CN110066870A - Application of hsa-miR-382-5p in preparation of kit for diagnosing retinal degeneration diseases - Google Patents
Application of hsa-miR-382-5p in preparation of kit for diagnosing retinal degeneration diseases Download PDFInfo
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Abstract
The invention discloses application of hsa-miR-382-5p in preparation of a kit for diagnosing retinal degeneration diseases. A diagnostic kit for retinal degeneration diseases comprises a reagent for detecting the expression quantity of hsa-miR-382-5 p. The application of the substance for inhibiting the expression quantity of hsa-miR-382-5p in the preparation of the medicine for treating the retinal degeneration disease. Researches show that the expression quantity of hsa-miR-382-5p is increased to be used as an auxiliary diagnosis basis for retinal degeneration diseases, and the early diagnosis of the retinal degeneration diseases is facilitated. The damage effect of hsa-miR-382-5p on retina suggests that the hsa-miR-382-5p can be used for preparing and screening medicaments for treating retinal degeneration diseases. The invention provides a novel detection marker and a novel therapeutic target for retinal degenerative diseases, and provides brand-new molecular information and biological basis for diagnosis and treatment of the diseases.
Description
Technical field
The invention belongs to fields of biomedicine, are related to Microrna hsa-miR-382-5p preparation diagnosis retinosis disease
Application in the kit of disease.
Background technique
Blinding eye disease is the third-largest influence human health disease of World Health Organization, global about 2.5 hundred million eyesights
Disabled person and China accounts for nearly 20%.Retinal degenerative disease there is no effective treatment method at present, is important blinding eye disease, is
The sciences problems and great public health problem urgently captured.The pathogenesis multiplicity of retinal degenerative disease, can according to the cause of disease
To be divided into the hereditary retinal dystrophy disease as caused by single-gene defect and the complexity retina as caused by multifactor damage
Degenerative disease.
Hereditary retinal dystrophy disease be with inherent cause it is closely related, with primary degeneration of retina be main pathology
Change, be badly damaged with visual functions such as eyesight and the visuals field as main clinical phenotypes.Hereditary retinal dystrophy disease is world's model
The primary blinding eye disease of disease incidence in interior work age groups is enclosed, disease incidence is about 1/3000 in developed country, at me
State is then higher, and only the disease incidence of retinal pigment degeneration is as high as 1/1000 or so, estimates the Inherited retinal in China accordingly
Degenerative disease patient is more than 1,300,000.Clinically it there is no effective therapeutic modality for hereditary retinal dystrophy disease at present, sternly
The health of compatriots is compromised again.
Age-related macular degeneration (age-related macular degeneration, AMD) is most commonly seen
A kind of complexity retinal degenerative disease, also referred to as senile macular degeneration are that the aging of macula lutea plot structure sexually revises, the head of patient
Sending out clinical symptoms is metamorphopsia and visual impairment.AMD mostly occurs in 45 years old or more crowd, illness rate with the growth at age and by
Step increases, and is the irreversible blind first cause of elderly population in world wide.In China, with the acceleration of population aging, AMD
Illness rate increase year by year, show AMD in each age group crowd of Shanghai City according to the cri dernier cri disease statistical result in multiple cities
Recall rate respectively be up to 6.23% (60~69 years old), 14.98% (70~79 years old) and 29.91% (80 years old or more), Wuxi City
The recall rate of AMD then be respectively 3.43% (50~59 years old), 7.73% (60~69 years old), 14.69% (70~79 years old) and
16.51% (80 years old or more), more some researches show that, Hangzhou cause 70 years old and the cause of disease of above the elderly's inpairment of vision in,
AMD accounts for 45.64%, these epidemic datas all show AMD gradually as the irreversible vision impairment of China's elderly population
Main cause.Can be divided AMD according to the course of disease of disease in clinical manifestation then can further divide for early and late AMD, advanced stage AMD
For stemness and moist amphitypy.Clinical effective therapeutic modality still without being directed to stemness AMD at present.It is clinical at present for moist AMD
Upper master is to be used to be treated for anti-vegf, and anti-VEGF antibody can effectively inhibit the expression of VEGF, inhibit the generation of CNV and reduction
Vascular leakage.However, there is also a series of defects for anti vegf agents treatment, multiple intraocular injection is generally required, is increased
The pain of patient has also aggravated financial burden, and the therapeutic effect of anti vegf agents differs greatly with different patients, part
Patient's unsatisfactory curative effect after the treatment of multiple anti-vegf, eyesight still can not improve or improve unobvious.Retinal degenerative disease is not only
The quality of life of our people is drastically influenced, also brings harm to the development of national economy.Therefore, to retinosis disease
The early diagnosis of disease is intervened, and finds novel, sensitive and applies convenient disease detection marker, view can effectively be controlled by finding
The treatment and prevention means of nethike embrane degenerative disease disease, are of great practical significance.
