DE60125243D1 - Polynukleotid-sequenzassay - Google Patents
Polynukleotid-sequenzassayInfo
- Publication number
- DE60125243D1 DE60125243D1 DE60125243T DE60125243T DE60125243D1 DE 60125243 D1 DE60125243 D1 DE 60125243D1 DE 60125243 T DE60125243 T DE 60125243T DE 60125243 T DE60125243 T DE 60125243T DE 60125243 D1 DE60125243 D1 DE 60125243D1
- Authority
- DE
- Germany
- Prior art keywords
- sample
- polynucleotide sequence
- disclosed
- ligation
- target sequence
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Expired - Lifetime
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6844—Nucleic acid amplification reactions
- C12Q1/6862—Ligase chain reaction [LCR]
Landscapes
- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Organic Chemistry (AREA)
- Engineering & Computer Science (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Health & Medical Sciences (AREA)
- Molecular Biology (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Immunology (AREA)
- Microbiology (AREA)
- Biophysics (AREA)
- Analytical Chemistry (AREA)
- Physics & Mathematics (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Biochemistry (AREA)
- Biotechnology (AREA)
- General Engineering & Computer Science (AREA)
- General Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Investigating, Analyzing Materials By Fluorescence Or Luminescence (AREA)
- Investigating Or Analysing Biological Materials (AREA)
- Investigating Or Analysing Materials By The Use Of Chemical Reactions (AREA)
Applications Claiming Priority (3)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US21651400P | 2000-07-03 | 2000-07-03 | |
US216514P | 2000-07-03 | ||
PCT/US2001/021209 WO2002002823A2 (en) | 2000-07-03 | 2001-07-03 | Polynucleotide sequence assay |
Publications (2)
Publication Number | Publication Date |
---|---|
DE60125243D1 true DE60125243D1 (de) | 2007-01-25 |
DE60125243T2 DE60125243T2 (de) | 2007-05-31 |
Family
ID=22807344
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
DE60125243T Expired - Lifetime DE60125243T2 (de) | 2000-07-03 | 2001-07-03 | Polynukleotid-sequenzassay |
Country Status (8)
Country | Link |
---|---|
US (2) | US6511810B2 (de) |
EP (1) | EP1358350B1 (de) |
JP (1) | JP2004507230A (de) |
AT (1) | ATE348191T1 (de) |
AU (1) | AU2001271816B9 (de) |
CA (1) | CA2415125A1 (de) |
DE (1) | DE60125243T2 (de) |
WO (1) | WO2002002823A2 (de) |
Families Citing this family (59)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US20060275782A1 (en) * | 1999-04-20 | 2006-12-07 | Illumina, Inc. | Detection of nucleic acid reactions on bead arrays |
US7582420B2 (en) | 2001-07-12 | 2009-09-01 | Illumina, Inc. | Multiplex nucleic acid reactions |
US20050214825A1 (en) * | 2000-02-07 | 2005-09-29 | John Stuelpnagel | Multiplex sample analysis on universal arrays |
US8076063B2 (en) * | 2000-02-07 | 2011-12-13 | Illumina, Inc. | Multiplexed methylation detection methods |
US7955794B2 (en) | 2000-09-21 | 2011-06-07 | Illumina, Inc. | Multiplex nucleic acid reactions |
US20030129666A1 (en) * | 2001-01-09 | 2003-07-10 | Mitsubishi Pharma Corporation | Novel proteome analysis method and devices therefor |
AU2003269908A1 (en) * | 2002-07-15 | 2004-02-02 | Illumina, Inc. | Multiplex nucleic acid reactions |
KR20050070034A (ko) * | 2002-10-04 | 2005-07-05 | 미쯔비시 웰 파마 가부시키가이샤 | 질량 분석용 플레이트, 그 제조 방법 및 그 용도 |
AU2003295745A1 (en) * | 2002-11-19 | 2004-06-15 | Applera Corporation | Polynucleotide sequence detection assays |
WO2004046343A2 (en) * | 2002-11-19 | 2004-06-03 | Applera Corporation | Polynucleotide sequence detection assays and analysis |
