CN112662766A - Method for detecting familial thoracic aortic aneurysm and interlayer related mutant gene based on high-throughput sequencing technology - Google Patents

Method for detecting familial thoracic aortic aneurysm and interlayer related mutant gene based on high-throughput sequencing technology Download PDF

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CN112662766A
CN112662766A CN202011297996.9A CN202011297996A CN112662766A CN 112662766 A CN112662766 A CN 112662766A CN 202011297996 A CN202011297996 A CN 202011297996A CN 112662766 A CN112662766 A CN 112662766A
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段艳宇
刘子由
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First Affiliated Hospital of Gannan Medical University
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Abstract

The invention discloses a method for detecting familial thoracic aortic aneurysm and interlayer related mutant gene based on high-throughput sequencing technology, which comprises the steps of (1) collecting samples; (2) designing a panel; (3) constructing a library; (4) sequencing on a computer; (5) and (5) data analysis annotation. The invention is based on the technical process of target area capture high-throughput sequencing, and the method uses the multiple PCR capture process to detect 12 pathogenic genes at one time by selecting 12 pathogenic gene sets related to FTAAD. Compared with the prior art, the method has the advantages of strong pertinence, low cost, fast flow and the like.

Description

Method for detecting familial thoracic aortic aneurysm and interlayer related mutant gene based on high-throughput sequencing technology
Technical Field
The invention belongs to the technical field of molecular biology, and particularly relates to a method for detecting genes related to familial thoracic aortic aneurysm and interlayer disease based on an illumina sequencing platform.
Background
Thoracic aortic aneurysms are a very aggressive cardiovascular crisis severe and often asymptomatic. However, if the aneurysm is not fixed, it becomes larger and larger over time, and may even tear the aorta. Rupture of the aorta can result in blood flow to the wrong part of the body, potentially life threatening. About one fifth of patients with thoracic aortic aneurysms, which are caused by parentally inherited defective genes, are known as familial thoracic aortic aneurysms. If one of the parents carries a defective gene associated with Familial Thoracic Aortic Aneurysm and Dissection (FTAAD), then each of their children has 50% of the opportunity to inherit the gene, and the siblings or parents of the person carrying the FTAAD risk gene also have 50% of the opportunity to inherit the gene. If genetic testing indicates that a person is at risk of developing FTAAD, then they should have a 50% -80% probability of having FTAAD that is 50-fold higher than a person who does not carry the defective gene. These patients should be periodically examined imagewise to monitor their own aorta. Currently, hypotensive drugs are commonly used in FTAAD patients to relieve aortic pressure; but if the aorta becomes too large, surgery is required. Several genes have been found to be associated with FTAAD, and alterations in some genes, including ACTA2, MYLK and MYH11, have been shown to result in FTAAD; other genes such as TGFBR1, TGFBR2, SMAD3, PRKG1, LOX, COL3A1, TGFB2, TGFB3, and FBN-1 are also associated with risk of developing FTAAD, and therefore we can identify people at risk of FTAAD through gene testing.
The Chinese first edition 'Single Gene genetic cardiovascular disease Gene diagnostic guidance' formulated by the cardiovascular disease society of the Chinese medical society, accurate cardiovascular group and the like suggests twelve gene-related results of ACTA2, FBN1, MYH11, MYLK, SMAD3, TGFBR1, TGFBR2, PRKG1, LOX, COL3A1, TGFB2, TGFB3 and the like, wherein the gene mutation of ACTA2 can explain 10-15% of familial TAAD. Patients who carry mutations in the causative gene but who are temporarily asymptomatic may undergo early disease prediction and intervention, such as periodic (1 time per year before aortic dilation and 1 time in the second half of the year) imaging examinations to discover and monitor early disease. Can be used for individual treatment according to genotype and phenotype, such as advanced operation (such as maximum internal diameter of thoracic aorta up to 4.0-5.0cm) to prevent dissection and rupture; the maximum inner diameter of thoracic aorta of TGFBR1 and TGFBR2 pathogenic gene mutation carriers is 4.2cm, and operation can be considered; for patients with ACTA2 gene mutation, the maximum internal diameter of the thoracic aorta is 4.5cm, which is considered for surgery. The risk of coronary artery disease in the early stroke of ACTA2 gene mutation patients is high, and attention should be paid. If the first-class relatives of 1 or more of the first-class relatives have the phenotype of thoracic aortic dilatation, tumor or dissection, the second-class relatives can carry out imaging examination and gene detection.
Currently, the genetic detection technologies commonly used in clinic include sequencing technologies such as Sanger sequencing and high-throughput sequencing, probe technologies such as fluorescence PCR, gene chips, suspension chips, mass spectrometry and ARMs, and mass spectrometry such as DHPLC, wherein the probe and mass spectrometry can also detect mutation, but can only detect known variation of single nucleotide such as SNP. The sequencing technology is a gold standard for gene mutation detection, is the most advanced level which can be achieved by the prior art and is closest to objective facts, or reflects the objective facts; as in pathological diagnosis. In sequencing, Sanger sequencing is widely applied technology and has the advantages of rapidness, accuracy, simplicity and convenience and the like, but has the problems of low flux, high relative cost, low automation degree and the like, and is difficult to meet the requirement of detecting multiple genes and multiple variations at one time. High throughput sequencing achieves the goal of simultaneously detecting unknown genetic mutations in multiple genes, divided into whole genome sequencing and targeted sequencing, which attempts to obtain different combinations from millions of sequences, and thus cannot leave an enrichment step, wherein the hybrid capture method uses probes complementary to the target of interest, the amplicon-based method relies on multiplex PCR reactions, and selective circularization relies on molecular inversion probes; whole genome sequencing can detect all types of variation on a genome at the same time, but has weak pertinence, large data volume and higher cost of each item. Clinical application usually pursues to be fast, economical and simple, and a group of effective gene sets are selected to perform high-throughput sequencing so as to reduce cost, so that the method becomes an effective method for detecting the FTAAD mutant genes.
Other names for FTAAD are: thoracic Aortic Aneurysm (TAA), Thoracic Aortic Aneurysm and Dissection (TAAD), Familial Aortic Aneurysm (FAA), and aortic annulectasia.
Disclosure of Invention
The invention aims to solve the technical problem that an effective and low-cost gene mutation method for detecting FTAAD is lacked at present, a multiple PCR (polymerase chain reaction) capture technology is adopted for the technical problem, a pathogenic gene set of the FTAAD is captured and enriched by using an amplification principle, then the detection is carried out through a high-throughput sequencing platform, and the gene mutation related to the FTAAD is detected and read by using a biological information analysis process and an ACMG genetic reading guide so as to assist the accurate diagnosis and treatment of the FTAAD in clinic. The method has high flux, can realize single-tube reaction detection of dozens of mutation sites, and has simple and convenient operation and low cost.
In order to achieve the purpose, the invention adopts the technical scheme that:
a method for detecting familial thoracic aortic aneurysm and dissecting associated mutant gene based on high throughput sequencing technology comprises the steps of,
(1) collecting samples:
selecting 12 pathogenic genes ACTA2, FBN1, MYH11, MYLK, SMAD3, TGFBR1, TGFBR2, PRKG1, LOX, COL3A1, TGFB2 and TGFB3 related to the familial thoracic aortic aneurysm and interlayer related genes;
(2) the panel design:
the kit consists of 7 tubes of reagents,
wherein 5 tubes of reagents are stored at-20 ℃ and comprise 1 tube of IGT-I7Index (10uM) reagent, 1 tube of IGT-I5 Index (10uM) reagent, 1 tube of Primer pool reagent, 1 tube of IGT-EM808 polymerase mix reagent and 1 tube of Enhancer buffer NB (1N) reagent;
the other 2 tubes of reagents are stored at 4 ℃ and comprise 1 tube of Enhancer buffer M reagent and 1 tube of YF buffer B reagent;
in the designed kit, the Primer pool reagent contains 367 amplicons, the sequence of each amplicon is 1-367, each amplicon comprises a forward Primer and a reverse Primer, and the sequences of the forward Primer and the reverse Primer are SEQ ID No.1-SEQ ID No. 734;
(3) library construction:
(3.1) 1 st round of multiplex PCR reaction
Preparing reaction liquid in a PCR tube according to the formula shown in the table below, and gently blowing, sucking and mixing the reaction liquid up and down by using a gun;
Figure BDA0002785960530000031
operating a PCR instrument, putting the PCR tube into the PCR tube, and carrying out reaction according to the following procedures: the cycle was performed after first 95 ℃ for 210 s: circulating for 18 times at 98 deg.C for 10s and 60 deg.C for 5min, and extending for 5min at 72 deg.C;
(3.2) purification of the product by magnetic beads
(3.2.1) adding 27ul of AMPure XP magnetic beads which are balanced at room temperature into 30ul of PCR products processed in the step (3.1), and sucking and uniformly mixing the products for 20 times by using a pipette;
(3.2.2) after incubating for 5min at room temperature, placing the PCR tube on a DynaMag-96Side magnetic frame for 3 min;
(3.2.3) completely removing the supernatant, taking down the PCR tube from the magnetic rack, adding 50ul YF buffer B into the tube, and sucking and mixing the mixture by a pipettor for 20 times;
(3.2.4) after incubating for 5min at room temperature, placing the PCR tube on a DynaMag-96Side magnetic frame for 3 min;
(3.2.5) removing the supernatant, placing the PCR tube on a magnetic frame, adding 180ul of 80% ethanol solution with volume percentage concentration into the PCR tube, and standing for 30 s;
(3.2.6) removing the supernatant, continuously placing the PCR tube on a magnetic frame, adding 180ul of ethanol solution with the volume percentage concentration of 80%, standing for 30s, and completely removing the supernatant;
(3.2.7) standing at room temperature for 3min to completely volatilize residual ethanol;
(3.2.8) removing the PCR tube from the magnetic frame, adding 24. mu.l of nucleic-free water, pipetting to gently pipette the resuspended beads to avoid air bubbles, and standing at room temperature for 2 min;
(3.2.9) putting the PCR tube on the magnetic frame again, and standing for 3 min;
(3.2.10) pipetting 13.5. mu.l of the supernatant and transferring the supernatant into a new 200. mu.l PCR tube, wherein the supernatant transferred into the tube is a multiplex PCR product;
(3.3) round 2 adaptor sequence PCR reaction
The reaction solution was prepared in a PCR tube according to the following formulation, and gently mixed by up-and-down blowing and sucking with a gun. Wherein the PCR product mix is the purified multiplex PCR product obtained in the step (3.2.10);
Figure BDA0002785960530000041
Figure BDA0002785960530000051
operating the PCR instrument, putting the PCR tube into the PCR tube, and carrying out reaction according to the following program: the cycle was performed after first 95 ℃ for 210 s: circulating at 98 deg.C for 20s, 68 deg.C for 1min, and 72 deg.C for 30s for 9 times, and extending at 72 deg.C for 5 min;
(3.4) round 2 magnetic bead purification
(3.4.1) taking 30ul of the PCR reaction system treated in the step (3.3), adding 27ul of AMPure XP magnetic beads balanced at room temperature, and sucking and uniformly mixing the mixture for 20 times by using a pipette;
(3.4.2) after incubating at room temperature for 5min, placing the PCR tube on a DynaMag-96Side magnetic frame for 3 min;
(3.4.3) completely removing the supernatant, taking down the PCR tube from the magnetic rack, adding 50ul YF buffer B into the PCR tube, and sucking and mixing the mixture for 20 times by using a pipettor;
(3.4.4) after incubating for 5min at room temperature, the PCR tube was placed on a DynaMag-96Side magnetic frame for 3 min;
(3.4.5) removing the supernatant, continuously placing the PCR tube on a magnetic frame, adding 180ul of 80% ethanol solution in volume percentage into the PCR tube, and standing for 30 s;
(3.4.6) removing the supernatant, continuously placing the PCR tube on a magnetic frame, adding 180ul of 80% ethanol solution in volume percentage into the PCR tube, standing for 30s, and completely removing the supernatant;
(3.4.7) standing at room temperature for 3min to completely volatilize residual ethanol;
(3.4.8) removing the centrifuge tube from the magnetic frame, adding 24 μ l of nucleic-free water or 1 × TE buffer (pH8.0), pipetting and mixing for 20 times, resuspending the magnetic beads to avoid generating bubbles, and standing at room temperature for 2 min;
(3.4.9) putting the PCR tube on the magnetic frame again, and standing for 3 min;
(3.4.10) pipetting 20. mu.l of the supernatant and transferring the supernatant into a new 200. mu.l PCR tube, wherein the supernatant transferred into the tube is the prepared multiplex PCR library;
(3.5) library quantification
The multiplex PCR library obtained in 2ul step (3.4.10) was taken and used
Figure BDA0002785960530000052
3.0fluorometer (qubit dsDNA HS Assay kit) to perform library concentration determination and record library concentration; the concentration range of a normal library constructed by human genome DNA is 5-40 ng/ul;
(4) sequencing on machine
Sequencing the qualified multiplex PCR library obtained in the step (3.6) by using Hiseq Xten PE150 to obtain a gene sequence table, wherein the computer-operated data volume is 300 Mb;
(5) data analysis annotation: after the sequencing data is downloaded, performing bioinformatics analysis on the downloaded data, and detecting variation on genes;
(5.1) the quality control of the off-line data Fastq format: for each pair of original Fastq sequence raw reads generated by each sample library and lane, removing a sequencing joint and sequence reads containing a large number of 'N' bases by using software cutAdpt to obtain sequence Clean reads meeting quality control, and counting basic information of the sequence Clean reads by using software fastqc, wherein the basic information comprises the number of sequences and bases, GC content and distribution, sequencing error rate and distribution and base quality distribution;
(5.2) Alignment: using software bwa, aligning the sequence Clean reads with a human reference genome GRCh38 to obtain an alignment information file BAM of the sequence Clean reads on the reference genome;
(5.3) BAM preprocessing of the comparison information file: combining BAM files of comparison information files generated by different libraries and Lane of the same sample together by using picard and GATK software, sequencing according to genome coordinates, verifying the BAM files of the comparison information files, removing a repetitive sequence generated in the PCR process, correcting a base quality value, and obtaining a Clean BAM of the comparison file after pretreatment; counting and comparing the file Clean BAM by using the picard software to obtain quality control information; the quality control information comprises coverage, depth, capture efficiency and uniformity of a target region capture chip, the number of comparable sequences and bases, and the length distribution of insert fragments;
(5.4) mutation detection: detecting small fragment variation on the gene by using GATK software, wherein the small fragment variation comprises Single Nucleotide Polymorphism (SNP) and insertion and deletion indels; and (3) filtering the detected variation, wherein the SNP filtering conditions are as follows: QD <3.37| | FS >31.397| | SOR >10.419| | MQ <20.0| | MQRankSum < -12.49| | ReadPosRankSum < -3.721, and the Indel filtering conditions are as follows: QD <5.2| | FS >52.254| | SOR >9.044| | ReadPosRankSum < -5.504;
annotating the variations that meet the filtering conditions, and noting the corresponding genes, transcripts, variation types, functions, and frequencies in normal populations;
and (5) counting variation results to obtain variation quantity, length distribution, various type variation quantity and crowd variation frequency information.