Microrna (MicroRNA, miRNA) is tiny RNA of a kind of length between 20-24 nucleotide, in the cell
With a variety of important adjustment effects, the post-transcriptional control of gene is participated in.It is assumed that miRNA adjusts one of trichotomy
Gene.The regulating networks of this complexity can both regulate and control the expression of multiple genes by a miRNA, can also be by several
The combination of miRNA carrys out the expression of some gene of finely regulating.MiRNA depends primarily on it and target base to the effect of target gene mRNA
Because of the degree of transcription sequence complementation: (1) cut off the mRNA molecule of target gene: miRNA is in conjunction with target gene complete complementary, effect
Mode and function are closely similar with siRNA, finally cut said target mrna;(2) inhibit the translation of target gene: miRNA and target gene are not
Complete complementary combines, stability of the aporepressor translation without influencing mRNA.MiRNA participates in intracellular various procedures regulation,
Play a significant role in numerous vital movements, at the same also with the generation of many diseases, development there is very closely contact.
MiRNA can be used as a new class of disease markers, its specific variations are inevitable associated with disease generation development.Meanwhile
MiRNA is alternatively arranged as potential drug target, by inhibiting the miRNA raised in lysis or being overexpressed downward
MiRNA, it would be possible to greatly alleviate the occurrence and development of disease.
Summary of the invention
The object of the present invention is to provide the new opplications of hsa-miR-382-5p.
The purpose of the present invention can be achieved through the following technical solutions:
It is a kind of detect hsa-miR-382-5p expression quantity reagent preparation diagnosis retinal degenerative disease kit in
Application, it is characterised in that the hsa-miR-382-5p sequence is as shown in SEQ ID NO.4.
The reagent of the detection hsa-miR-382-5p expression quantity preferably has detection special hsa-miR-382-5p
Anisotropic probe, genetic chip or real-time quantitative PCR (quantitative real-time polymerase chain
Reaction, Q-PCR) primer.
Described has the stem-loop RT PCR primer sequence of detection specificity preferably such as to hsa-miR-382-5p
Under:
GTCGTATCCAGTGCAGGGTCCGAGGTATTCGCACTGGATACGACCGAATC(SEQ ID NO.1)。
Described has the Q-PCR primer of detection specificity preferably as follows hsa-miR-382-5p:
Upstream primer: GCGCGAAGTTGTTCGTGGTG (SEQ ID NO.2);
Downstream primer: GTGCAGGGTCCGAGGT (SEQ ID NO.3).
A kind of diagnostic kit of retinal degenerative disease, the reagent comprising detecting hsa-miR-382-5p expression quantity.
The kit is preferably comprised to the hsa-miR-382-5p probe with detection specificity or to hsa-miR-
382-5p has the real-time quantitative PCR primer of detection specificity.
Described has the probe sequence of detection specificity as shown in SEQ ID NO.1 hsa-miR-382-5p;It is described
To hsa-miR-382-5p have detection specificity real-time quantitative PCR primer such as SEQ ID NO.2 and SEQ ID NO.3 institute
Show.
Inhibit application of the substance of hsa-miR-382-5p expression quantity in the drug of preparation treatment retinal degenerative disease.
Application of the hsa-miR-382-5p as drug target in the drug of screening treatment retinal degenerative disease.
The utility model has the advantages that
1. applicant filters out hsa-miR-382-5p conduct on the basis of being engaged in clinical treatment and basic research for many years
The detection marker of retinal degenerative disease, and hsa-miR-382-5p and retinosis disease are specified by the method for the invention
The relationship of disease.
2. inventor is it has been investigated that hsa-miR-382-5p expression quantity increases the auxiliary that can be used as retinal degenerative disease
Diagnosis basis helps the early diagnosis for realizing retinal degenerative disease.Damaging effect of the hsa-miR-382-5p to retina,
It is prompted to can be used for preparing and screening the drug for treating retinal degenerative disease.The present invention provides new retinosises
The detection marker and therapy target of disease provide completely new molecular information and biologically-based for the diagnosing and treating of the disease
Plinth.
