CN112481233B - Enzyme preparation for preparing citicoline and method for preparing citicoline through enzyme catalysis - Google Patents

Enzyme preparation for preparing citicoline and method for preparing citicoline through enzyme catalysis Download PDF

Info

Publication number
CN112481233B
CN112481233B CN202011148184.8A CN202011148184A CN112481233B CN 112481233 B CN112481233 B CN 112481233B CN 202011148184 A CN202011148184 A CN 202011148184A CN 112481233 B CN112481233 B CN 112481233B
Authority
CN
China
Prior art keywords
kinase
cytidine
escherichia coli
citicoline
enzyme
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Active
Application number
CN202011148184.8A
Other languages
Chinese (zh)
Other versions
CN112481233A (en
Inventor
范晓光
胡晨龙
宋雪静
安俊侠
谢希贤
徐庆阳
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Tianjin University of Science and Technology
Original Assignee
Tianjin University of Science and Technology
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Tianjin University of Science and Technology filed Critical Tianjin University of Science and Technology
Priority to CN202011148184.8A priority Critical patent/CN112481233B/en
Publication of CN112481233A publication Critical patent/CN112481233A/en
Application granted granted Critical
Publication of CN112481233B publication Critical patent/CN112481233B/en
Active legal-status Critical Current
Anticipated expiration legal-status Critical

Links

Images

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/10Transferases (2.)
    • C12N9/12Transferases (2.) transferring phosphorus containing groups, e.g. kinases (2.7)
    • C12N9/1205Phosphotransferases with an alcohol group as acceptor (2.7.1), e.g. protein kinases
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/63Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/70Vectors or expression systems specially adapted for E. coli
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/10Transferases (2.)
    • C12N9/12Transferases (2.) transferring phosphorus containing groups, e.g. kinases (2.7)
    • C12N9/1229Phosphotransferases with a phosphate group as acceptor (2.7.4)
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/10Transferases (2.)
    • C12N9/12Transferases (2.) transferring phosphorus containing groups, e.g. kinases (2.7)
    • C12N9/1241Nucleotidyltransferases (2.7.7)
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12PFERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
    • C12P19/00Preparation of compounds containing saccharide radicals
    • C12P19/26Preparation of nitrogen-containing carbohydrates
    • C12P19/28N-glycosides
    • C12P19/30Nucleotides
    • C12P19/305Pyrimidine nucleotides
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12YENZYMES
    • C12Y207/00Transferases transferring phosphorus-containing groups (2.7)
    • C12Y207/01Phosphotransferases with an alcohol group as acceptor (2.7.1)
    • C12Y207/01032Choline kinase (2.7.1.32)
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12YENZYMES
    • C12Y207/00Transferases transferring phosphorus-containing groups (2.7)
    • C12Y207/04Phosphotransferases with a phosphate group as acceptor (2.7.4)
    • C12Y207/04001Polyphosphate kinase (2.7.4.1)
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12YENZYMES
    • C12Y207/00Transferases transferring phosphorus-containing groups (2.7)
    • C12Y207/04Phosphotransferases with a phosphate group as acceptor (2.7.4)
    • C12Y207/04006Nucleoside-diphosphate kinase (2.7.4.6)
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12YENZYMES
    • C12Y207/00Transferases transferring phosphorus-containing groups (2.7)
    • C12Y207/04Phosphotransferases with a phosphate group as acceptor (2.7.4)
    • C12Y207/04025(d)CMP kinase (2.7.4.25)
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12YENZYMES
    • C12Y207/00Transferases transferring phosphorus-containing groups (2.7)
    • C12Y207/07Nucleotidyltransferases (2.7.7)
    • C12Y207/07015Choline-phosphate cytidylyltransferase (2.7.7.15)

Landscapes

  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Engineering & Computer Science (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Biochemistry (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biomedical Technology (AREA)
  • Microbiology (AREA)
  • Medicinal Chemistry (AREA)
  • Plant Pathology (AREA)
  • Biophysics (AREA)
  • Physics & Mathematics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • General Chemical & Material Sciences (AREA)
  • Micro-Organisms Or Cultivation Processes Thereof (AREA)

Abstract

The invention relates to an enzyme preparation for preparing citicoline, which comprises the following preparation steps: constructing engineering bacteria Escherichia coli CKI-CCT to express choline kinase and phosphorylcholine cytidine transferase derived from Fusobacterium nucleatum; constructing engineering bacteria Escherichia coli PPK-UDK to express polyphosphate kinase derived from rhodobacter sphaeroides and cytidine kinase derived from thermus thermophilus; constructing engineering bacteria Escherichia coli CMK-NDK to express cytidine kinase and nucleoside diphosphate kinase derived from Escherichia coli; and (3) crushing enzyme-producing cells obtained by fermentation, centrifuging and collecting supernatant to obtain crude enzyme liquid. The invention reports that the phosphocholine cytidine transferase from fusobacterium nucleatum can be used for synthesizing citicoline for the first time, and the heterologous soluble expression quantity and the enzyme activity of the phosphocholine cytidine transferase from fusobacterium nucleatum are higher.