For better technical effect, the concentration of gDNA to be detected is diluted to the same concentration before step (3.1), and then transferred to the PCR8 tube.
In order to obtain better technical effect, step (3.6) of library quality detection is carried out after step (3.5),
taking 1ul of the multiple PCR library obtained in the step (3.4), and measuring the length and purity of the library fragment by using a Qsep100 full-automatic nucleic acid protein analysis system, wherein the target fragment distribution interval of the normal library is between 300bp and 420 bp;
performing library detection on the multiplex PCR library obtained in the step (3.4) by using align 2100 and QPCR;
the result of the multiple PCR library Aligent 2100 fragment obtained in the step (3.4) is qualified when the result is between 250bp and 350bp, and the result of QPCR is qualified when the result is more than 10 nM;
and (4) sequencing the qualified multiplex PCR library in the step (4) to obtain a gene sequence table.
In order to obtain better technical effect, the method also comprises the step (6) of mutation interpretation: explaining the relationship between variant SNPs and variant indels and diseases;
variants were classified into 5 classes by using the software REO-HIT according to the ACMG/AMP guidelines: pathogenic, suspected pathogenic, unknown meaning, suspected benign, benign;
in order to obtain better technical effects, the method also comprises the step (7) of giving a report, verifying the sequencing results of the pathogenicity, suspected pathogenicity, unknown significance and suspected virtuosity one by one through the Sanger method sequencing, and giving the report.
The invention is based on a target area capturing high-throughput sequencing technical process, 12 pathogenic gene sets related to FTAAD are selected, a multiple PCR capturing process and the following implementation scheme are used for performing high-throughput capturing sequencing analysis, the gene variation situation related to the FTAAD is decoded by a gene detection technology, and the multi-gene variation analysis result refers to the guidance decoding variation published by American genetic society (ACMG), molecular pathology society (AMP) and China medical society cardiovascular disease society accurate cardiovascular disease group and the like.
Compared with the prior art, the method has the advantages of strong pertinence, low cost, fast flow and the like.
Reagent manufacturers: illumina Corp.
Drawings
FIG. 1 is a flowchart illustrating genetic variation analysis and interpretation according to an embodiment of the present invention;
FIG. 2 shows the results of quality control library of Qsep100 full-automatic nucleic acid protein analysis system according to the present invention;
FIG. 3 is a flowchart of a detection technique according to an embodiment of the present invention.
Detailed Description
The invention is further explained in detail below with reference to the drawings and the detailed description.
A method for detecting familial thoracic aortic aneurysm and dissecting associated gene based on high throughput sequencing technology comprises the steps of,
(1) collecting samples:
based on the above situation, the invention selects genes/variants of FTAAD with sufficient evidence including gene, protein function research, family inheritance research, population variant analysis, etc. by querying a large number of DISEASE databases and FTAAD research records in literature research, including OMIM, ClinVar, CGD, Orphanet, DISEASE, GeneReviews, and 'single-gene hereditary cardiovascular DISEASE gene detection guidelines'. Finally, 12 pathogenic genes of FTAAD are selected, and a gene list is shown in table 1;
TABLE 1
Figure BDA0002785960530000081
Finally, 12 pathogenic genes ACTA2, FBN1, MYH11, MYLK, SMAD3, TGFBR1, TGFBR2, PRKG1, LOX, COL3A1, TGFB2 and TGFB3 related to familial thoracic aortic aneurysm and interlayer are selected;
(2) the panel design:
the kit consists of 7 tubes of reagents,
wherein 5 tubes of reagents are stored at-20 ℃ and comprise 1 tube of IGT-I7Index (10uM) reagent, 1 tube of IGT-I5 Index (10uM) reagent, 1 tube of Primer pool reagent, 1 tube of IGT-EM808 polymerase mix reagent and 1 tube of Enhancer buffer NB (1N) reagent;
the other 2 tubes of reagents are stored at 4 ℃ and comprise 1 tube of Enhancer buffer M reagent and 1 tube of YF buffer B reagent;
designing the region as the exon region of each gene, and allowing the two sides of the exon region to extend 15bp respectively;
in the designed kit, the Primer pool reagent contains 367 amplicons, the sequence of each amplicon is 1-367, each amplicon comprises a forward Primer and a reverse Primer, the sequences of the forward Primer and the reverse Primer are SEQ ID No.1-SEQ ID No.734, and the detailed Primer sequences are shown in appendix 3;
the position information of the IGT-I7Index is disclosed in appendix 1, "96 IGT-I7Index position information";
the information of IGT-I5 Index is described in appendix 2;
reagent manufacturers: illumina Corp.;
the kit adopts two rounds of PCR reactions to construct the library, has the advantages of short library construction period, high contrast ratio, high capture rate, good uniformity, good repeatability, simple and convenient operation and the like, and supports various samples to extract human whole genome DNA for constructing the library, such as saliva, blood and the like;
(3) library construction:
(3.0) diluting the concentrations of all gDNAs to be detected to the same concentration, and transferring the gDNAs to a PCR8 union tube, wherein on one hand, the gDNA concentration is convenient for the gun arrangement operation, and on the other hand, the gDNA concentration difference of the final library is reduced for adding the same initial amount of gDNA, so that the library is convenient to mix; reaction numbering is carried out on the upper part of the PCR tube wall or the tube cover, so that the marks are prevented from disappearing due to high temperature or other reasons, and the cross contamination of samples caused by the misoperation of mixing subsequent products is avoided;
(3.1) 1 st round of multiplex PCR reaction
Preparing reaction liquid in a PCR tube (or a calandria or a PCR plate) according to the formula in the following table, and gently blowing and sucking up and down by using a gun to mix uniformly;
Figure BDA0002785960530000091
operating a PCR instrument, putting the PCR tube into the PCR tube, and carrying out reaction according to the following procedures: the cycle was performed after first 95 ℃ for 210 s: circulating for 18 times at 98 deg.C for 10s and 60 deg.C for 5min, and extending for 5min at 72 deg.C;
(3.2) magnetic bead purification of pooled products
(3.2.1) adding 27ul of AMPure XP magnetic beads which are balanced at room temperature into 30ul of PCR products processed in the step (3.1), and sucking and uniformly mixing the products for 20 times by using a pipette;
(3.2.2) after incubating for 5min at room temperature, placing the PCR tube on a DynaMag-96Side magnetic frame for 3 min;
(3.2.3) completely removing the supernatant, taking down the PCR tube from the magnetic rack, adding 50ul YF buffer B into the tube, and sucking and mixing the mixture by a pipettor for 20 times;
(3.2.4) after incubating for 5min at room temperature, placing the PCR tube on a DynaMag-96Side magnetic frame for 3 min;
(3.2.5) removing the supernatant, placing the PCR tube on a magnetic frame, adding 180ul of 80% ethanol solution with volume percentage concentration into the PCR tube, and standing for 30 s;
(3.2.6) removing the supernatant, continuously placing the PCR tube on a magnetic frame, adding 180ul of 80% ethanol solution with volume percentage concentration into the PCR tube, standing for 30s, completely removing the supernatant, and recommending to remove the residual ethanol solution at the bottom by using a 10 mu l pipette;
(3.2.7) standing at room temperature for 3min to completely volatilize residual ethanol;
(3.2.8) removing the PCR tube from the magnetic frame, adding 24. mu.l of nucleic-free water, pipetting to gently pipette the resuspended beads to avoid air bubbles, and standing at room temperature for 2 min;
(3.2.9) putting the PCR tube on the magnetic frame again, and standing for 3 min;
(3.2.10) pipetting 13.5. mu.l of the supernatant and transferring the supernatant into a new 200. mu.l PCR tube, wherein the supernatant transferred into the tube is a multiplex PCR product;
(3.3) round 2 adaptor sequence PCR reaction
Preparing reaction liquid in a PCR tube (or a calandria or a PCR plate) according to the formula shown in the table below, and gently blowing and sucking up and down by using a gun to mix uniformly, wherein the PCR product mixture is the purified multiplex PCR product obtained in the step (3.2.10);
Figure BDA0002785960530000101
operating the PCR instrument, putting the PCR tube into the PCR tube, and carrying out reaction according to the following program: the cycle was performed after first 95 ℃ for 210 s: circulating at 98 deg.C for 20s, 68 deg.C for 1min, and 72 deg.C for 30s for 9 times, and extending at 72 deg.C for 5 min;
(3.4) round 2 magnetic bead purification
(3.4.1) taking 30ul of the PCR reaction system treated in the step (3.3), adding 27ul of AMPure XP magnetic beads balanced at room temperature, and sucking and uniformly mixing the mixture for 20 times by using a pipette;
(3.4.2) after incubating at room temperature for 5min, placing the PCR tube on a DynaMag-96Side magnetic frame for 3 min;
(3.4.3) completely removing the supernatant, taking down the PCR tube from the magnetic rack, adding 50ul YF buffer B into the tube, and sucking and mixing the mixture by a pipettor for 20 times;
(3.4.4) after incubating for 5min at room temperature, the PCR tube was placed on a DynaMag-96Side magnetic frame for 3 min;
(3.4.5) removing the supernatant, continuously placing the PCR tube on a magnetic frame, adding 180ul of 80% ethanol solution in volume percentage into the PCR tube, and standing for 30 s;
(3.4.6) removing the supernatant, continuously placing the PCR tube on a magnetic frame, adding 180ul of 80% ethanol solution in volume percentage into the PCR tube, standing for 30s, completely removing the supernatant, and recommending to remove the residual ethanol solution at the bottom by using a 10-microliter pipettor;
(3.4.7) standing at room temperature for 3min to completely volatilize residual ethanol;
(3.4.8) removing the centrifuge tube from the magnetic frame, adding 24 μ l of nucleic-free water or 1 × TE buffer (pH8.0), pipetting and mixing for 20 times, resuspending the magnetic beads to avoid generating bubbles, and standing at room temperature for 2 min;
(3.4.9) putting the PCR tube on the magnetic frame again, and standing for 3 min;
(3.4.10) pipetting 20. mu.l of the supernatant and transferring the supernatant into a new 200. mu.l PCR tube, wherein the supernatant transferred into the tube is the prepared multiplex PCR library;
(3.5) library quantification
The multiplex PCR library obtained in 2ul step (3.4.10) was taken and used
Figure BDA0002785960530000111
3.0fluorometer (qubit dsDNA HS Assay kit) to perform library concentration determination and record library concentration; the concentration range of a normal library formed by saliva gDNA or blood gDNA is 5-40 ng/ul;
(3.6) library quality testing
Taking 1ul of the multiple PCR library obtained in the step (3.4), and using a Qsep100 full-automatic nucleic acid protein analysis system to measure the length and purity of the library fragment, wherein the target fragment distribution interval of the normal library is between 300bp and 420bp, and the detection result is shown in figure 2;
performing library detection on the multiplex PCR library obtained in the step (3.4) by using align 2100 and QPCR;
the result of the multiple PCR library Aligent 2100 fragment obtained in the step (3.4) is qualified when the result is between 250bp and 350bp, and the result of QPCR is qualified when the result is more than 10 nM;
(4) sequencing on machine
Sequencing the qualified multiplex PCR library obtained in the step (3.6) by using Hiseq Xten PE150 to obtain a gene sequence table, wherein the computer-operated data volume is 300 Mb;
(5) data analysis annotation: after the sequencing data is downloaded, performing bioinformatics analysis on the downloaded data, and detecting variation on genes;
(5.1) the quality control of the off-line data Fastq format: for each pair of original Fastq sequence raw reads generated by each sample library and lane, removing a sequencing joint and sequence reads containing a large number of 'N' bases by using software cutAdpt to obtain sequence Clean reads meeting quality control, and counting basic information of the sequence Clean reads by using software fastqc, wherein the basic information comprises the number of sequences and bases, GC content and distribution, sequencing error rate and distribution and base quality distribution;
(5.2) Alignment: using software bwa, aligning the sequence Clean reads with a human reference genome GRCh38 to obtain an alignment information file BAM of the sequence Clean reads on the reference genome;
(5.3) BAM preprocessing of the comparison information file: the method comprises the steps of using picard and GATK software to combine BAM files of comparison information files generated by different libraries and Lane of the same sample, sequencing according to genome coordinates, verifying the BAM files of the comparison information files, removing repeated sequences generated in a PCR process, correcting a base quality value, and obtaining a Clean BAM of the preprocessed comparison file. Counting and comparing the file Clean BAM by using the picard software to obtain quality control information; the quality control information comprises coverage, depth, capture efficiency and uniformity of a target region capture chip, the number of comparable sequences and bases, and the length distribution of insert fragments;
(5.4) mutation detection: detecting small fragment variation on the gene by using GATK software, wherein the small fragment variation comprises Single Nucleotide Polymorphism (SNP) and insertion and deletion indels;
and (3) filtering the detected variation, wherein the SNP filtering conditions are as follows: QD <3.37| | FS >31.397| | SOR >10.419| | MQ <20.0| | MQRankSum < -12.49| | ReadPosRankSum < -3.721, and the Indel filtering conditions are as follows: QD <5.2| | FS >52.254| | SOR >9.044| | ReadPosRankSum < -5.504;
annotating the variations that meet the filtering conditions to obtain variation information, wherein the variation information comprises genes, transcripts, variation types, functions and frequencies in normal population;
counting variation results to obtain variation quantity, length distribution, various type variation quantity and proportion appearing in population;
(6) mutation interpretation: explaining the relationship between variant SNP and variant Indel and diseases,
the variants were classified into 5 classes by using the software REO-HIT according to the ACMG/AMP guidelines (Genet Med.2015May; 17 (5): 405-: pathogenic, suspected pathogenic, unknown meaning, suspected benign, benign;
the software REO-HIT process is shown in fig. 1.