Detailed description of the invention
Fig. 1 hsa_circ_0001543 is in the retinal tissue of 6 normal persons and 9 retinal degenerative disease patients
Expression compare
Fig. 2 hsa_circ_0001543 and hsa-miR-382-5p interaction sites schematic diagram
Luciferase reporter gene experimental result in Fig. 3 ARPE19 cell
Hsa-miR-382-5p strikes the (hsa_circ_ that comes down to a lower group in hsa_circ_0001543 in Fig. 4 ARPE19 cell
0001543siRNA) compared with the expression in control group (scramble siRNA)
The expression of Fig. 5 U6, GAPDH and hsa-miR-382-5p in ARPE19 cytoplasm and nucleus compares
Retinal specific marker gene is in hsa-miR-382-5p overexpression group (hsa-miR- in Fig. 6 ARPE19 cell
382-5p mimic) compared with the expression in control group (NC mimic)
Retinal specific labelled protein BEST1 is in hsa-miR- in the ARPE19 cell that Fig. 7 immunofluorescence dyeing is shown
382-5p overexpression group is compared with the expression in control group
Cell connects specific marker proteins ZO-1 in hsa-miR- in the ARPE19 cell that Fig. 8 immunofluorescence dyeing is shown
382-5p overexpression group is compared with the expression in control group
Cell connection specific marker proteins β-catenin exists in the ARPE19 cell that Fig. 9 immunofluorescence dyeing is shown
Hsa-miR-382-5p overexpression group is compared with the expression in control group
The microsphere particle swallowed in the ARPE19 cell that Figure 10 immunofluorescence dyeing is shown crosses table in hsa-miR-382-5p
Up to group compared with the content situation in control group
The microsphere particle swallowed in Figure 11 ARPE19 cell content in hsa-miR-382-5p overexpression group and control group
Quantization compare
ARPE19 cell Mitochondria active oxygen (the reactive oxygen that Figure 12 immunofluorescence dyeing is shown
Species, ROS) in hsa-miR-382-5p overexpression group compared with content in control group
The amount of Figure 13 ARPE19 cell Mitochondria ROS content in hsa-miR-382-5p overexpression group and control group
Change is compared
The cell of the EdU positive is overexpressed in hsa-miR-382-5p in the ARPE19 cell that Figure 14 immunofluorescence dyeing is shown
Group is compared in control group
The cell proportion of the EdU positive is in hsa-miR-382-5p overexpression group and control group in Figure 15 ARPE19 cell
Comparison
Mouse Retina pigment epithelium that Figure 16 immunofluorescence dyeing is shown (retinal pigment epithelium,
RPE) in tissue ZO-1 albumen expression quantity mmu-miR-382-5p overexpression group (mmu-miR-382-5p agomir) with it is right
Compare according to the expression in group (NC agomir)
The expression quantity of β-catenin albumen is in mmu-miR- in the mouse RPE tissue that Figure 17 immunofluorescence dyeing is shown
382-5p overexpression group is compared with the expression in control group
The Mouse Retina RPE and photosensory cell that Figure 18 transmission electron microscope is shown mmu-miR-382-5p overexpression group with it is right
According to the Morphological comparison in group
Specific embodiment
Embodiment 1:
Our induce multi-potent stem cell-retinal color to each different divergaence time points by circRNA chip early periods
Plain epithelial cell (induced pluripotent stem cells-retinal pigment epithelium, iPSC-
RPE the detection for) having carried out circRNA expression quantity finds the expression quantity of hsa_circ_0001543 with RPE cell differentiation
Increase and increase, height prompts potential important function of the hsa_circ_0001543 in RPE cell differentiation procedure.For into one
Pathology sense of the clear hsa_circ_0001543 in retinal degenerative disease is walked, we are first in normal control and retina
The expression quantity of hsa_circ_0001543 is detected in the retinal tissue of degenerative disease patient.
Experimental method:
1. the acquisition of normal control and the blood preparation of retinal degenerative disease patient:
Collect the blood sample of patient and 6 normal controls that 9 clinical definites are retinal degenerative disease voluntarily contributed
This, carries out RNA extraction.With 5~8mL of peripheric venous blood of EDTA anticoagulant blood-collecting pipe collection research object, total serum IgE is extracted.
2.Q-PCR detection:
Further by reverse transcription PCR (reverse transcription-PCR, RT-PCR) and Q-PCR to blood rna
The expression quantity of hsa_circ_0001543 is detected in sample.
RT-PCR:
Reverse transcription reaction is carried out by following system using Takara Reverse Transcriptase kit, mRNA is transcribed into cDNA, is reacted
System (40 μ l) is as follows:
Reaction condition: room temperature 10min, 42 DEG C of 45min, 95 DEG C of 5min, 4 DEG C of 5min.
