvens, der koder for env1 nucleotid 7850 - 7927 - - - env2 - 8030-8095 - - - env3 - 7601 -7636 - - - env4 - 6170-6247 - - - env5 - 6294-6349 15 - - - - env6 - 6392 - 6445 . . . env7 - 6724 - 6763 - - - env8 - 6794-6838 - - - env9 - 7112-7162 - - - env10- 7253-7336 20 - --- env11- 7358-7426Sequence encoding env1 nucleotide 7850 - 7927 - - - env2 - 8030-8095 - - - env3 - 7601 -7636 - - - env4 - 6170-6247 - - - env5 - 6294-6349 15 - - - - env6 - 6392 - 6445. . . env7 - 6724 - 6763 - - - env8 - 6794-6838 - - - env9 - 7112-7162 - - - env10-7253-7336 20 - --- env11-7358-7426
De korresponderende nucleinsyrer fra SIV-virus indeholder ligeledes en eller flere sekvenser afledt af cDNA fra SIV-1 -virus. Disse sekvenser, der koder for peptiderne env1-env11 kan lokaliseres på fig. 3 ved sammenlig-25 ning med de korresponderende sekvenser, der er beskrevet for HIV-2.The corresponding nucleic acids from SIV virus also contain one or more sequences derived from cDNA from SIV-1 virus. These sequences encoding the env1-env11 peptides can be located in FIG. 3 by comparison with the corresponding sequences described for HIV-2.
Når de immunogene midler er konjugeret med et bæremolekyle som angivet i krav 24 opnås dette ved kovalent kobling af peptiderne ifølge opfindelsen (eller de nævnte oligomere) til naturlige eller syntetiske fysiologisk 30 acceptable og ikke-toksiske bærermolekyler, ved hjælp af komplementære reaktive grupper, der henholdsvis bæres af bærermolekylet og peptidet.When the immunogenic agents are conjugated to a carrier molecule as claimed in claim 24, this is accomplished by covalently coupling the peptides of the invention (or said oligomers) to natural or synthetic physiologically acceptable and nontoxic carrier molecules by complementary reactive groups which are carried by the carrier molecule and the peptide, respectively.
Eksempler på passende grupper er illustreret i det følgende: i 27 DK 174705 B1Examples of suitable groups are illustrated in the following: in 27 DK 174705 B1
Som eksempler på bærermolekyler eller makromolekylære bærere, der ! kan indgå i konstitutionen af konjugater ifølge opfindelsen, kan man nævnte naturlige proteiner, såsom tetanus anatoxin, ovalbumin, serumalbuminer, hæmocyaminer etc.As examples of carrier molecules or macromolecular carriers that! may be included in the constitution of conjugates according to the invention, one may mention natural proteins such as tetanus anatoxin, ovalbumin, serum albumin, hemocyamines etc.
55
Som eksempler på syntetiske bærermolekyler kan man f.eks. nævne poly-lysiner eller poly(D-L-alanin)-poly(L-lysin).As examples of synthetic carrier molecules, e.g. mention poly-lysines or poly (D-L-alanine) -poly (L-lysine).
i i I litteraturen nævnes andre typer anvendelige makromolekylære bærere, 10 og disse udviser i reglen en molekylvægt på over 20 000.In the literature, other types of useful macromolecular carriers are mentioned, 10 and these generally exhibit a molecular weight in excess of 20,000.
For at syntetisere konjugateme ifølge opfindelsen kan man anvende i og for sig kendte metoder, f.eks. som beskrevet af FRANTZ and ROBERTSON, Infect, and Immunity, 33, 193-198 (1981), eller P.E. KAUFFMAN, 15 Applied and Environmental Microbiology, (October 1981), vol. 42, nr. 4, 611-614 idet man anvender et passende peptid og bærermolekyle.In order to synthesize the conjugates according to the invention, methods known per se can be used, e.g. as described by FRANTZ and ROBERTSON, Infect, and Immunity, 33, 193-198 (1981), or P.E. KAUFFMAN, 15 Applied and Environmental Microbiology, (October 1981), Vol. 42, No. 4, 611-614 using an appropriate peptide and carrier molecule.
I praksis anvender man med fordel som koblingsmiddel f.eks. følgende forbindelser: glutaraldehyd, ethylchlorformiat, vandopløselige carbodiimi-20 der, såsom N-ethyl-N' -(3-dimethylaminopropyl)-carbodiimid, HCl, diiso-cyanater, bis-diazobenzidin, di- og trichlor-s-triaziner, cyanogenbromid samt de koblingsmidler, der er nævnt i Scand. J. Immunol., (1978), vol. 8, p. 7-23 AVRAMEAS, TERNYNCK, GUESDON).In practice, it is advantageously used as a coupling means, e.g. the following compounds: glutaraldehyde, ethyl chloroformate, water-soluble carbodiimides, such as N-ethyl-N '- (3-dimethylaminopropyl) carbodiimide, HCl, diisocyanates, bis-diazobenzidine, di- and trichloro-s-triazines, cyanogen bromide and the coupling means mentioned in Scand. J. Immunol. (1978), Vol. 8, pp. 7-23 AVRAMEAS, TERNYNCK, GUESDON).
25 Man kan anvende en hvilken som helst koblingsproces, hvor der gøres brug af en eller flere reaktive grupper i peptidet og en eller flere reaktive grupper i bærermolekyleme. Med fordel drejer det sig om carboxyl- og aminogrupper, der kan give anledning til en koblingsreaktion i nærvær af et koblingsmiddel af den type, der anvendes ved proteinsyntese, f.eks. 1-30 ethyl-3-(3-dimethylaminopropyl)-carbodiimid, N-hydroxybenzotriazol etc.Any coupling process using one or more reactive groups in the peptide and one or more reactive groups in the carrier molecules can be used. Advantageously, these are carboxyl and amino groups which may give rise to a coupling reaction in the presence of a coupling agent of the type used in protein synthesis, e.g. 1-30 Ethyl 3- (3-dimethylaminopropyl) carbodiimide, N-hydroxybenzotriazole, etc.