Description

Enzyme preparation for preparing citicoline and method for preparing citicoline through enzyme catalysis
Technical Field
The invention belongs to the technical field of compound biology, and particularly relates to an enzyme preparation for preparing citicoline and a method for preparing the citicoline through enzyme catalysis.
Background
Citicoline is an important precursor of lecithin synthesis in organisms. Citicoline was first developed by Wuta pharmaceutical industry, japan, under the trade name "Nicholin" (Nicolin), and it has been recorded in the Chinese pharmacopoeia as a cell metabolism improving agent. Citicoline is a nerve activator with the largest clinical dosage, can promote the biosynthesis of lecithin, recover the function of nerve tissues and improve the metabolism and circulation of brain, can be used for recovering the disturbance of consciousness caused by acute craniocerebral trauma and brain surgery, and can be used for the adjuvant treatment of Parkinson's syndrome and senile dementia. Citicoline is a precursor of lecithin biosynthesis and as brain function decreases, the lecithin content in brain tissue decreases significantly. Supplementing exogenous citicoline can activate the biosynthesis of lecithin, stimulate the excitation of brain stem network structure, raise reviving threshold, restore nerve tissue function, improve brain metabolism and nerve conduction and raise consciousness level of patient.
The existing preparation method of citicoline is mainly a chemical synthesis method. The general method is to condense cytidine-5' -phospho-morphine and choline phosphate hydrochloride in acetonitrile or pyridine to form citicoline. Among them, cytidine-5' -phospho-morpholine can be obtained by a process of dehydrating condensation of CMP and morpholine in DCC (Chemical and Pharmaceutical Bulletin,1971,19 (5): 1011-1016.) or by selective phosphorylation of cytidine (Journal of Chemical Research,2016,40 (6): 358-360.). However, the raw materials and condensing agents used in the above synthetic routes are expensive, and the reaction needs to be completed in toxic organic solvents, resulting in low synthesis yield of citicoline and high production cost.
Most of the domestic production in recent years is reported as biotransformation, various microorganisms are used as biocatalysts, and Cytidine transferase (CCT, EC 2.7.7.15) of choline phosphate in the microorganisms is used as substrates, so that Cytidine Triphosphate (CTP) and choline phosphate can be directly synthesized into citicoline. Zhanguyu et al (J.Med.Med., 1987,18 (6): 252-255.) biosynthesized citicoline using resting cells of Hansenula anomala as a biocatalyst using Cytidine Monophosphosphate (CMP) and phosphorylcholine; patent application No. 201210066604.7 reports the biosynthesis of CMP in a culture solution containing multiple microorganisms with simple raw materials of carbon and nitrogen sources and the cumulative production of citicoline. With the development of molecular biology technology, genetic engineering technology becomes a new means for improving citicoline-producing strains. Patent 201310167034.5 reports that CCT enzyme is heterologously expressed and immobilized by using escherichia coli engineering bacteria, and citicoline is biosynthesized by taking phosphorylcholine and CTP as raw materials; patent application No. 201510702581.8 reports biosynthesis of citicoline using orotic acid and phosphorylcholine using an engineered genetically engineered escherichia coli strain as biocatalyst. The GDN Tongxin et al (pharmaceutical biotechnology, 2018,25 (04): 294-298) improve the conversion rate and yield of citicoline by over-expressing CCT enzyme which is a key reaction enzyme in yeast, and take CMP and phosphorylcholine as raw materials to prepare citicoline by biotransformation, and the molar conversion rate can reach 73.1 percent after 7h of reaction.
In the aspect of biological method preparation of citicoline, a multienzyme catalytic system is mainly adopted abroad, and target products are obtained through different reaction ways. For example, in the commonly used CMP-glucose-Saccharomyces Cerevisiae (CGS) pathway, CMP and choline chloride (or phosphorylcholine) are used as substrates, the CMP and choline are converted into citicoline using permeabilized Saccharomyces cerevisiae cells (Journal of fermentation Technology,1974,52, 637-645), and ATP is continuously provided for the reaction via the glycolysis pathway (Bioresource Technology,2009,100 (20): 4848-4853). The maximum accumulation, molar yield, and reaction rate of the product reach 26.9mM, 82.3%, and 1.11mmol L, respectively -1 ﹒h -1 (Bioresource Technology,2010,101 (22): 8807-8813). In the orotate-glucose-ammonia producing corynebacterium-e.coli (OGCE) pathway, orotic acid and choline chloride are used as catalytic substrates, firstly, the orotic acid is converted into UTP by using the permeabilized corynebacterium ammoniagenes cells and the glucose is decomposed to generate ATP, and then the UTP and choline chloride are converted into citicoline by using recombinant e.coli over-expressing CTP Synthase (CTPs), phosphorylcholine cytidylyltransferase (CCT) and Choline Kinase (CKI), and the accumulation amount, molar yield and reaction rate of the product reach 21.6mM, 45.7% and 0.94mmol L respectively -1 ﹒h -1 (Journal of the Agricultural Chemical Society ofJapan,1997,61(6):956–959)。
The application is particularly provided in view of the problems of toxic reagents and low synthesis yield existing in the existing chemical method and the problems of overhigh raw material cost, low conversion rate and reaction rate and the like existing in the multi-enzyme catalysis method.
Disclosure of Invention
The invention aims to overcome the defects in the prior art and provides an enzyme preparation for preparing citicoline and a method for preparing the citicoline through enzyme catalysis.
The technical scheme adopted by the invention for solving the technical problem is as follows:
an enzyme preparation for preparing citicoline is prepared by the following steps:
firstly, constructing an engineering bacterium Escherichia coli CKI-CCT to express choline kinase and phosphorylcholine cytidine transferase derived from fusobacterium nucleatum, wherein the choline kinase can catalyze choline chloride to form phosphorylcholine, and the phosphorylcholine cytidine transferase can catalyze the phosphorylcholine and CTP to form citicoline; constructing engineering bacteria Escherichia coli PPK-UDK to express polyphosphate kinase derived from rhodobacter sphaeroides and cytidine kinase derived from thermus thermophilus, wherein the polyphosphate kinase can be used for catalyzing ATP regeneration, and the cytidine kinase can be used for catalyzing cytidine to form CMP; constructing engineering bacteria Escherichia coli CMK-NDK to express cytidine kinase and nucleoside diphosphate kinase derived from Escherichia coli, wherein the cytidine kinase can be used for catalyzing CMP to form CDP, and the nucleoside diphosphate kinase can be used for catalyzing CDP to form CTP;
secondly, crushing enzyme-producing cells obtained by fermentation, centrifuging at 13000rpm for 2min, and collecting supernatant to obtain crude enzyme solution, namely the enzyme preparation for preparing the citicoline.
Moreover, the specific preparation steps are as follows:
the method comprises the steps of expressing heterologous choline kinase and phosphorylcholine cytidine transferase coding genes in Escherichia coli E.coli BL21 (ACCC 11171) to construct a strain Escherichia coli CKI-CCT with choline kinase activity and phosphorylcholine cytidine transferase activity;
secondly, expressing heterologous polyphosphate kinase and cytidine kinase coding genes in Escherichia coli BL21 (ACCC 11171) to construct a strain Escherichia coli PPK-UDK with polyphosphate kinase and cytidine kinase activities;
thirdly, endogenous cytidylic acid kinase and diphosphokinase encoding genes are expressed in Escherichia coli E.coli BL21 (ACCC 11171), and a strain Escherichia coli CMK-NDK with cytidylic acid kinase and diphosphokinase activities is constructed;
fourth, the constructed recombinant strains Escherichia coli CKI-CCT, escherichia coli PPK-UDK and Escherichia coli CMK-NDK are respectively cultured in a culture medium, choline kinase, phosphorylcholine cytidyltransferase, polyphosphate kinase, cytidine kinase, diphosphate kinase and cytidylate kinase with high enzyme activity are induced to generate, and enzyme-producing cells are collected in a centrifugal mode;
fifthly, the enzyme-producing cells Escherichia coli CKI-CCT, escherichia coli PPK-UDK and Escherichia coli CMK-NDK obtained through culture in the fourth step are resuspended in a balance buffer solution and subjected to cell disruption, and the disrupted solution is centrifuged at 13000r/min for 20min to obtain supernatant, namely the crude enzyme solution.
In the first step, pET-Duet plasmids are used as vectors to over-express choline kinase and phosphorylcholine cytidine transferase genes in E.coli BL21, and a strain E.coli CKI-CCT with choline kinase activity and phosphorylcholine cytidine transferase activity is constructed; wherein the choline kinase coding gene is derived from Fusobacterium nucleatum (ATCC 25586), and amplification primers of the choline kinase coding gene are SEQ ID NO.1 and SEQ ID NO.2; the coding gene of the phosphorylcholine cytidine transferase is derived from Fusobacterium nucleatum (ATCC 25586), and amplification primers of the coding gene are SEQ ID NO.3 and SEQ ID NO.4; the nucleotide sequence of the plasmid pET-Duet is SEQ ID NO.13;
in the second step, pET-Duet plasmids are used as vectors to over-express polyphosphate kinase and cytidine kinase genes in E.coli BL21, and a strain E.coli PPK-UDK with the activity of polyphosphate kinase and cytidine kinase is constructed; wherein the polyphosphate kinase coding gene is derived from Rhodobacter sphaeroides (CGMCC 1.5028), and amplification primers of the polyphosphate kinase coding gene are SEQ ID NO.5 and SEQ ID NO.6; the cytidine kinase coding gene is derived from Thermus thermophilus (ATCC 27634), and amplification primers of the cytidine kinase coding gene are SEQ ID NO.7 and SEQ ID NO.8; the nucleotide sequence of the plasmid pET-Duet is SEQ ID NO.13;
in the step three, overexpression of cytidylic acid kinase and diphosphokinase genes in E.coli BL21 is carried out by taking pET-Duet plasmid as a vector, and a strain E.coli CMK-NDK with cytidylic acid kinase activity and diphosphokinase activity is constructed; wherein the gene encoding the cytidylic acid kinase is derived from Escherichia coli K12 (ATCC 10798), and amplification primers of the gene are SEQ ID NO.9 and SEQ ID NO.10; the diphosphate kinase coding gene is derived from Escherichia coli K12 (ATCC 10798), and amplification primers of the diphosphate kinase coding gene are SEQ ID NO.11 and SEQ ID NO.12; the nucleotide sequence of the plasmid pET-Duet is SEQ ID NO.13.
