CN100572556C - 来自拓扑异构酶基因区域的核酸探针和广范围引物,以及使用它们的方法 - Google Patents

来自拓扑异构酶基因区域的核酸探针和广范围引物,以及使用它们的方法 Download PDF

Info

Publication number
CN100572556C
CN100572556C CNB2003801084108A CN200380108410A CN100572556C CN 100572556 C CN100572556 C CN 100572556C CN B2003801084108 A CNB2003801084108 A CN B2003801084108A CN 200380108410 A CN200380108410 A CN 200380108410A CN 100572556 C CN100572556 C CN 100572556C
Authority
CN
China
Prior art keywords
dna
sequence
infection
primer
bacterial species
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Expired - Lifetime
Application number
CNB2003801084108A
Other languages
English (en)
Chinese (zh)
Other versions
CN1735694A (zh
Inventor
斯蒂纳·罗特
雅里·雅拉瓦
西莫·尼卡里
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Mobidiag Oy
Original Assignee
Mobidiag Oy
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Mobidiag Oy filed Critical Mobidiag Oy
Publication of CN1735694A publication Critical patent/CN1735694A/zh
Application granted granted Critical
Publication of CN100572556C publication Critical patent/CN100572556C/zh
Anticipated expiration legal-status Critical
Expired - Lifetime legal-status Critical Current

Links

Images

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6888Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
    • C12Q1/689Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for bacteria

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Analytical Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Organic Chemistry (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Physics & Mathematics (AREA)
  • Biochemistry (AREA)
  • Immunology (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Acyclic And Carbocyclic Compounds In Medicinal Compositions (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
CNB2003801084108A 2002-11-19 2003-11-19 来自拓扑异构酶基因区域的核酸探针和广范围引物,以及使用它们的方法 Expired - Lifetime CN100572556C (zh)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
FI20022064A FI113549B (fi) 2002-11-19 2002-11-19 Diagnostinen menetelmä hengitystieinfektioita aiheuttavien bakteerien osoittamiseksi ja tunnistamiseksi ja menetelmässä käyttökelpoinen alukeseos
FI20022064 2002-11-19

Publications (2)

Publication Number Publication Date
CN1735694A CN1735694A (zh) 2006-02-15
CN100572556C true CN100572556C (zh) 2009-12-23

Family

ID=8564969

Family Applications (1)

Application Number Title Priority Date Filing Date
CNB2003801084108A Expired - Lifetime CN100572556C (zh) 2002-11-19 2003-11-19 来自拓扑异构酶基因区域的核酸探针和广范围引物,以及使用它们的方法

Country Status (14)

Country Link
US (1) US20060024675A1 (https=)
EP (1) EP1565573B1 (https=)
JP (1) JP2006509500A (https=)
CN (1) CN100572556C (https=)
AT (1) ATE357539T1 (https=)
AU (1) AU2003283446A1 (https=)
CA (1) CA2506058A1 (https=)
DE (1) DE60312726T2 (https=)
DK (1) DK1565573T3 (https=)
ES (1) ES2285211T3 (https=)
FI (1) FI113549B (https=)
PT (1) PT1565573E (https=)
SI (1) SI1565573T1 (https=)
WO (1) WO2004046379A1 (https=)

