CA2036139C - Microbiological oxidation of methyl groups in heterocycles - Google Patents
Microbiological oxidation of methyl groups in heterocycles Download PDFInfo
- Publication number
- CA2036139C CA2036139C CA002036139A CA2036139A CA2036139C CA 2036139 C CA2036139 C CA 2036139C CA 002036139 A CA002036139 A CA 002036139A CA 2036139 A CA2036139 A CA 2036139A CA 2036139 C CA2036139 C CA 2036139C
- Authority
- CA
- Canada
- Prior art keywords
- methylated
- reaction
- substrate
- heterocycle
- methyl
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Expired - Lifetime
Links
- 125000000623 heterocyclic group Chemical group 0.000 title claims abstract description 27
- 125000002496 methyl group Chemical group [H]C([H])([H])* 0.000 title claims abstract description 19
- 230000003647 oxidation Effects 0.000 title claims abstract description 13
- 238000007254 oxidation reaction Methods 0.000 title claims abstract description 13
- 230000002906 microbiologic effect Effects 0.000 title claims abstract description 10
- 238000006243 chemical reaction Methods 0.000 claims abstract description 36
- 108090000790 Enzymes Proteins 0.000 claims abstract description 35
- 102000004190 Enzymes Human genes 0.000 claims abstract description 35
- 239000000758 substrate Substances 0.000 claims abstract description 35
- 238000000034 method Methods 0.000 claims abstract description 34
- 230000008569 process Effects 0.000 claims abstract description 32
- YXFVVABEGXRONW-UHFFFAOYSA-N Toluene Chemical compound CC1=CC=CC=C1 YXFVVABEGXRONW-UHFFFAOYSA-N 0.000 claims abstract description 30
- 244000005700 microbiome Species 0.000 claims abstract description 23
- HFPZCAJZSCWRBC-UHFFFAOYSA-N p-cymene Chemical compound CC(C)C1=CC=C(C)C=C1 HFPZCAJZSCWRBC-UHFFFAOYSA-N 0.000 claims abstract description 12
- 125000003118 aryl group Chemical group 0.000 claims abstract description 11
- 239000008096 xylene Substances 0.000 claims abstract description 9
- CTQNGGLPUBDAKN-UHFFFAOYSA-N O-Xylene Chemical compound CC1=CC=CC=C1C CTQNGGLPUBDAKN-UHFFFAOYSA-N 0.000 claims abstract description 8
- 241000589516 Pseudomonas Species 0.000 claims abstract description 8
- 229930007927 cymene Natural products 0.000 claims abstract description 6
- 239000000411 inducer Substances 0.000 claims description 26
- 241000589776 Pseudomonas putida Species 0.000 claims description 12
- 229910052799 carbon Inorganic materials 0.000 claims description 12
- 150000001875 compounds Chemical class 0.000 claims description 9
- OKTJSMMVPCPJKN-UHFFFAOYSA-N Carbon Chemical compound [C] OKTJSMMVPCPJKN-UHFFFAOYSA-N 0.000 claims description 8
- 230000006698 induction Effects 0.000 claims description 8
- 239000001963 growth medium Substances 0.000 claims description 7
- IJGRMHOSHXDMSA-UHFFFAOYSA-N Atomic nitrogen Chemical group N#N IJGRMHOSHXDMSA-UHFFFAOYSA-N 0.000 claims description 4
- 230000033228 biological regulation Effects 0.000 claims description 4
- 150000001721 carbon Chemical group 0.000 claims description 4
- 150000001732 carboxylic acid derivatives Chemical class 0.000 claims description 4
- 125000005842 heteroatom Chemical group 0.000 claims description 4
- 230000001105 regulatory effect Effects 0.000 claims description 4
- 150000002240 furans Chemical class 0.000 claims description 3
- 150000003216 pyrazines Chemical class 0.000 claims description 3
- 150000003222 pyridines Chemical class 0.000 claims description 3
- 150000003230 pyrimidines Chemical class 0.000 claims description 3
- 150000003233 pyrroles Chemical class 0.000 claims description 3
- 150000003557 thiazoles Chemical class 0.000 claims description 3
- 150000003577 thiophenes Chemical class 0.000 claims description 3
- NINIDFKCEFEMDL-UHFFFAOYSA-N Sulfur Chemical group [S] NINIDFKCEFEMDL-UHFFFAOYSA-N 0.000 claims description 2
- 150000002460 imidazoles Chemical class 0.000 claims description 2
- 229910052757 nitrogen Inorganic materials 0.000 claims description 2
- 125000004433 nitrogen atom Chemical group N* 0.000 claims description 2
- 229910052760 oxygen Inorganic materials 0.000 claims description 2
- 239000001301 oxygen Substances 0.000 claims description 2
- 150000003217 pyrazoles Chemical class 0.000 claims description 2
- 150000004892 pyridazines Chemical class 0.000 claims description 2
- 229910052717 sulfur Chemical group 0.000 claims description 2
- 239000011593 sulfur Chemical group 0.000 claims description 2