The method comprises the specific steps of carrying out,
loading a database: loading ClinVar, CGD and OMIM databases;
collecting variation information: reading the variation information obtained in the step (5.4) one by one to obtain crowd variation frequency information, disease variation information and variation function prediction information;
processing interpretation evidence:
i) by database comparison with the collected mutation information, it was sequentially judged whether each mutation satisfied ACMG/AMP guidelines (Genet med.2015may; 17(5): 405-424.) said pathogenic evidence or benign evidence;
wherein the evidence of pathogenicity includes: strong pathogenic PVS, strong pathogenic PS, medium pathogenic PM and weak pathogenic PP;
benign evidence includes: independent benign BA, strong benign BS, weak benign BP;
ii) combining the evidence of variation, classifying each variation according to the ACMG/AMP combination rules as: pathogenic, suspected pathogenic, unknown meaning, suspected benign, benign;
(7) issue a report
And (3) verifying the sequencing results of the detected diseases, suspected diseases, unknown meanings and suspected benign one by one through Sanger sequencing, and giving a report.
Comparative example
Sanger sequencing is a gold standard for the detection of DNA mutations, but due to its limited sensitivity, it is not possible to simultaneously probe multiple targets in parallel.
When the Sanger sequencing is adopted to detect ACTA2, FBN1, MYH11, MYLK, SMAD3, TGFBR1, TGFBR2, PRKG1, LOX, COL3A1, TGFB2 and TGFB3 genes, the respective Sanger sequencing of each exon is required, and the cost is high.
The target region capture high-throughput sequencing used by the invention relates to the targeted enrichment of ACTA2, FBN1, MYH11, MYLK, SMAD3, TGFBR1, TGFBR2, PRKG1, LOX, COL3A1, TGFB2 and TGFB3 gene exons, and the detection of all the gene exons can be realized only once by parallel sequencing of Illumina XTen.
FTAAD is consistent with the clinical symptoms of sporadic TAAD and requires detection of FTAAD-associated gene mutations for definitive diagnosis. FTAAD is autosomal dominant hereditary disease, but the penetrance of different families is different, 50% -80% of carriers have TAAD, and the FTAAD has obvious genetic heterogeneity. 12 pathogenic genes such as ACTA2, FBN1, MYH11, MYLK, TGFBR1, TGFBR2 and COL3A1 have been reported. The traditional technology is difficult to examine the variation of the genes at one time, and a new generation of sequencing technology provides a new solution.
The invention provides an experimental process and a reading method which can detect 12 pathogenic genes related to FTAAD at one time, including screening of all FTAAD related genes and capturing of related genes by using a multiplex PCR technology. Accurately reading the relation between variation and diseases, and providing important basis for FTAAD screening, early diagnosis, differential diagnosis, individualized medication, birth guide and exercise suggestion.
The technology adopts a multiple PCR capture technology, captures a selected specific effective gene set by using an amplification principle, then detects the gene mutation of the FTAAD through a high-throughput sequencing platform, and detects the gene mutation of the FTAAD by using a self-established bioinformation analysis flow and an ACMG genetic interpretation guide so as to assist the clinical accurate diagnosis and treatment of diseases.
A method for detecting the pathogenic gene mutation of FTAAD based on high-throughput sequencing technology features that the total 12 pathogenic genes of FTAAD are enriched by multiple PCR targets. Secondly, 367 pairs of primers designed can enrich the 12 pathogenic gene exons and the intervals extending 15bp on both sides in a targeted manner from the human genome through one PCR reaction. ③ constructing the experimental process and technical parameters of the library by matching with the labeling technology used by MiniSeq, NextSeq, HiSeq 3000/4000, Hiseq X Ten, MiSeq, HiSeq 2000/2500 and NovaSeq sequencers published by Illumina company; the labeled joint is used in the process of capturing and building a library, so that the sequencing noise pollution is reduced, the PCR error is corrected, the accuracy of the result is improved, and particularly, the low-frequency mutation is easier to detect. The library constructed by the kit is used for sequencing technical parameters, data quality requirements after sequencing and the like of MiniSeq, NextSeq, HiSeq 3000/4000, Hiseq X Ten, MiSeq, HiSeq 2000/2500 and NovaSeq sequencers published by Illumina. The bioinformatics analysis method, parameters and flow of the sequencing sequence corresponding to the invention. Sixthly, sequencing variation result pathogenicity reading process and clinical explanation.
The method can be based on a high-throughput sequencing technology, and has a deformation scheme 1. a method for specifically enriching a pathogenic gene to be detected from a genome, such as changing from multiplex PCR to hybridization capture or selective cyclization, 2. a joint and a PCR amplification condition and an experimental flow are changed based on a probe used by a sequencing platform except Illumina, 3. a sequencing depth and a sequencing quality parameter and the like are changed based on a sequencing method used by the sequencing platform except Illumina, 4. a sequencing data interpretation method and a variation interpretation means corresponding to a bioinformatics algorithm and detection accuracy, and 5. a pathogenic interpretation method and a clinical application interpretation.
The invention detects gene sequences based on a high-throughput targeted sequencing technology, analyzes and reads gene variation and pathogenic probability thereof through bioinformatics, and is suitable for medical and third-party detection institutions with sequencers, large-scale servers, bioinformatics teams and the like. The possible deformation scheme of the clinical application of the invention can be based on probe technology such as fluorescence PCR, gene chip, suspension chip, mass spectrum technology and ARMs, and mass spectrum such as DHPLC directly detects the pathogenic hot point SNP and the corresponding result interpretation method.