Families Citing this family (10)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2006137939A2 (en) 2004-11-09 2006-12-28 Gen-Probe Incorporated Compositions and methods for detecting group a streptococci
AT503401B1 (de) 2006-04-10 2007-12-15 Arc Austrian Res Centers Gmbh Microarray zur erkennung von pathogenen
EP1975253A1 (en) * 2007-03-30 2008-10-01 Institut Pasteur Method of discrimination of the species of the enterobacteriaceae family by genotyping and its applications
JP5403573B2 (ja) * 2007-08-09 2014-01-29 国立大学法人山口大学 肺炎原因菌検出用プライマーセット
FI121428B (fi) * 2008-01-17 2010-11-15 Mobidiag Oy Laajakirjoisia alukkeita, testipakkaus ja menetelmä bakteerilajien havaitsemiseksi ja tunnistamiseksi
FI121884B (fi) * 2008-01-17 2011-05-31 Mobidiag Oy Menetelmä metisilliiniresistenttien stafylokokkien havaitsemiseksi ja tunnistamiseksi sekä menetelmään tarkoitettu koetin ja testipakkaus
FI121379B (fi) * 2008-01-17 2010-10-29 Mobidiag Oy Menetelmä yksijuosteisen DNA:n tuottamiseksi kaksivaiheisella symmetrisellä PCR:llä sekä menetelmään tarkoitettu reagenssipakkaus
CN101492731B (zh) * 2008-12-04 2011-05-11 浙江理工大学 一种胶质芽孢杆菌的快速pcr检测方法
GB0901709D0 (en) * 2009-02-03 2009-03-11 Q Chip Ltd Assay products, devices and method
JP2013528049A (ja) * 2010-05-19 2013-07-08 キアゲン ガイサーズバーグ アイエヌシー. 核酸の配列特異的な精製及び多重分析のための方法及び組成物

Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5645994A (en) * 1990-07-05 1997-07-08 University Of Utah Research Foundation Method and compositions for identification of species in a sample using type II topoisomerase sequences
EP0935003A2 (en) * 1997-12-12 1999-08-11 Marine Biotechnology Institute Co., Ltd. Method for identification and detection of microorganisms using gyrase gene as an indicator
WO2001036683A2 (en) * 1999-11-16 2001-05-25 Apollo Biotechnology, Inc. Method for rapid and accurate identification of microorganisms

Family Cites Families (12)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5541308A (en) * 1986-11-24 1996-07-30 Gen-Probe Incorporated Nucleic acid probes for detection and/or quantitation of non-viral organisms
US5210015A (en) * 1990-08-06 1993-05-11 Hoffman-La Roche Inc. Homogeneous assay system using the nuclease activity of a nucleic acid polymerase
JPH09252783A (ja) * 1996-03-26 1997-09-30 Nippon Suisan Kaisha Ltd 腸炎ビブリオ検出のためのヌクレオチドおよびそれを用いた検出法
US6087104A (en) * 1997-03-24 2000-07-11 Nippon Suisan Kaisha, Ltd. Oligonucleotides for detection of Bacillus cereus group bacteria harmful to mammals, and method of detection with the oligonucleotides
EP1068355A2 (en) * 1998-04-01 2001-01-17 THE GOVERNMENT OF THE UNITED STATES OF AMERICA, as represented by The Secretary, Department of Health and Human Services Oligonucleotide probes for detecting enterobacteriaceae and quinolone-resistant enterobacteriaceae
JP2000060570A (ja) * 1998-08-27 2000-02-29 Canon Inc 新規核酸断片及びこれを用いた微生物の検出方法
GB9904804D0 (en) * 1999-03-02 1999-04-28 King S College London Identification of bacteria
EP1169482A1 (de) * 1999-04-10 2002-01-09 Merlin Gesellschaft für mikrobiologische Diagnostika mbH Verfahren zur genotypischen klassifizierung
US6346397B1 (en) * 1999-04-12 2002-02-12 Smithkline Beecham Corportion GyrA
JP3565752B2 (ja) * 1999-11-02 2004-09-15 株式会社海洋バイオテクノロジー研究所 Dnaジャイレース遺伝子中に存在する特徴的な塩基配列を用いた遅発育性マイコバクテリアの同定法及び特異的検出法
JP2001245677A (ja) * 1999-12-27 2001-09-11 Srl Inc シゲラ属又はサルモネラ属細菌の測定用核酸及び検出方法
US20020072058A1 (en) * 2000-03-24 2002-06-13 Voelker Leroy L. Method for amplifying quinolone-resistance-determining-regions and identifying polymorphic variants thereof