Man kan også anvende glutaraldehyd, især når det drejer sig om indbyrdes at forbinde aminogrupper, der henholdsvis sidder på peptidet og bærermolekylet.Glutaraldehyde can also be used, especially when it comes to interconnecting amino groups sitting on the peptide and the carrier molecule, respectively.
28 DK 174705 B128 DK 174705 B1
Peptiderne ifølge opfindelsen udviser antigeniske egenskaber. De kan således anvendes ved diagnostiske metoder til detektering af en infektion med HIV-2 virus.The peptides of the invention exhibit antigenic properties. Thus, they can be used in diagnostic methods to detect an infection with HIV-2 virus.
55
Som nævnt tidligere har undersøgelser gjort det muligt at skelne mellem to grupper af peptider, der kan anvendes ved fremgangsmåder til detektering af antistoffer mod HIV-2 virus i humane biologiske væsker, især serum eller cephalospinalvæske.As mentioned earlier, studies have made it possible to distinguish between two groups of peptides that can be used in methods for detecting antibodies to HIV-2 virus in human biological fluids, especially serum or cephalospinal fluid.
1010
En gruppe omfatter peptider, der nærmere bestemt svarer til de peptider, der er placeret i den transmembrane del og ved enden af den udvendige del af kappeproteinet. Disse proteiner er ovenfor betegnet env1. env2 og env3. De muliggør en specifik genkendelse af tilstedeværelsen af antistof-15 fer mod HIV-2 og muliggør således en diskrimination mellem overståede ! eller tilstedeværende infektioner p.g.a. HIV hos en person, nærmere en bestemt en diskrimination mellem infektioner, som var provokeret af HIV-2 og infektioner, som var provokeret af HIV-1.One group comprises peptides which are more specifically similar to those peptides located in the transmembrane portion and at the end of the outer portion of the envelope protein. These proteins are referred to above as env1. env2 and env3. They enable a specific recognition of the presence of antibodies against HIV-2 and thus enable discrimination between the above! or infections present due to HIV in a person, more specifically a discrimination between infections provoked by HIV-2 and infections provoked by HIV-1.
20 Opfindelsen angår ligeledes et antigent middel, der indeholder mindst et af de ovennævnte peptider eller mindst en oligomer af et sådant peptid, som er ejendommeligt ved, at det har evnen til at kunne genkendes af serum af human oprindelse, der indeholder antistoffer mod HIV-2.The invention also relates to an antigenic agent containing at least one of the above peptides or at least one oligomer of such peptide, which is characterized in that it has the ability to be recognized by human origin serum containing HIV antibodies. 2nd
25 Opfindelsen angår endvidere en fremgangsmåde til in vitro at diagnosticere et eller flere peptider ifølge opfindelsen for at kunne detektere antistoffer mod HIV-2 i biologiske væsker, især human serum.The invention further relates to a method for in vitro diagnosing one or more peptides of the invention in order to detect antibodies to HIV-2 in biological fluids, especially human serum.
Mere generelt omfatter in vitro diagnosemetoden følgende trin: 30More generally, the in vitro diagnostic method comprises the following steps:
Den biologiske væske bringes i kontakt med peptiderne, i 29 DK 174705 B1 den eventuelle tilstedeværelse af et peptid-antistofkompleks detekteres ved fysiske eller kemiske metoder i den biologiske væske.The biological fluid is contacted with the peptides, in the presence of a peptide-antibody complex, if any, is detected by physical or chemical methods in the biological fluid.
I en foretrukken udførelsesform for fremgangsmåden ifølge opfindelsen 5 gennemføres detekteringen af antigen-antistofkomplekset ved hjælp af immunoenzymatiske prøver (af typen ELISA), immunofluorescensmetoder (af typen IFA), radioimmunologiske metoder (af typen RIA) eller radioim-munopræcipiteringsmetoder (af typen RIPA). Således angår opfindelsen ligeledes ethvert peptid ifølge opfindelsen, der er mærket ved hjælp af en 10 passende markør, f.eks. en enzymatisk, fluorescerende eller radioaktiv markør.In a preferred embodiment of the method of the invention 5, the detection of the antigen-antibody complex is performed by immunoenzymatic (ELISA type), immunofluorescence methods (IFA type), radioimmunological methods (RIA type) or radioimmunoprecipitation methods (type RIPA). Thus, the invention also relates to any peptide of the invention labeled by a suitable marker, e.g. an enzymatic, fluorescent or radioactive marker.
Sådanne metoder omfatter f.eks. følgende trin: 15 afsætning af fastlagte mængder af et peptidholdigt middel ifølge opfindelsen i brøndene i en mikrotiterplade, anbringelse af stigende fortyndinger af det serum, der skal diagnosticeres, i brøndene, 20 inkubering af mikrotiterpladen og gentagne skylninger af denne, indføring i brøndene af et mærket antistof mod immunglobulinerne i blodet, hvor mærkningen af disse antistoffer kan være gennemført ved hjælp af et 25 enzym valgt blandt enzymer, der er i stand til at hydrolysere et substrat ved at modificere absorptionen af dettes stråling, i det mindste ved en fastlagt bølgelængde, detektering ved sammenligning med en kontrolprøve af den hydrolyserede 30 mængde substrat.Such methods include e.g. the following steps: depositing determined amounts of a peptide-containing agent of the invention into the wells of a microtiter plate, placing increasing dilutions of the serum to be diagnosed in the wells, incubating the microtiter plate and repeated rinses thereof, introducing into the wells labeled antibody to the immunoglobulins in the blood, wherein the labeling of these antibodies may be accomplished by an enzyme selected from enzymes capable of hydrolyzing a substrate by modifying the absorption of its radiation, at least at a determined wavelength, detection by comparison with a control sample of the hydrolyzed 30 amount of substrate.