- QVGXLLKOCUKJST-UHFFFAOYSA-N atomic oxygen Chemical group [O] QVGXLLKOCUKJST-UHFFFAOYSA-N 0.000 claims 1
- 150000001735 carboxylic acids Chemical class 0.000 abstract description 3
- 125000004432 carbon atom Chemical group C* 0.000 abstract description 2
- ITQTTZVARXURQS-UHFFFAOYSA-N 3-methylpyridine Chemical compound CC1=CC=CN=C1 ITQTTZVARXURQS-UHFFFAOYSA-N 0.000 description 18
- LCZUOKDVTBMCMX-UHFFFAOYSA-N 2,5-Dimethylpyrazine Chemical compound CC1=CN=C(C)C=N1 LCZUOKDVTBMCMX-UHFFFAOYSA-N 0.000 description 14
- URLKBWYHVLBVBO-UHFFFAOYSA-N Para-Xylene Chemical group CC1=CC=C(C)C=C1 URLKBWYHVLBVBO-UHFFFAOYSA-N 0.000 description 14
- SIOXPEMLGUPBBT-UHFFFAOYSA-N picolinic acid Chemical compound OC(=O)C1=CC=CC=N1 SIOXPEMLGUPBBT-UHFFFAOYSA-N 0.000 description 12
- PVNIIMVLHYAWGP-UHFFFAOYSA-N Niacin Chemical compound OC(=O)C1=CC=CN=C1 PVNIIMVLHYAWGP-UHFFFAOYSA-N 0.000 description 10
- SNRUBQQJIBEYMU-UHFFFAOYSA-N dodecane Chemical compound CCCCCCCCCCCC SNRUBQQJIBEYMU-UHFFFAOYSA-N 0.000 description 10
- 239000000203 mixture Substances 0.000 description 9
- 238000004519 manufacturing process Methods 0.000 description 8
- 239000001934 2,5-dimethylpyrazine Substances 0.000 description 7
- 239000002253 acid Substances 0.000 description 7
- 241000187654 Nocardia Species 0.000 description 6
- KWYUFKZDYYNOTN-UHFFFAOYSA-M Potassium hydroxide Chemical compound [OH-].[K+] KWYUFKZDYYNOTN-UHFFFAOYSA-M 0.000 description 6
- 230000036983 biotransformation Effects 0.000 description 6
- IVSZLXZYQVIEFR-UHFFFAOYSA-N m-xylene Chemical group CC1=CC=CC(C)=C1 IVSZLXZYQVIEFR-UHFFFAOYSA-N 0.000 description 6
- 239000007003 mineral medium Substances 0.000 description 6
- 230000003287 optical effect Effects 0.000 description 6
- RBYJWCRKFLGNDB-UHFFFAOYSA-N 5-methylpyrazine-2-carboxylic acid Chemical compound CC1=CN=C(C(O)=O)C=N1 RBYJWCRKFLGNDB-UHFFFAOYSA-N 0.000 description 5
- QGZKDVFQNNGYKY-UHFFFAOYSA-N Ammonia Chemical compound N QGZKDVFQNNGYKY-UHFFFAOYSA-N 0.000 description 5
- 239000002609 medium Substances 0.000 description 5
- 229960003512 nicotinic acid Drugs 0.000 description 5
- 235000001968 nicotinic acid Nutrition 0.000 description 5
- 239000011664 nicotinic acid Substances 0.000 description 5
- XCYJPXQACVEIOS-UHFFFAOYSA-N 1-isopropyl-3-methylbenzene Chemical compound CC(C)C1=CC=CC(C)=C1 XCYJPXQACVEIOS-UHFFFAOYSA-N 0.000 description 4
- BSKHPKMHTQYZBB-UHFFFAOYSA-N 2-methylpyridine Chemical compound CC1=CC=CC=N1 BSKHPKMHTQYZBB-UHFFFAOYSA-N 0.000 description 4
- KYQCOXFCLRTKLS-UHFFFAOYSA-N Pyrazine Chemical compound C1=CN=CC=N1 KYQCOXFCLRTKLS-UHFFFAOYSA-N 0.000 description 4
- JUJWROOIHBZHMG-UHFFFAOYSA-N Pyridine Chemical compound C1=CC=NC=C1 JUJWROOIHBZHMG-UHFFFAOYSA-N 0.000 description 4
- 150000001335 aliphatic alkanes Chemical class 0.000 description 4
- 150000004945 aromatic hydrocarbons Chemical class 0.000 description 4
- 239000006285 cell suspension Substances 0.000 description 4
- -1 heterocyclic carboxylic acids Chemical class 0.000 description 4
- WVDDGKGOMKODPV-UHFFFAOYSA-N Benzyl alcohol Chemical compound OCC1=CC=CC=C1 WVDDGKGOMKODPV-UHFFFAOYSA-N 0.000 description 3
- MWJISHHTECKVPV-UHFFFAOYSA-N C1=CN=CC=N1.OC(=O)C1=CN=CC=N1 Chemical compound C1=CN=CC=N1.OC(=O)C1=CN=CC=N1 MWJISHHTECKVPV-UHFFFAOYSA-N 0.000 description 3
- QENGPZGAWFQWCZ-UHFFFAOYSA-N Methylthiophene Natural products CC=1C=CSC=1 QENGPZGAWFQWCZ-UHFFFAOYSA-N 0.000 description 3
- 150000007513 acids Chemical class 0.000 description 3
- 238000011534 incubation Methods 0.000 description 3
- 239000013067 intermediate product Substances 0.000 description 3
- CAWHJQAVHZEVTJ-UHFFFAOYSA-N methylpyrazine Chemical compound CC1=CN=CC=N1 CAWHJQAVHZEVTJ-UHFFFAOYSA-N 0.000 description 3
- NIPZZXUFJPQHNH-UHFFFAOYSA-N pyrazine-2-carboxylic acid Chemical compound OC(=O)C1=CN=CC=N1 NIPZZXUFJPQHNH-UHFFFAOYSA-N 0.000 description 3
- JOSDQWPRIVOTIM-UHFFFAOYSA-N pyridine;pyridine-2-carboxylic acid Chemical compound C1=CC=NC=C1.OC(=O)C1=CC=CC=N1 JOSDQWPRIVOTIM-UHFFFAOYSA-N 0.000 description 3
- QERYCTSHXKAMIS-UHFFFAOYSA-N thiophene-2-carboxylic acid Chemical compound OC(=O)C1=CC=CS1 QERYCTSHXKAMIS-UHFFFAOYSA-N 0.000 description 3
- JBEBGTMCZIGUTK-TZFCGSKZSA-N (2Z,4E)-2-hydroxymuconic acid Chemical compound OC(=O)\C=C\C=C(/O)C(O)=O JBEBGTMCZIGUTK-TZFCGSKZSA-N 0.000 description 2
- IJVLVRYLIMQVDD-UHFFFAOYSA-N 1,3-thiazole-2-carboxylic acid Chemical compound OC(=O)C1=NC=CS1 IJVLVRYLIMQVDD-UHFFFAOYSA-N 0.000 description 2