Q-PCR:
Q-PCR reaction is carried out using the cDNA template generated by RT-PCR, reaction system is as follows:
Involved primer sequence is referring to following table:
Q-PCR reaction condition:
According to formula R (relative expression quantity)=2-ΔΔct=2[(ct sample-ct internal reference)-(ct blank-ct internal reference blank)]Calculate relative expression quantity.
Experimental result:
Chip test result discovery hsa_circ_0001543 is deposited in retinal degenerative disease patient and Normal group
In differential expression, the expression in the retina group of retinal degenerative disease patient significantly reduces (figure compared with normal control
1).Disease associated, the hsa_circ_0001543 of hsa_circ_0001543 and retinal degenerative disease is further prompted
It may play the role of to the course of disease of retinal degenerative disease protective.
2 hsa_circ_0001543 of embodiment can adsorb hsa-miR-382-5p as miRNA sponge, regulate and control its table
It reaches
We have found that hsa_circ_0001543 and miRNA hsa-miR-382-5p is deposited by online sequence alignment program
At potential interaction sites (Fig. 2), prompt hsa_circ_0001543 that may can be used as miRNA sponge absorption hsa-miR-
382-5p.To confirm this viewpoint, we detect the interaction relationship of the two by luciferase reporter gene experiment,
And hsa_circ_0001543 is detected by Q-PCR referring to embodiment 1, the expression regulation of hsa-miR-382-5p is acted on.
Experimental method:
1. the building of Reporter gene vector:
Using human gene group DNA as template, the hsa_circ_0001543 sequence of PCR amplification wild type (WT), PCR product is pure
Change, recycling, using the T-A Cloning Kit of Promega company, clone's building obtains the hsa_circ_0001543 sequence with WT
The carrier of column, reaction system (10 μ l) are as follows:
After 4 DEG C of connections overnight, using being converted in DH5 α competent cell, growth is stayed overnight, the single colonies of picking,
Carry out digestion identification, the specific steps are as follows:
(1) preparation of DH5 α competent cell
The E.coli DH5 α single colonie newly activated from picking on LB plate, is inoculated in 3~5ml LB liquid medium,
Shaken cultivation 12h or so at 37 DEG C, until the logarithmic growth later period.The bacteria suspension is inoculated in the ratio of 1:100~1:50
In 100ml LB liquid medium, 37 DEG C of 2~3h to OD600 ≈ of shaken cultivation 0.5 or so.Culture solution is transferred in centrifuge tube,
10min is placed on ice, and then 3000rpm is centrifuged 10min at 4 DEG C.It discards supernatant, with the CaCl of the 0.05mol/L of pre-cooling2It is molten
Liquid 10ml gently suspension cell, after placing 30min on ice, 3000rpm is centrifuged 10min at 4 DEG C.It discards supernatant, 4ml pre-cooling is added
0.05M CaCl containing 15% glycerol2Solution, gently suspension cell, is placed several minutes on ice, competent cell suspension.Sense
It is distributed into the aliquot of 200 μ l by state cell, is stored in -70 DEG C of storable half a year;
(2) conversion of connection product
Full dose (10 μ l) is added into E.coli DH5 α competent cell, and 30min is placed in ice;42 DEG C of heat shocks
45sec, then 1min is placed in ice;Be added 890 μ l LB culture mediums, after 37 DEG C of shaken cultivation 60min, containing X-Gal,
It is incubated overnight on the L- Agar Plating of IPTG, Amp, forms single colonie;
(3) screening and identification of positive colony
5~6 white colonies of picking, are inoculated in the LB culture medium that 2ml contains Amp, 37 DEG C respectively, 220rpm oscillation training
It supports overnight.Plasmid is extracted using plasmid extraction kit (Promega company).Spectrophotometric determination plasmid concentration, plasmid warp
XbaI single endonuclease digestion Preliminary Identification, plasmid pMD18T-MPFG-flag single endonuclease digestion reaction system (20 μ l) are as follows:
After 37 DEG C of digestion 4h, through 1% agarose gel electrophoresis, the sample of the digestion positive recycles mesh using plastic recovery kit
Segment, it is spare.Every part of mark product take 200ng Plasmid DNA that Nanjing Jin Sirui company is sent to be sequenced respectively simultaneously.Sequencing result is just
True sample marks spare.After sequencing is confirmed that sequence is correct, by by the segment after XbaI enzyme cutting, connect into same enzyme
PGL3-Promoter carrier after cutting forms plasmid.Reaction system (20 μ l) is as follows:
After 4 DEG C of connections overnight, conversion, digestion is selected positive colony, is verified by bidirectional sequencing.The correct sample of sequencing result
Product, the purpose plasmid Circ of as WTWT;