Appendix 1:
position information for IGT-I7Index, using BOX1, 96-well plates,
1 2 3 4 5 6 7 8 9 10 11 12
A A01 A02 A03 A04 A05 A06 A07 A08 A09 A10 A11 A12
B B01 B02 B03 B04 B05 B06 B07 B08 B09 B10 B11 B12
C C01 C02 C03 C04 C05 C06 C07 C08 C09 C10 C11 C12
D D01 D02 D03 D04 D05 D06 D07 D08 D09 D10 D11 D12
E E01 E02 E03 E04 E05 E06 E07 E08 E09 E10 E11 E12
F F01 F02 F03 F04 F05 F06 F07 F08 F09 F10 F11 F12
G G01 G02 G03 G04 G05 G06 G07 G08 G09 G10 G11 G12
H H01 H02 H03 H04 H05 H06 H07 H08 H09 H10 H11 H12
appendix 2: IGT-I5 Index sequence information
The IGT-I5 Index end sample separation sequence is related to a sequencing platform:
MiniSeq, NextSeq, HiSeq 3000/4000, and Hiseq X Ten sequencing platforms, please use the sample sequences in the Index column;
MiSeq, HiSeq 2000/2500 and NovaSeq sequencing platforms, please use the subsampling sequence of the Inprimer column;
3. in the case of single-ended sequencing, the data are resolved only using the IGT-I7Index sample separation sequence, as shown in the following table,
Name indcx sample separation sequence Inprimcr partial sample sequence
IGT-15-31# GTAGAGGA TCCTCTAC
IGT-15-32# CCGCCTTA TAAGGCGG
IGT-15-33# ATAGTACG CGTACTAT
lGT-15-34# TTCTGCCT AGGCAGAA
Appendix 3:
primer pool reagent is provided comprising 367 amplicons, the sequence of the amplicons is 1-367, each amplicon comprises a forward Primer and a reverse Primer, the sequence of the forward Primer and the reverse Primer is SEQ ID No.1-SEQ ID No. 734; in particular, as shown in the following table,
Figure BDA0002785960530000171
Figure BDA0002785960530000181
Figure BDA0002785960530000191
Figure BDA0002785960530000201
Figure BDA0002785960530000211
Figure BDA0002785960530000221
Figure BDA0002785960530000231
SEQUENCE LISTING
<110> heart cerebrovascular prevention and cure education department key laboratory
FIRST AFFILIATED HOSPITAL OF GANNAN MEDICAL University
Paragraph, yanyu
Liu, Zi is composed of
<120> method for detecting familial thoracic aortic aneurysm and interlayer related mutant gene based on high-throughput sequencing technology
<130> 2020
<160> 734
<170> PatentIn version 3.5
<210> 1
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 1
cagttgtgtg ctagagacag agag 24
<210> 2
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 2
tgtcctaccg cactaacgac t 21
<210> 3
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 3
ccaggaaaag ggcgtttgtt g 21
<210> 4
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 4
cagaccctaa tgtttgccac aatg 24
<210> 5
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 5
ttcaatccca tctctggcag tg 22
<210> 6
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 6
gtgtgctctc ctgaccattc tt 22
<210> 7
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 7
cagcagtagt gtggtgttct gt 22
<210> 8
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 8
cacaagtttt gggagatgct gac 23
<210> 9
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 9
attgccactg ggtctgtcac 20
<210> 10
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 10
ctctccactt aaggaccatg gc 22
<210> 11
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 11
tggtcctgga agttactgag ca 22
<210> 12
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 12
catggtgact tatcacgccc aa 22
<210> 13
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 13
cttctctctg ctgtgctgca t 21
<210> 14
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 14
ggaaatgcag gacctcatga ca 22
<210> 15
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 15
acagaggaac ctaatctgtg tcct 24
<210> 16
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 16
cacaaatgcc caattacagc tgag 24
<210> 17
<211> 32
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 17
gtttttcttt taattatttg gtctctggat gg 32
<210> 18
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 18
aagggatcag ctacctccac tt 22
<210> 19
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 19
agcaaagatg gctgtcttct ca 22
<210> 20
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 20
tgtgtatgca gcataaggca ga 22
<210> 21
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 21
ctccaaccat gaccaggaag ag 22
<210> 22
<211> 19
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 22
aacgaatgcc tcagcgctc 19
<210> 23
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 23
agccatgcat cttgagagtg ag 22
<210> 24
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 24
taggatgtgt aggggccaga tt 22
<210> 25
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 25
ttcttatccc aacagcagag gaa 23
<210> 26
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 26
gttggcttga ctcaaatgcc tc 22
<210> 27
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 27
ccacttgagg ataagccatc aga 23
<210> 28
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 28
acactgaagt gaccccctac ata 23
<210> 29
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 29
cacagcagca ttccgatttg g 21
<210> 30
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 30
gctttcccct cttgcttctt ct 22
<210> 31
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 31
gtcacttctg atgcactcaa agc 23
<210> 32
<211> 28
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 32
agtcaggtaa ttaaggcaga tatatgca 28
<210> 33
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 33
tgttcccagg atcagtacac gta 23
<210> 34
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 34
catcatgttt tggacacatt cctgg 25
<210> 35
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 35
aaagcctggg ccctaaacta c 21
<210> 36
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 36
gagtattgga ggggacagac atc 23
<210> 37
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 37
ttccctatga ggttcacgca ac 22
<210> 38
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 38
ccataacaca gagggaagtt accg 24
<210> 39
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 39
gccatcaaag cttcatggaa tcc 23
<210> 40
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 40
aaggctgtcc tgagactcat ttg 23
<210> 41
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 41
ggcaattggc catggaaaac g 21
<210> 42
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 42
atccgcctgg aaacctgctt 20
<210> 43
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 43
ccctatcgga catgctgaat tttg 24
<210> 44
<211> 27
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 44
agatatagat gaatgtgaag tgttccc 27
<210> 45
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 45
gacagcttta tccagtccga gt 22
<210> 46
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 46
tgtcagaact gcaaagtctg ga 22
<210> 47
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 47
ttcttttgca ggaaaagctg aca 23
<210> 48
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 48
taggcccaag actagatttt agcag 25
<210> 49
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 49
caggcaatgt ttcagaaaat gggta 25
<210> 50
<211> 34
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 50
cctaaggtca ttacatttat tgtagtgtta tatt 34
<210> 51
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 51
aagacctcaa tggtggcaga ag 22
<210> 52
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 52
gtgacagtgt gatgacagat gc 22
<210> 53
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 53
cataaggagg agaaaaggca cgt 23
<210> 54
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 54
ccttcgtaag cttactcttc tggtc 25
<210> 55
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 55
tatgtcccac attccacgtc ag 22
<210> 56
<211> 28
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 56
ggaacccaga aagtcttaga attatgag 28
<210> 57
<211> 31
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 57
acttgaacaa tgcaagaaaa ataactagat g 31
<210> 58
<211> 27
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 58
ctgttgtgtt ttgttttgtt gtgtttt 27
<210> 59
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 59
ggaactgact tacacaaacc atgc 24
<210> 60
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 60
ctgagtcctt ctactgacga atgg 24
<210> 61
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 61
gagaatggct ctccagagca a 21
<210> 62
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 62
acaggacagg cccatgtttt 20
<210> 63
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 63
ttcaggaagt agccatgcag ac 22
<210> 64
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 64
aagcgtctca gctctctcct ta 22
<210> 65
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 65
tgcaggaaag aggaaagcca a 21
<210> 66
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 66
catgtgctaa cagacctctg gt 22
<210> 67
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 67
cttgaaactt gggagaccca ca 22
<210> 68
<211> 16
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 68
caagaggcgg cgggag 16
<210> 69
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 69
aataggttcc agccactggc tt 22
<210> 70
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 70
cagaagccaa tgtgagtctt gc 22
<210> 71
<211> 27
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 71
agacatcagg agaaactaac ttctgac 27
<210> 72
<211> 28
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 72
ccttgtcttc ccattctaat gaaaaaca 28
<210> 73
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 73
cgcagagcca cattcattga tg 22
<210> 74
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 74
agcaagtggc cagatccaat g 21
<210> 75
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 75
acaaggattc accagctgga tc 22
<210> 76
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 76
ggaattttaa cccctctttg ccc 23
<210> 77
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 77
gtggagttct tacaggcaaa gga 23
<210> 78
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 78
gatgcacagt cacgctgtat ttc 23
<210> 79
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 79
agattccctg caagtatttt tgga 24
<210> 80
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 80
cagacaatcg ggaagggtac t 21
<210> 81
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 81
ttaggaaagt gcggtgccaa 20
<210> 82
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 82
aaggaaggag ctccatcctc ta 22
<210> 83
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 83
aagggaagct ttgagggaca tc 22
<210> 84
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 84
ggtaggttcc cttttgttgc tg 22
<210> 85
<211> 28
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 85
tggtacctat attcatggct atacagtg 28
<210> 86
<211> 32
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 86
cttcacgttt aaaaaatacc ttgttattca ct 32
<210> 87
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 87
cttacatcat ggccagtctg ca 22
<210> 88
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 88
aggaaagcaa ctgaagggtg tc 22
<210> 89
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 89
ttctgctaag tccagtggac ac 22
<210> 90
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 90
catgccagtg ggaacctctt 20
<210> 91
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 91
actgacttcc tttgctgatg ca 22
<210> 92
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 92
tgctctttag ccactgtaac cg 22
<210> 93
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 93
agacaaactc ttgggtaggc atg 23
<210> 94
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 94
tgagaggctt tgttgactgg ac 22
<210> 95
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 95
gaaagttctg acaatgccgt catg 24
<210> 96
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 96
ccaattattg ttctttgctg acccc 25
<210> 97
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 97
gaacttgtga gctctcttcc tct 23
<210> 98
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 98
tcaggccatt ccaaaatgtg aag 23
<210> 99
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 99
cccaaggaaa ttcaagttgt gtgt 24
<210> 100
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 100
cagacgggca gagtaacaac taa 23
<210> 101
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 101
acacagtatg cttgcttctc tga 23
<210> 102
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 102
ttgggccctg ttcttttatg gt 22
<210> 103
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 103
cctaatctca tcaagcccag ca 22
<210> 104
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 104
aaccgaggaa gagtaacgtg tg 22
<210> 105
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 105
gcagtccttg ataagcaacc tct 23
<210> 106
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 106
ccaaaagaca tttgtgctga gcc 23
<210> 107
<211> 28
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 107
cagtgcttat gactaacaag acaagatg 28
<210> 108
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 108
gactgcggtc agttaatgtt ttctc 25
<210> 109
<211> 28
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 109
cagagtacat agagtgtttt agggagag 28
<210> 110
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 110
gacagacatc aatgaatgtg agctg 25
<210> 111
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 111
gaccacaagt aaatggtgtg aaagtc 26
<210> 112
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 112
gtcaagatgg acacccagca at 22
<210> 113
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 113
tttaaaggac gtcccctctc ct 22
<210> 114
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 114
acctcctgac tgcttgctca ta 22
<210> 115
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 115
cactcctcgc attcctcagt ac 22
<210> 116
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 116
ggaagccgtg tggctctatt ta 22
<210> 117
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 117
cacttgaatg accccctagt gt 22
<210> 118
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 118
gttctggttg ctattcaggc ac 22
<210> 119
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 119
cattggagtg gtataggaac caca 24
<210> 120
<211> 29
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 120
tgctattttt gtctataatt ccaaggtgt 29
<210> 121
<211> 27
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 121
ggcattccaa aagatagcaa agtacac 27
<210> 122
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 122
gcaaagtaga tacaggcaaa gtttgg 26
<210> 123
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 123
catcccagat acatggcaca gt 22
<210> 124
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 124
aagggcagga tctacctgtt ct 22
<210> 125
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 125
cctctctcat aaggttagcc atgatg 26
<210> 126
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 126
tcctatcttc cccattttca aggg 24
<210> 127
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 127
actgcaatgg aaggagagga ct 22
<210> 128
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 128
tgagtttgca aatggaggga gg 22
<210> 129
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 129
acagaattac aacagaccct tggt 24
<210> 130
<211> 30
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 130
tgtcagatta agtactgatg aaagatacca 30
<210> 131
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 131
gctgggatgg gatattctgc a 21
<210> 132
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 132
tcagcgatgt gtgtgtgtgt 20
<210> 133
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 133
actacacccc ccaactgcaa 20
<210> 134
<211> 30
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 134
tggtaacata attgtggaca aattatcaca 30
<210> 135
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 135
ccgtgcggat atttggaatg aag 23
<210> 136
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 136
ttcctctgca tgatggttcc tg 22
<210> 137
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 137
cccaggtaat cgaagaaaat ccatc 25
<210> 138
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 138
ctgtgagctg ttgcaatcta tgc 23
<210> 139
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 139
ccccatgcaa ccaacacaac 20
<210> 140
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 140
gtctgccagg attcatcttg ct 22
<210> 141
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 141
gttttcttgc cgtggtgcaa 20
<210> 142
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 142
atcccaacca tgaagatttc tttgc 25
<210> 143
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 143
cagtgctttt ctctggcctg a 21
<210> 144
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 144
cctaaccacc cctccaactc t 21
<210> 145
<211> 19
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 145
ggttcggaac tccacaccc 19
<210> 146
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 146
ctcatggcct tcactctcct c 21
<210> 147
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 147
ataaaatggg ggtcgaggat gc 22
<210> 148
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 148
gtactttcaa gggtggctga gt 22
<210> 149
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 149
catgccccaa gctcctagtg 20
<210> 150
<211> 19
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 150
tgagccaaag gacctccca 19
<210> 151
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 151
cgaaacatgg acgagaaaaa cca 23
<210> 152
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 152
gttgtagttg ttagccgagg agaa 24
<210> 153
<211> 18
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 153
agcgtccatg gccagagt 18
<210> 154
<211> 18
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 154
ttgccagcac cgtggaag 18
<210> 155
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 155
gttgagagga cccatgaagg aag 23