WO2005001129A2 (en) * | 2003-06-06 | 2005-01-06 | Applera Corporation | Mobility cassettes |
US20050032113A1 (en) * | 2003-07-17 | 2005-02-10 | Mitsubishi Pharma Corporation | Membrane protein library for proteome analysis and method for preparing same |
US7262013B2 (en) * | 2003-08-29 | 2007-08-28 | Applera Corporation | Bisulfite method |
US7371526B2 (en) | 2003-08-29 | 2008-05-13 | Applera Corporation | Method and materials for bisulfite conversion of cytosine to uracil |
US7368239B2 (en) | 2003-08-29 | 2008-05-06 | Applera Corporation | Method and materials for polyamine catalyzed bisulfite conversion of cytosine to uracil |
US7534873B2 (en) * | 2003-08-29 | 2009-05-19 | Applied Biosystems, Llc | Method and materials for quaternary amine catalyzed bisulfite conversion of cytosine to uracil |
CA2560945C (en) * | 2004-04-01 | 2013-06-18 | Bio-Rad Laboratories, Inc. | Quantitative amplification with a labeled probe and 3' to 5' exonuclease activity |
US7517978B1 (en) * | 2004-04-14 | 2009-04-14 | Applied Biosystems, Llc | Modified oligonucleotides and applications thereof |
US20060019366A1 (en) * | 2004-06-09 | 2006-01-26 | Wanli Bi | Reversibly modified thermostable enzyme compositions and methods of making and using the same |
US20060029953A1 (en) * | 2004-06-29 | 2006-02-09 | Applera Corporation | Methods and kits comprising amplification and ligation for analyzing target polynucleotide sequences |
US20060019289A1 (en) * | 2004-06-30 | 2006-01-26 | Applera Corporation | Compositions and methods for gene expression analysis |
US20060234252A1 (en) * | 2004-07-02 | 2006-10-19 | Applera Corporation | Methods and kits for methylation detection |
WO2006112818A2 (en) * | 2005-04-14 | 2006-10-26 | Applera Corporation | 3' modified oligonucleotides containing pseudoisocytosine nucleobase derivatives and applications thereof as primers or probes |
US7658288B2 (en) * | 2004-11-08 | 2010-02-09 | Applied Biosystems, Llc | Bisulfite conversion reagent |
US20070087360A1 (en) * | 2005-06-20 | 2007-04-19 | Boyd Victoria L | Methods and compositions for detecting nucleotides |
US20070099211A1 (en) * | 2005-07-15 | 2007-05-03 | Vissarion Aivazachvili | Detection of nucleic acid amplification |
WO2007041201A2 (en) | 2005-10-03 | 2007-04-12 | Applera Corporation | Compositions, methods, and kits for amplifying nucleic acids |
EP2677039B8 (de) | 2006-05-10 | 2022-10-05 | DxTerity Diagnostics Incorporated | Erkennung von Nukleinsäuretargets mithilfe chemisch reaktiver Oligonnucleotidsonden |
US9045522B2 (en) | 2006-07-31 | 2015-06-02 | Wanli Bi | Nucleic acid amplification using a reversibly modified oligonucleotide |
ATE538216T1 (de) * | 2006-07-31 | 2012-01-15 | Wanli Bi | Nukleinsäureverstärkung mithilfe eines reversibel modifizierten oligonukleotids |
EP2484781B1 (de) | 2006-08-01 | 2017-08-23 | Applied Biosystems, LLC | Nachweis von Analyten und Nukleinsäuren |
US9938641B2 (en) * | 2006-12-18 | 2018-04-10 | Fluidigm Corporation | Selection of aptamers based on geometry |
US8008010B1 (en) | 2007-06-27 | 2011-08-30 | Applied Biosystems, Llc | Chimeric oligonucleotides for ligation-enhanced nucleic acid detection, methods and compositions therefor |
WO2009091719A1 (en) | 2008-01-14 | 2009-07-23 | Applera Corporation | Compositions, methods, and kits for detecting ribonucleic acid |
WO2009144581A1 (en) | 2008-05-27 | 2009-12-03 | Dako Denmark A/S | Hybridization compositions and methods |
US9388456B2 (en) | 2009-02-26 | 2016-07-12 | Dako Denmark A/S | Compositions and methods for performing a stringent wash step in hybridization applications |