(5) with plasmid CircWTFor template, QuikChange Lightning Site-Directed is utilized
Mutagenesis kit (Aglient company, the U.S.), in CircWTThe mutation being introduced into Fig. 2 in plasmid, obtains plasmid
CircMU, reaction system (50 μ l) is as follows:
PCR reaction condition:
2 μ l DpnI restriction enzymes are added in PCR reaction product, after reacting 5min at 37 DEG C, product purification turns
Change, digestion is selected positive colony, verified by bidirectional sequencing.The correct sample of sequencing result, the purpose plasmid of as MU
CircMU。
2. luciferase reporter gene is tested:
(1) the previous day transfected is with 5 × 105The quantity in/hole is planted respectively into ARPE19 cell;
(2) by internal reference plasmid CMV-Renilla (Promega company) respectively with NC mimic/hsa-miR-382-5p
Mimic and CircWT/CircMUIt is transfected into ARPE19 cell jointly;
(3) 48h receives cell after transfecting, and abandons culture solution, and ice-cold PBS is washed twice, and the detection of Luciferase reporter gene is added
Albumen is extracted in 100 hole μ l/ 1 × lysis buffer that (Promega company) provides in kit;
(4) 20 μ l albumen are added in the firefly reaction substrat of every 100 μ l of pipe, are put at once
Machine testing readings on GloMax-96 luminometer measures respectively and records Luciferase fluorescent value and CMV-Renilla
Fluorescent value, use wherein CMV-Renilla fluorescent value balance transfection efficiency as internal reference.Each experimental group is all provided with three pairs
It averages in hole.Experimental result:
It is prompted by the luciferase reporter gene experimental result of Fig. 3, compared to NC mimic and CircWTCotransfection group,
Hsa-miR-382-5p mimic and CircWTThe uciferase activity of cotransfection group is remarkably decreased, and NC mimic and CircMU
Cotransfection group is compared to hsa-miR-382-5p mimic and CircMUThe uciferase activity of cotransfection group is without significant difference.By
The Q-PCR result of Fig. 4 prompts, and the expression quantity of hsa-miR-382-5p significantly increases in hsa_circ_0001543 strikes and comes down to a lower group,
Hsa_circ_0001543 is prompted to there is expression negative regulation to hsa-miR-382-5p.Accordingly, it is believed that hsa_circ_
0001543 can adsorb hsa-miR-382-5p as miRNA sponge, and reduce the expression of hsa-miR-382-5p.
The analysis of 3 hsa-miR-382-5p intracellular targeting of embodiment
Hsa-miR-382-5p is expressed in ARPE19 cell by caryoplasm separation RNA quantitative detection experiment and is determined
U6 is set as nucleus specific localization reference by position, and GAPDH is the reference of cytoplasm specific localization, and caryoplasm separates RNA and extracts institute
Use PARISTMKit (Invitrogen company), RNA quantitative detecting method is referring to embodiment 1.In strict accordance with reagent
Box specification is operated.
Experimental result:
Caryoplasm separation RNA extracts discovery hsa-miR-382-5p and is mainly expressed in the cytoplasm of ARPE19 cell (Fig. 5).
Influence of 4 hsa-miR-382-5p of embodiment to RPE cell function related genes and protein expression
In retinal degenerative disease, the expression of RPE cell degeneration, RPE cell function related genes and albumen is lowered,
RPE cell is caused dysfunction occur.For pathological effect of the clear hsa-miR-382-5p in retinal degenerative disease, we
Have detected its influence to RPE cell function related genes and protein expression.Two groups of different ARPE19 cell processing are set altogether
Group, respectively hsa-miR-382-5p overexpression group (hsa-miR-382-5p mimic) and its control group (NC mimic).Its
In, NC mimic and hsa-miR-382-5p mimic are purchased from Rui Bo biotech firm.
Experimental method:
1. extracting the RNA in cell first.
2. by reverse transcription PCR (reverse transcription-PCR, RT-PCR) and Q-PCR, to different disposal group
The table of retinal specific marker gene (including MITF, RLBP1, LRAT, KRT18, CTNNB1 and TJP1) in ARPE19 cell
Up to being detected.
RT-PCR:
Reverse transcription reaction is carried out by following system using Takara Reverse Transcriptase kit, mRNA is transcribed into cDNA, is reacted
System (40 μ l) is as follows:
Reaction condition: room temperature 10min, 42 DEG C of 45min, 95 DEG C of 5min, 4 DEG C of 5min.
Q-PCR:
Q-PCR reaction is carried out using the cDNA template generated by RT-PCR, reaction system is as follows:
Involved primer sequence is referring to following table:
Q-PCR reaction condition:
According to formula R (relative expression quantity)=2-ΔΔct=2[(ct sample-ct internal reference)-(ct blank-ct internal reference blank)]Calculate relative expression quantity.