<210> 156
<211> 17
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 156
ccttcctcgg ggcaggt 17
<210> 157
<211> 15
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 157
accaccgcgc cacct 15
<210> 158
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 158
ctgttatccc tcccctctgc t 21
<210> 159
<211> 18
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 159
gtgggattga tgggcccc 18
<210> 160
<211> 18
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 160
tctgctgggt ctctccct 18
<210> 161
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 161
ggcaacagag caagacctca 20
<210> 162
<211> 27
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 162
tcctaaagct atctctttct ctttccc 27
<210> 163
<211> 16
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 163
gggctgcccc tgtgac 16
<210> 164
<211> 16
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 164
ctccccacca cctgcg 16
<210> 165
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 165
cccaaatgtg aaggctccag a 21
<210> 166
<211> 19
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 166
agcagggtgt ggcttcatg 19
<210> 167
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 167
gtaagaacgg tcccaccaag ag 22
<210> 168
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 168
caacggtaag tcccaaggtc tg 22
<210> 169
<211> 17
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 169
tgggagcccc agggtct 17
<210> 170
<211> 19
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 170
agaggctgat gccaccctg 19
<210> 171
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 171
gggtcccctg agacagagtc 20
<210> 172
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 172
ctgattcaag ccctacttgt ctcc 24
<210> 173
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 173
aagcccatct cagacaacca ag 22
<210> 174
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 174
tggagcccat tgagaataac cg 22
<210> 175
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 175
ccaaccccaa agtcattggt ca 22
<210> 176
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 176
taggctccaa aactccaggg ta 22
<210> 177
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 177
atcccttaac cccggattct ga 22
<210> 178
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 178
gtgaattggg tgtgacaggg at 22
<210> 179
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 179
gcaggagatg acaccaaagc tt 22
<210> 180
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 180
ctgtgggtta agggcagagt tt 22
<210> 181
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 181
ggttggctaa atcatggcct ct 22
<210> 182
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 182
tcaccatgga acgtgtgcat ag 22
<210> 183
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 183
gaactgcaga caagcaggac a 21
<210> 184
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 184
aggtctggaa gtaagctggg t 21
<210> 185
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 185
gtgaccttct tgccattctc ca 22
<210> 186
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 186
ctgttacctt attccacagg ggac 24
<210> 187
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 187
ccaagcctcc agattttgca ag 22
<210> 188
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 188
aaccgggctc cttcttgttt 20
<210> 189
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 189
agagttggag gggtggttag g 21
<210> 190
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 190
gtgacacacc agctacaagg g 21
<210> 191
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 191
agagacagta ggcagcgtga 20
<210> 192
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 192
ccaaggaggg ggcatctttt aa 22
<210> 193
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 193
gaaatctggg aatgcacaga ctg 23
<210> 194
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 194
aaggacatct gagcttgtcc tc 22
<210> 195
<211> 15
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 195
tggcctcccc ggcag 15
<210> 196
<211> 15
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 196
gctgcccgct ctgcc 15
<210> 197
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 197
cctctcatcc gcgtatttgg aa 22
<210> 198
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 198
aacctacact gcttacacct gc 22
<210> 199
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 199
tcgatctcct tctggaacct ct 22
<210> 200
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 200
agacatggtc ttcgcttctc ag 22
<210> 201
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 201
cctgcaaaag ggatgcaaag ag 22
<210> 202
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 202
aggatcccct tctagaggct tt 22
<210> 203
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 203
ctttatgcag accctgacct gt 22
<210> 204
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 204
ccattcactg tgttcctccc a 21
<210> 205
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 205
gggatacatg gacacacagc aa 22
<210> 206
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 206
cttcctgaag agcaccttgg tt 22
<210> 207
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 207
gcctcaagtg atccacatac ct 22
<210> 208
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 208
ccaaagctgt tactcttttc cctc 24
<210> 209
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 209
caagtcctgt tccccagcaa 20
<210> 210
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 210
tgacaacata tccctttgcc ac 22
<210> 211
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 211
cgcgtttgag gtattaggat gc 22
<210> 212
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 212
agtggaaatc aggagctctt cc 22
<210> 213
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 213
ggtacctcca gcatccattc c 21
<210> 214
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 214
gatccactgc cctctttgac c 21
<210> 215
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 215
tccagctcaa agcagaacat gg 22
<210> 216
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 216
cagaagatct ggaaggacaa tggg 24
<210> 217
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 217
acacacgtgt acaaggtgtg ac 22
<210> 218
<211> 16
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 218
gatgctcacg ccccgc 16
<210> 219
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 219
gggtgcatgg atggataagt ga 22
<210> 220
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 220
gagaacccgc tgtattcaca ga 22
<210> 221
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 221
ctaccctcca gactcaaggt gt 22
<210> 222
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 222
tgaccagatc tcggtctcat gt 22
<210> 223
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 223
ggaaagatag aggtggctct tgg 23
<210> 224
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 224
catggggtta acggctgaag t 21
<210> 225
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 225
accccatttc taccaccagc ta 22
<210> 226
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 226
ctgtttgggg ggatcaaagt ca 22
<210> 227
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 227
aagagaggca cttggaacca tg 22
<210> 228
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 228
agacccttag ctcagagctc at 22
<210> 229
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 229
tccttatgag gccaggagta gg 22
<210> 230
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 230
cttcgaggca gccagcatta 20
<210> 231
<211> 32
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 231
ccttttaata tgacttagaa actgcttttc tc 32
<210> 232
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 232
gatgaccagt caatcaggga gtc 23
<210> 233
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 233
atccagccac accctattca tg 22
<210> 234
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 234
caacgagtga agaaatgacc tgg 23
<210> 235
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 235
ctgggaatga aagtggcttg aac 23
<210> 236
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 236
aggtctcctc ctgctcaaaa atc 23
<210> 237
<211> 19
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 237
tggtccacca gtccaccaa 19
<210> 238
<211> 19
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 238
acacacagat tcgggcagc 19
<210> 239
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 239
tgcttgtgga tgtactccac tc 22
<210> 240
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 240
ggattcagga attgcccatc ac 22
<210> 241
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 241
agctgaggca ctgaatctaa ctg 23
<210> 242
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 242
tctgagactc acaccaaccc t 21
<210> 243
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 243
cgcacatttg tttcaagcca ct 22
<210> 244
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 244
acagtcctac agcatcgaga tct 23
<210> 245
<211> 18
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 245
ttgccccaag ctccatgc 18
<210> 246
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 246
ttcctttcct agcccagggg 20
<210> 247
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 247
atacccaggt gtcagtctag ca 22
<210> 248
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 248
agtggacaag actgcatctt cc 22
<210> 249
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 249
cagtgttgga ggcagttctg t 21
<210> 250
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 250
cacacctggt tcactccaca a 21
<210> 251
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 251
tcttgcagct tctgcttgaa gg 22
<210> 252
<211> 19
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 252
tcagggccct tgaaacccg 19
<210> 253
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 253
aaaatccggg gtggcaggtt 20
<210> 254
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 254
tcctggggaa gaaggtgagt aca 23
<210> 255
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 255
acccatagcg gtcactacca 20
<210> 256
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 256
ggatttgctc tcccctgaag tt 22
<210> 257
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 257
ttaagggagg ctggctggac 20
<210> 258
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 258
gttcatcagt aagcctcgct cag 23
<210> 259
<211> 19
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 259
actcgctctg agtgggtca 19
<210> 260
<211> 19
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 260
aaccaatccc ccttcccct 19
<210> 261
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 261
ctacaaatgt gcccttcctc ca 22
<210> 262
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 262
ctgagccttc ctgtgcttcc 20
<210> 263
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 263
ccatgaatgg ttgtcccaca ga 22
<210> 264
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 264
ttccgggatt ccaaagcctg 20
<210> 265
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 265
gcaatcggtg accctaatta cct 23
<210> 266
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 266
tcaccttctg gagaagagag gaa 23
<210> 267
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 267
cagggatcgt tctgcactag c 21
<210> 268
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 268
tgaccaagtt accccattgc c 21
<210> 269
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 269
caagtcagca ggaaagcaat cc 22
<210> 270
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 270
gatcaccatc actatcccac cc 22
<210> 271
<211> 16
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 271
tcgggcctcc tgggac 16
<210> 272
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 272
aggctcttac cctttcttct ttttct 26
<210> 273
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 273
ggcttctcca agactgttga ca 22
<210> 274
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 274
caacttgtgt tctctccctg tga 23
<210> 275
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 275
cctcaaaatg cccctttgtt cc 22
<210> 276
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 276
tgagtccaac cctcgtgtct at 22
<210> 277
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 277
agggagtagg gaagcaaaga ct 22
<210> 278
<211> 19
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 278
tagccacacc tgctgtcct 19
<210> 279
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 279
acactggtgt ccatgggaga 20
<210> 280
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 280
tcaggagggg agctgtttga 20
<210> 281
<211> 16
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 281
acgctgctgg cagtgg 16
<210> 282
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 282
gcttttctct cctccccctt tc 22
<210> 283
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 283
tgtcactgtc cggtaatcaa cc 22
<210> 284
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 284
tgtcactgtc cggtaatcaa cc 22
<210> 285
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 285
agttccttcc acgtcttgtt gg 22
<210> 286
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 286
cttcctttgc ctgcaattct gg 22
<210> 287
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 287
gctgtacgga ttattcccag ca 22
<210> 288
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 288
gacaatggcg tcgaatgtga tc 22
<210> 289
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 289
ggattcaggc aagagtgagt ga 22
<210> 290
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 290
ctcatttcct cagcagctgc ta 22
<210> 291
<211> 18
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 291
aggccccttc ttccccaa 18
<210> 292
<211> 19
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 292
actgcaagag aggccatgc 19
<210> 293
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 293
ttcagggtct cagcaggctt 20
<210> 294
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 294
ccaagaaggg gacttccaag ac 22
<210> 295
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 295
cttcaggtcg tcttccgata gg 22
<210> 296
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 296
acctctgtgg tggaggagtt 20
<210> 297
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 297
ctgcaggaca caaacaatct agg 23
<210> 298
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 298
ctgtgatcaa gtccacactg aac 23
<210> 299
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 299
agggctgcac cttctttaga ac 22
<210> 300
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 300
agctctgccc tttgccaatt 20
<210> 301
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 301
gagagcaata cccattgcaa cc 22
<210> 302
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 302
catgaatgtt caccccacgt tc 22
<210> 303
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 303
tggctcagag ggataagtga ga 22
<210> 304
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 304
gatctgagct gacctgtcct tt 22
<210> 305
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 305
tttcagcagg cagaggtaat gg 22
<210> 306
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 306
acctacctca caatcacagg gt 22
<210> 307
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 307
acaacatctt ggctccccag 20
<210> 308
<211> 18
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 308
ctgcaaacag ccagcctc 18
<210> 309
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 309
agggcatttc tcggtaacat cc 22
<210> 310
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 310
aaggccaaag acgttcagca 20
<210> 311
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 311
gagaacagac taatacaggc tggatc 26
<210> 312
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 312
gactggattc tctgccaatt tcct 24
<210> 313
<211> 18
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 313
cctccccatc cagccaca 18
<210> 314
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 314
agacagggct gtgctttgtc 20
<210> 315
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 315
gcatgactcc agcttggact c 21
<210> 316
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 316
gatcattcta ttctcccctc tcctca 26
<210> 317
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 317
ggaggagaaa tggtgcgaga ag 22
<210> 318
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 318
tctctccctc ttcccatctc ca 22
<210> 319
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 319
cctctctttc tgcccctccc 20
<210> 320
<211> 18
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 320
tgctgtcccc acaggcag 18
<210> 321
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 321
catggtgtgc atgtgtgatg tc 22
<210> 322
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 322
aggaagggat ggaagggatg aa 22
<210> 323
<211> 19
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 323
agtagcccac cctgtgtcc 19
<210> 324
<211> 17
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 324
gcggggaatg gagccac 17
<210> 325
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 325
ggtccaggac ttgctttatc ca 22
<210> 326
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 326
ctgatgtagg cagcacccat aa 22
<210> 327
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 327
tctaggaagg gctgtattgt cct 23
<210> 328
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 328
gagaaactct gacagatctc tggc 24
<210> 329
<211> 19
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 329
actgagccac ctctgctct 19
<210> 330
<211> 19
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 330
agagattggg gccacagga 19
<210> 331
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 331
tctttctgct gtgttgggct ac 22
<210> 332
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 332
ttccagttgt gtgcacaagg ag 22
<210> 333