- OXQOBQJCDNLAPO-UHFFFAOYSA-N 2,3-Dimethylpyrazine Chemical compound CC1=NC=CN=C1C OXQOBQJCDNLAPO-UHFFFAOYSA-N 0.000 description 2
- JYYNAJVZFGKDEQ-UHFFFAOYSA-N 2,4-Dimethylpyridine Chemical compound CC1=CC=NC(C)=C1 JYYNAJVZFGKDEQ-UHFFFAOYSA-N 0.000 description 2
- PAPNRQCYSFBWDI-UHFFFAOYSA-N 2,5-Dimethyl-1H-pyrrole Chemical compound CC1=CC=C(C)N1 PAPNRQCYSFBWDI-UHFFFAOYSA-N 0.000 description 2
- GWQOOADXMVQEFT-UHFFFAOYSA-N 2,5-Dimethylthiophene Chemical compound CC1=CC=C(C)S1 GWQOOADXMVQEFT-UHFFFAOYSA-N 0.000 description 2
- GSNUFIFRDBKVIE-UHFFFAOYSA-N 2,5-dimethylfuran Chemical compound CC1=CC=C(C)O1 GSNUFIFRDBKVIE-UHFFFAOYSA-N 0.000 description 2
- XWKFPIODWVPXLX-UHFFFAOYSA-N 2,5-dimethylpyridine Chemical compound CC1=CC=C(C)N=C1 XWKFPIODWVPXLX-UHFFFAOYSA-N 0.000 description 2
- FKNQCJSGGFJEIZ-UHFFFAOYSA-N 4-methylpyridine Chemical compound CC1=CC=NC=C1 FKNQCJSGGFJEIZ-UHFFFAOYSA-N 0.000 description 2
- QMHIMXFNBOYPND-UHFFFAOYSA-N 4-methylthiazole Chemical compound CC1=CSC=N1 QMHIMXFNBOYPND-UHFFFAOYSA-N 0.000 description 2
- 241000192125 Firmicutes Species 0.000 description 2
- TWRXJAOTZQYOKJ-UHFFFAOYSA-L Magnesium chloride Chemical compound [Mg+2].[Cl-].[Cl-] TWRXJAOTZQYOKJ-UHFFFAOYSA-L 0.000 description 2
- DFPAKSUCGFBDDF-UHFFFAOYSA-N Nicotinamide Chemical compound NC(=O)C1=CC=CN=C1 DFPAKSUCGFBDDF-UHFFFAOYSA-N 0.000 description 2
- PCNDJXKNXGMECE-UHFFFAOYSA-N Phenazine Natural products C1=CC=CC2=NC3=CC=CC=C3N=C21 PCNDJXKNXGMECE-UHFFFAOYSA-N 0.000 description 2
- 150000001447 alkali salts Chemical class 0.000 description 2
- 229910021529 ammonia Inorganic materials 0.000 description 2
- WPYMKLBDIGXBTP-UHFFFAOYSA-N benzoic acid Chemical compound OC(=O)C1=CC=CC=C1 WPYMKLBDIGXBTP-UHFFFAOYSA-N 0.000 description 2
- 235000019445 benzyl alcohol Nutrition 0.000 description 2
- 230000015556 catabolic process Effects 0.000 description 2
- 238000006731 degradation reaction Methods 0.000 description 2
- 239000007789 gas Substances 0.000 description 2
- 239000004615 ingredient Substances 0.000 description 2
- 235000015097 nutrients Nutrition 0.000 description 2
- 229940081066 picolinic acid Drugs 0.000 description 2
- 239000013612 plasmid Substances 0.000 description 2
- 239000000047 product Substances 0.000 description 2
- XMPIGGYVKLTGMG-UHFFFAOYSA-N pyrazine toluene Chemical compound C1=CN=CC=N1.CC1=CC=CC=C1 XMPIGGYVKLTGMG-UHFFFAOYSA-N 0.000 description 2
- IPEHBUMCGVEMRF-UHFFFAOYSA-N pyrazinecarboxamide Chemical compound NC(=O)C1=CN=CC=N1 IPEHBUMCGVEMRF-UHFFFAOYSA-N 0.000 description 2
- 239000011573 trace mineral Substances 0.000 description 2
- 235000013619 trace mineral Nutrition 0.000 description 2
- IAEGWXHKWJGQAZ-UHFFFAOYSA-N trimethylpyrazine Chemical compound CC1=CN=C(C)C(C)=N1 IAEGWXHKWJGQAZ-UHFFFAOYSA-N 0.000 description 2
- HMVYYTRDXNKRBQ-UHFFFAOYSA-N 1,3-thiazole-4-carboxylic acid Chemical compound OC(=O)C1=CSC=N1 HMVYYTRDXNKRBQ-UHFFFAOYSA-N 0.000 description 1
- QSSXJPIWXQTSIX-UHFFFAOYSA-N 1-bromo-2-methylbenzene Chemical compound CC1=CC=CC=C1Br QSSXJPIWXQTSIX-UHFFFAOYSA-N 0.000 description 1
- IBSQPLPBRSHTTG-UHFFFAOYSA-N 1-chloro-2-methylbenzene Chemical compound CC1=CC=CC=C1Cl IBSQPLPBRSHTTG-UHFFFAOYSA-N 0.000 description 1
- XEPZHZYXIMLNGG-UHFFFAOYSA-N 1h-pyrrole;1h-pyrrole-2-carboxylic acid Chemical compound C=1C=CNC=1.OC(=O)C1=CC=CN1 XEPZHZYXIMLNGG-UHFFFAOYSA-N 0.000 description 1
- YTQQIHUQLOZOJI-UHFFFAOYSA-N 2,3-dihydro-1,2-thiazole Chemical compound C1NSC=C1 YTQQIHUQLOZOJI-UHFFFAOYSA-N 0.000 description 1
- YVYJOAKJQRTIDH-UHFFFAOYSA-N 2-chloro-3-ethyl-6-methylpyridine Chemical compound CCC1=CC=C(C)N=C1Cl YVYJOAKJQRTIDH-UHFFFAOYSA-N 0.000 description 1
- VXLYOURCUVQYLN-UHFFFAOYSA-N 2-chloro-5-methylpyridine Chemical compound CC1=CC=C(Cl)N=C1 VXLYOURCUVQYLN-UHFFFAOYSA-N 0.000 description 1
- XQQBUAPQHNYYRS-UHFFFAOYSA-N 2-methylthiophene Chemical compound CC1=CC=CS1 XQQBUAPQHNYYRS-UHFFFAOYSA-N 0.000 description 1
- SDXAWLJRERMRKF-UHFFFAOYSA-N 3,5-dimethyl-1h-pyrazole Chemical compound CC=1C=C(C)NN=1 SDXAWLJRERMRKF-UHFFFAOYSA-N 0.000 description 1
- NNBALVIZMGWZHS-UHFFFAOYSA-N 3-chloro-2,5-dimethylpyrazine Chemical compound CC1=CN=C(C)C(Cl)=N1 NNBALVIZMGWZHS-UHFFFAOYSA-N 0.000 description 1
- LSBIUXKNVUBKRI-UHFFFAOYSA-N 4,6-dimethylpyrimidine Chemical compound CC1=CC(C)=NC=N1 LSBIUXKNVUBKRI-UHFFFAOYSA-N 0.000 description 1
- AVPYQKSLYISFPO-UHFFFAOYSA-N 4-chlorobenzaldehyde Chemical compound ClC1=CC=C(C=O)C=C1 AVPYQKSLYISFPO-UHFFFAOYSA-N 0.000 description 1