3. by immunofluorescence dyeing, to retinal specific labelled protein BEST1 in different disposal group ARPE19 cell,
The expression of cell connection specific marker proteins ZO-1 and β-catenin detects, and steps are as follows for specific experiment:
(1) cell climbing sheet: cell is laid in 8 hole Chamber slide tissue culture plates (Millipore company), reference
Cell culture part;
(2) go out from incubator and take out cell, after PBS washing, 4% paraformaldehyde (paraformaldehyde, PFA) is fixed
30~60min;
(3) after PBS rinses 10min, 0.5%Triton X-100 perforation 20min;
(4) PBS is rinsed 2 times, and after each 10min, 1%BSA closes 30min;
(5) the diluted primary antibody of 1%BSA is added, in 4 DEG C of hybridized overnights;
(6) PBS is rinsed 2 times, and after each 10min, the diluted fluorescence secondary antibody of 1%BSA, 37 DEG C of hybridization 2h are added;
(7) PBS is rinsed 2 times, and after each 10min, DAPI (Sigma company) the dye core containing anti-quencher simultaneously prevents fluorescence
It is quenched, mounting;
(8) it Olympus IX70 confocal laser scanning microscope and takes pictures.
Related antibody information is referring to following table:
Experimental result:
The result of Q-PCR prompts, retinal specific marker gene in ARPE19 cell (including MITF, RLBP1, LRAT,
KRT18, CTNNB1 and TJP1) expression (figure is significantly reduced in hsa-miR-382-5p overexpression group compared with its control group
6).The result of immunofluorescence dyeing prompts, and retinal specific labelled protein BEST1, cell connection are special in ARPE19 cell
The fluorescence intensity of property labelled protein ZO-1 and β-catenin obviously weaken in hsa-miR-382-5p overexpression group compared with control group
(Fig. 7,8,9) further prompt the expression quantity of these albumen significantly to drop in hsa_circ_0001543 strikes and comes down to a lower group compared with control group
It is low.
To sum up, ours as a result, it has been found that be overexpressed hsa-miR-382-5p be able to suppress RPE cell function related proteins
Expression, further prompt its latent lesion to RPE cell and in the retinal degenerative disease course of disease to act on.
Influence of 5 hsa-miR-382-5p of embodiment to RPE cytophagy
Two groups of different ARPE19 cell processing groups, respectively hsa-miR-382-5p overexpression group and its control are set altogether
Group, with embodiment 3.Polystyrene latex microballoon (Sigma company) the specific detection different disposal group modified by carboxylate
The phagocytic function of APRE19 cell.The microsphere particle has green fluorescence, and can be swallowed by RPE cell, by detecting and comparing
Compared with the intensity of the intracellular green fluorescence of different disposal group APRE19, to help to assess the phagocytic activity of RPE cell.It is intracellular green
Color fluorescence intensity is higher, shows that the microsphere particle of cell phagocytosis is more, the phagocytic activity of RPE cell is stronger.Experimental implementation is stringent
It is carried out according to kit specification.
Experimental result:
The intracellular green fluorescence intensity of ARPE19 obviously weakens (figure in hsa-miR-382-5p overexpression group compared with control group
10,11) microsphere particle, swallowed in prompt RPE substantially reduces in hsa-miR-382-5p overexpression group compared with control group.We
The result shows that hsa-miR-382-5p is able to suppress the phagocytosis of RPE cell, further prompted it to RPE cell and in view
Latent lesion effect in the film degenerative disease course of disease.
6 hsa-miR-382-5p of embodiment to RPE cellular oxidation stress influence
Two groups of different ARPE19 cell processing groups, respectively hsa-miR-382-5p overexpression group and its control are set altogether
Group;With embodiment 3.By MitoSOX red mitochondria superoxides fluorescence probe, (Thermo Fisher Scientific is public
Department) content of mitochondria activity oxygen (ROS) in each processing group living cells of specific detection, to help to assess the oxygen of RPE cell
Change stress situation.Intracellular red fluorescence intensity is higher, shows that the ROS content generated into the cell is higher, and RPE cell is in oxidation
Stress situation.Experimental implementation is carried out in strict accordance with kit specification.
Experimental result:
By Figure 12 and Figure 13 as it can be seen that the fluorescence intensity of hsa-miR-382-5p overexpression group ARPE19 cell is significantly stronger than pair
According to group, show that the intracellular ROS content of ARPE19 significantly increases in hsa-miR-382-5p overexpression group compared with control group.We
The result shows that hsa-miR-382-5p can promote the oxidative stress of RPE cell, further prompted its to RPE cell and
Latent lesion effect in the retinal degenerative disease course of disease.