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 333
cctgtccagt ctaacctgaa tctc 24
<210> 334
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 334
tgagaaaggt ggactctctc ca 22
<210> 335
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 335
acttgtgtaa ccccctggag a 21
<210> 336
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 336
tccaattttc tccacctcct gc 22
<210> 337
<211> 15
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 337
ccgtcgagcc cagcc 15
<210> 338
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 338
ggatggtgat gcacttggtg 20
<210> 339
<211> 19
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 339
cgaggtttgc tggggtgag 19
<210> 340
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 340
gagaaagagc aggagcgagc 20
<210> 341
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 341
tcgagatagg ccgtttgtat gtg 23
<210> 342
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 342
tggacaagtc acttcttgcc tc 22
<210> 343
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 343
tgatggtcta tatctgccac aacc 24
<210> 344
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 344
tctcacattc tagcaagttg gctta 25
<210> 345
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 345
ctctagagaa gaacgttcgt ggtt 24
<210> 346
<211> 27
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 346
atgggtctaa tctacatgag agacatc 27
<210> 347
<211> 29
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 347
tgattggtat taccttttaa gcagtcatg 29
<210> 348
<211> 32
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 348
aagggaaaaa aggtgatttc agaagatatt aa 32
<210> 349
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 349
gatcttttaa tgccttggca ttagct 26
<210> 350
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 350
tgcttactaa gcagaagcag tttaga 26
<210> 351
<211> 32
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 351
aaccttgaga ttttttctaa gaatctttct ct 32
<210> 352
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 352
tggtcctgat tgcagcaata tgt 23
<210> 353
<211> 30
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 353
gtttttgtcg ttgttgatgt ttatttcact 30
<210> 354
<211> 34
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 354
gttgtcatat cataaattaa gtctttcaac gtag 34
<210> 355
<211> 31
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 355
gaaacatgta atattgttga ttgtgttgag t 31
<210> 356
<211> 28
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 356
aggatgtttt catgacgtaa cattacag 28
<210> 357
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 357
gcccaaccga aatgttaatt ctgt 24
<210> 358
<211> 33
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 358
tgaaaattta aagcttaaat aatagaactg ctt 33
<210> 359
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 359
tgtctgaaag gaggttcatc ca 22
<210> 360
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 360
ctcatgacaa actactgggg ga 22
<210> 361
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 361
tcttatccag accaatggaa aatggt 26
<210> 362
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 362
agcagatctg aagaaaaaag gagagt 26
<210> 363
<211> 34
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 363
tggcagttgg ataatcattt aatatatctt tctc 34
<210> 364
<211> 31
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 364
tgtaaaaagg ggaaaagaaa gaataacttc t 31
<210> 365
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 365
acctaccaca tccaactcct tc 22
<210> 366
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 366
cttccaggat gatggcacag t 21
<210> 367
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 367
gctgaggtct ataaggccaa gc 22
<210> 368
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 368
gtactcctgt aggttgccct tg 22
<210> 369
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 369
tcacctccac agtgatcaca ct 22
<210> 370
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 370
ggtaaagggg atctagcact agct 24
<210> 371
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 371
ctgcacatgc cattctcagt ga 22
<210> 372
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 372
tctgccacct aagaggcaac tt 22
<210> 373
<211> 16
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 373
gccaggggtc cgggaa 16
<210> 374
<211> 17
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 374
ctgtcaagcg cagcgga 17
<210> 375
<211> 27
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 375
tcaaaacagt ttcactttcc tgtcatc 27
<210> 376
<211> 27
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 376
agtgagggag catgactaaa aatagaa 27
<210> 377
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 377
ccctcgcttc caatgaatct ct 22
<210> 378
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 378
aggtcccaca cccttaagag aa 22
<210> 379
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 379
gaagctgagt tcaacctggg aa 22
<210> 380
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 380
gatcttgact gccactgtct ca 22
<210> 381
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 381
gggaaacaat actggctgat cac 23
<210> 382
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 382
aggttaggtc gttcttcacg ag 22
<210> 383
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 383
aaatgatggg cctcactgtc tg 22
<210> 384
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 384
cactacacaa tgatgctggt cca 23
<210> 385
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 385
ggtgcccttt ggatctcttt cc 22
<210> 386
<211> 19
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 386
tgagaggggc agcctcttt 19
<210> 387
<211> 19
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 387
acaaatgcca gtcggtgct 19
<210> 388
<211> 17
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 388
agagccccca gcctctg 17
<210> 389
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 389
cagaacgagc tggacaagta cc 22
<210> 390
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 390
gacagacaat acagagaccc gc 22
<210> 391
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 391
gagcctaaca ctcctcttca ca 22
<210> 392
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 392
aaggcctagg gaaaagacat tga 23
<210> 393
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 393
tgtggttcat gtgttcagca ct 22
<210> 394
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 394
catcacacag ctgtgaaaga agc 23
<210> 395
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 395
cctttgtcca ttgtgggtaa gca 23
<210> 396
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 396
aagcctattg tgctaggagc tca 23
<210> 397
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 397
tcactgacta ggttgccatt gc 22
<210> 398
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 398
gtgttgggat gtgtcaagtc ca 22
<210> 399
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 399
gcactcttac aagtctatgg gctt 24
<210> 400
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 400
ggatttgtca cttggagttg ggta 24
<210> 401
<211> 33
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 401
aattttttat acaattttca ttccatttct gca 33
<210> 402
<211> 33
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 402
agcaaatgaa cacagtttta taaacaaata ttt 33
<210> 403
<211> 27
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 403
aagtaatatc tcttgtcgtg tctctca 27
<210> 404
<211> 32
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 404
ctgatggatt gtccctaaaa ataaaataat gg 32
<210> 405
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 405
cctaactgct tcccattagc cat 23
<210> 406
<211> 27
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 406
gatcattgtt gactgacata aacacca 27
<210> 407
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 407
ccgcccgaga aaaagtttcg 20
<210> 408
<211> 18
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 408
acctgtacgt ctgcggct 18
<210> 409
<211> 19
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 409
atcggagagg ggaggaagc 19
<210> 410
<211> 17
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 410
tctgcttctg cgcctgc 17
<210> 411
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 411
gccagtaaat cttccctctc ttgc 24
<210> 412
<211> 27
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 412
tgtgcagctg ataagatgaa aaaagaa 27
<210> 413
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 413
ctcctttgca ggatgttgtt cac 23
<210> 414
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 414
tcagggtgct gcatttcaga t 21
<210> 415
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 415
gaagaggctg agctgtttgg ta 22
<210> 416
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 416
actctgcatg tgttcctact gg 22
<210> 417
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 417
cctggaggtg gataaatcag aagag 25
<210> 418
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 418
ccaagaactc atgtgtgttg ctg 23
<210> 419
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 419
aaccctgttc cacagtcatg tc 22
<210> 420
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 420
aggaagcaga ggcgatcaaa ag 22
<210> 421
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 421
aactataatc tgggcccccc aa 22
<210> 422
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 422
agaccaacat gggcaactgt t 21
<210> 423
<211> 29
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 423
aggagcttaa gtatcttgtt tttctctct 29
<210> 424
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 424
gtgtagctgc atgctggtct at 22
<210> 425
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 425
agggggattg acatgataga atttcc 26
<210> 426
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 426
acgtgttcag aactctgcag aaa 23
<210> 427
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 427
tgcacttaaa aattccagct tggaa 25
<210> 428
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 428
ctgtgtctca gaaaaagctg tcttc 25
<210> 429
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 429
ccgcccgaga aaaagtttcg 20
<210> 430
<211> 18
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 430
acctgtacgt ctgcggct 18
<210> 431
<211> 19
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 431
atcggagagg ggaggaagc 19
<210> 432
<211> 17
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 432
tctgcttctg cgcctgc 17
<210> 433
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 433
gccagtaaat cttccctctc ttgc 24
<210> 434
<211> 27
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 434
tgtgcagctg ataagatgaa aaaagaa 27
<210> 435
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 435
ctcctttgca ggatgttgtt cac 23
<210> 436
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 436
tcagggtgct gcatttcaga t 21
<210> 437
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 437
gaagaggctg agctgtttgg ta 22
<210> 438
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 438
actctgcatg tgttcctact gg 22
<210> 439
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 439
cctggaggtg gataaatcag aagag 25
<210> 440
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 440
ccaagaactc atgtgtgttg ctg 23
<210> 441
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 441
aaccctgttc cacagtcatg tc 22
<210> 442
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 442
aggaagcaga ggcgatcaaa ag 22
<210> 443
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 443
aactataatc tgggcccccc aa 22
<210> 444
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 444
agaccaacat gggcaactgt t 21
<210> 445
<211> 29
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 445
aggagcttaa gtatcttgtt tttctctct 29
<210> 446
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 446
gtgtagctgc atgctggtct at 22
<210> 447
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 447
agggggattg acatgataga atttcc 26
<210> 448
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 448
acgtgttcag aactctgcag aaa 23
<210> 449
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 449
tgcacttaaa aattccagct tggaa 25
<210> 450
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 450
ctgtgtctca gaaaaagctg tcttc 25
<210> 451
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 451
agctgctgta gtagcagaaa cag 23
<210> 452
<211> 29
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 452
ggaaaaagaa atactgagga actctttgt 29
<210> 453
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 453
gtttctctct gaggcttgag gtt 23
<210> 454
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 454
ctctgtatgt aactgaccac catct 25
<210> 455
<211> 19
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 455
cagtcagaac caggcacca 19
<210> 456
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 456
acctagaggg gtagggagtt g 21
<210> 457
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 457
ttgtaggggt tgtaagggtc gt 22
<210> 458
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 458
atcctgctga tccgcgacaa 20
<210> 459
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 459
cccgttgttc tcccattgga t 21
<210> 460
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 460
ttccctcacg tgatttgagc c 21
<210> 461
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 461
ccaggcactg atttatccat tgg 23
<210> 462
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 462
catcaggcat ctctgctgtt ga 22
<210> 463
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 463
gaagagggcc tattgatctg caa 23
<210> 464
<211> 32
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 464
gcatattatt tatcatagtc tgaccacata cc 32
<210> 465
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 465
gaaatgaaaa gcaacccaaa agtacc 26
<210> 466
<211> 32
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 466
tggatgtttt atttgtagtt ttgtctttag tt 32
<210> 467
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 467
acgtcgagaa gccacatagc 20
<210> 468
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 468
gagaagttcc tgcgctcagt 20
<210> 469
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 469
cagcggtgac tccagatgag 20
<210> 470
<211> 15
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 470
acagcagccc ccgcg 15
<210> 471
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 471
tcacctttca gcaaaaccta agg 23
<210> 472
<211> 19
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 472
tcacagcagt tggaggctg 19
<210> 473
<211> 29
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 473
ctgtgtcttg tttaacttgt ttcttttcc 29
<210> 474
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 474
tctgttgttt ggtgccatta ttcaaa 26
<210> 475
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 475
gatgttgcat gcacttctaa atgc 24
<210> 476
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 476
actgaattcc tagaagagca acca 24
<210> 477
<211> 29
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 477
cacaatcctg atttcttact gtcaagatg 29
<210> 478
<211> 29
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 478
ggtaggttcc atatggaatt atcgactta 29
<210> 479
<211> 28
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 479
tgagcaccta cgtattcttt atttctct 28
<210> 480
<211> 31
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 480
tggacctttg ataccctaaa aataatgaat g 31
<210> 481
<211> 32
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 481
gtgttatgaa gaccaattag aaaaatacca tg 32
<210> 482
<211> 29
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 482
aggtaaattt cagaaaacaa gttaaggct 29
<210> 483
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 483
cccaactgtt cttacacatg tcaag 25
<210> 484
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 484
tgtcactttg ggttgtaatt gtgtg 25
<210> 485
<211> 28
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 485
tcagctttca tttagttgaa aaagagct 28
<210> 486
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 486
gcaatctaat gcttttctct tgcct 25
<210> 487
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 487
tctctacaaa gcataacact catcga 26
<210> 488
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 488
aagccagtaa tgtgtggatg agataa 26
<210> 489
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 489
gaatcctccc tgtgtttcaa cca 23
<210> 490
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 490
agctcctgga acacctggaa ta 22
<210> 491
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 491
cttcagggtg agacagccaa 20
<210> 492
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 492
actgcccatt tgtggtgcta g 21
<210> 493
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 493
gatgtgcaaa tctgaggctt cac 23
<210> 494
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 494
cacacactca aggataggcc aa 22
<210> 495
<211> 27
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 495
tgaggattag taaataccga ccacttc 27
<210> 496
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 496
agagagaagt cagaaggttg gaga 24
<210> 497
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 497
caggtcctcc cttttcttca ca 22
<210> 498
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 498
gacagtcaga tatgccgtga ca 22
<210> 499
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 499
aatgcactct gatatgggcc ta 22
<210> 500
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 500
accaaacatt tgcaatgatg ctc 23
<210> 501
<211> 30
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 501
ggtttaaaaa atgcatttga tttccttctg 30
<210> 502
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 502
cgattacttt ccaggagtgt tgc 23
<210> 503
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 503
gagaaaagca tagcattcaa gccat 25