In the step four, the specific steps of culturing the recombinant strain in the culture medium are as follows:
(1) and (3) test tube slant culture: selecting 3-4 rings from a glycerol bacteria-protecting tube by using an inoculating ring, streaking and inoculating the ring in a slant culture medium with ampicillin resistance, culturing for 10-14h in an incubator at 37 ℃, and transferring for 1 generation;
(2) slant culture in eggplant-shaped bottles: selecting all thalli from a test tube slant culture medium by using an inoculating loop, streaking and inoculating the thalli into a eggplant-shaped bottle slant culture medium with ampicillin resistance, culturing for 10-14h in an incubator at 37 ℃, and transferring for 2 generations;
(3) inoculating all the bacteria in the eggplant-shaped bottle to a fermentation culture medium with ampicillin resistance, controlling the initial ventilation amount to be 2L/min, controlling the dissolved oxygen to be 20-40% (the dissolved oxygen of 0 percent is defined as the dissolved oxygen in a saturated sodium sulfite solution added with a small amount of copper sulfate, and the dissolved oxygen of 100 percent is defined as the dissolved oxygen in static air), controlling the pH to be 7.0 by automatically feeding ammonia water, and controlling the culture temperature to be 37 ℃;
(4) cultured to OD 600 When the concentration is 12-14, adding IPTG (isopropyl-beta-D-thiogalactoside) with the final concentration of 0.1-0.3mM to induce and express the target protein, adjusting the induction temperature to 25-30 ℃, and carrying out induction culture for 6-8h to collect thalli;
(5) centrifuging at 8000r/min and 4 deg.C for 15min to collect thallus, taking physiological saline or PBS buffer solution, shaking, resuspending and cleaning thallus for 2 times, and centrifuging and storing in-80 deg.C refrigerator for use.
Moreover, the slant culture medium is: 5g/L glucose, 10g/L peptone, 5g/L yeast extract, 10g/L beef extract, 5g/L NaCl, 25g/L agar, pH 7.0-7.2, sterilizing at 121 deg.C for 20min;
the fermentation medium is as follows: 20g/L glucose, 5g/L yeast extract, 30g/L corn steep liquor, 5g/L NaCl, KH 2 PO 4 1 g/L,MgSO 4 0.5 g/L,V H 1mg/L, pH 6.5-7.2, wherein glucose is sterilized at 115 deg.C for 15min, and other components are sterilized at 121 deg.C for 20min.
Moreover, the ratio g of the cell wet weight usage of the three Escherichia coli CKI-CCT, escherichia coli PPK-UDK and Escherichia coli CMK-NDK to the balance buffer solution in the step FI: mL are in order 12: 50. 10:50 and 8:50;
alternatively, the equilibration buffer is 50mM Na 2 HPO 4 And/or 300mM NaCl, adjusted to pH8.0 with NaOH;
or the cell disruption method comprises ultrasonic disruption, freeze-thaw disruption, liquid nitrogen grinding disruption or high-pressure homogenate disruption,
the crushing conditions of the high-pressure homogenate crushing are as follows: at 4 ℃ and 800-1000bar.
Use of an enzyme preparation as described above for the preparation of citicoline.
The method for preparing the citicoline by using the enzyme preparation as the catalyst comprises the steps of mixing the enzyme preparation with choline chloride, magnesium chloride, sodium hexametaphosphate, ATP, cytidine and Tris-HCL buffer solution by using the enzyme preparation as the catalyst and using the choline chloride, the cytidine, the sodium hexametaphosphate and the ATP as substrates, carrying out enzyme catalytic reaction, controlling the temperature at 30 ℃ and the stirring speed at 300r/min, and synthesizing the citicoline by adding NaOH or HCL to maintain the pH value at 8.0 in the reaction process.
The concentration of choline chloride, magnesium chloride, sodium hexametaphosphate, cytidine, ATP, tris-HCL buffer, and sodium hexametaphosphate in the reaction system were 30mM, 60mM, 5mM, 8.0 mM, and 100mM, respectively.
Moreover, the detection method of citicoline in the obtained reaction solution comprises the following steps: inactivating the reaction solution in boiling water bath, centrifuging at 13000r/min for 2min, and collectingDiluting the supernatant to 1g/L with deionized water, and filtering with 0.22 μm sterile membrane to obtain liquid phase bottle for analysis; determining content of citicoline by high performance liquid chromatography, wherein the sample volume is 20 μ L, the chromatographic column is Sepax HP-SAX (4.6 × 250 mM), and the mobile phase is 50mM KH 2 PO 4 ,H 3 PO 4 Adjusting pH to 3.5, column temperature to 30 deg.C, flow rate to 1mL/min, detection wavelength to 254nm, and citicoline retention time to 6.5min.
The invention has the advantages and positive effects that:
1. the invention reports that the phosphorylcholine cytidine transferase from Fusobacterium nucleatum (ATCC 25586) can be used for synthesizing the citicoline for the first time. Compared with the phosphocholine cytidine transferase generally used in the existing reports and derived from saccharomyces cerevisiae, the heterologous soluble expression quantity and the enzyme activity of the phosphocholine cytidine transferase derived from fusobacterium nucleatum are higher.
2. The invention realizes the process of preparing the citicoline by taking the cytidine and the choline chloride as main raw materials by using a multi-enzyme catalytic system for the first time. Compared with CMP and phosphorylcholine commonly used in the existing reports, the raw material cost is lower and the raw material is easy to obtain.
3. The invention solves the problems of low conversion rate and reaction rate of multi-enzyme catalysis, uses pET-Duet plasmid to carry out tandem expression on the enzyme for reaction, and optimizes the combination ratio, thereby simplifying the number of enzyme-producing strains. Under the optimal reaction conditions, the molar conversion rate of the citicoline to the cytidine reaches 91.5%, and the reaction rate reaches 4.58mmol -1 ﹒h -1
4. The enzyme preparation of the invention is used for synthesizing citicoline through multi-enzyme catalytic reaction, the reaction lasts for 6 hours, the molar yield of the citicoline is 27.4mM, and the molar conversion rate of substrate cytidine is 91.5%. Compared with the traditional production method, the method has the advantages of low raw material cost, mild reaction conditions, simplicity in operation, high conversion rate, high reaction speed and the like.
Drawings
FIG. 1 is a schematic representation of an enzyme-catalyzed reaction of the present invention;
FIG. 2 is a liquid chromatogram of citicoline in the multi-enzyme catalytic reaction solution of the present invention;
FIG. 3 is a liquid chromatogram of citicoline standard according to the present invention;
FIG. 4 is the electrophoresis chart of phosphocholine cytidyltransferase protein from Saccharomyces cerevisiae and Fusobacterium nucleatum of the present invention.
Detailed Description
The present invention is further illustrated by the following examples, which are intended to be illustrative, not limiting and are not intended to limit the scope of the invention.
The raw materials used in the invention are all conventional commercial products unless otherwise specified, the methods used in the invention are all conventional methods in the field if not specified, and the quality of each substance used in the invention is conventional quality.
An enzyme preparation for preparing citicoline is prepared through the following steps:
firstly, constructing an engineering bacterium Escherichia coli CKI-CCT to express choline kinase and phosphorylcholine cytidine transferase derived from fusobacterium nucleatum, wherein the choline kinase can catalyze choline chloride to form phosphorylcholine, and the phosphorylcholine cytidine transferase can catalyze the phosphorylcholine and CTP to form citicoline; engineering bacteria Escherichia coli PPK-UDK are constructed to express polyphosphate kinase derived from rhodobacter sphaeroides and cytidine kinase derived from thermus thermophilus, the polyphosphate kinase can be used for catalyzing ATP regeneration, and the cytidine kinase can be used for catalyzing cytidine to form CMP; constructing engineering bacteria Escherichia coli CMK-NDK to express cytidine kinase and nucleoside diphosphate kinase derived from Escherichia coli, wherein the cytidine kinase can be used for catalyzing CMP to form CDP, and the nucleoside diphosphate kinase can be used for catalyzing CDP to form CTP;
secondly, crushing the zymogenic cells obtained by fermentation, centrifuging at 13000rpm for 2min, and collecting supernatant to obtain crude enzyme liquid, namely the enzyme preparation for preparing the citicoline.
Preferably, the preparation method comprises the following steps:
the method comprises the steps of expressing heterologous choline kinase and phosphorylcholine cytidine transferase coding genes in Escherichia coli E.coli BL21 (ACCC 11171) to construct a bacterial strain Escherichia coli CKI-CCT with choline kinase activity and phosphorylcholine cytidine transferase activity;
expressing heterologous polyphosphate kinase and cytidine kinase coding genes in Escherichia coli BL21 (ACCC 11171) to construct a strain Escherichia coli PPK-UDK with polyphosphate kinase and cytidine kinase activities;
thirdly, endogenous cytidylic acid kinase and diphosphokinase encoding genes are expressed in Escherichia coli E.coli BL21 (ACCC 11171), and a strain Escherichia coli CMK-NDK with cytidylic acid kinase and diphosphokinase activities is constructed;
fourth, the constructed recombinant strains Escherichia coli CKI-CCT, escherichia coli PPK-UDK and Escherichia coli CMK-NDK are respectively cultured in a culture medium, choline kinase, phosphorylcholine cytidyltransferase, polyphosphate kinase, cytidine kinase, diphosphate kinase and cytidylate kinase with high enzyme activity are induced to generate, and enzyme-producing cells are collected in a centrifugal mode;
fifthly, the enzyme-producing cells Escherichia coli CKI-CCT, escherichia coli PPK-UDK and Escherichia coli CMK-NDK obtained through culture in the fourth step are resuspended in a balance buffer solution and subjected to cell disruption, and the disrupted solution is centrifuged at 13000r/min for 20min to obtain supernatant, namely the crude enzyme solution.
Preferably, in the step, pET-Duet plasmids are used as vectors to over-express choline kinase and phosphorylcholine cytidine transferase genes in E.coli BL21, and a strain E.coli CKI-CCT with choline kinase activity and phosphorylcholine cytidine transferase activity is constructed; wherein the choline kinase coding gene is derived from Fusobacterium nucleatum (ATCC 25586), and amplification primers of the choline kinase coding gene are SEQ ID NO.1 and SEQ ID NO.2; the coding gene of the phosphorylcholine cytidylyltransferase is derived from Fusobacterium nucleatum (ATCC 25586), and the amplification primers are SEQ ID NO.3 and SEQ ID NO.4; the nucleotide sequence of the plasmid pET-Duet is SEQ ID NO.13;