WO2010111509A1 (en) | 2009-03-25 | 2010-09-30 | Life Technologies Corporation | Discriminatory positive/extraction control dna |
CA2757300C (en) * | 2009-04-01 | 2018-01-09 | Dxterity Diagnostics Incorporated | Chemical ligation dependent probe amplification (clpa) |
WO2011082325A2 (en) | 2009-12-31 | 2011-07-07 | Life Technologies Corporation | Sequences of e.coli 055:h7 genome |
US8586301B2 (en) * | 2010-06-30 | 2013-11-19 | Stratos Genomics, Inc. | Multiplexed identification of nucleic acid sequences |
US20120270216A1 (en) | 2011-04-19 | 2012-10-25 | Life Technologies Corporation | Compositions and methods for detecting and identifying salmonella enterica strains |
EP2710145B1 (de) | 2011-05-17 | 2015-12-09 | Dxterity Diagnostics Incorporated | Verfahren und zusammensetzungen zum nachweis von zielnukleinsäuren |
US20120322676A1 (en) | 2011-06-17 | 2012-12-20 | Life Technologies Corporation | Compositions and methods for detection of cronobacter spp. and cronobacter species and strains |
WO2013046033A1 (en) | 2011-09-30 | 2013-04-04 | Dako Denmark A/S | Hybridization compositions and methods using formamide |
EP3252173A1 (de) | 2011-10-21 | 2017-12-06 | Dako Denmark A/S | Hybridisierungszusammensetzungen und -verfahren |
CA2896713A1 (en) * | 2011-12-28 | 2013-07-04 | Ricardo Mancebo | Reagents and methods for autoligation chain reaction |
WO2013106807A1 (en) | 2012-01-13 | 2013-07-18 | Curry John D | Scalable characterization of nucleic acids by parallel sequencing |
JP2015508655A (ja) * | 2012-02-14 | 2015-03-23 | コーネル ユニバーシティー | 組み合わせたヌクレアーゼ反応、連結反応、およびポリメラーゼ反応を用いて核酸配列、発現、またはコピー変化を相対的に定量するための方法 |
US9990464B1 (en) | 2012-10-09 | 2018-06-05 | Pall Corporation | Label-free biomolecular interaction analysis using a rapid analyte dispersion injection method |
WO2015071552A1 (en) * | 2013-11-18 | 2015-05-21 | Teknologian Tutkimuskeskus Vtt | Multi-unit probes with high specificity and a method of designing the same |
KR101598398B1 (ko) * | 2014-01-08 | 2016-02-29 | (주)제노텍 | 5''-플랩 엔도뉴클레이즈 활성의 억제를 이용하여 실시간 중합효소 연쇄반응으로 돌연변이 유전자를 검사하는 방법 |
US9757095B2 (en) | 2014-06-10 | 2017-09-12 | Dxterity Diagnostics Incorporated | Devices and methods for collecting and stabilizing biological samples |
NL2013857B1 (en) | 2014-11-21 | 2016-10-11 | Piculet Biosciences Tech B V | Self-assembled bivalent ligand complex (SABLC) libraries and methods for screening such libraries. |
US11118216B2 (en) | 2015-09-08 | 2021-09-14 | Affymetrix, Inc. | Nucleic acid analysis by joining barcoded polynucleotide probes |
US10876148B2 (en) | 2018-11-14 | 2020-12-29 | Element Biosciences, Inc. | De novo surface preparation and uses thereof |
US10704094B1 (en) | 2018-11-14 | 2020-07-07 | Element Biosciences, Inc. | Multipart reagents having increased avidity for polymerase binding |
US11104961B2 (en) | 2020-01-13 | 2021-08-31 | Fluent Biosciences Inc. | Single cell sequencing |
WO2021188500A1 (en) | 2020-03-16 | 2021-09-23 | Fluent Biosciences Inc. | Multi-omic analysis in monodisperse droplets |
US20220380856A1 (en) * | 2021-05-28 | 2022-12-01 | Fluent Biosciences Inc. | Spatial transcriptomics in pips |
Family Cites Families (16)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US4988617A (en) * | 1988-03-25 | 1991-01-29 | California Institute Of Technology | Method of detecting a nucleotide change in nucleic acids |
US5427930A (en) * | 1990-01-26 | 1995-06-27 | Abbott Laboratories | Amplification of target nucleic acids using gap filling ligase chain reaction |
US5516663A (en) | 1990-01-26 | 1996-05-14 | Abbott Laboratories | Ligase chain reaction with endonuclease IV correction and contamination control |