<210> 504
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 504
tgcatccaaa agagagagac attttc 26
<210> 505
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 505
cctaaaggag atgacgcaca ct 22
<210> 506
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 506
agcaagatag agatcctggg ct 22
<210> 507
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 507
gagttcctgg ttttcaaagg ctt 23
<210> 508
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 508
ggaactagtg tctcaaatgc agc 23
<210> 509
<211> 34
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 509
tctctagtaa gtctcaaata aaattatttg aagt 34
<210> 510
<211> 17
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 510
cctgggcacc aggcgat 17
<210> 511
<211> 27
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 511
cactgtcaca taaagatgag ctaagtc 27
<210> 512
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 512
tggttaagtg atctctgaag gctac 25
<210> 513
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 513
cctgctgaga atgcatggat g 21
<210> 514
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 514
gagagccatt ttcaccacga tc 22
<210> 515
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 515
aactagttcc gtgtatgtct tctca 25
<210> 516
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 516
ttcctgaaca cgctggaaaa taaa 24
<210> 517
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 517
cccagtgctt tttaaggcct tc 22
<210> 518
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 518
ggatgtccac tggttccatc tt 22
<210> 519
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 519
caatgtattc ttagagtggc gactg 25
<210> 520
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 520
cttgagtgaa gtcataatct catcgg 26
<210> 521
<211> 33
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 521
actttattac tggattttat aaccaattcc cat 33
<210> 522
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 522
cctttcctac ctgaaaacca cca 23
<210> 523
<211> 31
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 523
gaaatgtttg atctgtttta tttgttccct a 31
<210> 524
<211> 27
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 524
ctgtgtaggt gaatttgcta tttcctt 27
<210> 525
<211> 30
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 525
gtaatgtcat gatcatgtac attttgtcct 30
<210> 526
<211> 30
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 526
gaacaagagg aacacatatg gagttaaatt 30
<210> 527
<211> 28
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 527
tttttcctca accagatcaa tgtagatc 28
<210> 528
<211> 27
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 528
cctaatacag ccattactca gatgact 27
<210> 529
<211> 30
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 529
tcaaaataaa catggtaaaa taagcctggt 30
<210> 530
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 530
actgcaacat ggaaacagga gaa 23
<210> 531
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 531
gttttgctca aatgggctgc t 21
<210> 532
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 532
gatgaaagca tgccagatcc ac 22
<210> 533
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 533
gcatttcttg catgtaaacc tttgtg 26
<210> 534
<211> 31
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 534
cactgttaca gctccatatg taaaatagtt c 31
<210> 535
<211> 29
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 535
actacagggc agaataatac ttaaaggaa 29
<210> 536
<211> 29
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 536
gtagcaagta attttcatgc catatctct 29
<210> 537
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 537
gcatatgggt gtgcaaaact gt 22
<210> 538
<211> 32
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 538
catgaacata tggaatattg ttgttttaga at 32
<210> 539
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 539
tccatgacac cagataacaa gagaag 26
<210> 540
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 540
tagcctttat gggaactagc gttc 24
<210> 541
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 541
tctcagttga aggtggtctg ga 22
<210> 542
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 542
cttccatttt gccctccttg gt 22
<210> 543
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 543
acatgaccag gaagcactag gt 22
<210> 544
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 544
cttgagtcaa gtgccccatg tt 22
<210> 545
<211> 28
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 545
ccagaatacg acttcaaaac atatgaca 28
<210> 546
<211> 27
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 546
actgttcctg tttaggataa tgtgtga 27
<210> 547
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 547
gaaagagcct gctattcagg act 23
<210> 548
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 548
gctaagcatg aagatttctg tgca 24
<210> 549
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 549
gaatgactag tgactcagga tggtag 26
<210> 550
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 550
ttggtatggt cacttaatgt tggttc 26
<210> 551
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 551
actgaagcca gtgggaaaca ac 22
<210> 552
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 552
gcttatgcag ccttctaatg gc 22
<210> 553
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 553
tggaagatga aatggaaaac cgaa 24
<210> 554
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 554
ctagtggttc acgtagagag gaag 24
<210> 555
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 555
catcttttcc aggagctccc tag 23
<210> 556
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 556
ttggccacct catcatgatc c 21
<210> 557
<211> 27
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 557
gcttccagaa gttggtacaa atatgtc 27
<210> 558
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 558
caactgcata tcagcaacaa actga 25
<210> 559
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 559
atgcaggcca tagctagatc ac 22
<210> 560
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 560
gttggcttga tgatggctcc ta 22
<210> 561
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 561
cccttgagca ttttgagctg tac 23
<210> 562
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 562
ctactgatgc aaaaccgact cag 23
<210> 563
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 563
gtacctggag agccctatta aacag 25
<210> 564
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 564
gatggctgga catctgtata ctagc 25
<210> 565
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 565
tgtcattctt cactttggga ctca 24
<210> 566
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 566
tgacgccaaa ctctaaaaaa tgacc 25
<210> 567
<211> 27
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 567
cacatctcag cagtataagt aaaagca 27
<210> 568
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 568
gagtggggta gtcagactac tcta 24
<210> 569
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 569
catttgtttg tagccctctc tcct 24
<210> 570
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 570
tggttcttat gcctttgagg attga 25
<210> 571
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 571
actctggcaa aacgtcctgt 20
<210> 572
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 572
cacttttgcc ttcccaatct cc 22
<210> 573
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 573
ggaggacctg ggaagataaa taactc 26
<210> 574
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 574
atggcagagc caactgtcta aac 23
<210> 575
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 575
gtacgactgt gtttaagaag atgcat 26
<210> 576
<211> 27
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 576
aggacgttga tgtatgtctt ttactgt 27
<210> 577
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 577
gcttcttgct gcattcagag aac 23
<210> 578
<211> 28
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 578
gtcttcaact gaactgaatt aagtgtgg 28
<210> 579
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 579
ctaatctgtt ctggtttgct tgtgt 25
<210> 580
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 580
tgacatgttt ttgcccagca ag 22
<210> 581
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 581
ggatcaatta tgagttggcc ctaaac 26
<210> 582
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 582
gaaggatatg gtgaagaaat agcctg 26
<210> 583
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 583
tcctcttcac gctcttcctg a 21
<210> 584
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 584
tctcaggaga acccacatgt ct 22
<210> 585
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 585
cagggaacaa cttgatggtg cta 23
<210> 586
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 586
actgattttc ccctttacac ccc 23
<210> 587
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 587
gatgtctgga agccagaacc at 22
<210> 588
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 588
gactttcatt cccttttagg ctcc 24
<210> 589
<211> 27
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 589
tctgataatg attgtgaatc accagga 27
<210> 590
<211> 30
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 590
gtgagacgta atatcgagta aagaaagaag 30
<210> 591
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 591
gcgagtgtca ttgctttgaa gc 22
<210> 592
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 592
ggaagaaaac accaccaatg gc 22
<210> 593
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 593
ggttccttcc aggaatacat acact 25
<210> 594
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 594
cttctgggat tctgacataa agcat 25
<210> 595
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 595
acctccagtg agtcttcagc at 22
<210> 596
<211> 29
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 596
cagtggaata ccttgtaaac aacttagaa 29
<210> 597
<211> 29
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 597
tctttttcta ggctctataa acttttcca 29
<210> 598
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 598
cttgacatgt gtaagaacag ttggg 25
<210> 599
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 599
actcatgacc agccattcag a 21
<210> 600
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 600
tggtcaacag agatgctaat gtg 23
<210> 601
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 601
gaagggtgaa gtggctaagt ga 22
<210> 602
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 602
gaagcacatg ctttcatgga gt 22
<210> 603
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 603
ctggcttctt ttgcattttg catg 24
<210> 604
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 604
cagtcaacag agaaaaaaca aggca 25
<210> 605
<211> 29
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 605
cagatctggt tatttcttga aaaaatgca 29
<210> 606
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 606
tgctgctttt cttttagatg ccc 23
<210> 607
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 607
gttgctatct aggttagtga aggcta 26
<210> 608
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 608
ctgtcttcat ttgtcttgcc tttct 25
<210> 609
<211> 29
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 609
gcatgcttta atcttctctt tatcaaacc 29
<210> 610
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 610
gaagaggaga ctgagttttg acca 24
<210> 611
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 611
gcgttcatct ccaaccttct ga 22
<210> 612
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 612
aagcattctt cctgccccac 20
<210> 613
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 613
gcttttctat aagccatgtt tgaggt 26
<210> 614
<211> 28
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 614
acagtgtgta ttctttttgt ttctgagt 28
<210> 615
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 615
gtggcctgat tcaaaatgat gca 23
<210> 616
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 616
ctaggtgaat ggaatgctgt gga 23
<210> 617
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 617
cctgagagtt actcctcttc ttgg 24
<210> 618
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 618
gaagtgcagg actgtcccat at 22
<210> 619
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 619
tggatgcaag acagtgacat gg 22
<210> 620
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 620
ccaaattgag gctcagggaa ct 22
<210> 621
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 621
cagctgagag attgctgttg ttg 23
<210> 622
<211> 27
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 622
gagagagagg gagagataga cagataa 27
<210> 623
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 623
tccaagggga aacacaaacc at 22
<210> 624
<211> 27
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 624
catgaatgct ctttctgaag tgtatga 27
<210> 625
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 625
caaaaggtga tgctggccaa c 21
<210> 626
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 626
cagtgatccc agcaatccca a 21
<210> 627
<211> 30
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 627
acctgaaaat aaagatatct gataacacca 30
<210> 628
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 628
ctacctggct ggttgaataa aaact 25
<210> 629
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 629
cctggtggca aggtataata aacac 25
<210> 630
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 630
agacagatgc tgcttttggg aa 22
<210> 631
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 631
gggggatttt ttagctgata gaaagc 26
<210> 632
<211> 27
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 632
gaagggattt tccaacaaaa tgaatgc 27
<210> 633
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 633
caggtccaca tgtttcagat gtct 24
<210> 634
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 634
atgcgctgtg tttctgaaaa ttgg 24
<210> 635
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 635
tgccccgtat tatggagatg aac 23
<210> 636
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 636
cgttcccatt ctaatctaag cagc 24
<210> 637
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 637
cacgtttggt ttggagagtc ca 22
<210> 638
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 638
gcatgccatc actttcagta gc 22
<210> 639
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 639
aaagaaggcc ctgaagctga tg 22
<210> 640
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 640
ttccctgcaa tgaatcagta gatgc 25
<210> 641
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 641
ggtgctcatt gtcgatgtgt ct 22
<210> 642
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 642
tgtctgggaa ggttgctgtc ta 22
<210> 643
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 643
gtcatttgcc cctttgagaa cc 22
<210> 644
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 644
aacccttcag tcttgtgtat gaca 24
<210> 645
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 645
caggttttac gtggtacact gga 23
<210> 646
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 646
cgtaaggggc actctcactt aaa 23
<210> 647
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 647
ccgcctgatc ttcagtaaac tca 23
<210> 648
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 648
gagtgtctca ttggaactcc ctatg 25
<210> 649
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 649
gaagatgagc caactccagc tt 22
<210> 650
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 650
gagaatggca caatgcagga tc 22
<210> 651
<211> 31
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 651
gttcaagctt gaggaatttc atatttttca g 31
<210> 652
<211> 30
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 652
acgtattgtt gacatcctgt atctatgtaa 30
<210> 653
<211> 27
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 653
tcagaagtgt attggaacta tcaggaa 27
<210> 654
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 654
cacaggtgta aaacatgctg tcat 24
<210> 655
<211> 27
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 655
gagataaaat attgaccgat gcagcta 27
<210> 656
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 656
actgaaaaac ctgtaaagct gtacc 25
<210> 657
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 657
tcagtgactt gtctcactaa gttgac 26
<210> 658
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 658
aaggcttcag tcttcctgtg aaaa 24
<210> 659
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 659
agcaaaagag gctgaatgta cact 24
<210> 660
<211> 34
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 660
tgtctataag tcttataatc aattgcttgt ttgt 34
<210> 661
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 661
gctcaatctc acactaaaga acacca 26
<210> 662
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 662
tctcctccta cacagtgacc aat 23
<210> 663
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 663
tcctagccca gctagaaaag ga 22
<210> 664
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 664
gagaaaatgc acagtgtgag gc 22
<210> 665
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 665
cattctcaca ccatcatgcg tt 22
<210> 666
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 666
cagtagaagc catttctcag aaaca 25
<210> 667
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 667
gagccagcaa tgtatagtgt tgc 23
<210> 668
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 668
agtcttggag accccatgaa ttg 23
<210> 669
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 669
acctcctcca aatgaggatc atg 23
<210> 670
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 670
gtgacacttt gggtgatgct atg 23
<210> 671
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 671
tcaggagcac ttctcccctt 20
<210> 672
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 672
catgcatctg ctttgcctcg 20
<210> 673
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 673
agggaacctg caagcatttc tc 22
<210> 674
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 674