in the second step, pET-Duet plasmids are used as vectors to over-express polyphosphate kinase and cytidine kinase genes in E.coli BL21, and a strain E.coli PPK-UDK with the activity of the polyphosphate kinase and the cytidine kinase is constructed; wherein the polyphosphate kinase coding gene is derived from rhodobacter sphaeroides (CGMCC 1.5028), and amplification primers of the polyphosphate kinase coding gene are SEQ ID NO.5 and SEQ ID NO.6; the cytidine kinase coding gene is derived from Thermus thermophilus (ATCC 27634), and amplification primers of the cytidine kinase coding gene are SEQ ID NO.7 and SEQ ID NO.8; the nucleotide sequence of the plasmid pET-Duet is SEQ ID NO.13;
in the step three, overexpression of cytidylic acid kinase and diphosphokinase genes in E.coli BL21 is carried out by taking pET-Duet plasmid as a vector, and a strain E.coli CMK-NDK with cytidylic acid kinase activity and diphosphokinase activity is constructed; wherein the cytidylic acid kinase coding gene is derived from Escherichia coli K12 (ATCC 10798), and amplification primers of the cytidylic acid kinase coding gene are SEQ ID NO.9 and SEQ ID NO.10; the diphosphate kinase coding gene is derived from Escherichia coli K12 (ATCC 10798), and amplification primers of the diphosphate kinase coding gene are SEQ ID NO.11 and SEQ ID NO.12; the nucleotide sequence of the plasmid pET-Duet is SEQ ID NO.13.
Preferably, the specific steps of culturing the recombinant strain in the culture medium in the step four are as follows:
(1) slant culture in test tubes: selecting 3-4 rings from a glycerol-protected bacterium tube by using an inoculating ring, streaking and inoculating the ring in a slant culture medium with ampicillin resistance, culturing for 10-14h in an incubator at 37 ℃, and transferring for 1 generation;
(2) slant culture in eggplant-shaped bottles: selecting all thalli from a test tube slant culture medium by using an inoculating loop, streaking and inoculating the thalli into a eggplant-shaped bottle slant culture medium with ampicillin resistance, culturing for 10-14h in an incubator at 37 ℃, and transferring for 2 generations;
(3) inoculating all the bacteria in the eggplant-shaped bottle to a fermentation culture medium with ampicillin resistance, controlling the initial ventilation amount to be 2L/min, controlling the dissolved oxygen to be 20-40% (the dissolved oxygen of 0 percent is defined as the dissolved oxygen in a saturated sodium sulfite solution added with a small amount of copper sulfate, and the dissolved oxygen of 100 percent is defined as the dissolved oxygen in static air), controlling the pH to be 7.0 by automatically feeding ammonia water, and controlling the culture temperature to be 37 ℃;
(4) cultured to OD 600 If the concentration is not less than 12-14, IPTG (isopropyl-beta-D-thiogalactoside) with the final concentration of 0.1-0.3mM is added to induce and express the target protein, and induction is regulatedInducing culture at 25-30 deg.C for 6-8h, and collecting thallus;
(5) centrifuging at 8000r/min and 4 deg.C for 15min to collect thallus, taking physiological saline or PBS buffer solution, shaking, resuspending and cleaning thallus for 2 times, and centrifuging and storing in-80 deg.C refrigerator for use.
Preferably, the slant culture medium is: 5g/L glucose, 10g/L peptone, 5g/L yeast extract, 10g/L beef extract, 5g/L NaCl, 25g/L agar, pH 7.0-7.2, sterilizing at 121 deg.C for 20min;
the fermentation medium is as follows: 20g/L glucose, 5g/L yeast extract, 30g/L corn steep liquor, 5g/L NaCl, KH 2 PO 4 1 g/L,MgSO 4 0.5 g/L,V H 1mg/L, pH 6.5-7.2, wherein glucose is sterilized at 115 deg.C for 15min, and other components are sterilized at 121 deg.C for 20min.
Preferably, the ratio g of the cell wet weight usage of the three Escherichia coli CKI-CCT, escherichia coli PPK-UDK and Escherichia coli CMK-NDK to the balance buffer solution in the step FI: mL is 12: 50. 10:50 and 8:50;
alternatively, the equilibration buffer is 50mM Na 2 HPO 4 And/or 300mM NaCl, pH adjusted to 8.0 with NaOH;
or the cell disruption method comprises ultrasonic disruption, freeze-thaw disruption, liquid nitrogen grinding disruption or high-pressure homogenate disruption,
the crushing conditions of the high-pressure homogenate crushing are as follows: at 4 ℃ and 800-1000bar.
Use of an enzyme preparation as described above for the preparation of citicoline.
The method for preparing the citicoline by using the enzyme preparation as the catalyst comprises the steps of mixing the enzyme preparation with choline chloride, cytidine, sodium hexametaphosphate and ATP as substrates, carrying out enzyme catalytic reaction, controlling the temperature at 30 ℃ and the stirring speed at 300r/min, and synthesizing the citicoline by feeding NaOH or HCL to maintain the pH value at 8.0 in the reaction process.
Preferably, the reaction system has a choline chloride concentration of 30mM, a magnesium chloride concentration of 60mM, a sodium hexametaphosphate concentration of 60mM, a cytidine concentration of 30mM, an ATP concentration of 5mM, a Tris-HCL buffer pH =8.0, and a concentration of 100mM.
Preferably, the detection method of citicoline in the obtained reaction solution comprises the following steps: inactivating reaction liquid in boiling water bath, centrifuging at 13000r/min for 2min, taking supernatant, diluting to 1g/L with deionized water, filtering with sterile membrane of 0.22 μm to liquid phase bottle for analysis; determining content of citicoline by high performance liquid chromatography, wherein the sample volume is 20 μ L, the chromatographic column is Sepax HP-SAX (4.6 × 250 mM), and the mobile phase is 50mM KH 2 PO 4 ,H 3 PO 4 Adjusting pH to 3.5, column temperature to 30 deg.C, flow rate to 1mL/min, detection wavelength to 254nm, and citicoline retention time to 6.5min.
As shown in fig. 1.
Specifically, the preparation and detection are as follows:
1. construction of Choline kinase and Phosphorylcholine Cytidine transferase Strain E
(1) A genome of Fusobacterium nucleatum (ATCC 25586) is used as a template, a pair of primers are designed according to a choline kinase gene licA sequence, and an licA gene fragment is obtained through amplification. The pair of primers contains cleavage sites EcoR I and Hind III, respectively (see appendix <1 >).
(2) The objective fragment and pET-Duet vector plasmid (see appendix < 7) obtained in step (1) were digested simultaneously with the Takara restriction enzymes EcoR I and Hind III to obtain the objective gene with the same cohesive ends and pET-Duet linear fragment.
(3) And (3) respectively connecting the gene fragments obtained in the step (2) by using Takara T4DNA ligase to obtain a recombinant expression vector pET-Duet-licA.
(4) A gene amplification primer pair is designed by taking a Fusobacterium nucleatum (ATCC 25586) genome as a template according to a coding gene licC sequence of phosphorylcholine cytidyltransferase, and a target gene segment is obtained by amplification. The pair of primers contains the cleavage sites EcoRV and Xho I, respectively (see appendix <2 >).
(5) The recombinant expression vector pET-Duet-licA obtained in step (3) was double-digested with Takara restriction enzymes EcoR V and Xho I to obtain the target gene with the same cohesive ends and pET-Duet-licA linear fragment.
(6) The gene fragment obtained in step (4) was ligated using Takara T4DNA ligase to obtain a recombinant expression vector pET-Duet licA-licC.
(7) And (3) transforming the recombinant expression vector in the step (6) into E.coli BL21 (ACCC 11171) to obtain the strain E.coli CKI-CCT with choline kinase activity and phosphorylcholine cytidyltransferase activity.
2. Construction of polyphosphate kinase and cytidine kinase strain E
(1) A Rhodobacter sphaeroides (CGMCC 1.5028) genome is used as a template, a pair of gene amplification primers are designed according to a polyphosphate kinase coding gene ppk sequence, and a target gene fragment is obtained through amplification. The primers contain the restriction sites EcoR I and Hind III, respectively (see appendix < 3 >).
(2) The plasmid pET-Duet vector, which is the target fragment obtained in step (1), is digested simultaneously with restriction enzymes EcoR I and Hind III of Takara (see appendix < 7 >), to obtain the target gene with the same cohesive ends and linear pET-Duet fragments.
(3) And (3) connecting the gene fragments obtained in the step (2) by using Takara T4DNA ligase to obtain a recombinant expression vector pET-Duet-ppk.
(4) A genome of Thermus thermophilus (Thermus thermophilus, ATCC 27634) is used as a template, a pair of gene amplification primers are designed according to a sequence of a cytidine kinase coding gene udk, and a target gene fragment is obtained through amplification. The primers of the pair contain the restriction sites EcoRV and Xho I, respectively (see appendix < 4 >).
(5) The recombinant expression vector pET-Duet-ppk obtained in step (3) was double-digested with Takara restriction enzymes EcoR V and Xho I to obtain the target gene with the same cohesive ends and a linear fragment pET-Duet-ppk.
(6) The gene fragment obtained in step (4) was ligated using Takara T4DNA ligase to obtain a recombinant expression vector pET-Duet ppk-udk.
(7) And (3) transforming the recombinant expression vector in the step (6) into E.coli BL21 (ACCC 11171) to obtain a strain E.coli PPK-UDK with polyphosphate kinase activity and cytidine kinase activity.
3. Construction of Cytidylic acid kinase and diphosphokinase Strain E
(1) A gene amplification primer pair is designed by taking an Escherichia coli K12 (ATCC 10798) genome as a template according to a cytidylic acid kinase coding gene cmk sequence, and a target gene fragment is obtained by amplification. The pair of primers contains the cleavage sites EcoR I and Hind III, respectively (see appendix < 5 >).
(2) The plasmid pET-Duet vector, which is the target fragment obtained in step (1), is digested simultaneously with restriction enzymes EcoR I and Hind III of Takara (see appendix < 7 >), to obtain the target gene with the same cohesive ends and linear pET-Duet fragments.
(3) And (3) connecting the gene fragments obtained in the step (2) by using Takara T4DNA ligase to obtain a recombinant expression vector pET-Duet-cmk.
(4) A gene group of Escherichia coli (Escherichia coli K12, ATCC 10798) is used as a template, a pair of gene amplification primers are designed according to a gene ndk sequence encoding diphosphokinase, and a target gene fragment is obtained through amplification. The primers contain the restriction sites EcoRV and Xho I, respectively (see appendix < 6 >).
(5) The recombinant expression vector pET-Duet-cmk obtained in step (3) was double-digested with Takara restriction enzymes EcoR V and Xho I to obtain a target gene with the same cohesive ends and a linear fragment pET-Duet-cmk.
(6) The gene fragment obtained in step (4) was ligated using Takara T4DNA ligase to obtain a recombinant expression vector pET-Duet cmk-ndk.