- RLYUNPNLXMSXAX-UHFFFAOYSA-N 5-methylthiazole Chemical compound CC1=CN=CS1 RLYUNPNLXMSXAX-UHFFFAOYSA-N 0.000 description 1
- 102000007698 Alcohol dehydrogenase Human genes 0.000 description 1
- 108010021809 Alcohol dehydrogenase Proteins 0.000 description 1
- 102000005369 Aldehyde Dehydrogenase Human genes 0.000 description 1
- 108020002663 Aldehyde Dehydrogenase Proteins 0.000 description 1
- 241000894006 Bacteria Species 0.000 description 1
- 239000005711 Benzoic acid Substances 0.000 description 1
- COMPKNJNNPWTIQ-UHFFFAOYSA-N C1=CC=NC=C1.OC(=O)C1=CC=CN=C1 Chemical compound C1=CC=NC=C1.OC(=O)C1=CC=CN=C1 COMPKNJNNPWTIQ-UHFFFAOYSA-N 0.000 description 1
- 229910021580 Cobalt(II) chloride Inorganic materials 0.000 description 1
- 229910021591 Copper(I) chloride Inorganic materials 0.000 description 1
- MYMOFIZGZYHOMD-UHFFFAOYSA-N Dioxygen Chemical compound O=O MYMOFIZGZYHOMD-UHFFFAOYSA-N 0.000 description 1
- 102000016680 Dioxygenases Human genes 0.000 description 1
- 108010028143 Dioxygenases Proteins 0.000 description 1
- 229940127463 Enzyme Inducers Drugs 0.000 description 1
- YNQLUTRBYVCPMQ-UHFFFAOYSA-N Ethylbenzene Chemical class CCC1=CC=CC=C1 YNQLUTRBYVCPMQ-UHFFFAOYSA-N 0.000 description 1
- 229910021380 Manganese Chloride Inorganic materials 0.000 description 1
- GLFNIEUTAYBVOC-UHFFFAOYSA-L Manganese chloride Chemical compound Cl[Mn]Cl GLFNIEUTAYBVOC-UHFFFAOYSA-L 0.000 description 1
- 241001465754 Metazoa Species 0.000 description 1
- BWAAFAYPPMBJCU-UHFFFAOYSA-N N1N=C(C=C1)C(=O)O.N1N=CC=C1 Chemical compound N1N=C(C=C1)C(=O)O.N1N=CC=C1 BWAAFAYPPMBJCU-UHFFFAOYSA-N 0.000 description 1
- 229910021586 Nickel(II) chloride Inorganic materials 0.000 description 1
- DOYADSIHPVIYRU-UHFFFAOYSA-N O1C=CC=C1.O1C(=CC=C1)C(=O)O Chemical compound O1C=CC=C1.O1C(=CC=C1)C(=O)O DOYADSIHPVIYRU-UHFFFAOYSA-N 0.000 description 1
- CZPWVGJYEJSRLH-UHFFFAOYSA-N Pyrimidine Chemical compound C1=CN=CN=C1 CZPWVGJYEJSRLH-UHFFFAOYSA-N 0.000 description 1
- YTPLMLYBLZKORZ-UHFFFAOYSA-N Thiophene Chemical compound C=1C=CSC=1 YTPLMLYBLZKORZ-UHFFFAOYSA-N 0.000 description 1
- 230000009471 action Effects 0.000 description 1
- 229910001854 alkali hydroxide Inorganic materials 0.000 description 1
- 150000008044 alkali metal hydroxides Chemical class 0.000 description 1
- 230000000507 anthelmentic effect Effects 0.000 description 1
- 239000000921 anthelmintic agent Substances 0.000 description 1
- 230000003266 anti-allergic effect Effects 0.000 description 1
- 150000001491 aromatic compounds Chemical class 0.000 description 1
- 230000008901 benefit Effects 0.000 description 1
- 235000010233 benzoic acid Nutrition 0.000 description 1
- 150000003938 benzyl alcohols Chemical class 0.000 description 1
- KCXMKQUNVWSEMD-UHFFFAOYSA-N benzyl chloride Chemical class ClCC1=CC=CC=C1 KCXMKQUNVWSEMD-UHFFFAOYSA-N 0.000 description 1
- 229960003475 cambendazole Drugs 0.000 description 1
- 238000004113 cell culture Methods 0.000 description 1
- 230000000052 comparative effect Effects 0.000 description 1
- OXBLHERUFWYNTN-UHFFFAOYSA-M copper(I) chloride Chemical compound [Cu]Cl OXBLHERUFWYNTN-UHFFFAOYSA-M 0.000 description 1
- 230000008878 coupling Effects 0.000 description 1
- 238000010168 coupling process Methods 0.000 description 1
- 238000005859 coupling reaction Methods 0.000 description 1
- 238000010586 diagram Methods 0.000 description 1
- 229910001882 dioxygen Inorganic materials 0.000 description 1
- 238000005516 engineering process Methods 0.000 description 1
- 238000001704 evaporation Methods 0.000 description 1
- 230000008020 evaporation Effects 0.000 description 1
- 238000000605 extraction Methods 0.000 description 1
- 229930195733 hydrocarbon Natural products 0.000 description 1
- 150000002430 hydrocarbons Chemical class 0.000 description 1
- 230000002401 inhibitory effect Effects 0.000 description 1
- 238000011835 investigation Methods 0.000 description 1
- 229910000359 iron(II) sulfate Inorganic materials 0.000 description 1
- 229910001629 magnesium chloride Inorganic materials 0.000 description 1
- 239000011565 manganese chloride Substances 0.000 description 1
- 235000002867 manganese chloride Nutrition 0.000 description 1
- 238000005259 measurement Methods 0.000 description 1
- 239000013028 medium composition Substances 0.000 description 1
- 230000000813 microbial effect Effects 0.000 description 1
- QMMRZOWCJAIUJA-UHFFFAOYSA-L nickel dichloride Chemical compound Cl[Ni]Cl QMMRZOWCJAIUJA-UHFFFAOYSA-L 0.000 description 1
- 235000005152 nicotinamide Nutrition 0.000 description 1