gatgggtctt tctggtaact gtcc 24
<210> 675
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 675
catgttatta ctcttggccc tcgt 24
<210> 676
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 676
agactgctac ctgtgtctct actt 24
<210> 677
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 677
tctgggctgg ttcttaaata tgct 24
<210> 678
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 678
ttggcctctt tcagtatttg ggt 23
<210> 679
<211> 28
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 679
gtccatcaac tttttattcc aagtgtct 28
<210> 680
<211> 32
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 680
gtctaaaatg taatcttatc ctgtcttgtc tc 32
<210> 681
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 681
ctgtgcttgt ctatcagctg gt 22
<210> 682
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 682
gtgatgtatc ggttgtaggc ttct 24
<210> 683
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 683
agagcctgtt cactaaacca cag 23
<210> 684
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 684
gttgctggaa aactgtgtac tagc 24
<210> 685
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 685
acctgaatgg aaaatgagga aaggta 26
<210> 686
<211> 32
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 686
gtctcaataa tgttttgaat tgtattactg gc 32
<210> 687
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 687
gcagtcatgt cacagagacc tt 22
<210> 688
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 688
tggagaatgt catcatcccc ct 22
<210> 689
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 689
cctgtacgtg acatcaaaca atgc 24
<210> 690
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 690
acactccctt gccattaaga agtc 24
<210> 691
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 691
tgctgcaaag caatgtctaa cttg 24
<210> 692
<211> 26
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 692
tgacctctct gaatatctgc agaaac 26
<210> 693
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 693
ctttcaaacg tttcagagca cagt 24
<210> 694
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 694
ccttttgaat tctgcttact gctga 25
<210> 695
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 695
gcaggtttcc aaatgtccct gt 22
<210> 696
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 696
gtgtttggct ccttggaagg tt 22
<210> 697
<211> 27
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 697
cctgaaactt acccataagt cttgaac 27
<210> 698
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 698
actcacctca caaatatctg tgtgt 25
<210> 699
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 699
atggaccagt tcatgcgcaa 20
<210> 700
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 700
gaagaagggc ggcatgtcta tt 22
<210> 701
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 701
atagttctgt gccaggcatc tc 22
<210> 702
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 702
caagttcccc acaggagaca aa 22
<210> 703
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 703
gaatgccaac tcagcctttt ctc 23
<210> 704
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 704
catcttggga ggaaaagaga gagtg 25
<210> 705
<211> 29
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 705
gtgaagctaa atgtttatta cccaaatgc 29
<210> 706
<211> 29
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 706
tgcaattact tggttttact tttctttcc 29
<210> 707
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 707
tgttgtctct cctctcctgt gt 22
<210> 708
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 708
catcgttgtc gtcgtcatca tc 22
<210> 709
<211> 30
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 709
caaacaactc tccttgatct atactttgag 30
<210> 710
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 710
actggtgagc ttcagcttgc 20
<210> 711
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 711
aagagtacta cgccaaggag gt 22
<210> 712
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 712
aaggacagga gaacgggaaa ag 22
<210> 713
<211> 24
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 713
agtcttctct gaaagcacaa tgga 24
<210> 714
<211> 27
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 714
caacaacaac aacaacaaca acaaatg 27
<210> 715
<211> 25
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 715
cctcccaaga tgttcagtat cccta 25
<210> 716
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 716
ttccctcccc cacctcatat g 21
<210> 717
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 717
gtgagggtgg tgaatcagct t 21
<210> 718
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 718
atggtaaccc aagaacagag gc 22
<210> 719
<211> 19
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 719
ccagtgcctc agatggcat 19
<210> 720
<211> 29
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 720
gagagcattc atgaagtttc ttttattgg 29
<210> 721
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 721
tcttgaggtc tggtaagggt ct 22
<210> 722
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 722
ccatcacaca gaggtgcttt tc 22
<210> 723
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 723
tggtttctgc tctgagagag ga 22
<210> 724
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 724
agcacactgt tcctgcatgt 20
<210> 725
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 725
tgatagggga cgtgggtcat c 21
<210> 726
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 726
tctcttcctc tccaggcctt g 21
<210> 727
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 727
aggcagtggt ggttctctct 20
<210> 728
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 728
ccaacctctc actgacatgt cc 22
<210> 729
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 729
agtaggcagg cagtagatgt tg 22
<210> 730
<211> 23
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 730
aggagattgt cactttcctt ccc 23
<210> 731
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 731
agggacctga ggttcattct ga 22
<210> 732
<211> 22
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 732
ctgtgctctg cattgtgaca tc 22
<210> 733
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 733
acaccccagc gagaatttgg 20
<210> 734
<211> 21
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 734
tggaagccat taggggacag a 21

Claims (5)

1. A method for detecting familial thoracic aortic aneurysm and dissecting associated mutant gene based on high throughput sequencing technology comprises the steps of,
(1) collecting samples:
selecting 12 pathogenic genes ACTA2, FBN1, MYH11, MYLK, SMAD3, TGFBR1, TGFBR2, PRKG1, LOX, COL3A1, TGFB2 and TGFB3 related to the familial thoracic aortic aneurysm and interlayer related genes;
(2) the panel design:
the kit consists of 7 tubes of reagents,
wherein 5 tubes of reagents are stored at-20 ℃ and comprise 1 tube of IGT-I7Index (10uM) reagent, 1 tube of IGT-I5 Index (10uM) reagent, 1 tube of Primer pool reagent, 1 tube of IGT-EM808 polymerase mix reagent and 1 tube of Enhancer buffer NB (1N) reagent;
the other 2 tubes of reagents are stored at 4 ℃ and comprise 1 tube of Enhancer buffer M reagent and 1 tube of YF buffer B reagent;
in the designed kit, the Primer pool reagent contains 367 amplicons, the sequence of each amplicon is 1-367, each amplicon comprises a forward Primer and a reverse Primer, and the sequences of the forward Primer and the reverse Primer are SEQ ID No.1-SEQ ID No. 734;
(3) library construction:
(3.1) 1 st round of multiplex PCR reaction
Preparing reaction liquid in a PCR tube according to the formula shown in the table below, and gently blowing, sucking and mixing the reaction liquid up and down by using a gun;
Figure FDA0002785960520000011
operating a PCR instrument, putting the PCR tube into the PCR tube, and carrying out reaction according to the following procedures: the cycle was performed after first 95 ℃ for 210 s: circulating for 18 times at 98 deg.C for 10s and 60 deg.C for 5min, and extending for 5min at 72 deg.C;
(3.2) purification of the product by magnetic beads
(3.2.1) adding 27ul of AMPure XP magnetic beads which are balanced at room temperature into 30ul of PCR products processed in the step (3.1), and sucking and uniformly mixing the products for 20 times by using a pipette;
(3.2.2) after incubating for 5min at room temperature, placing the PCR tube on a DynaMag-96Side magnetic frame for 3 min;
(3.2.3) completely removing the supernatant, taking down the PCR tube from the magnetic rack, adding 50ul YF buffer B into the tube, and sucking and mixing the mixture by a pipettor for 20 times;
(3.2.4) after incubating for 5min at room temperature, placing the PCR tube on a DynaMag-96Side magnetic frame for 3 min;
(3.2.5) removing the supernatant, placing the PCR tube on a magnetic frame, adding 180ul of 80% ethanol solution with volume percentage concentration into the PCR tube, and standing for 30 s;
(3.2.6) removing the supernatant, continuously placing the PCR tube on a magnetic frame, adding 180ul of ethanol solution with the volume percentage concentration of 80%, standing for 30s, and completely removing the supernatant;
(3.2.7) standing at room temperature for 3min to completely volatilize residual ethanol;
(3.2.8) removing the PCR tube from the magnetic frame, adding 24. mu.l of nucleic-free water, pipetting to gently pipette the resuspended beads to avoid air bubbles, and standing at room temperature for 2 min;
(3.2.9) putting the PCR tube on the magnetic frame again, and standing for 3 min;
(3.2.10) pipetting 13.5. mu.l of the supernatant and transferring the supernatant into a new 200. mu.l PCR tube, wherein the supernatant transferred into the tube is a multiplex PCR product;
(3.3) round 2 adaptor sequence PCR reaction
The reaction solution was prepared in a PCR tube according to the following formulation, and gently mixed by up-and-down blowing and sucking with a gun. Wherein the PCR product mix is the purified multiplex PCR product obtained in the step (3.2.10);
Figure FDA0002785960520000021
Figure FDA0002785960520000031
operating the PCR instrument, putting the PCR tube into the PCR tube, and carrying out reaction according to the following program: the cycle was performed after first 95 ℃ for 210 s: circulating at 98 deg.C for 20s, 68 deg.C for 1min, and 72 deg.C for 30s for 9 times, and extending at 72 deg.C for 5 min;
(3.4) round 2 magnetic bead purification
(3.4.1) taking 30ul of the PCR reaction system treated in the step (3.3), adding 27ul of AMPure XP magnetic beads balanced at room temperature, and sucking and uniformly mixing the mixture for 20 times by using a pipette;
(3.4.2) after incubating at room temperature for 5min, placing the PCR tube on a DynaMag-96Side magnetic frame for 3 min;
(3.4.3) completely removing the supernatant, taking down the PCR tube from the magnetic rack, adding 50ul YF buffer B into the PCR tube, and sucking and mixing the mixture for 20 times by using a pipettor;
(3.4.4) after incubating for 5min at room temperature, the PCR tube was placed on a DynaMag-96Side magnetic frame for 3 min;
(3.4.5) removing the supernatant, continuously placing the PCR tube on a magnetic frame, adding 180ul of 80% ethanol solution in volume percentage into the PCR tube, and standing for 30 s;
(3.4.6) removing the supernatant, continuously placing the PCR tube on a magnetic frame, adding 180ul of 80% ethanol solution in volume percentage into the PCR tube, standing for 30s, and completely removing the supernatant;
(3.4.7) standing at room temperature for 3min to completely volatilize residual ethanol;
(3.4.8) removing the centrifuge tube from the magnetic frame, adding 24 μ l of nucleic-free water or 1 × TE buffer (pH8.0), pipetting and mixing for 20 times, resuspending the magnetic beads to avoid generating bubbles, and standing at room temperature for 2 min;
(3.4.9) putting the PCR tube on the magnetic frame again, and standing for 3 min;
(3.4.10) pipetting 20. mu.l of the supernatant and transferring the supernatant into a new 200. mu.l PCR tube, wherein the supernatant transferred into the tube is the prepared multiplex PCR library;
(3.5) library quantification
The multiplex PCR library obtained in 2ul step (3.4.10) was taken and used
Figure FDA0002785960520000032
3.0fluorometer (qubit dsDNA HS Assay kit) to perform library concentration determination and record library concentration; the concentration range of a normal library constructed by human genome DNA is 5-40 ng/ul;
(4) sequencing on machine
Sequencing the qualified multiplex PCR library obtained in the step (3.6) by using Hiseq Xten PE150 to obtain a gene sequence table, wherein the computer-operated data volume is 300 Mb;
(5) data analysis annotation: after the sequencing data is downloaded, performing bioinformatics analysis on the downloaded data, and detecting variation on genes;
(5.1) the quality control of the off-line data Fastq format: for each pair of original Fastq sequence raw reads generated by each sample library and lane, removing a sequencing joint and sequence reads containing a large number of 'N' bases by using software cutAdpt to obtain sequence Clean reads meeting quality control, and counting basic information of the sequence Clean reads by using software fastqc, wherein the basic information comprises the number of sequences and bases, GC content and distribution, sequencing error rate and distribution and base quality distribution;
(5.2) Alignment: using software bwa, aligning the sequence Clean reads with a human reference genome GRCh38 to obtain an alignment information file BAM of the sequence Clean reads on the reference genome;
(5.3) BAM preprocessing of the comparison information file: combining BAM files of comparison information files generated by different libraries and Lane of the same sample together by using picard and GATK software, sequencing according to genome coordinates, verifying the BAM files of the comparison information files, removing a repetitive sequence generated in the PCR process, correcting a base quality value, and obtaining a Clean BAM of the comparison file after pretreatment; counting and comparing the file Clean BAM by using the picard software to obtain quality control information; the quality control information comprises coverage, depth, capture efficiency and uniformity of a target region capture chip, the number of comparable sequences and bases, and the length distribution of insert fragments;
(5.4) mutation detection: detecting small fragment variation on the gene by using GATK software, wherein the small fragment variation comprises Single Nucleotide Polymorphism (SNP) and insertion and deletion indels; and (3) filtering the detected variation, wherein the SNP filtering conditions are as follows: QD <3.37| | FS >31.397| | SOR >10.419| | MQ <20.0| | MQRankSum < -12.49| | ReadPosRankSum < -3.721, and the Indel filtering conditions are as follows: QD <5.2| | FS >52.254| | SOR >9.044| | ReadPosRankSum < -5.504;
annotating the variations that meet the filtering conditions, and noting the corresponding genes, transcripts, variation types, functions, and frequencies in normal populations;
and (5) counting variation results to obtain variation quantity, length distribution, various type variation quantity and crowd variation frequency information.
2. The method for detecting familial thoracic aortic aneurysm and dissection related mutant gene as claimed in claim 1, wherein the concentration of gDNA to be detected is diluted to the same concentration before step (3.1), and then transferred to PCR8 tube.
3. The method for detecting familial thoracic aortic aneurysm and dissection related mutant gene as claimed in claim 1 or 2, further comprising the step (3.6) of library quality detection after the step (3.5),
taking 1ul of the multiple PCR library obtained in the step (3.4), and measuring the length and purity of the library fragment by using a Qsep100 full-automatic nucleic acid protein analysis system, wherein the target fragment distribution interval of the normal library is between 300bp and 420 bp;
performing library detection on the multiplex PCR library obtained in the step (3.4) by using align 2100 and QPCR;
the result of the multiple PCR library Aligent 2100 fragment obtained in the step (3.4) is qualified when the result is between 250bp and 350bp, and the result of QPCR is qualified when the result is more than 10 nM;
and (4) sequencing the qualified multiplex PCR library in the step (4) to obtain a gene sequence table.
4. The method for detecting familial thoracic aortic aneurysm and dissection associated mutant gene of claim 1 or 2, further comprising the step of (6) mutational interpretation: explaining the relationship between variant SNPs and variant indels and diseases;
variants were classified into 5 classes by using the software REO-HIT according to the ACMG/AMP guidelines: pathogenic, suspected pathogenic, unknown meaning, suspected benign, benign.
5. The method for detecting familial thoracic aortic aneurysm and dissection related mutant genes as claimed in claim 4, further comprising the step of (7) providing a report, verifying the sequencing results of the above-detected pathopoiesia, suspected pathopoiesia, unknown significance and suspected benign by Sanger sequencing one by one, and providing the report.
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