(7) And (3) transforming the recombinant expression vector in the step (6) into E.coli BL21 (ACCC 11171) to obtain the strain E.coli CMK-NDK with the activity of the cytidylic acid kinase and the activity of the diphosphokinase.
4. Production of enzyme by fermentation of E.coli CKI-CCT, E.coli PPK-UDK and E.coli CMK-NDK strains and preparation of crude enzyme solution
(1) And (3) selecting 3-4 loops of the recombinant strains in the first, second and third steps from a glycerol bacteria-protecting tube by using an inoculating loop, streaking and inoculating the recombinant strains in a slant culture medium with corresponding plasmid resistance, culturing the strains in an incubator at 37 ℃ for 12 hours, and transferring the strains for 1 generation.
(2) All thalli are selected from a test tube slant culture medium by using an inoculating loop and are inoculated into an eggplant-shaped bottle slant culture medium with corresponding plasmid resistance by streaking, and the eggplant-shaped bottle slant culture medium is cultured for 12 hours in an incubator at 37 ℃ and is transferred for 2 generations.
(3) The entire strain in the eggplant-shaped flask was inoculated into a 5L fermenter containing 3L of a fermentation medium with the corresponding plasmid resistance. The initial aeration rate is 2L/min, the dissolved oxygen is controlled at 20% -40% (dissolved oxygen 0% is defined as the dissolved oxygen in saturated sodium sulfite solution with small amount of copper sulfate added, dissolved oxygen 100% is defined as the dissolved oxygen in still air), the pH is controlled at 7.0 by automatic feeding of ammonia water, and the culture temperature is 37 ℃.
(4) Cultured to OD 600 And (5) when the concentration is not more than 13, adding IPTG (isopropyl-beta-D-thiogalactoside) with the final concentration of 0.2mM to induce and express the target protein, regulating the induction temperature to be 30 ℃, and performing induction culture for 8 hours to collect the thalli.
(5) Centrifuging at 8000r/min and 4 deg.C for 15min, collecting thallus, taking appropriate amount of physiological saline or PBS buffer solution, shaking, resuspending, cleaning thallus for 2 times, centrifuging, and storing in-80 deg.C refrigerator for use.
(6) 12g of Escherichia coli CKI-CCT wet cells, 10g of Escherichia coli PPK-UDK wet cells and 8g of Escherichia coli CMK-NDK wet cells were taken out from a-80 ℃ refrigerator and resuspended in 50mL of a balance buffer (50 mM Na) respectively 2 HPO 4 300mM NaCl, pH8.0 with NaOH). After the heavy suspension is uniform, high-pressure homogenization is carried out to break cells, and the breaking conditions are as follows: centrifuging the crushed solution at 13000r/min for 20min at 4 ℃ under 1000bar, and taking supernatant, namely the crude enzyme solution.
5. Multi-enzyme catalytic synthesis of citicoline
(1) A reaction system was prepared such that the choline chloride concentration was 30mM, the magnesium sulfate concentration was 60mM, the sodium hexametaphosphate concentration was 60mM, the cytidine concentration was 30mM, the ATP concentration was 5mM, and the Tris-HCl buffer solution (pH 8.0) concentration was 100mM. Carrying out enzyme catalysis reaction in a 5L fermentation tank, controlling the temperature at 30 ℃ and the stirring speed at 300r/min. The pH value can be maintained at 8.0 by adding NaOH or HCL during the reaction.
6. Detection of citicoline in reaction solution
Inactivating reaction liquid with a proper volume in a boiling water bath, centrifuging at 13000r/min for 2min, taking supernate, diluting to 1g/L by deionized water, and filtering by using a sterile membrane of 0.22 mu m until a liquid bottle is ready for analysis. Determining cytidylic acid content by high performance liquid chromatography, wherein the sample volume is 20 μ L, the chromatographic column is Sepax HP-SAX (4.6 × 250 mM) chromatographic column, and the mobile phase is 50mM KH 2 PO 4 (H 3 PO 4 Adjusting pH to 3.5), the column temperature is 30 ℃, the flow rate is 1mL/min, and the detection wavelength is 254nm. The reaction conditions are shown in figure 2, figure 3 and table 1 by high performance liquid chromatography detection.
TABLE 1 results of the enzyme-catalyzed reaction
Figure BDA0002740367160000111
Figure BDA0002740367160000121
7. Comparison of Phosphorylcholine Cytidine transferase Activity from different sources
The primer (5 'was designed based on the gene sequence of phosphocholine cytidyltransferase derived from Saccharomyces cerevisiae S288c commonly used in the prior art'
ATGGGTCGCGGATCCGAATTCATGGCCAATCGACAACCG 3 'and 5'
CTCGAGTGCGGCCGCAAGCTTTTAGTTGGCGCTCTGCTTCTTC 3 '), a target gene is amplified from a Saccharomyces cerevisiae S288c genome, and the target gene is connected to pET-28a plasmid through enzyme digestion of 5' end EcoRI and 3' end Hind III to obtain a recombinant plasmid pET-28a-cct sc . Transforming the recombinant plasmid into E.coli BL21 competent cells to obtain a recombinant strain E.coli BL21 pET-28a-cct sc
A primer (5 ') was designed based on the gene sequence of phosphocholine cytidylyltransferase derived from Fusobacterium nucleatum ATCC25586 used in the present invention'
ATGGGTCGCGGATCCGAATTCGAATTCATGAACGTAACGCGA 3 'and 5'
CTCGAGTGCGGCCGCAAGCTTAAGCTTTTAGCTGCTGTGCAGTT 3 '), amplifying a target gene from a genome of Fusobacterium Nuclear ATCC25586, and connecting the target gene to a pET-28a plasmid through enzyme digestion of 5' end EcoRI and 3' end HindIII to obtain a recombinant plasmid pET-28a-licC fn . Transforming the recombinant plasmid into E.coli BL21 competent cells to obtain a recombinant strain E.coli BL21 pET-28a-licC fn
The recombinant strains constructed above were cultured, after IPTG induction for enzyme production, the cells were collected, the cells were disrupted to extract a crude enzyme solution, and the expression of the enzyme was determined by SDS-polyacrylamide gel electrophoresis, as shown in FIG. 4. Adding substrate to perform enzyme-catalyzed reaction to test the activity of phosphorylcholine cytidine transferase. The enzyme activity was measured under CTP 10mM, phosphorylcholine 10mM, ATP 10mM, magnesium sulfate 30mM, tris-HCl buffer (pH 8.0) 50mM, and crude enzyme solution (protein concentration) 50mg/L. The catalytic formation of 1. Mu.M citicoline per minute at 30 ℃ is defined as 1 unit of enzyme activity. The measurement results are shown in table 1.
TABLE 2 comparison of enzyme activities without the source of phosphorylcholine cytidylyltransferase
Figure BDA0002740367160000122
The experimental results show that the soluble expression of the phosphocholine cytidine transferase derived from Fusobacterium nucleatum ATCC25586 is better. The specific enzyme activity of the enzyme is 3.12 times of that of phosphorylcholine cytidine transferase from Saccharomyces cerevisiae S288 c.
Although the embodiments of the present invention have been disclosed for illustrative purposes, those skilled in the art will appreciate that: various substitutions, changes and modifications are possible without departing from the spirit and scope of the invention and the appended claims, and therefore the scope of the invention is not limited to the embodiments disclosed.
Appendix
(1) Choline kinase coding gene enzyme cutting site of fusobacterium nucleatum and amplification primer
5'CC GAATTC ATGAATGCAATAATAAT 3'EcoRI
5'GTG AAGCTT TTACTCCATATCTGTAAGAT 3'HindIII
Phosphocholine cytidine transferase coding gene restriction enzyme site of <2 > Fusobacterium nucleatum and amplification primer
5'CC GATATC ATGAATGCCATCATCAT 3'EcoR Ⅴ
5'GTG CTCGAG TTAGCTGCTGTGCAGTTCGA 3'Xho I
Polyphosphate kinase coding gene enzyme cutting site of < 3> rhodobacter sphaeroides and amplification primer
5'CC GAATTCATGGCCGAAGATCGTGCTAT 3'EcoR I
5'CGC AAGCTT TCAACCTTGACGCGGTTTAC 3'HindIII
Cytidine kinase coding gene enzyme cutting site of < 4 > Thermus thermophilus and amplification primer
5'CC GATATC GTGAGCGCCCCGAAACC 3'EcoR Ⅴ
5'GTG CTCGAG TTAGGCTGCGCCCATACGTG 3'Xho I
Enzyme cutting site and amplification primer of cytidine kinase coding gene of escherichia coli
5'CC GAATTC ATGACGGCAATTGCCCC 3'EcoR I
5'CGC AAGCTT TTATGCGAGAGCCAATTTCT 3'HindIII
Enzyme cutting site of diphosphate kinase coding gene of < 6 > escherichia coli and amplification primer
5'CC GATATC ATGGCTATTGAACGTAC 3'EcoR Ⅴ
5'GTG CTCGAG TTAACGGGTGCGCGGGCACA 3'Xho I
Plasmid pET-Duet of < 7 >
GGGGAATTGTGAGCGGATAACAATTCCCCTCTAGAAATAATTTTGTTTAACTTTAAGAAGGAGATATACCATGGGCAGCAGCCATCACCATCATCACCACAGCCAGGATCCGAATTCGAGCTCGGCGCGCCTGCAGGTCGACAAGCTTGCGGCCGCATAATGCTTAAGTCGAACAGAAAGTAATCGTATTGTACACGGCCGCATAATCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAATTCCCCATCTTAGTATATTAGTTAAGTATAAGAAGGAGATATACATATGGCAGATCTCAATTGGATATCGGCCGGCCACGCGATCGCTGACGTCGGTACCCTCGAGTCTGGTAAAGAAACCGCTGCTGCGAAATTTGAACGCCAGCACATGGACTCGTCTACTAGCGCAGCTTAATTAACCTAGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGATTGGCGAATGGGACGCGCCCTGTAGCGGCGCATTAAGCGCGGCGGGTGTGGTGGTTACGCGCAGCGTGACCGCTACACTTGCCAGCGCCCTAGCGCCCGCTCCTTTCGCTTTCTTCCCTTCCTTTCTCGCCACGTTCGCCGGCTTTCCCCGTCAAGCTCTAAATCGGGGGCTCCCTTTAGGGTTCCGATTTAGTGCTTTACGGCACCTCGACCCCAAAAAACTTGATTAGGGTGATGGTTCACGTAGTGGGCCATCGCCCTGATAGACGGTTTTTCGCCCTTTGACGTTGGAGTCCACGTTCTTTAATAGTGGACTCTTGTTCCAAACTGGAACAACACTCAACCCTATCTCGGTCTATTCTTTTGATTTATAAGGGATTTTGCCGATTTCGGCCTATTGGTTAAAAAATGAGCTGATTTAACAAAAATTTAACGCGAATTTTAACAAAATATTAACGTTTACAATTTCTGGCGGCACGATGGCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTAAATTAAAAATGAAGTTTTAAATCAATCTAAAGTATATATGAGTAAACTTGGTCTGACAGTTACCAATGCTTAATCAGTGAGGCACCTATCTCAGCGATCTGTCTATTTCGTTCATCCATAGTTGCCTGACTCCCCGTCGTGTAGATAACTACGATACGGGAGGGCTTACCATCTGGCCCCAGTGCTGCAATGATACCGCGAGACCCACGCTCACCGGCTCCAGATTTATCAGCAATAAACCAGCCAGCCGGAAGGGCCGAGCGCAGAAGTGGTCCTGCAACTTTATCCGCCTCCATCCAGTCTATTAATTGTTGCCGGGAAGCTAGAGTAAGTAGTTCGCCAGTTAATAGTTTGCGCAACGTTGTTGCCATTGCTACAGGCATCGTGGTGTCACGCTCGTCGTTTGGTATGGCTTCATTCAGCTCCGGTTCCCAACGATCAAGGCGAGTTACATGATCCCCCATGTTGTGCAAAAAAGCGGTTAGCTCCTTCGGTCCTCCGATCGTTGTCAGAAGTAAGTTGGCCGCAGTGTTATCACTCATGGTTATGGCAGCACTGCATAATTCTCTTACTGTCATGCCATCCGTAAGATGCTTTTCTGTGACTGGTGAGTACTCAACCAAGTCATTCTGAGAATAGTGTATGCGGCGACCGAGTTGCTCTTGCCCGGCGTCAATACGGGATAATACCGCGCCACATAGCAGAACTTTAAAAGTGCTCATCATTGGAAAACGTTCTTCGGGGCGAAAACTCTCAAGGATCTTACCGCTGTTGAGATCCAGTTCGATGTAACCCACTCGTGCACCCAACTGATCTTCAGCATCTTTTACTTTCACCAGCGTTTCTGGGTGAGCAAAAACAGGAAGGCAAAATGCCGCAAAAAAGGGAATAAGGGCGACACGGAAATGTTGAATACTCATACTCTTCCTTTTTCAATCATGATTGAAGCATTTATCAGGGTTATTGTCTCATGAGCGGATACATATTTGAATGTATTTAGAAAAATAAACAAATAGGTCATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAGATCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTGTCCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATACCGCTCGCCGCAGCCGAACGACCGAGCGCAGCGAGTCAGTGAGCGAGGAAGCGGAAGAGCGCCTGATGCGGTATTTTCTCCTTACGCATCTGTGCGGTATTTCACACCGCATATATGGTGCACTCTCAGTACAATCTGCTCTGATGCCGCATAGTTAAGCCAGTATACACTCCGCTATCGCTACGTGACTGGGTCATGGCTGCGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTCCCGGCATCCGCTTACAGACAAGCTGTGACCGTCTCCGGGAGCTGCATGTGTCAGAGGTTTTCACCGTCATCACCGAAACGCGCGAGGCAGCTGCGGTAAAGCTCATCAGCGTGGTCGTGAAGCGATTCACAGATGTCTGCCTGTTCATCCGCGTCCAGCTCGTTGAGTTTCTCCAGAAGCGTTAATGTCTGGCTTCTGATAAAGCGGGCCATGTTAAGGGCGGTTTTTTCCTGTTTGGTCACTGATGCCTCCGTGTAAGGGGGATTTCTGTTCATGGGGGTAATGATACCGATGAAACGAGAGAGGATGCTCACGATACGGGTTACTGATGATGAACATGCCCGGTTACTGGAACGTTGTGAGGGTAAACAACTGGCGGTATGGATGCGGCGGGACCAGAGAAAAATCACTCAGGGTCAATGCCAGCGCTTCGTTAATACAGATGTAGGTGTTCCACAGGGTAGCCAGCAGCATCCTGCGATGCAGATCCGGAACATAATGGTGCAGGGCGCTGACTTCCGCGTTTCCAGACTTTACGAAACACGGAAACCGAAGACCATTCATGTTGTTGCTCAGGTCGCAGACGTTTTGCAGCAGCAGTCGCTTCACGTTCGCTCGCGTATCGGTGATTCATTCTGCTAACCAGTAAGGCAACCCCGCCAGCCTAGCCGGGTCCTCAACGACAGGAGCACGATCATGCTAGTCATGCCCCGCGCCCACCGGAAGGAGCTGACTGGGTTGAAGGCTCTCAAGGGCATCGGTCGAGATCCCGGTGCCTAATGAGTGAGCTAACTTACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTGCGTATTGGGCGCCAGGGTGGTTTTTCTTTTCACCAGTGAGACGGGCAACAGCTGATTGCCCTTCACCGCCTGGCCCTGAGAGAGTTGCAGCAAGCGGTCCACGCTGGTTTGCCCCAGCAGGCGAAAATCCTGTTTGATGGTGGTTAACGGCGGGATATAACATGAGCTGTCTTCGGTATCGTCGTATCCCACTACCGAGATGTCCGCACCAACGCGCAGCCCGGACTCGGTAATGGCGCGCATTGCGCCCAGCGCCATCTGATCGTTGGCAACCAGCATCGCAGTGGGAACGATGCCCTCATTCAGCATTTGCATGGTTTGTTGAAAACCGGACATGGCACTCCAGTCGCCTTCCCGTTCCGCTATCGGCTGAATTTGATTGCGAGTGAGATATTTATGCCAGCCAGCCAGACGCAGACGCGCCGAGACAGAACTTAATGGGCCCGCTAACAGCGCGATTTGCTGGTGACCCAATGCGACCAGATGCTCCACGCCCAGTCGCGTACCGTCTTCATGGGAGAAAATAATACTGTTGATGGGTGTCTGGTCAGAGACATCAAGAAATAACGCCGGAACATTAGTGCAGGCAGCTTCCACAGCAATGGCATCCTGGTCATCCAGCGGATAGTTAATGATCAGCCCACTGACGCGTTGCGCGAGAAGATTGTGCACCGCCGCTTTACAGGCTTCGACGCCGCTTCGTTCTACCATCGACACCACCACGCTGGCACCCAGTTGATCGGCGCGAGATTTAATCGCCGCGACAATTTGCGACGGCGCGTGCAGGGCCAGACTGGAGGTGGCAACGCCAATCAGCAACGACTGTTTGCCCGCCAGTTGTTGTGCCACGCGGTTGGGAATGTAATTCAGCTCCGCCATCGCCGCTTCCACTTTTTCCCGCGTTTTCGCAGAAACGTGGCTGGCCTGGTTCACCACGCGGGAAACGGTCTGATAAGAGACACCGGCATACTCTGCGACATCGTATAACGTTACTGGTTTCACATTCACCACCCTGAATTGACTCTCTTCCGGGCGCTATCATGCCATACCGCGAAAGGTTTTGCGCCATTCGATGGTGTCCGGGATCTCGACGCTCTCCCTTATGCGACTCCTGCATTAGGAAGCAGCCCAGTAGTAGGTTGAGGCCGTTGAGCACCGCCGCCGCAAGGAATGGTGCATGCAAGGAGATGGCGCCCAACAGTCCCCCGGCCACGGGGCCTGCCACCATACCCACGCCGAAACAAGCGCTCATGAGCCCGAAGTGGCGAGCCCGATCTTCCCCATCGGTGATGTCGGCGATATAGGCGCCAGCAACCGCACCTGTGGCGCCGGTGATGCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCGATCTCGATCCCGCGAAATTAATACGACTCACTATA。
Sequence listing
<110> Tianjin university of science and technology
<120> enzyme preparation for preparing citicoline and method for preparing citicoline by enzyme catalysis
<160> 13
<170> SIPOSequenceListing 1.0
<210> 1
<211> 25
<212> DNA
<213> Choline kinase coding gene restriction site of Fusobacterium nucleatum and amplification primer 1 (Unknown)
<400> 1
ccgaattcat gaatgcaata ataat 25
<210> 2
<211> 29
<212> DNA
<213> Choline kinase coding gene restriction site of Fusobacterium nucleatum and amplification primer 2 (Unknown)
<400> 2
gtgaagcttt tactccatat ctgtaagat 29
<210> 3
<211> 25
<212> DNA
<213> Choline Phosphorylcytidylyltransferase coding Gene restriction site of Fusobacterium nucleatum and amplification primer 1 (Unknown)
<400> 3
ccgatatcat gaatgccatc atcat 25
<210> 4
<211> 29
<212> DNA
<213> Choline Phosphorylcytidylyltransferase coding Gene restriction site of Fusobacterium nucleatum and amplification primer 2 (Unknown)
<400> 4
gtgctcgagt tagctgctgt gcagttcga 29
<210> 5
<211> 28
<212> DNA
<213> polyphosphoric acid kinase coding gene enzyme cutting site of rhodobacter sphaeroides and amplification primer 1 (Unknown)
<400> 5
ccgaattcat ggccgaagat cgtgctat 28
<210> 6
<211> 29
<212> DNA
<213> polyphosphoric acid kinase coding gene enzyme cutting site of rhodobacter sphaeroides and amplification primer 2 (Unknown)
<400> 6
cgcaagcttt caaccttgac gcggtttac 29
<210> 7
<211> 25
<212> DNA
<213> restriction site of Cytidine kinase-encoding gene of Thermus thermophilus and amplification primer 1 (Unknown)
<400> 7
ccgatatcgt gagcgccccg aaacc 25
<210> 8
<211> 29
<212> DNA
<213> restriction site of Cytidine kinase-encoding gene of Thermus thermophilus and amplification primer 2 (Unknown)
<400> 8
gtgctcgagt taggctgcgc ccatacgtg 29
<210> 9
<211> 25
<212> DNA
<213> restriction site of cytidylic acid kinase coding gene of Escherichia coli and amplification primer 1 (Unknown)
<400> 9
ccgaattcat gacggcaatt gcccc 25
<210> 10
<211> 29
<212> DNA
<213> restriction site of Cytoside kinase-encoding gene of E.coli and amplification primer 2 (Unknown)
<400> 10
cgcaagcttt tatgcgagag ccaatttct 29
<210> 11
<211> 25
<212> DNA
<213> digestion site of diphosphate kinase coding gene of E.coli and amplification primer 1 (Unknown)
<400> 11
ccgatatcat ggctattgaa cgtac 25
<210> 12
<211> 29
<212> DNA
<213> digestion site of diphosphate kinase coding gene of E.coli and amplification primer 2 (Unknown)
<400> 12
gtgctcgagt taacgggtgc gcgggcaca 29
<210> 13
<211> 5420
<212> DNA
<213> pET-Duet plasmid (Unknown)
<400> 13
ggggaattgt gagcggataa caattcccct ctagaaataa ttttgtttaa ctttaagaag 60
gagatatacc atgggcagca gccatcacca tcatcaccac agccaggatc cgaattcgag 120
ctcggcgcgc ctgcaggtcg acaagcttgc ggccgcataa tgcttaagtc gaacagaaag 180
taatcgtatt gtacacggcc gcataatcga aattaatacg actcactata ggggaattgt 240
gagcggataa caattcccca tcttagtata ttagttaagt ataagaagga gatatacata 300
tggcagatct caattggata tcggccggcc acgcgatcgc tgacgtcggt accctcgagt 360
ctggtaaaga aaccgctgct gcgaaatttg aacgccagca catggactcg tctactagcg 420
cagcttaatt aacctaggct gctgccaccg ctgagcaata actagcataa ccccttgggg 480
cctctaaacg ggtcttgagg ggttttttgc tgaaaggagg aactatatcc ggattggcga 540
atgggacgcg ccctgtagcg gcgcattaag cgcggcgggt gtggtggtta cgcgcagcgt 600
gaccgctaca cttgccagcg ccctagcgcc cgctcctttc gctttcttcc cttcctttct 660
cgccacgttc gccggctttc cccgtcaagc tctaaatcgg gggctccctt tagggttccg 720
atttagtgct ttacggcacc tcgaccccaa aaaacttgat tagggtgatg gttcacgtag 780
tgggccatcg ccctgataga cggtttttcg ccctttgacg ttggagtcca cgttctttaa 840
tagtggactc ttgttccaaa ctggaacaac actcaaccct atctcggtct attcttttga 900
tttataaggg attttgccga tttcggccta ttggttaaaa aatgagctga tttaacaaaa 960
atttaacgcg aattttaaca aaatattaac gtttacaatt tctggcggca cgatggcatg 1020
agattatcaa aaaggatctt cacctagatc cttttaaatt aaaaatgaag ttttaaatca 1080
atctaaagta tatatgagta aacttggtct gacagttacc aatgcttaat cagtgaggca 1140
cctatctcag cgatctgtct atttcgttca tccatagttg cctgactccc cgtcgtgtag 1200
ataactacga tacgggaggg cttaccatct ggccccagtg ctgcaatgat accgcgagac 1260
ccacgctcac cggctccaga tttatcagca ataaaccagc cagccggaag ggccgagcgc 1320
agaagtggtc ctgcaacttt atccgcctcc atccagtcta ttaattgttg ccgggaagct 1380
agagtaagta gttcgccagt taatagtttg cgcaacgttg ttgccattgc tacaggcatc 1440
gtggtgtcac gctcgtcgtt tggtatggct tcattcagct ccggttccca acgatcaagg 1500
cgagttacat gatcccccat gttgtgcaaa aaagcggtta gctccttcgg tcctccgatc 1560
gttgtcagaa gtaagttggc cgcagtgtta tcactcatgg ttatggcagc actgcataat 1620
tctcttactg tcatgccatc cgtaagatgc ttttctgtga ctggtgagta ctcaaccaag 1680
tcattctgag aatagtgtat gcggcgaccg agttgctctt gcccggcgtc aatacgggat 1740
aataccgcgc cacatagcag aactttaaaa gtgctcatca ttggaaaacg ttcttcgggg 1800
cgaaaactct caaggatctt accgctgttg agatccagtt cgatgtaacc cactcgtgca 1860
cccaactgat cttcagcatc ttttactttc accagcgttt ctgggtgagc aaaaacagga 1920
aggcaaaatg ccgcaaaaaa gggaataagg gcgacacgga aatgttgaat actcatactc 1980
ttcctttttc aatcatgatt gaagcattta tcagggttat tgtctcatga gcggatacat 2040
atttgaatgt atttagaaaa ataaacaaat aggtcatgac caaaatccct taacgtgagt 2100
tttcgttcca ctgagcgtca gaccccgtag aaaagatcaa aggatcttct tgagatcctt 2160
tttttctgcg cgtaatctgc tgcttgcaaa caaaaaaacc accgctacca gcggtggttt 2220
gtttgccgga tcaagagcta ccaactcttt ttccgaaggt aactggcttc agcagagcgc 2280
agataccaaa tactgtcctt ctagtgtagc cgtagttagg ccaccacttc aagaactctg 2340
tagcaccgcc tacatacctc gctctgctaa tcctgttacc agtggctgct gccagtggcg 2400
ataagtcgtg tcttaccggg ttggactcaa gacgatagtt accggataag gcgcagcggt 2460
cgggctgaac ggggggttcg tgcacacagc ccagcttgga gcgaacgacc tacaccgaac 2520
tgagatacct acagcgtgag ctatgagaaa gcgccacgct tcccgaaggg agaaaggcgg 2580
acaggtatcc ggtaagcggc agggtcggaa caggagagcg cacgagggag cttccagggg 2640
gaaacgcctg gtatctttat agtcctgtcg ggtttcgcca cctctgactt gagcgtcgat 2700
ttttgtgatg ctcgtcaggg gggcggagcc tatggaaaaa cgccagcaac gcggcctttt 2760
tacggttcct ggccttttgc tggccttttg ctcacatgtt ctttcctgcg ttatcccctg 2820
attctgtgga taaccgtatt accgcctttg agtgagctga taccgctcgc cgcagccgaa 2880
cgaccgagcg cagcgagtca gtgagcgagg aagcggaaga gcgcctgatg cggtattttc 2940
tccttacgca tctgtgcggt atttcacacc gcatatatgg tgcactctca gtacaatctg 3000
ctctgatgcc gcatagttaa gccagtatac actccgctat cgctacgtga ctgggtcatg 3060
gctgcgcccc gacacccgcc aacacccgct gacgcgccct gacgggcttg tctgctcccg 3120
gcatccgctt acagacaagc tgtgaccgtc tccgggagct gcatgtgtca gaggttttca 3180
ccgtcatcac cgaaacgcgc gaggcagctg cggtaaagct catcagcgtg gtcgtgaagc 3240
gattcacaga tgtctgcctg ttcatccgcg tccagctcgt tgagtttctc cagaagcgtt 3300
aatgtctggc ttctgataaa gcgggccatg ttaagggcgg ttttttcctg tttggtcact 3360
gatgcctccg tgtaaggggg atttctgttc atgggggtaa tgataccgat gaaacgagag 3420
aggatgctca cgatacgggt tactgatgat gaacatgccc ggttactgga acgttgtgag 3480
ggtaaacaac tggcggtatg gatgcggcgg gaccagagaa aaatcactca gggtcaatgc 3540
cagcgcttcg ttaatacaga tgtaggtgtt ccacagggta gccagcagca tcctgcgatg 3600
cagatccgga acataatggt gcagggcgct gacttccgcg tttccagact ttacgaaaca 3660
cggaaaccga agaccattca tgttgttgct caggtcgcag acgttttgca gcagcagtcg 3720
cttcacgttc gctcgcgtat cggtgattca ttctgctaac cagtaaggca accccgccag 3780
cctagccggg tcctcaacga caggagcacg atcatgctag tcatgccccg cgcccaccgg 3840
aaggagctga ctgggttgaa ggctctcaag ggcatcggtc gagatcccgg tgcctaatga 3900
gtgagctaac ttacattaat tgcgttgcgc tcactgcccg ctttccagtc gggaaacctg 3960
tcgtgccagc tgcattaatg aatcggccaa cgcgcgggga gaggcggttt gcgtattggg 4020
cgccagggtg gtttttcttt tcaccagtga gacgggcaac agctgattgc ccttcaccgc 4080
ctggccctga gagagttgca gcaagcggtc cacgctggtt tgccccagca ggcgaaaatc 4140
ctgtttgatg gtggttaacg gcgggatata acatgagctg tcttcggtat cgtcgtatcc 4200
cactaccgag atgtccgcac caacgcgcag cccggactcg gtaatggcgc gcattgcgcc 4260
cagcgccatc tgatcgttgg caaccagcat cgcagtggga acgatgccct cattcagcat 4320
ttgcatggtt tgttgaaaac cggacatggc actccagtcg ccttcccgtt ccgctatcgg 4380
ctgaatttga ttgcgagtga gatatttatg ccagccagcc agacgcagac gcgccgagac 4440
agaacttaat gggcccgcta acagcgcgat ttgctggtga cccaatgcga ccagatgctc 4500
cacgcccagt cgcgtaccgt cttcatggga gaaaataata ctgttgatgg gtgtctggtc 4560
agagacatca agaaataacg ccggaacatt agtgcaggca gcttccacag caatggcatc 4620
ctggtcatcc agcggatagt taatgatcag cccactgacg cgttgcgcga gaagattgtg 4680
caccgccgct ttacaggctt cgacgccgct tcgttctacc atcgacacca ccacgctggc 4740
acccagttga tcggcgcgag atttaatcgc cgcgacaatt tgcgacggcg cgtgcagggc 4800
cagactggag gtggcaacgc caatcagcaa cgactgtttg cccgccagtt gttgtgccac 4860
gcggttggga atgtaattca gctccgccat cgccgcttcc actttttccc gcgttttcgc 4920
agaaacgtgg ctggcctggt tcaccacgcg ggaaacggtc tgataagaga caccggcata 4980
ctctgcgaca tcgtataacg ttactggttt cacattcacc accctgaatt gactctcttc 5040
cgggcgctat catgccatac cgcgaaaggt tttgcgccat tcgatggtgt ccgggatctc 5100
gacgctctcc cttatgcgac tcctgcatta ggaagcagcc cagtagtagg ttgaggccgt 5160
tgagcaccgc cgccgcaagg aatggtgcat gcaaggagat ggcgcccaac agtcccccgg 5220
ccacggggcc tgccaccata cccacgccga aacaagcgct catgagcccg aagtggcgag 5280
cccgatcttc cccatcggtg atgtcggcga tataggcgcc agcaaccgca cctgtggcgc 5340
cggtgatgcc ggccacgatg cgtccggcgt agaggatcga gatcgatctc gatcccgcga 5400
aattaatacg actcactata 5420