Opfindelsen angår ligeledes kit til in vitro diagnose af tilstedeværelsen af antistoffer mod HIV-2 virus i et biologisk medium, som omfatter: 30 DK 174705 B1 et peptidisk middel ifølge opfindelsen, reagenser til tilvejebringelse af en sammensætning af mediet, der er hen-5 sigtsmæssig for gennemførelsen af den immunologiske reaktion, reagenser, der muliggør en detektering af antigen-antistofkomplekset dan-j net ved den immunologiske reaktion. Sådanne reagenser kan ligeledes være forsynet med en markør eller være i stand til at kunne genkendes af 10 et mærket reagens. Dette er især tilfældet, når det ovennævnte peptidiske middel ikke er mærket.The invention also relates to in vitro diagnostic kits for the presence of antibodies to HIV-2 virus in a biological medium which comprises: reagents for providing a composition of the medium which is suitable for carrying out the immunological reaction, reagents which enable detection of the antigen-antibody complex are formed by the immunological reaction. Such reagents may also be provided with a marker or be capable of being recognized by a labeled reagent. This is especially the case when the above peptidic agent is not labeled.
- en biologisk referencevævsvæske fri for antistoffer, der genkendes af det ovennævnte peptidiske middel.- a biological reference tissue fluid free of antibodies recognized by the above peptidic agent.
1515
Der kan dannes antistoffer mod peptiderne ifølge opfindelsen, og denne produktion er ikke begrænset til polyklonale antistoffer.Antibodies to the peptides of the invention can be formed and this production is not limited to polyclonal antibodies.
Den finder ligeledes anvendelse på et hvilket som helst monoklonalt anti-20 stof produceret af ethvert hybridom, der kan dannes ved klassiske metoder ud fra miltceller fra et dyr, især mus eller rotter, der er immuniseret med et af peptiderne ifølge opfindelsen, og celler fra en passende myelo- i macellelinie, og som kan udvælges pga. sin evne til at producere mo- ' noklonale antistoffer, der genkender det peptid, der oprindeligt blev an-25 vendt til immuniseringen af dyret.It also finds application to any monoclonal antibody produced by any hybridoma that can be formed by classical methods from spleen cells of an animal, especially mice or rats immunized with one of the peptides of the invention, and cells from a suitable myeloid cell line that can be selected for its ability to produce monoclonal antibodies that recognize the peptide originally used for the immunization of the animal.
Opfindelsen angår endvidere immunogene midler til fremstilling af vacciner, hvis aktive bestanddel består af mindst et peptid ifølge opfindelsen eller en oligomer af et sådant peptid eller et peptid, der er konjugeret med 30 et bæremolekyle, og som er ejendommeligt ved, at de inducerer dannelsen af antistoffer mod disse peptider i tilstrækkelig mængde til også at in-hibere proteiner fra HIV-2 retrovirus, ja endog selve HIV-2 retrovirus i association med en farmaceutisk acceptabel bærer.The invention further relates to immunogenic agents for the preparation of vaccines whose active ingredient consists of at least one peptide of the invention or an oligomer of such peptide or peptide conjugated to a carrier molecule which is peculiar in that it induces the formation of antibodies against these peptides in sufficient quantity to also inhibit HIV-2 retrovirus proteins, even HIV-2 retroviruses themselves, in association with a pharmaceutically acceptable carrier.
I DK 174705 B1 i 31In DK 174705 B1 in 31
De immunogene midler til fremstilling af vacciner omfatter fordelagtigt nærmere bestemt mindst et af de peptider, der ovenfor betegnedes env4. env5. env6. env7. env8. env9. env10. envil eller blandinger heraf. Blandt 5 disse peptider, der er velegnede til at udgøre aktive bestanddele i vacciner, er visse særligt foretrukne, fordi de udviser en basal aminosyrestruk-tur, der svarer til regioner i kappeglycoproteiner, der udviser en høj grad af konservering, ikke blot i HIV-2 og i SIV, men også i HIV-1 virus. Disse peptider, der er særligt foretrukne, er de peptider, der betegnes env4. og visse 10 af peptiderne env5. env6 og env10.Specifically, the immunogenic agents for the preparation of vaccines comprise at least one of the peptides referred to above env4. env5. env6. env7. env8. env9. env10. envelope or mixtures thereof. Among these five peptides, which are suitable for constituting active ingredients in vaccines, some are particularly preferred because they exhibit a basic amino acid structure corresponding to regions of envelope glycoproteins exhibiting a high degree of conservation, not only in HIV. 2 and in SIV, but also in HIV-1 virus. These peptides, which are particularly preferred, are those peptides designated env4. and certain 10 of the peptides env5. env6 and env10.
I en foretrukken udførelsesform for opfindelsen vælges de immunogene peptider eller fragmenter af disse, der er velegnede som aktive bestanddele i vacciner, blandt de formler, der svarer til sekvenserne som i kappegly-15 coproteinerne fra HIV-2, SIV og HIV-1, udviser en aminosyrehomologi der er over 50%, og som hører til den eksterne del af kappen af virus, og som er fri for eller næsten fri for deletioner, og som indeholder cysteinrester, der fremmer stabiliteten af bindingerne og dannelsen af "hårnåle".In a preferred embodiment of the invention, the immunogenic peptides or fragments thereof which are suitable as active ingredients in vaccines are selected from the formulas corresponding to the sequences exhibited in the envelope glycoproteins of HIV-2, SIV and HIV-1. an amino acid homology exceeding 50%, which belongs to the external part of the envelope of viruses, which is free or almost free of deletions, and which contains cysteine residues which promote the stability of the bonds and the formation of "hairpins".
