CA2962254A1 - Composition et procede de traitement de l'adn - Google Patents

Composition et procede de traitement de l'adn Download PDF

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Publication number
CA2962254A1
CA2962254A1 CA2962254A CA2962254A CA2962254A1 CA 2962254 A1 CA2962254 A1 CA 2962254A1 CA 2962254 A CA2962254 A CA 2962254A CA 2962254 A CA2962254 A CA 2962254A CA 2962254 A1 CA2962254 A1 CA 2962254A1
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Canada
Prior art keywords
dna
enzyme
trigger
uracil
duplex
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CA2962254A
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English (en)
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CA2962254C (fr
Inventor
Rebecca F. Mcclure
Tyler P. Kirwan
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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12PFERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
    • C12P19/00Preparation of compounds containing saccharide radicals
    • C12P19/26Preparation of nitrogen-containing carbohydrates
    • C12P19/28N-glycosides
    • C12P19/30Nucleotides
    • C12P19/34Polynucleotides, e.g. nucleic acids, oligoribonucleotides
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6806Preparing nucleic acids for analysis, e.g. for polymerase chain reaction [PCR] assay
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869Methods for sequencing
    • C12Q1/6874Methods for sequencing involving nucleic acid arrays, e.g. sequencing by hybridisation

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  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Health & Medical Sciences (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Engineering & Computer Science (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Molecular Biology (AREA)
  • Biochemistry (AREA)
  • Genetics & Genomics (AREA)
  • Microbiology (AREA)
  • Biotechnology (AREA)
  • General Health & Medical Sciences (AREA)
  • Analytical Chemistry (AREA)
  • General Engineering & Computer Science (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Physics & Mathematics (AREA)
  • Biophysics (AREA)
  • Immunology (AREA)
  • General Chemical & Material Sciences (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)

Abstract

A method of cleaving DNA molecules into smaller fragments by the creation of "cleavage trigger sites" followed by enzymatic processing. ln some embodiments the "cleavage trigger sites" are created by the incorporation of nucleotides having uracil bases into a DNA molecule and processing with uracil DNA glycosylase, endonuclease IV and T7 endonuclease I.
CA2962254A 2016-04-07 2017-03-24 Composition et procede de traitement de l'adn Active CA2962254C (fr)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US15/092,917 2016-04-07
US15/092,917 US10160987B2 (en) 2016-04-07 2016-04-07 Composition and method for processing DNA

Publications (2)

Publication Number Publication Date
CA2962254A1 true CA2962254A1 (fr) 2017-10-07
CA2962254C CA2962254C (fr) 2020-07-28

Family

ID=59997561

Family Applications (1)

Application Number Title Priority Date Filing Date
CA2962254A Active CA2962254C (fr) 2016-04-07 2017-03-24 Composition et procede de traitement de l'adn

Country Status (2)

Country Link
US (1) US10160987B2 (fr)
CA (1) CA2962254C (fr)

Families Citing this family (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN109666745B (zh) * 2019-02-15 2024-04-05 阅尔基因技术(苏州)有限公司 染色体1p/19q联合杂合性缺失的检测方法及试剂盒

Family Cites Families (23)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5035996A (en) 1989-06-01 1991-07-30 Life Technologies, Inc. Process for controlling contamination of nucleic acid amplification reactions
US5229283A (en) 1991-06-14 1993-07-20 Life Technologies, Inc. Use of exo-sample nucleotides in gene cloning
US6190865B1 (en) * 1995-09-27 2001-02-20 Epicentre Technologies Corporation Method for characterizing nucleic acid molecules
US6197557B1 (en) 1997-03-05 2001-03-06 The Regents Of The University Of Michigan Compositions and methods for analysis of nucleic acids
US6090553A (en) 1997-10-29 2000-07-18 Beckman Coulter, Inc. Use of uracil-DNA glycosylase in genetic analysis
US6046039A (en) 1998-08-19 2000-04-04 Battelle Memorial Institute Methods for producing partially digested restriction DNA fragments and for producing a partially modified PCR product
IE20000887A1 (en) 2000-11-03 2002-12-11 Univ College Cork Nat Univ Ie Method for the amplification and optional characterisation of nucleic acids
US20040086890A1 (en) * 2002-10-25 2004-05-06 Stratagene DNA polymerases with reduced base analog detection activity
US7851192B2 (en) 2004-11-22 2010-12-14 New England Biolabs, Inc. Modified DNA cleavage enzymes and methods for use
US20060063189A1 (en) 2004-09-21 2006-03-23 Applera Corporation Applied Biosystems Group Methods of using sulfur nucleophiles as improved alternatives to sodium bisulfite for methylated DNA analysis
US7658288B2 (en) 2004-11-08 2010-02-09 Applied Biosystems, Llc Bisulfite conversion reagent
CA2596496A1 (fr) 2005-02-01 2006-08-10 Agencourt Bioscience Corp. Reactifs, methodes et bibliotheques pour sequencage fonde sur des billes
JP5033806B2 (ja) 2005-10-20 2012-09-26 ニユー・イングランド・バイオレイブス・インコーポレイテツド 改良された増幅のための核酸の修復
US7754429B2 (en) 2006-10-06 2010-07-13 Illumina Cambridge Limited Method for pair-wise sequencing a plurity of target polynucleotides
US8592150B2 (en) 2007-12-05 2013-11-26 Complete Genomics, Inc. Methods and compositions for long fragment read sequencing
US8058414B2 (en) 2008-04-29 2011-11-15 Life Technologies Corporation Unnatural polymerase substrates that can sustain enzymatic synthesis of double stranded nucleic acids from a nucleic acid template and methods of use
EP2393940B1 (fr) 2009-02-03 2014-12-17 New England Biolabs, Inc. Génération de ruptures aléatoires double brin dans de l'adn à l'aide d'enzymes
WO2010111674A2 (fr) 2009-03-27 2010-09-30 Life Technologies Corporation Procédés et appareil de séquençage de molécules uniques utilisant la détection par transfert d'énergie
DK3037536T3 (da) 2011-01-28 2020-01-13 Illumina Inc Oligonukleotiderstatning for di-taggede og retnings biblioteker
WO2013040008A1 (fr) 2011-09-12 2013-03-21 University Of Notre Dame Du Lac Systèmes et procédés permettant de détecter des nucléotides sans utiliser de billes
US9957558B2 (en) 2011-04-28 2018-05-01 Life Technologies Corporation Methods and compositions for multiplex PCR
WO2014105246A2 (fr) 2012-10-05 2014-07-03 Massachusetts Institute Of Technology Système de tri nano-fluidique pour la synthèse de gène et produits de réaction de pcr
TW201531569A (zh) * 2014-02-12 2015-08-16 Taiwan Sugar Corp 雙股核酸分子與s1核酸酶於檢測核酸修復酵素活性的用途

Also Published As

Publication number Publication date
CA2962254C (fr) 2020-07-28
US20170292137A1 (en) 2017-10-12
US10160987B2 (en) 2018-12-25

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