Claims (8)

1. An enzyme preparation for preparing citicoline, which is characterized in that: the preparation steps are as follows:
firstly, engineering bacteria are constructedEscherichia coli CKI-CCT expresses choline kinase and phosphorylcholine cytidine transferase derived from fusobacterium nucleatum, the choline kinase can catalyze choline chloride to form phosphorylcholine, and the phosphorylcholine cytidine transferase can catalyze phosphorylcholine and CTP to form citicoline; construction of engineering bacteriaEscherichia coli PPK-UDK expresses polyphosphate kinase derived from rhodobacter sphaeroides and cytidine kinase derived from thermus thermophilus, wherein the polyphosphate kinase can be used for catalyzing ATP regeneration, and the cytidine kinase can be used for catalyzing cytidine to form CMP; construction of engineering bacteriaEscherichia coli CMK-NDK expresses cytidine kinase and diphosphonucleotide kinase derived from escherichia coli, the cytidine kinase can be used for catalyzing CMP to form CDP, and the diphosphonucleotide kinase can be used for catalyzing CDP to form CTP;
secondly, crushing enzyme-producing cells obtained by fermentation, centrifuging at 13000rpm for 2min, and collecting supernatant to obtain a crude enzyme solution, namely the enzyme preparation for preparing the citicoline;
the preparation method comprises the following specific steps:
Figure DEST_PATH_IMAGE002
in Escherichia coliE. coliBL21 expresses heterologously choline kinase and phosphorylcholine cytidine transferase coding genes to construct bacterial strain with choline kinase activity and phosphorylcholine cytidine transferase activityEscherichia coli CKI-CCT;
Figure DEST_PATH_IMAGE004
In Escherichia coliE. coliBL21 expresses heterogenous polyphosphate kinase and cytidine kinase coding genes to construct a strain with polyphosphate kinase and cytidine kinase activityEscherichia coli PPK-UDK;
Figure DEST_PATH_IMAGE006
In Escherichia coliE. coliBL21 expresses endogenous gene encoding cytidylic acid kinase and diphosphokinase to construct strain with cytidylic acid kinase and diphosphokinase activityEscherichia coli CMK-NDK;
Figure DEST_PATH_IMAGE008
The recombinant strain constructed above is usedEscherichia coli CKI-CCT、Escherichia coli PPK-UDK andEscherichia coli respectively culturing CMK-NDK in a culture medium, inducing to generate choline kinase with high enzyme activity, phosphorylcholine cytidine transferase, polyphosphate kinase, cytidine kinase, diphosphate kinase and cytidylic acid kinase, and centrifuging to collect enzyme-producing cells;
Figure DEST_PATH_IMAGE010
will be described in detail
Figure 689160DEST_PATH_IMAGE008
Cultured enzyme-producing cellsEscherichia coli CKI-CCT、Escherichia coli PPK-UDK andEscherichia coli suspending CMK-NDK in a balance buffer solution, carrying out cell disruption, centrifuging the disruption solution for 20min at 13000r/min, and taking supernatant, namely crude enzyme solution;
said step (c) is
Figure 681999DEST_PATH_IMAGE002
In which pET-Duet plasmid is used as a vectorE. coli Over-expressing choline kinase and phosphorylcholine cytidyltransferase genes in BL21 to construct a strain with choline kinase activity and phosphorylcholine cytidyltransferase activityE. coli CKI-CCT; wherein the choline kinase coding gene is derived from fusobacterium nucleatum, and amplification primers of the choline kinase coding gene are SEQ ID NO.1 and SEQ ID NO.2; the coding gene of the phosphorylcholine cytidylyltransferase is derived from fusobacterium nucleatum, and the amplification primers are SEQ ID NO.3 and SEQ ID NO.4; the nucleotide sequence of the plasmid pET-Duet is SEQ ID NO.13;
said step (c) is
Figure 727315DEST_PATH_IMAGE004
In which pET-Duet plasmid is used as vectorE. coli Overexpression of polyphosphate kinase and cytidine kinase genes in BL21 to construct bacterial strain with polyphosphate kinase and cytidine kinase activitiesE. coli PPK-UDK; wherein, the polyphosphate kinase coding gene is derived from rhodobacter sphaeroides, and the amplification primers are SEQ ID NO.5 and SEQ ID NO.6; the cytidine kinase coding gene is derived from thermus thermophilus, and amplification primers of the cytidine kinase coding gene are SEQ ID NO.7 and SEQ ID NO.8; the nucleotide sequence of the plasmid pET-Duet is SEQ ID NO.13;
said step (c) is
Figure 201153DEST_PATH_IMAGE006
In which pET-Duet plasmid is used as vectorE. coli Overexpression of cytidylic acid kinase and diphosphokinase genes in BL21, and construction of strain with cytidylic acid kinase activity and diphosphokinase activityE. coli CMK-NDK; wherein, the cytidylic acid kinase coding gene is derived from escherichia coli, and amplification primers of the cytidylic acid kinase coding gene are SEQ ID NO.9 and SEQ ID NO.10; the diphosphokineThe enzyme coding gene is derived from escherichia coli, and amplification primers of the enzyme coding gene are SEQ ID NO.11 and SEQ ID NO.12; the nucleotide sequence of the plasmid pET-Duet is SEQ ID NO.13.
2. The enzyme preparation for producing citicoline according to claim 1, wherein: said step (c) is
Figure DEST_PATH_IMAGE012
The specific steps of culturing the medium recombinant strain in the culture medium are as follows:
(1) slant culture in test tubes: selecting 3-4 rings from a glycerol-protected bacterium tube by using an inoculating ring, streaking and inoculating the ring in a slant culture medium with ampicillin resistance, culturing for 10-14h in an incubator at 37 ℃, and transferring for 1 generation;
(2) and (3) eggplant-shaped bottle slant culture: selecting all thalli from a test tube slant culture medium by using an inoculating loop, streaking and inoculating the thalli into an eggplant-shaped bottle slant culture medium with ampicillin resistance, culturing for 10-14h in an incubator at 37 ℃, and transferring for 2 generations;
(3) inoculating all the bacteria in the eggplant-shaped bottle to a fermentation culture medium with ampicillin resistance, controlling the initial ventilation amount to be 2L/min and the dissolved oxygen to be 20-40%, controlling the pH to be 7.0 by automatically feeding ammonia water, and controlling the culture temperature to be 37 ℃;
(4) cultured to OD 600 When the concentration is not less than 12-14, adding IPTG (isopropyl thiogalactoside) with the final concentration of 0.1-0.3mM to induce and express the target protein, adjusting the induction temperature to 25-30 ℃, and performing induced culture for 6-8h to collect thalli;
(5) centrifuging at 8000r/min and 4 deg.C for 15min, collecting thallus, taking physiological saline or PBS buffer solution, shaking, resuspending and cleaning thallus for 2 times, centrifuging, and storing in-80 deg.C refrigerator for use.
3. The enzyme preparation for producing citicoline according to claim 2, wherein: the slant culture medium is as follows: 5g/L of glucose, 10g/L of peptone, 5g/L of yeast extract, 10g/L of beef extract, 5g/L of NaCl, 25g/L of agar, pH 7.0-7.2, and sterilizing at 121 ℃ for 20min;
the fermentation medium comprises: glucose 20g/L, yeast extractFetching 5g/L, corn steep liquor 30g/L, naCl 5g/L, KH 2 PO 4 1 g /L,MgSO 4 0.5 g /L,V H 1mg/L, pH 6.5-7.2, wherein glucose is sterilized at 115 deg.C for 15min, and other components are sterilized at 121 deg.C for 20min.
4. The enzyme preparation for producing citicoline according to any one of claims 1 to 3, wherein: said step (c) is
Figure 77842DEST_PATH_IMAGE010
Three kinds of colibacillusEscherichia coli CKI-CCT、Escherichia coli PPK-UDK andEscherichia coli the ratio g of the cell wet weight amount of CMK-NDK to the equilibration buffer: mL are in order 12: 50. 10:50 and 8:50;
alternatively, the equilibration buffer is 50mM Na 2 HPO 4 And/or 300mM NaCl, pH adjusted to 8.0 with NaOH; or the cell disruption method comprises ultrasonic disruption, freeze-thaw disruption, liquid nitrogen grinding disruption or high-pressure homogenate disruption, wherein the disruption conditions of the high-pressure homogenate disruption are as follows: 4. 800-1000bar at deg.C.
5. Use of an enzyme preparation according to any one of claims 1 to 4 for the preparation of citicoline.
6. Process for the catalytic preparation of citicoline using an enzyme preparation according to any of claims 1 to 4, characterized in that: the method comprises the steps of taking an enzyme preparation as a catalyst, taking choline chloride, cytidine, sodium hexametaphosphate and ATP as substrates, mixing the enzyme preparation with choline chloride, magnesium chloride, sodium hexametaphosphate, ATP, cytidine and Tris-HCL buffer solution, carrying out enzyme catalytic reaction, controlling the temperature at 30 ℃, controlling the stirring speed at 300r/min, and synthesizing the citicoline by feeding NaOH or HCL to maintain the pH value at 8.0 in the reaction process.
7. The method for preparing citicoline catalyzed by enzyme preparation according to claim 6, wherein: the concentration of choline chloride in the reaction system was 30mM, the concentration of magnesium chloride was 60mM, the concentration of sodium hexametaphosphate was 60mM, the concentration of cytidine was 30mM, the concentration of ATP was 5mM, the pH =8.0 of Tris-HCl buffer, and the concentration was 100mM.
8. The method for preparing citicoline catalyzed by enzyme preparation according to claim 6 or 7, wherein: the detection method of citicoline in the obtained reaction liquid comprises the following steps: inactivating reaction liquid in boiling water bath, centrifuging at 13000r/min for 2min, taking supernatant, diluting to 1g/L with deionized water, filtering with sterile membrane of 0.22 μm to liquid phase bottle for analysis; determining content of citicoline by high performance liquid chromatography, wherein the sample volume is 20 μ L, the chromatographic column is Sepax HP-SAX (4.6 × 250 mM), and the mobile phase is 50mM KH 2 PO 4 ,H 3 PO 4 Adjusting pH to 3.5, column temperature to 30 deg.C, flow rate to 1mL/min, detection wavelength to 254nm, and citicoline retention time to 6.5min.
CN202011148184.8A 2020-10-23 2020-10-23 Enzyme preparation for preparing citicoline and method for preparing citicoline through enzyme catalysis Active CN112481233B (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
CN202011148184.8A CN112481233B (en) 2020-10-23 2020-10-23 Enzyme preparation for preparing citicoline and method for preparing citicoline through enzyme catalysis