20 De efterfølgende peptider tilhører denne kategori af foretrukne peptider.The following peptides belong to this category of preferred peptides.
env4env4
XVTV-YGVP-W-ATZXVTV-YGVP-W-ATZ
25 env525 env5
XL-NVTE-FZXL NVTE-FZ
env6env6
XKPCVKL-PLC-ZXKPCVKL-PLC-Z
30 env730 env7
XN-S-I-ZXN-S-I-Z
32 DK 174705 B1 env1032 DK 174705 B1 env10
XNC-GEF-YC-ZXNC-GEF-YC-Z
env11env11
5 XC-I-Q-IZ5 XC-I-Q-IZ
Fordelagtige farmaceutiske midler består af injicerbare opløsninger, suspensioner eller liposomer, der indeholder en effektiv dosis af mindst et produkt ifølge opfindelsen. Fortrinsvis tilvejebringes disse opløsninger, 10 suspensioner eller liposomer i en steril isotonisk vandfase, fortrinsvis en fysiologisk saltopløsning eller glucoseopløsning.Advantageous pharmaceutical agents consist of injectable solutions, suspensions or liposomes containing an effective dose of at least one product of the invention. Preferably, these solutions, suspensions or liposomes are provided in a sterile isotonic aqueous phase, preferably a physiological saline or glucose solution.
Der anvendes nærmere bestemt sådanne suspensioner, opløsninger eller liposomer, der er i stand til at indgives ved intradermisk, intramuskulær 15 eller subkutan injektion eller ved kopsætning.Specifically, such suspensions, solutions or liposomes are capable of being administered by intradermal, intramuscular or subcutaneous injection or by co-administration.
Farmaceutiske midler, kan også indgives på anden måde, især oralt.Pharmaceutical agents may also be administered by other means, especially orally.
Farmaceutiske midler, der kan anvendes som vacciner, kan for at være 20 effektive ved dannelsen af antistoffer mod HIV-2 virus f.eks. indgives i doser på10-500 pg/kg af peptiderne ifølge opfindelsen, fortrinsvis 50-100 pg/kg.Pharmaceutical agents which can be used as vaccines may be effective in producing antibodies against HIV-2 virus, e.g. is administered at doses of 10-500 pg / kg of the peptides of the invention, preferably 50-100 pg / kg.
Disse doser er kun anført som eksempler og skal ikke opfattes som be-25 grænsende.These doses are given by way of example only and should not be construed as limiting.
Som anført ovenfor kan de forskellige nærmere definerede peptider omfatte modifikationer, der ikke har til virkning, at de immunologiske egenskaber modificeres på fundamental vis. De ækvivalente peptider, der derved op-30 nås, er omfattet af de efterfølgende patentkrav. Som eksempel på ækvivalente peptider kan man nævne peptider, hvis strukturer svarer til cDNA regioner i andre varianter af HIV-2, SIV eller HIV-1, når disse regioner bringes på linie under de betingelser, der svarer til de ovenfor angivne i 33 DK 174705 B1 forbindelse med HIV-2 ROD, SIV og HIV-1 BRU. Som eksempler på andre af disse peptider kan man nævne peptider, hvis struktur svarer til de regioner i cDNA, der er deponeret ved CNCM, især med numrene I-502, I-642 (HIC-2 IRMO) og I-643 (HIV-2 EHO) samt i visse tilfælde varianter af 5 HIV-1, der er deponeret ved CNCM med numrene I-232, I-240, 1-241, I-550 og 1-551.As noted above, the various more defined peptides may comprise modifications which do not have the effect of fundamentally modifying the immunological properties. The equivalent peptides thus obtained are covered by the following claims. As an example of equivalent peptides, mention may be made of peptides whose structures correspond to cDNA regions in other variants of HIV-2, SIV or HIV-1 when these regions are aligned under the conditions similar to those described above in 33 DK 174705 B1 association with HIV-2 ROD, SIV and HIV-1 BRU. As examples of other of these peptides, mention may be made of peptides whose structure corresponds to the regions of the cDNA deposited by CNCM, especially with numbers I-502, I-642 (HIC-2 IRMO) and I-643 (HIV 2 EHO) as well as, in some cases, variants of 5 HIV-1 deposited by CNCM with numbers I-232, I-240, 1-241, I-550 and 1-551.
Peptiderne ifølge opfindelsen kan også defineres ved de efterfølgende formler, hvori X, Z og bindestregerne har de ovenfor angivne betydnin-10 ger:The peptides of the invention may also be defined by the following formulas wherein X, Z and the hyphens have the above meanings:
XRV-AIEKYL-DQA-LN-WGCAFRQVCZXRV-AIEKYL-DQA-LN-WGCAFRQVCZ
XAIEKYL-DZXAIEKYL-DZ
15 X-LE-AQIQQEKNMYELOQKLNSWZ XQIQQEKNZ15 X-LE-AQIQQEKNMYELOQKLNSWZ XQIQQEKNZ
XELGDYKLVEITPIG-APT—KR--ZXELGDYKLVEITPIG-APT-KR - Z
XYKLVEITPIG-APT—KRZXYKLVEITPIG-APT-KRZ
2020
X—VTV-Y G VP-W-AT--LF C A-Z XVTV-YGVP-W—ATZX — VTV-Y G VP-W-AT - LF C A-Z XVTV-YGVP-W — ATZ
X—E--L-NVTE-F--W-NZ 25 XL-NVTE-FZX — E - L-NVTE-F - W-NZ 25 XL-NVTE-FZ
XL—S-KPCVKL-PLC—Z XKPCVKL-PLC-Z XS-KPC VKL-P LC-Z 30XL — S-KPCVKL-PLC — Z XKPCVKL-PLC-Z XS-KPC VKL-P LC-Z 30
X—N-S-l—C-Z XN-S-I-ZX — N-S-1 — C-Z XN-S-I-Z
34 DK 174705 B134 DK 174705 B1
XYC-P-G-A-L-C-N-TZXYC-P-G-A-L-C-N-TZ
X----a-C-----W~ZX ---- ----- A-C ~ W Z
5 NKRPRQAWCWFKG-KWKD5 NKRPRQAWCWFKG-KWKD
X-G-DPE-----NC-GEF-YC-----NZX-G ----- DPE-NC-GEF-YC ----- NZ
X—C-l-Q-l----G—YZX-C-L-Q-L-G ---- YZ
1010
Opfindelsen angår ligeledes foruden de allerede beskrevne SIV peptider proteiner, som kodes for af cDNA fra SIV virus. De angår ligeledes proteiner fra enhver immunologisk virus, der i immunologisk henseende er nært i beslægtet med SIV-1 mac, specielt enhver virus, hvis kappeproteiner og - 15 glycoproteiner udviser immunologisk overkrydsning, og hvis cDNA udviser i en homologiprocent på mindst 95%, fortrinsvis mest 98%.The invention also relates, in addition to the already described SIV peptide proteins, which are encoded by cDNA from the SIV virus. They also apply to proteins of any immunological virus that are immunologically closely related to SIV-1 mac, especially any virus whose envelope proteins and - 15 glycoproteins exhibit immunological cross-over and whose cDNA exhibits a homology percentage of at least 95%, preferably most 98%.