- 239000011570 nicotinamide Substances 0.000 description 1
- 235000016709 nutrition Nutrition 0.000 description 1
- 230000035764 nutrition Effects 0.000 description 1
- 239000003960 organic solvent Substances 0.000 description 1
- 150000002926 oxygen Chemical class 0.000 description 1
- 239000008177 pharmaceutical agent Substances 0.000 description 1
- 125000001997 phenyl group Chemical group [H]C1=C([H])C([H])=C(*)C([H])=C1[H] 0.000 description 1
- XAEFZNCEHLXOMS-UHFFFAOYSA-M potassium benzoate Chemical compound [K+].[O-]C(=O)C1=CC=CC=C1 XAEFZNCEHLXOMS-UHFFFAOYSA-M 0.000 description 1
- 125000002924 primary amino group Chemical class [H]N([H])* 0.000 description 1
- QZWHWHNCPFEXLL-UHFFFAOYSA-N propan-2-yl n-[2-(1,3-thiazol-4-yl)-3h-benzimidazol-5-yl]carbamate Chemical compound N1C2=CC(NC(=O)OC(C)C)=CC=C2N=C1C1=CSC=N1 QZWHWHNCPFEXLL-UHFFFAOYSA-N 0.000 description 1
- ODLMAHJVESYWTB-UHFFFAOYSA-N propylbenzene Chemical class CCCC1=CC=CC=C1 ODLMAHJVESYWTB-UHFFFAOYSA-N 0.000 description 1
- 108090000623 proteins and genes Proteins 0.000 description 1
- 229960005206 pyrazinamide Drugs 0.000 description 1
- OYSBZLVHMPNJMR-UHFFFAOYSA-N pyridine-3-carboxylic acid Chemical compound OC(=O)C1=CC=CN=C1.OC(=O)C1=CC=CN=C1 OYSBZLVHMPNJMR-UHFFFAOYSA-N 0.000 description 1
- YPOXGDJGKBXRFP-UHFFFAOYSA-N pyrimidine-4-carboxylic acid Chemical compound OC(=O)C1=CC=NC=N1 YPOXGDJGKBXRFP-UHFFFAOYSA-N 0.000 description 1
- 239000007858 starting material Substances 0.000 description 1
- 239000000126 substance Substances 0.000 description 1
- WJCNZQLZVWNLKY-UHFFFAOYSA-N thiabendazole Chemical compound S1C=NC(C=2NC3=CC=CC=C3N=2)=C1 WJCNZQLZVWNLKY-UHFFFAOYSA-N 0.000 description 1
- 239000004308 thiabendazole Substances 0.000 description 1
- 235000010296 thiabendazole Nutrition 0.000 description 1
- 229960004546 thiabendazole Drugs 0.000 description 1
- AZQRQOHDIBEVRL-UHFFFAOYSA-N thiophene;thiophene-2-carboxylic acid Chemical compound C=1C=CSC=1.OC(=O)C1=CC=CS1 AZQRQOHDIBEVRL-UHFFFAOYSA-N 0.000 description 1
- 239000000814 tuberculostatic agent Substances 0.000 description 1
- 235000013343 vitamin Nutrition 0.000 description 1
- 239000011782 vitamin Substances 0.000 description 1
- 229940088594 vitamin Drugs 0.000 description 1
- 229930003231 vitamin Natural products 0.000 description 1
- 150000003722 vitamin derivatives Chemical class 0.000 description 1
- NWONKYPBYAMBJT-UHFFFAOYSA-L zinc sulfate Chemical compound [Zn+2].[O-]S([O-])(=O)=O NWONKYPBYAMBJT-UHFFFAOYSA-L 0.000 description 1
- 229910000368 zinc sulfate Inorganic materials 0.000 description 1
- 239000011686 zinc sulphate Substances 0.000 description 1
- 235000009529 zinc sulphate Nutrition 0.000 description 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12P—FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
- C12P7/00—Preparation of oxygen-containing organic compounds
- C12P7/02—Preparation of oxygen-containing organic compounds containing a hydroxy group
- C12P7/04—Preparation of oxygen-containing organic compounds containing a hydroxy group acyclic
- C12P7/18—Preparation of oxygen-containing organic compounds containing a hydroxy group acyclic polyhydric
- C12P7/20—Glycerol
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12P—FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
- C12P7/00—Preparation of oxygen-containing organic compounds
- C12P7/40—Preparation of oxygen-containing organic compounds containing a carboxyl group including Peroxycarboxylic acids
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- C—CHEMISTRY; METALLURGY
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Abstract
A microbiological process is disclosed for the oxidation of methyl groups in aromatic 5- and 6-member ring heterocycles to form the corresponding carboxylic acids.
The heterocycle serves as the substrate and is unsubstituted on the carbon atoms adjacent to the methyl group to be oxidized. The reaction of the heterocycle takes place by means of microorganisms of the genus Pseudomonas utilizing toluene, xylene, or cymene. The enzymes of the microorganisms have been previously induced.
The heterocycle serves as the substrate and is unsubstituted on the carbon atoms adjacent to the methyl group to be oxidized. The reaction of the heterocycle takes place by means of microorganisms of the genus Pseudomonas utilizing toluene, xylene, or cymene. The enzymes of the microorganisms have been previously induced.