Influence of 7 hsa-miR-382-5p of embodiment to RPE ability of cell proliferation
Two groups of different ARPE19 cell processing groups, respectively hsa-miR-382-5p overexpression group and its control are set altogether
Group;With embodiment 3.ByEdU Alexa488Imaging Kit (Invitrogen company) statistics is different
The EdU positive cell ratio of processing group ARPE19 cell, to help to assess the proliferative capacity of cell.Experimental implementation in strict accordance with
Kit specification carries out.
Experimental result:
Figure 14 and Figure 15 are shown: the cell proportion of the EdU positive is aobvious in hsa-miR-382-5p overexpression group ARPE19 cell
It writes and is higher than control group.As it can be seen that the proliferative capacity of ARPE19 cell is significant compared with control group in hsa-miR-382-5p overexpression group
It improves.Our result indicate that being overexpressed the proliferation that hsa-miR-382-5p is able to suppress RPE cell, prompt it in RPE cell
Potential inhibiting effect in atomization has further prompted it latent to RPE cell and in the retinal degenerative disease course of disease
In damaging effect.
Influence of 8 mmu-miR-382-5p of embodiment in mouse to its RPE form and functional dependency protein expression
Two eyes of same mouse are set to mmu-miR-382-5p mistake by the C57BL/6 mouse for selecting 5-6 week old
Expression group (mmu-miR-382-5p agomir (sequence is as shown in SEQ ID NO.5);Mmu-miR-382-5p is hsa-miR-
382-5p corresponding same miRNAs in mouse) and control group (NC agomir), the specific operation method is as follows:
(1) 4.3% chloraldurate 0.01ml/g intraperitoneal anesthesia mouse;
(2) Tropicamide and Phenylephrine eyedrop eyes mydriasis, preoperative double ocellus table anaesthetic keep eye with methylcellulose in art
Table is wet;
(3) the 1 μ L (mmu-miR-382-5p of injection drug of 1nmol/ μ L is drawn with 33G syringe (Hamilton company)
Agomir or NC agomir is purchased from Rui Bo biotech firm), 1mm avoids doing notch at blood vessel after corneoscleral junction, and needle point is vertical
Into towards vitreous chamber center.It slowly injects after syringe needle enters vitreous chamber, let the acupuncture needle remain at a certain point after pushing pin 0.5-1min, goes out rapidly
Needle.
Mouse is spaced after injecting for the first time goes identical injection for 2 weeks again, and second of injection took out eyeball of mouse after 2 weeks, respectively
It is observed and is compared by expression of the immunofluorescence dyeing to retinal specific albumen ZO-1, seen by transmission electron microscope
Examine retina microstructure.The specific operation method is as follows:
(1) immunofluorescence dyeing: taking out eyeball of mouse, removes prosthomere and is fixed on 4%PFA, isolated RPE choroid
Tissue, immunofluorescence dyeing are observed and are compared, concrete operation method to the expression of retinal specific albumen ZO-1
Referring to embodiment 3;
(2) transmission electron microscope observing retina microstructure: eyeball of mouse is taken out, 2.5% glutaraldehyde is fixed on.It is de- through ethyl alcohol
Water, embedding, solidification, ultramicrotome 70nm slice, the double dyeing of 3% acetic acid uranium-lead citrate, transmission electron microscope observing retina are aobvious
Micro-structure.
Experimental result:
By Figure 16 with Figure 17 as it can be seen that cell connects specific marker in immunofluorescence dyeing result prompt mouse RPE tissue
The expression quantity of albumen ZO-1 and β-catenin significantly reduce in mmu-miR-382-5p overexpression group compared with control group.Transmission electricity
The RPE cell of mirror result prompt mmu-miR-382-5p overexpression group mouse is significantly thickened compared with control group, RPE substrate folding part,
Microvillus and photosensory cell acromere dish structure disorder (Figure 18).Our result indicate that mmu-miR-382-5p can be in mouse
The expression for inhibiting RPE cell function related proteins, causes the abnormal change of RPE and photosensory cell, has further prompted its right
RPE cell and the latent lesion effect in the retinal degenerative disease course of disease.