Specielt angår opfindelsen kappeproteiner og -glycoproteiner, der kodes for af env-qenet. og som er vist på fig. 3, 1 20In particular, the invention relates to envelope proteins and glycoproteins encoded by the env gene. and shown in FIG. 3, 1 20
Aminosyrerne i de ovennævnte SIV-proteiner er vist på linie med aminosy-resekvenserne fra de korresponderende proteiner fra HIV-2 virus; de verti-| kale punkter, der figurerer mellem de to sekvenser, svarer til aminosyrer, ! der er fælles for proteinerne fra de to virus.The amino acids of the above SIV proteins are shown in line with the amino acid sequences of the corresponding proteins of the HIV-2 virus; the verti- | bald dots that appear between the two sequences correspond to amino acids,! common to the proteins of the two viruses.
25 I · ' De cDNA sekvenser der koder for de ovennævnte proteiner, er vist pa fig.The cDNA sequences encoding the aforementioned proteins are shown in FIG.
ΊΒ.ΊΒ.
Disse cDNA sekvenser lokaliseret ved den nummerering, der figurerer på de tidligere beskrevne sekvenser (figur 1B) er følgende: 30 - sekvens der koder for GAG, nucleotider 551-2068 - ........POL, " 1726-4893 - ........Q, " 4826-5467 35 DK 174705 B1 - ...... " X, " 5298- 5633 - ........R, *' 5637-5939 | - ........F, " 8569-9354 5 - ........TAT-1, " 5788-6084 - ........ART-1, " 6014-6130 - ........TAT-2, " 8296-8391 - ........ART-2, " 8294-8548 - ........ENV, " 6090-8732 10These cDNA sequences located by the numbering that appear on the previously described sequences (Figure 1B) are as follows: 30 - GAG Coding Sequence, Nucleotides 551-2068 - ........ POL, "1726-4893 - ........ Q, "4826-5467 35 DK 174705 B1 - ......" X, "5298-5633 - ........ R, * '5637-5939 | - ........ F, "8569-9354 5 - ........ TAT-1," 5788-6084 - ........ ART-1, "6014-6130 - ........ TAT-2, "8296-8391 - ........ ART-2," 8294-8548 - ........ ENV, "6090-8732 10
Opfindelsen angår således naturligvis de tidligere beskrevne proteiner, hvad enten de er opnået ud fra SIV virus, eller de er fremstillet af syntetisk vej, især ved hjælp af de metoder, der er nævnt ovenfor i forbindelse med syntese af mindre peptider.The invention thus, of course, relates to the previously described proteins, whether obtained from SIV virus or made from synthetic pathway, especially by the methods mentioned above in connection with the synthesis of smaller peptides.
1515
Opfindelsen angår ligeledes anvendelsen af de foregående proteiner til diagnose af den eventuelle tilstedeværelse af antistoffer rettet mod HIV-2 proteiner, ja endog mod hele HIV-2 eller for visse af disses vedkommende anvendelsen til diagnose af en infektion pga. en HIV virus. Proteinerne 20 ENV anvendes fortrinsvis til specifik diagnose af en infektion med HIV-2 eller en variant deraf, og sommetider til diagnose af en infektion af HIV-2 eller HIV-1.The invention also relates to the use of the foregoing proteins for the diagnosis of the possible presence of antibodies directed against HIV-2 proteins, or even to all of HIV-2 or, for some of them, the use for the diagnosis of an infection due to an HIV virus. The proteins 20 ENV are preferably used for the specific diagnosis of an infection with HIV-2 or a variant thereof, and sometimes for the diagnosis of an infection of HIV-2 or HIV-1.
Opfindelsen angår således ligeledes en in vitro diagnosemetode til detek-25 tering af antistoffer mod HIV-2 og eventuelt mod HIV-1 i biologiske væsker og især i human serum. Sådanne fremgangsmåder, der er anvendelige til anvendelse af de ovennævnte SIV-proteiner som diagnostiske proteiner, er beskrevet tidligere.Thus, the invention also relates to an in vitro diagnostic method for detecting antibodies to HIV-2 and, optionally, to HIV-1 in biological fluids and especially in human serum. Such methods useful for using the above SIV proteins as diagnostic proteins have been described previously.
30 Opfindelsen angår således også kits til in vitro diagnose af tilstedeværelsen af antistoffer mod HIV-2 virus og også i tilfælde mod HIV-1 virus i et biologisk medium. Sådanne kits, der gør brug af de ovennævnte peptider, er ligeledes beskrevet ovenfor.Thus, the invention also relates to kits for in vitro diagnosis of the presence of antibodies against HIV-2 virus and also in cases against HIV-1 virus in a biological medium. Such kits utilizing the above peptides are also described above.