Description
cf ~ '~ ~' 'j r~ '~
~,4 a,; .,~ ~, .. , This invention relates to a new microbiological prc>cess for oxidation of methyl groups in aromatic 5- and 6-member ring heterocycles to form the corresponding carboxylic acids. The heterocycle (is unsubstituted) on the carbon atom adjacent to the methyl group to be oxidized.
The heterocycle serves as substrate for the reaction which is performed by microorganisms of the genus Pseudomonas utilizing toluene, xylem or cymene, whose enzymes have been previously induced.
These heterocyclic carboxylic acids are important intermediate products for the product of pharmaceutical agents. For example, nicotinic acid (3-pyridine carboxylic acid) is an important intermediate product for the production of nicotinic acid amide, which is a vitamin of the B group and has an essential importance for the nutrition of man and animals [Ullmann, Vol. 19, (1980), p. 603]. 2-Pyrazine carboxylic acid, e.g., is an important intermediate product for the production of the tuberculostatic agent pyrazinamide (2-pyrazine carboxylic acid amide), [Roemps Chemie Lexikon, Vol. 5, (1987)]. 4-Thiazole carboxylic acid serves for the production of thiabendazole, a highly effective antihelminthic (helminthicide), which in turn is a starting material for other newer antihelminthic agents, such as cambendazole [Ullmann, Vol. 23, (1980), p. 46].
~,4 a,; .,~ ~, .. , This invention relates to a new microbiological prc>cess for oxidation of methyl groups in aromatic 5- and 6-member ring heterocycles to form the corresponding carboxylic acids. The heterocycle (is unsubstituted) on the carbon atom adjacent to the methyl group to be oxidized.
The heterocycle serves as substrate for the reaction which is performed by microorganisms of the genus Pseudomonas utilizing toluene, xylem or cymene, whose enzymes have been previously induced.
These heterocyclic carboxylic acids are important intermediate products for the product of pharmaceutical agents. For example, nicotinic acid (3-pyridine carboxylic acid) is an important intermediate product for the production of nicotinic acid amide, which is a vitamin of the B group and has an essential importance for the nutrition of man and animals [Ullmann, Vol. 19, (1980), p. 603]. 2-Pyrazine carboxylic acid, e.g., is an important intermediate product for the production of the tuberculostatic agent pyrazinamide (2-pyrazine carboxylic acid amide), [Roemps Chemie Lexikon, Vol. 5, (1987)]. 4-Thiazole carboxylic acid serves for the production of thiabendazole, a highly effective antihelminthic (helminthicide), which in turn is a starting material for other newer antihelminthic agents, such as cambendazole [Ullmann, Vol. 23, (1980), p. 46].
2-Thiophene carboxylic acid exhibits an antiallergic effect [~, Vol. 23, (1980), p. 219].
Tn-depth investigation of the oxidation of methyl groups has so far been conducted with aromatic hydrocarbons.
The production of carboxylic acids by the microbial oxidation of methylated aromatic compounds was exhaustively described in the.works of Raymond et al.
[Raymond et al., Process Biochem., (1969), pp. 71 to 74].
U.S. Patent No. 3,393,289 describes a process for the biochemical oxidation of methyl groups in aromatic ~~~r~_ hydrocarbons with a gram-positive microorganism strain belonging to the genus Nocardia. Drawbacks of these processes include the fact that, for example, in the methyl group oxidation of aromatic hydrocarbons the benzene ring of the corresponding acid is cleaved off.
In regard to the use of Pseudomonas ut' ATCC
No. 33015, it is known that the biochemical oxidation of the methyl group of toluene to form benzoic acid takes place in three steps. By the action of toluene monoxygenase benzyl alcohol first results, which is then in two other steps, catalyzed by an alcohol dehydrogenase and aldehyde dehydrogenase, reacted to form the acid. In this strain, both the Xyl gene, which codes for enzymes of xylene degradation, and the genes which are responsible for the regulation of the Xyl gene, lie on the plasmid pWWO. This archetypal Tol plasmid has already been thoroughly studied in a molecular biological manner [Haravama et al., J. Bacteriol. 171, (1989), pp. 5048 to 5055: Burlage et al., Appl. Environ Microbiol. 55, (1989), pp. 1323 to 1328].
Likewise, microbiological processes for the oxidatzion of methyl groups of an N-heterocycle are also known from the literature. According to Soviet Union Patent No. 417,468, 2-methyl pyridine may be oxidized with a gram-positive microorganism strain of the genus Nocardia to form the corresponding acid.
Soviet Union Patent No. 228,688 describes a microbiological process for the production of nicotinic acid from 3-methyl pyridine using a gram-positive microorganism of the genus ~ivcobacterium. A
microbiological process for the production of nicotinic acid with gram-positive bacteria of the genus Nocardia is known from Soviet Union Patent No. 302,341.
The drawbacks of methyl group oxidation of N-heterocycles with gram-positive bacteria include the fact that, with such alkane-utilizing bacteria, the mixture ~~ ~ ,~ ~a .~. ~' ratio of the alkane to the substance to be oxidized has to be adjusted exactly to achieve a biotransformation and that no biotransformation of the substrate occurs in the absence of the alkane, i.e, the alkane used for the induction must always be present, also in the reaction of the substrate. By comparative tests with the gram-positive bacterium Nocardia and applicants' gram-negative Pseudomonas, it was clearly shown that using Nocardia even in the presence of an alkane, such as dodecane, 3-methyl pyridine could not be oxidized to nicotinic acid.
In addition, U.S. Patent No. 4,859,592 describes a process for the production of picolinic acid using Pseudomonas putida by an alkyl-substituted aromatic hydrocarbon being formed in the presence of molecular oxygen in a first step by a dioxygenase into a 2-hydroxy muconic acid semialdehyde, and then the latter being reacted in a second step with ammonia or a primary amine to form 2-picolinic acid. The drawback of such process is that the corresponding picolinic acid is formed only in the second step by the reaction of the 2-hydroxy muconic acid semialdehyde with ammonia .
An object of the present invention is to eliminate the above-described prior art drawbacks and to develop a simple, one step process for microbiological methyl group oxidation, from which the corresponding acids can be isolated in good yield and purity and the aromatic heterocycle is not cleaved off. A further object is to provide a process in which than compound used Eor tha induction, after completion of the induction of the enzyme, need no longer be present during the reaction of the substrate and, thus, the reaction does not depend on the amount of the enzyme inducer.