Sequence table
<110>Jiangsu Prov. People's Hospital (No.1 Attached Hospital, Nanjing Medical Univ)
<120>application of the hsa-miR-382-5p in the kit of preparation diagnosis retinal degenerative disease
<160> 5
<170> SIPOSequenceListing 1.0
<210> 1
<211> 50
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 1
gtcgtatcca gtgcagggtc cgaggtattc gcactggata cgaccgaatc 50
<210> 2
<211> 20
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 2
gcgcgaagtt gttcgtggtg 20
<210> 3
<211> 16
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 3
gtgcagggtc cgaggt 16
<210> 4
<211> 22
<212> RNA
<213>mankind (Homo sapiens)
<400> 4
gaaguuguuc gugguggauu cg 22
<210> 5
<211> 22
<212> RNA
<213>mankind (Homo sapiens)
<400> 5
gaaguuguuc gugguggauu cg 22
Claims (10)
1.hsa-miR-382-5p as application of the biomarker in the kit of preparation diagnosis retinal degenerative disease,
It is characterized in that the hsa-miR-382-5p sequence as shown in SEQ ID NO.4.
2. a kind of reagent for detecting hsa-miR-382-5p expression quantity is in the kit of preparation diagnosis retinal degenerative disease
Using.
3. application according to claim 2, it is characterised in that the reagent of the detection hsa-miR-382-5p expression quantity
To have probe, genetic chip or the real-time quantitative PCR primer of detection specificity to hsa-miR-382-5p.
4. application according to claim 3, it is characterised in that described that there is detection specificity to hsa-miR-382-5p
Probe sequence as shown in SEQ ID NO.1.
5. application according to claim 3, it is characterised in that described that there is detection specificity to hsa-miR-382-5p
Real-time quantitative PCR primer as shown in SEQ ID NO.2 and SEQ ID NO.3.
6. a kind of diagnostic kit of retinal degenerative disease, it is characterised in that include detection hsa-miR-382-5p expression quantity
Reagent.
7. diagnostic kit according to claim 6, it is characterised in that the kit includes to hsa-miR-382-
Probe of the 5p with detection specificity or the real-time quantitative PCR primer to hsa-miR-382-5p with detection specificity.
8. diagnostic kit according to claim 6, it is characterised in that described that there is detection to hsa-miR-382-5p
The probe sequence of specificity is as shown in SEQ ID NO.1;Described has the real-time of detection specificity to hsa-miR-382-5p
Quantification PCR primer is as shown in SEQ ID NO.2 and SEQ ID NO.3.
9. inhibiting application of the substance of hsa-miR-382-5p expression quantity in the drug of preparation treatment retinal degenerative disease.
10.hsa-miR-382-5p as application of the drug target in the drug of screening treatment retinal degenerative disease.
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Citations (4)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN103421905A (en) * | 2013-08-20 | 2013-12-04 | 张飚 | Method of detecting microRNAs used for diagnosing cerebral stroke from blood |
US20140308674A1 (en) * | 2011-10-27 | 2014-10-16 | University Of Louisville Research Foundation, Inc. | Characterizing Melanoma |
CN107099589A (en) * | 2017-04-28 | 2017-08-29 | 赵晨 | LncRNA ZNF503 AS1 prepare the application in the kit of diagnosis retinal degenerative disease |
CN107109470A (en) * | 2014-08-07 | 2017-08-29 | 新加坡科技研究局 | MiRNA biomarker for diagnosis of gastric cancer |
-
2019
- 2019-04-12 CN CN201910293864.XA patent/CN110066870B/en active Active
Patent Citations (4)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US20140308674A1 (en) * | 2011-10-27 | 2014-10-16 | University Of Louisville Research Foundation, Inc. | Characterizing Melanoma |
CN103421905A (en) * | 2013-08-20 | 2013-12-04 | 张飚 | Method of detecting microRNAs used for diagnosing cerebral stroke from blood |
CN107109470A (en) * | 2014-08-07 | 2017-08-29 | 新加坡科技研究局 | MiRNA biomarker for diagnosis of gastric cancer |
CN107099589A (en) * | 2017-04-28 | 2017-08-29 | 赵晨 | LncRNA ZNF503 AS1 prepare the application in the kit of diagnosis retinal degenerative disease |
Non-Patent Citations (3)
Title |
---|
CHAO JIANG: "c-jun-mediated microRNA-302d-3p induces RPE dedifferentiation by targeting p21Wafer/Cip1", 《CELL DEATH & DISEASE》 * |
YAOMING LIU等: "microRNA profiling in Glaucoma eyes with varying degrees of optic neuropathy by using next-generation sequencing", 《INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE》 * |
刘冬冬等: "miR-382-5p通过靶基因PTEN阻滞NB4细胞分化", 《中国细胞生物学学报》 * |
Cited By (1)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN111926072A (en) * | 2020-08-14 | 2020-11-13 | 蒋沁 | Annular RNA marker for diagnosing vascular disease of eye fundus, diagnostic kit and application |
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