36 DK 174705 B136 DK 174705 B1
Endvidere angår opfindelsen immunogene midler til produktion af vacciner, hvis aktive bestanddel består af i det mindste en del af proteinet ENV fra SIV-virus, idet dette protein også kan være konjugeret med et bærer-5 molekyle. Disse immunogene midler inducerer dannelsen af antistoffer mod dette peptid i tilstrækkelig mængde til at inhibere proteiner fra HIV-2 retrovirus eller endog selve HIV-2 retrovirus.Furthermore, the invention relates to immunogenic agents for the production of vaccines whose active ingredient consists of at least a portion of the protein ENV from the SIV virus, this protein also being conjugated to a carrier molecule. These immunogenic agents induce the formation of antibodies against this peptide in sufficient quantity to inhibit proteins from HIV-2 retroviruses or even HIV-2 retroviruses themselves.
10 i j10 i j
Claims (29)
Priority Applications (1)
Application Number | Priority Date | Filing Date | Title |
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DK200201277A DK175879B1 (en) | 1987-01-16 | 2002-08-30 | NEw peptide(s) with immunological properties of HIV-2 envelope protein - have the structure of simian immune deficiency virus proteins, useful in diagnosis and of vaccine components |
Applications Claiming Priority (8)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US07/003,764 US5051496A (en) | 1986-01-22 | 1987-01-16 | Peptides related to human immunodeficiency virus II (HIV-2) |
US376487 | 1987-01-16 | ||
FR8701739 | 1987-02-11 | ||
FR8701739A FR2610632B1 (en) | 1987-02-11 | 1987-02-11 | CHARACTERISTIC PEPTIDES OF HUMAN IMMUNODEFICIENCY RETROVIRUSES (HIV VIRUSES) THEIR APPLICATIONS IN THE DIAGNOSIS OF INFECTIONS DUE TO CERTAIN OF THESE VIRUSES AND, IF NECESSARY, IN VACCINATION AGAINST AIDS |
FR8705398A FR2614025B1 (en) | 1987-04-15 | 1987-04-15 | PEPTIDES LIKELY TO BE RECOGNIZED BY ANTIBODIES INDUCED AGAINST HUMAN IMMUNODEFICIENCY RETROVIRUSES (HIV VIRUSES) THEIR APPLICATIONS IN THE DIAGNOSIS OF INFECTIONS DUE TO CERTAIN VIRUSES AND, IF NECESSARY, IN VACCINATION AGAINST AIDS |
FR8705398 | 1987-04-15 | ||
FR8800025 | 1988-01-05 | ||
PCT/FR1988/000025 WO1988005440A1 (en) | 1987-01-16 | 1988-01-15 | Peptides having immunological properties 2-hiv-2 |
Publications (3)
Publication Number | Publication Date |
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DK513388D0 DK513388D0 (en) | 1988-09-15 |
DK513388A DK513388A (en) | 1988-11-16 |
DK174705B1 true DK174705B1 (en) | 2003-09-29 |
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Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
DK198805133A DK174705B1 (en) | 1987-01-16 | 1988-09-15 | Peptides having immunological properties corresponding to HIV-2 viruses, antigens and immunogenic agents containing such peptides, and methods and kits for an in vitro diagnosis of HIV-2 |
Country Status (9)
Country | Link |
---|---|
EP (1) | EP0283327B1 (en) |
JP (5) | JP2948823B2 (en) |
AT (1) | ATE154808T1 (en) |
AU (1) | AU608294B2 (en) |
DE (1) | DE3855947T2 (en) |
DK (1) | DK174705B1 (en) |
ES (1) | ES2104556T3 (en) |
GR (1) | GR3024823T3 (en) |
WO (1) | WO1988005440A1 (en) |
Families Citing this family (35)
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SE8701628D0 (en) * | 1987-04-16 | 1987-04-16 | Erling Norrby | MEANS OF ANALYSIS MM |
AU2914889A (en) * | 1987-08-28 | 1989-04-17 | Board Of Regents, The University Of Texas System | Prophylaxis and therapy of acquired immunodeficiency syndrome |
US5780038A (en) * | 1987-11-16 | 1998-07-14 | Roche Diagnostic Systems, Inc. | HIV-2 envelope polypeptides |
ES2054769T3 (en) * | 1987-11-16 | 1994-08-16 | Hoffmann La Roche | RECOMBINANT HIV-2 POLYPEPTIDES. |
EP0327801A1 (en) * | 1988-01-08 | 1989-08-16 | Deutsches Primatenzentrum Gesellschaft Mbh | HIV-2-type retroviruses of primates, vaccines, diagnostic and pharmaceutical compositions |
JP3093763B2 (en) * | 1988-06-09 | 2000-10-03 | インスティチュート・パスツール | Precursor antigen of envelope glycoprotein of human retrovirus HIV-2, antigen having immunological homology thereto, method for preparing these antigens and application to diagnosis |
FR2632644B1 (en) * | 1988-06-10 | 1994-11-04 | Pasteur Institut | PRECURSOR ANTIGENS OF HUMAN HIV-2 RETROVIRUS ENVELOPE GLYCOPROTEINS AND ANTIGENS HAVING AN IMMUNOLOGICAL PARENT TO THESE LATTERS. PREPARATION OF THESE ANTIGENS. APPLICATION TO DIAGNOSIS |
GB2220939B (en) * | 1988-06-10 | 1992-02-26 | Medical Res Council | Peptide fragments of hiv and their use in vaccines and diagnosis |