Accordingly, the invention provides a microbiological process for oxidation of methyl groups in aromatic 5- or 6-member ring heterocycles. The heterocycle should be unsubstituted on the carbon atom adjacent to the methyl group to be oxidized to the corresponding carboxylic acid. The methylated heterocycle is used as substrate for the reaction. The reaction is performed by microorganisms of the genus Pseudomonas, utilizing toluene, xylene or cymene, Whose enzymes have been previously induced.
In the accompanying drawings:
Figure 1 is a schematic diagram of the equipment used in a preferred embodiment of the invention: and_ Figure 2 is a graph which shows the results of the biotransformation in Figure 1.
The reaction of the process of the invention is suitably performed by microorganisms of the species Pseudomonas putida utilizing toluene, xylene or cymene.
Preferably the xylene-utilizing microorganism strain Pseudomonas putida ATCC No. 33015 or an effective mutant of the latter or the cymene-utilizing microorganism strain Pseudomonas putida DSM 5709 or an effective mutant of the latter is used. The reaction is performed especially with the microorganism strain Pseudomonas gutida ATCC No. 33015. The microorganism strain Pseudomonas putida (DSM 5709) has been deposited with the German Collection of Microorganisms (DSM) and Zellkulturen [Cell Cultures] GmbH, Mascheroderweg lb, 3300 Braunschweig, FRG, on December 22, 1989 under number DSM 5709.
The microorganism strain gse o~,~ Putida ATCc Na. 33015 has been deposited with the American Typs Culture Collection, 12301 Parklawn Drive, Rockville, Maryland 20852, USA, under ATCC No. 33015. .
The enzyme induction can suitably be performed both with compounds which serve the microorganism as carbon source and energy source, such as p-xylene, m-xylene, p-cymene, m-cymene and toluene, and with compounds which do not serve the microorganism as carbon cr 4~ cr ,'.a .~. , ~ ~ .v source and energy source, such as monosubstituted and dis~ubstituted methyl toluenes, ethyl toluenes and chlorotoluenes, benzyl alcohols and p-chlorobenzaldehyde, which have already been described as enzyme inducers for 5 the degradation of aromatic hydrocarbons [Abril, M.-A..
et al., J. Bacteriol., Vol. 171, (1989), pp. 6782 to 6?89].
Preferably the enzyme induction is performed with p-xylene, m-xylene, 2-chlorotoluene or 2-bromotoluene.
The compounds utilized for induction can either be present during the reaction of the substrate or the supply thereof can be stopped before the reaction of the substrate. The inducer concentration is usually selected so that it is lower than the minimal inhibitory concentration of the enzymes responsible for the reaction. Depending on the embodiment of the process, the addition of the compounds used for the induction is preferably stopped during the reaction of the substrate, either by stopping the feeding or by centrifuging off the cells.
The strains used in the invention usually grow with p-xylene, m-xylene, p-cymene, m-cymene or toluene as the sole carbon source and energy source in a mineral medium [Kulla et ~1., Arch.~Microbiol., 135, (1983), pp.
1 to 7] or in a complex medium ("Nutrient Broth Nr. 2", oxoid Ltd., G.B.) or iri a minimal medium, the composition of which is indicated in the following Table 3. The growth substrate was fed to the medium, in gaseous form according to the data of claus and Walker [J. Gen.
Microbiol., 36, (1964), pg. 107 to 122], and the gassing rate was 0.5 V/min.
Before the substrate addition, the cells are cultured to an optical density of 1 to 200 at 650 nm in the culture medium, preferably up to an optical density of 5 to 100 at 650 nm.
z~~~~~~v ~~~~
The reaction can suitably take place either with a single or continuous substrate addition so that the substrate concentration in the culture medium does not exceed 20 percent (w/v). Preferably the substrate addition takes place so that the substrate concentration in the culture medium does not exceed 5 percent (w/v).
Depending on the embodiment, the substrate addition can also take place at the same time as the enzyme inducer, for example, by a mixture of enzyme inducer and substrate being used.
The reaction is suitably performed in a pH range of 4 to 11, preferably from 6 to 10. Suitably the reaction is usually performed at a temperature of 15° to 0°C., preferably at a temperature of 25° to 40°C. The reaction is usually completed within a period of 1 to 24 hours.
As substrates for the reaction, methylated aromatic 5-member ring heterocycles which contain one or more heteroatoms from the series of oxygen, nitrogen and sulfur may advantageously be used, such as methylated thiophenes, methylated furans, methylated pyrroles, methy~,ated thiazoles, methylated pyrazoles or methylated imidazoles, which are unsubstituted on the carbon atom adjacent to the methyl group to be oxidized. Preferably methylated furans, methylated thiophenes, methylated pyrroles and methylated thiazoles are used. 3,5-Dimethylpyrazole, 5-methylthiazole, 4-methylthiazole, 2,5-dimethylthiophene, 2-methylthiophene, 3-methylthiophene, 2,5-dimethylfuran and 2,5-dimethylpyrrole are especially suitable for use as the 5-member ring heterocycle.
The reaction can also be performed with aromatic methylated 6-member ring heterocycles with one or more nitrogen atoms as heteroatom, such as methylated pyridines, methylated pyrimidines, methylated pyrazines or methylated pyridazines, which are unsubstitued on the carbon atoms adjacent to the methyl groups to be oxidized. Preferably methylated pyridines, methylated pyrazines arid methylated pyrimidines, are used such as 2-methylpyridine, 3-methylpyridine, 4-methylpyridine, 2,5-dimethylpyridine, 2,4-dimethylpyridine, 6-chloro-3-methylpyridine, 2-chloro-3-ethyl-6-methylpyridine, 4,6-dimethylpyrimidine, 2-methylpyrazine, 2,5-methylpyrazine, 2-6-dimethylpyrazine, 2,3,5-trimethylpyrazine and 2-chloro-3,6-dimethylpyrazine.
A preferred embodiment of the process is depicted in Fig. 1. According to this embodiment, the enzyme inducer and/or the methylated heterocycle can be fed as substrate into a bioreactor (2), and the amount of feed is regulated by the concentration of the enzyme inducer in exhaust air (3) or the bioreactor (2).