US5573907A (en) | 1990-01-26 | 1996-11-12 | Abbott Laboratories | Detecting and amplifying target nucleic acids using exonucleolytic activity |
AU635105B2 (en) * | 1990-01-26 | 1993-03-11 | Abbott Laboratories | Improved method of amplifying target nucleic acids applicable to both polymerase and ligase chain reactions |
US5494810A (en) * | 1990-05-03 | 1996-02-27 | Cornell Research Foundation, Inc. | Thermostable ligase-mediated DNA amplifications system for the detection of genetic disease |
US5846717A (en) | 1996-01-24 | 1998-12-08 | Third Wave Technologies, Inc. | Detection of nucleic acid sequences by invader-directed cleavage |
US5994069A (en) | 1996-01-24 | 1999-11-30 | Third Wave Technologies, Inc. | Detection of nucleic acids by multiple sequential invasive cleavages |
WO1994003636A1 (en) * | 1992-08-03 | 1994-02-17 | Abbott Laboratories | Detecting and amplifying target nucleic acids using exonucleolytic activity |
ES2185719T3 (es) * | 1994-12-23 | 2003-05-01 | Dade Behring Inc | Deteccion de acidos nucleicos por formacion de un producto catalizada por diana. |
US5985557A (en) | 1996-01-24 | 1999-11-16 | Third Wave Technologies, Inc. | Invasive cleavage of nucleic acids |
JP3665648B2 (ja) | 1996-01-24 | 2005-06-29 | サード ウェーブ テクノロジーズ,インコーポレーテッド | 核酸の侵入的開裂 |
EP1736554B1 (de) * | 1996-05-29 | 2013-10-09 | Cornell Research Foundation, Inc. | Bestimmung von Unterschieden in der Nukleinsäuresequenz mittels einer Kombination von Ligasebestimmung und Polymerasekettenreaktion |
US6312892B1 (en) * | 1996-07-19 | 2001-11-06 | Cornell Research Foundation, Inc. | High fidelity detection of nucleic acid differences by ligase detection reaction |
EP0966542B1 (de) | 1996-11-29 | 2008-11-12 | Third Wave Technologies, Inc. | Fen-1 endonukleasen, gemische und spaltmethoden |
WO2000036151A1 (en) * | 1998-12-14 | 2000-06-22 | Li-Cor, Inc. | A heterogeneous assay for pyrophosphate detection |
-
2001
- 2001-07-03 AT AT01950861T patent/ATE348191T1/de not_active IP Right Cessation
- 2001-07-03 WO PCT/US2001/021209 patent/WO2002002823A2/en active IP Right Grant
- 2001-07-03 JP JP2002507065A patent/JP2004507230A/ja active Pending
- 2001-07-03 EP EP01950861A patent/EP1358350B1/de not_active Expired - Lifetime
- 2001-07-03 CA CA002415125A patent/CA2415125A1/en not_active Abandoned
- 2001-07-03 DE DE60125243T patent/DE60125243T2/de not_active Expired - Lifetime
- 2001-07-03 US US09/898,323 patent/US6511810B2/en not_active Expired - Lifetime
- 2001-07-03 AU AU2001271816A patent/AU2001271816B9/en not_active Ceased
-
2003
- 2003-01-27 US US10/351,955 patent/US20040005585A1/en not_active Abandoned
Also Published As
Publication number | Publication date |
---|---|
CA2415125A1 (en) | 2002-01-10 |
EP1358350B1 (de) | 2006-12-13 |
WO2002002823A2 (en) | 2002-01-10 |
WO2002002823A3 (en) | 2003-08-28 |
US20040005585A1 (en) | 2004-01-08 |
EP1358350A2 (de) | 2003-11-05 |
JP2004507230A (ja) | 2004-03-11 |
DE60125243T2 (de) | 2007-05-31 |
ATE348191T1 (de) | 2007-01-15 |
AU2001271816B9 (en) | 2007-05-24 |
AU2001271816B2 (en) | 2007-03-08 |
AU7181601A (en) | 2002-01-14 |
US20020150904A1 (en) | 2002-10-17 |
US6511810B2 (en) | 2003-01-28 |
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Legal Events
Date | Code | Title | Description |
---|---|---|---|
8364 | No opposition during term of opposition | ||
8327 | Change in the person/name/address of the patent owner |
Owner name: APPLIED BIOSYSTEMS, LLC (N. D. GES. D. STAATES, US |
|
8380 | Miscellaneous part iii |
Free format text: PFANDRECHT |
|
8380 | Miscellaneous part iii |
Free format text: PFANDRECHT AUFGEHOBEN |