IL90553A0 (en) * | 1988-06-13 | 1990-01-18 | Us Health | Protein and coding sequence for detection and differentiation of siv and hiv-2 group of viruses |
FR2635532B1 (en) * | 1988-07-29 | 1992-05-22 | Pasteur Institut | HYBRID RECOMBINANT HBSAG PARTICLES: MORPHOLOGICAL CHARACTERISTICS OF THE HBSAG ANTIGEN CONTAINING 1 IMMUNOGENIC SEQUENCE INDUCING NEUTRALIZING ANTIBODIES DIRECTED AGAINST HIV OR LIKELY TO BE RECOGNIZED BY SUCH ANTIBODIES; NUCLEOTIDE SEQUENCES ENCODING FOR SUCH PARTICLES; VACCINES CONTAINING THEM |
EP0362927A3 (en) * | 1988-10-06 | 1990-11-14 | Akzo N.V. | Synthetic polypeptides immunochemically reactive with hiv antibodies |
CA2003383A1 (en) * | 1988-11-23 | 1990-05-23 | Sushil G. Devare | Synthetic dna derived recombinant hiv antigens |
US5260189A (en) * | 1988-12-20 | 1993-11-09 | Immunodiagnostics, Inc. | Synthetic HIV-like peptides their compositions and uses |
DE69026569T2 (en) * | 1989-05-12 | 1996-09-05 | Pasteur Institut | ANTIGENS OF A TRANSMEMBRANE ENVELOPE GLYCOPROTEIN OF A HUMAN RETROVIRUS OF THE TYPE HIV-2 AND IMMUNOLOGELALLY RELATED ANTIGENS |
FR2646854A1 (en) * | 1989-05-12 | 1990-11-16 | Pasteur Institut | Antigens of the envelope transmembrane glycoprotein of a HIV-2 type human retrovirus, antigens exhibiting an immunological relationship with them |
EP0400245B1 (en) * | 1989-05-31 | 1995-12-20 | Institut Pasteur | Proteins and glycoproteins of the HIV-2 EHO retrovirus antibodies directed against them - application for the diagnosis |
FR2647809B1 (en) * | 1989-06-02 | 1991-09-20 | Pasteur Institut | OLIGONUCLEOTIDE PRIMERS FOR THE AMPLIFICATION OF THE GENOME OF HIV-1, HIV-2 AND SIV RETROVIRUSES AND THEIR APPLICATIONS TO IN VITRO DIAGNOSIS OF INFECTIONS DUE TO THESE VIRUSES |
US7022814B1 (en) | 1992-01-21 | 2006-04-04 | Institut Pasteur And Institut National De La Sante Et De La Recherche Medicale | Nucleotide sequences derived from the genome of retroviruses of the HIV-1, HIV-2 and SIV type, and their uses in particular for the amplification of the genomes of these retroviruses and for the in vitro diagnosis of the diseases due to these viruses |
CA2585164C (en) * | 1989-06-02 | 2010-02-02 | Institut Pasteur | Nucleotides sequences derived from the genome of type hiv-1, hiv-2 and siv retroviruses, and their applications especially for the amplification the genomes of these retroviruses and for in vitro diagnosis of infections due to these viruses |
FR2647810B1 (en) * | 1989-06-02 | 1994-07-22 | Pasteur Institut | OLIGONUCLEOTIDE PRIMERS FOR THE AMPLIFICATION OF THE GENOME OF HIV-2 AND SIV RETROVIRUSES, AND THEIR APPLICATIONS TO THE IN VITRO DIAGNOSIS OF INFECTIONS DUE TO THESE VIRUSES |
DE3934366A1 (en) * | 1989-10-14 | 1991-04-18 | Chemotherapeutisches Forschungsinstitut Georg Speyer Haus | VACCINE FOR PROTECTION AGAINST HIV VIRUS INFECTIONS, METHOD FOR THE PRODUCTION THEREOF AND THEIR USE AS A DIAGNOSTIC AND IMMUNOTHERAPEUTIC |
US6248574B1 (en) * | 1989-12-13 | 2001-06-19 | Avigdor Shaffermann | Polypeptides selectively reactive with antibodies against human immunodeficiency virus and vaccines comprising the polypeptides |
FR2657016B1 (en) * | 1990-01-16 | 1995-08-25 | Clonatec Sa | PEPTIDES DERIVED FROM THE GLYCOPROTEIN ENVELOPE OF THE HIV-2 VIRUS, THEIR APPLICATIONS FOR THE DETECTION OF AN INFECTION DUE TO THIS VIRUS AND FOR VACCINATION AGAINST AIDS. |
ATE164853T1 (en) * | 1990-01-16 | 1998-04-15 | Orgenics Ltd | PEPTIDES DERIVED FROM VIRUS HIV ENVEL GLYCOPROTEINS, THEIR USE FOR DETECTING INFECTION OF THESE VIRUSES AND FOR VACCINATION AGAINST AIDS |
DE4002636A1 (en) * | 1990-01-30 | 1991-08-01 | Boehringer Mannheim Gmbh | EXPRESSION OF HIV1 AND 2 POLYPEPTIDES AND THEIR USE |
EP0594638A1 (en) * | 1991-06-03 | 1994-05-04 | Syntello Vaccine Development Ab | Peptides for use in induction of t cell activation against hiv-1 |
DK0726962T3 (en) | 1991-12-23 | 2006-10-09 | Chiron Corp | Set of HIV probes for use in solution-phase sandwich hybridization assays |
JPH0748276A (en) * | 1992-03-26 | 1995-02-21 | Inmeru:Kk | Preventing vaccine for hiv infectious disease and production thereof |
US6479055B1 (en) | 1993-06-07 | 2002-11-12 | Trimeris, Inc. | Methods for inhibition of membrane fusion-associated events, including respiratory syncytial virus transmission |
DE4405810A1 (en) | 1994-02-23 | 1995-08-24 | Behringwerke Ag | Peptides derived from a retrovirus from the HIV group and their use |