Patent Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5645994A (en) * 1990-07-05 1997-07-08 University Of Utah Research Foundation Method and compositions for identification of species in a sample using type II topoisomerase sequences
EP0935003A2 (en) * 1997-12-12 1999-08-11 Marine Biotechnology Institute Co., Ltd. Method for identification and detection of microorganisms using gyrase gene as an indicator
WO2001036683A2 (en) * 1999-11-16 2001-05-25 Apollo Biotechnology, Inc. Method for rapid and accurate identification of microorganisms

Non-Patent Citations (1)

* Cited by examiner, † Cited by third party
Title
PCR amplification and direct sequencing of gyrB genes withUniversal primers and their application to the detection andtaxonomic analysis.. Appl. Envir. Microbio.,Vol.61 No.3. 1995 *

Also Published As

Publication number Publication date
US20060024675A1 (en) 2006-02-02
FI113549B (fi) 2004-05-14
CN1735694A (zh) 2006-02-15
JP2006509500A (ja) 2006-03-23
FI20022064A0 (fi) 2002-11-19
DK1565573T3 (da) 2007-07-30
AU2003283446A1 (en) 2004-06-15
DE60312726D1 (de) 2007-05-03
EP1565573B1 (en) 2007-03-21
WO2004046379A1 (en) 2004-06-03
ATE357539T1 (de) 2007-04-15
ES2285211T3 (es) 2007-11-16
WO2004046379A9 (en) 2004-08-26
PT1565573E (pt) 2007-04-30
CA2506058A1 (en) 2004-06-03
DE60312726T2 (de) 2008-02-14
EP1565573A1 (en) 2005-08-24
SI1565573T1 (sl) 2007-08-31

Similar Documents

Publication Publication Date Title
Barken et al. Advances in nucleic acid-based diagnostics of bacterial infections
EP0525095B2 (en) HYBRIDIZATION PROBES DERIVED FROM THE SPACER REGION BETWEEN THE 16S AND 23S rRNA GENES FOR THE DETECTION OF NON-VIRAL MICROORGANISMS
CN100572556C (zh) 来自拓扑异构酶基因区域的核酸探针和广范围引物,以及使用它们的方法
AU776981B2 (en) Identification of bacteria by amplification and probing
US10669591B2 (en) Selective detection of Haemophilus influenzae
JP2006129810A (ja) 感染症起炎菌検出用プローブセット及び担体及び遺伝子検査方法
Liu et al. Development and evaluation of 16S rDNA microarray for detecting bacterial pathogens in cerebrospinal fluid
EP1725681A2 (en) Assay for detecting and identifying micro-organisms
WO2006122049A2 (en) Pna probes for detecting mollicutes
FI115637B (fi) Diagnostinen menetelmä hengitystieinfektioita aiheuttavien bakteerien osoittamiseksi ja tunnistamiseksi ja menetelmässä käyttökelpoinen alukeseos
JP5094181B2 (ja) プローブセット、プローブ固定担体及び検査方法
EP1713918A1 (en) Oligonucleotide for genotyping of mycoplasma, microarray comprising the oligonucleotide, and method for detection of species using the microarray
ES2711509T3 (es) Detección de Streptococcus pneumoniae
JP5089222B2 (ja) プローブセット、プローブ固定担体及び検査方法
JP5116341B2 (ja) プローブセット、プローブ固定担体及び検査方法
JP5089220B2 (ja) プローブセット、プローブ固定担体及び検査方法
JP5089223B2 (ja) プローブセット、プローブ固定担体及び検査方法
JP2007289171A (ja) プローブ、プローブセット、プローブ固定担体及び検査方法

Legal Events

Date Code Title Description
C06 Publication
PB01 Publication
C10 Entry into substantive examination
SE01 Entry into force of request for substantive examination
C14 Grant of patent or utility model
GR01 Patent grant
CX01 Expiry of patent term

Granted publication date: 20091223

CX01 Expiry of patent term