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
CN202011148184.8A CN112481233B (en) 2020-10-23 2020-10-23 Enzyme preparation for preparing citicoline and method for preparing citicoline through enzyme catalysis

Publications (2)

Publication Number Publication Date
CN112481233A CN112481233A (en) 2021-03-12
CN112481233B true CN112481233B (en) 2022-11-29

Family

ID=74926859

Family Applications (1)

Application Number Title Priority Date Filing Date
CN202011148184.8A Active CN112481233B (en) 2020-10-23 2020-10-23 Enzyme preparation for preparing citicoline and method for preparing citicoline through enzyme catalysis

Country Status (1)

Country Link
CN (1) CN112481233B (en)

Families Citing this family (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN113025592B (en) * 2021-04-28 2022-06-24 上海邦林生物科技有限公司 High-performance polyphosphate kinase mutant and application thereof
CN114262726A (en) * 2022-01-11 2022-04-01 深圳华酶生物科技有限公司 Method for synthesizing citicoline sodium by using cytidine enzymatic method
CN116144559A (en) * 2022-09-26 2023-05-23 天津科技大学 Genetically engineered bacterium for producing citicoline and construction method and application thereof
CN116445385A (en) * 2023-03-14 2023-07-18 江苏香地化学有限公司 Method for producing citicoline
CN116790466B (en) * 2023-07-19 2023-11-03 山东理工大学 Method for producing citicoline by engineering bacillus subtilis fermentation

Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN104774799A (en) * 2015-04-17 2015-07-15 南京工业大学 Genetically engineered bacterium for expressing choline kinase and phosphorylcholine cytidine transferase, and construction method and application thereof

Patent Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN104774799A (en) * 2015-04-17 2015-07-15 南京工业大学 Genetically engineered bacterium for expressing choline kinase and phosphorylcholine cytidine transferase, and construction method and application thereof

Non-Patent Citations (2)

* Cited by examiner, † Cited by third party
Title
Genome Sequence and Analysis of the Oral Bacterium Fusobacterium nucleatum Strain ATCC 25586;Vinayak Kapatral et al.;《JOURNAL OF BACTERIOLOGY》;20020430;第2005-2018页 *
固定化尿苷-胞苷激酶和聚磷酸激酶偶联催化制备5′-胞苷酸;吴思佳;《生物工程学报》;20200525;第1002-1011页 *

Also Published As

Publication number Publication date
CN112481233A (en) 2021-03-12

Similar Documents

Publication Publication Date Title
CN112481233B (en) Enzyme preparation for preparing citicoline and method for preparing citicoline through enzyme catalysis
AU2017280335B2 (en) Nucleic acid synthesis and sequencing using tethered nucleoside triphosphates
KR20230061473A (en) Nitrated psilocybin derivatives and their use for modulating the 5-HT2A receptor and treating psychiatric disorders
JP4648975B2 (en) Method for producing D-psicose by D-psicose epimerase
AU668505B2 (en) Oligosaccharide enzyme substrates and inhibitors: methods and compositions
CN109486737B (en) Recombinant escherichia coli with high L-tryptophan yield and construction method thereof
DK2145956T3 (en) Polymerase
US9169507B2 (en) Modified RNA ligase for efficient 3′ modification of RNA
JP2019500324A (en) Nucleotide analogues
US5461143A (en) Oligosaccharide enzyme substrates and inhibitors: methods and compositions
CN111849845B (en) Engineering bacterium for producing 5-aminopentanoic acid by whole cell catalysis and preparation method of 5-aminopentanoic acid
JP2023012498A (en) Enzymatic synthesis of 4&#39;-ethyl nucleoside analogs
CN111218431A (en) Monooxygenase and application thereof in preparation of optically pure sulfoxide
JP2017509341A (en) T7 RNA polymerase variants with extended substrate coverage and enhanced transcription output
WO2007069693A1 (en) Long-chain chondroitin sugar chain and method for producing the same and method for promoting synthesis of chondroitin
CN106701723B (en) D-Fructose -6- phosphate aldolase A mutant, recombinant expression carrier, genetic engineering bacterium and its application and reaction product
CN111304141A (en) Recombinant escherichia coli for producing N-acetyl-5-hydroxytryptamine and construction method and application thereof
CN113801868B (en) Sandalene synthase mutant and preparation method thereof
WO2019095161A1 (en) Transaminase mutant and application thereof
CN105018405A (en) Constitutive expression genetically engineered bacterium and application thereof to produce L-alanine
TWI719140B (en) New polyphosphate-dependent glucokinase and method for preparing glucose 6-phosphate using the same
HUE030417T2 (en) Production of symmetric and asymmetric disulphides by reactive distillation of disulphide mixtures
CN109554322B (en) Recombinant Escherichia coli with high L-threonine yield and construction method thereof
CN111041018A (en) Biosynthesis method of branched ketose
CN109679978B (en) Recombinant co-expression system for preparing L-2-aminobutyric acid and application thereof

Legal Events

Date Code Title Description
PB01 Publication
PB01 Publication
SE01 Entry into force of request for substantive examination
SE01 Entry into force of request for substantive examination
GR01 Patent grant
GR01 Patent grant