DE69837666T2 (en) * | 1997-08-01 | 2007-12-27 | Genetic Systems Corp., Redmond | SYNTHETIC ANTIGENES FOR THE DETECTION OF ANTIBODIES WITH IMMUNOMATIC ACTIVITY AGAINST HIV VIRUS |
DE19908766C2 (en) * | 1999-02-19 | 2001-02-15 | Ulrich Schubert | Use of synthetic Vpr peptides of the human immunodeficiency virus type 1 (HIV-1) for the development of therapeutic and diagnostic reagents |
WO2005097822A1 (en) * | 2004-04-09 | 2005-10-20 | University Of Manitoba | Identification of the precise amino acid sequence of the epitope recognized by the potent neutralizing human anti-hiv-1 monoclonal antibody igg1b12 |
CA2577183C (en) * | 2004-08-17 | 2014-02-18 | Institut Gustave Roussy | Mutated hiv nef for modulating immunity |
WO2007084021A2 (en) * | 2006-01-17 | 2007-07-26 | Instituto De Medicina Molecular | Compositions and methods for diagnosing hiv-2 infection |
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IE64006B1 (en) * | 1984-10-18 | 1995-06-28 | Pasteur Institut | Antigens particulary envelope antigens of the virus of lymphadenopathies and of the acquired immune-deficiency syndrome and virus process for producing virus envelope antigens use of said antigens in the preparation of immunogenic compositions or for the diagnosis of the presence of antibodies against this virus |
AU600658B2 (en) * | 1984-12-24 | 1990-08-23 | Genentech Inc. | Molecularly cloned acquired immunodeficiency syndrome polypeptides and their methods of use |
NZ215867A (en) * | 1985-04-19 | 1989-10-27 | Hoffmann La Roche | Aids envelope protein, dna vectors and method of production |
US4629783A (en) * | 1985-04-29 | 1986-12-16 | Genetic Systems Corporation | Synthetic antigen for the detection of AIDS-related disease |
DE3533440A1 (en) * | 1985-09-19 | 1987-03-26 | Hoechst Ag | N-SUBSTITUTED 3,4,5,6-TETRAHYDROPHTHALIMIDES, METHODS FOR THEIR PRODUCTION AND THEIR USE IN PLANT PROTECTION |
GR862412B (en) * | 1985-09-25 | 1987-01-23 | Oncogen | Vaccines and immuinoassays for acquired immune deficiency syndrome |
FR2593189B1 (en) * | 1986-01-22 | 1989-10-20 | Pasteur Institut | NEW RETROVIRUS THAT MAY CAUSE AIDS, ANTIGENS OBTAINED FROM THIS RETROVIRUS AND CORRESPONDING ANTIBODIES AND THEIR APPLICATIONS TO AIDS DIAGNOSIS |
EP0320495B1 (en) * | 1986-01-22 | 2000-08-02 | Institut Pasteur | Process for the recombinant production of proteins of HIV-2 and cells expressing HIV-2 proteins |
EP0269520A3 (en) * | 1986-11-21 | 1988-08-24 | Institut Pasteur | Retrovirus of the type hiv-2, susceptible to provoke aids, and its antigenic and nucleic-acid constituents |
JP3105581B2 (en) * | 1991-07-03 | 2000-11-06 | 内橋エステック株式会社 | Planar temperature fuse |
JPH0833969A (en) * | 1994-07-22 | 1996-02-06 | Toyota Motor Corp | Pressurized casting method |
-
1988
- 1988-01-15 JP JP63501472A patent/JP2948823B2/en not_active Expired - Lifetime
- 1988-01-15 AT AT88400084T patent/ATE154808T1/en not_active IP Right Cessation
- 1988-01-15 EP EP88400084A patent/EP0283327B1/en not_active Expired - Lifetime
- 1988-01-15 DE DE3855947T patent/DE3855947T2/en not_active Expired - Lifetime
- 1988-01-15 ES ES88400084T patent/ES2104556T3/en not_active Expired - Lifetime
- 1988-01-15 AU AU12250/88A patent/AU608294B2/en not_active Expired
- 1988-01-15 WO PCT/FR1988/000025 patent/WO1988005440A1/en unknown
- 1988-09-15 DK DK198805133A patent/DK174705B1/en not_active IP Right Cessation
-
1995
- 1995-04-19 JP JP7117839A patent/JP2862810B2/en not_active Expired - Lifetime
-
1997
- 1997-09-24 GR GR970402458T patent/GR3024823T3/en unknown
-
1999
- 1999-04-06 JP JP11099449A patent/JPH11322792A/en active Pending
-
2001
- 2001-04-27 JP JP2001133477A patent/JP2002030099A/en active Pending
-
2003
- 2003-05-19 JP JP2003140638A patent/JP2004002421A/en active Pending
Also Published As
Publication number | Publication date |
---|---|
JP2004002421A (en) | 2004-01-08 |
JP2002030099A (en) | 2002-01-29 |
EP0283327B1 (en) | 1997-06-25 |
ES2104556T3 (en) | 1997-10-16 |
DK513388A (en) | 1988-11-16 |
EP0283327A3 (en) | 1989-01-04 |
AU1225088A (en) | 1988-08-10 |
EP0283327A2 (en) | 1988-09-21 |
DE3855947T2 (en) | 1997-12-11 |
WO1988005440A1 (en) | 1988-07-28 |
JP2948823B2 (en) | 1999-09-13 |
ATE154808T1 (en) | 1997-07-15 |
JP2862810B2 (en) | 1999-03-03 |
JPH11322792A (en) | 1999-11-24 |
AU608294B2 (en) | 1991-03-28 |
JPH01502119A (en) | 1989-07-27 |
GR3024823T3 (en) | 1998-01-30 |
DK513388D0 (en) | 1988-09-15 |
JPH07300498A (en) | 1995-11-14 |
DE3855947D1 (en) | 1997-07-31 |
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