Preferably the concentration of the enzyme inducer in the exhaust air (3) is measured with a measuring device (4).
The measuring device for the enzyme inducer concentration may be, for example, a photometer for ultraviolet light, a gas chromatograph or a gas chromatograph coupled with a mass spectrometer. This measuring device (4) is suitably coupled with a control device (5), which regulates the amount of feed of the enzyme inducer and/or of the methylated heterocycle by a pump (1), by which the feed of the enzyme inducer and/or of the methylated heterocycle to the bioreactor 2 takes place. The feeding of the enzyme inducer and/or of the methylated heterocycle is suitably regulated by this coupling.
Preferably the concentration of the enzyme inducer in the exhaust air (3) is kept constant by this regulation. The regulation suitably takes place so that the concentration .of the enzyme inducer in the exhaust air (3) is between 0.001 and 10 mmol/1 of exhaust air, preferably between 0.01 and 3 mmol/1 of exhaust air. Preferably the enzyme inducer and/or the methylated heterocycle is fed as substrate in the form of a mixture into the bioreactor 2~~~~~
(2). The ratio of the enzyme inducer to substrate is suitably between 5:1 and 3:1. According to this embodiment, the enzyme inducer and/or the methylated heterocycle is suitably fed to the bioreactor (2) by means of the incoming air.
Fig. 2 shows the results of the biotransformation in the preferred embodiment.
After the reaction, the corresponding acids can be isolated in a known way, for example by extraction l0 with organic solvent or, if the alkali salt of the heterocyclic carboxylic acid is formed, by concentration by evaporation of the cell-free culture medium. The alkali salt of the heterocyclic carboxylic acid can be farmed, for example, by addition of an alkali hydroxide for adjustment of the pH of the culture medium.
Thus, according to the invention a simple, one-step microbiological process for the oxidation of methyl groups in aromatic 5- or 6-member ring heterocycles is afforded with which the corresponding acids are isolated in good yield and purity. Another advantage of this process consists in the fact that the aromatic heteracycle is not cleaved off and the reaction rate does not depend on the amount of the enzyme inducer.
The following Examples illustrate the invention.
Examgle 1 5-Methyl-2-p~~razine carboxylic acid Pseudomonas nuti~ ATCC No. 33015 was cultured in a complex medium (100 ml) "Nutrient Broth Nr. 2"
(Oxoid Ltd., England) in a fermenter at pH 7.0 and at a temperature of 30°C. The enzyme inducer p-xylene was fed in gaseous form according to the data of Claus and Walker [J. Gen. Microbiol., 36, (1964), pp. 107 to 122] up to a concentration of 1 mmol/liter. Then the cells were washed twice with mineral medium [Kulla et al., Arch.
Microbiol., 135, (1983), pp. 1 to 7] and an optical density of 10 at 650 nm in 100 ml of mineral medium was s y set. 1 mmol of 2,5-dimethylpyrazine, which corresponds to a substrate concentration of 0.108 percent (w/v) in 100 ml, was added to this cell suspension. After an incubation period of 4 hours at 30°C there was obtained, in the absence of the enzyme inducer, 0.9 mmol of 5-methyl-2-pyrazine carboxylic acid corresponding to a yield of 90 percent, based on the 2,5-dimethylpyrazine used.
Examgle 2 Analogous to the procedure of Example 1, various additional compounds were also used as enzyme inducer, and the results are~summarized in Table 1 with the corresponding concentration.
Table 1 Enzyme Concen- Substrat Percent Yield inducer tration amount fl of 5-methyl-moles mmol in 100 2-pyrazine in 100 ml of cells carboxylic ml of corr. 0.108 acid cells w v mmol x-xylene 0.1 2,5-dimethyl 90 pyrazine m-xyl~ne 0.1 2,5-dimethyl 90 pyrazine 2-chloro- 0.1 2,5-dimethyl 90 toluene pyrazine 2-bromo- 0.1 2,5-dimethyl 90 toluene pyrazine ~xamnle 3 ,~-Methyl-2-pyrazine carboxylic acid gseudomonas putida ATCC No. 33015 was cultured according to Example 1 but in mineral medium I~ulla et al., Arch. Microbiol., 135, (1983), pp. 1 to 7] with p-xylene as the sole carbon source and energy source. 1 mmol of 2,5-dimethylpyrazine, which corresponds to a concentration of 0.108 percent (w/v), was added .~ f, .~ r~ .s~
~Ai~ ~! !..<.)>:~
to the cell suspension (100 ml) with an optical density of 10. The p-xylene addition was stopped during the reaction of the substrate. Under these conditions, 1 mmol of 2,5-dimethylpyrazine was converted over a period of 4 5 hours to 0.9 mmol of 5-methyl-2-pyrazine carboxylic acid, corresponding to a yield of 90 percent, based on the 2,5-dimethylpyrazine used.
Example 4 Pseudomonas putida DSM 5709 was cultured 10 analogously to Example 3, but with p-cymene as sole carbon source and energy source. After a period of 16 hours, 0.5 mmol of .5-methyl-2-pyrazine carboxylic acid was obtained, corresponding to a yield of 50 percent, based on the 2,5-dimethylpyrazine used.
Examples 5 to 28 Examples 5 to 28 were performed following the procedure of Example 3 with an amount of 1 mmol of substrate per 100 ml of cell suspension and the results are summarized in Table 2.
Table 2 Fx. Substrate Concen- Reaction End Yield tration Time in Product in ' of sub- hours trate in w ~
in the culture medium 5 2-methyl 0.049 16 2-pyrazina 30 pyrazine carboxylic acid 6 2,5-dimethyl- 0.108 4 2-methyl- 90 pyrazine 5-pyrazine carboxylic acid 7 2,6-dimethyl- 1.108 4 2-methyl- 90 pyrazine 6-pyrazine carboxylic acid 8 2,3,5-trimethyl- 0.122 16 2,3-dimethyl- 50 pyrazine 5-pyrazine carboxylic acid 9 2-chloro-3,6- 0.142 16 2-chloro-3 90 dimethyl- methyl-6-pyrazine pyrazine carboxylic acid 2-methyl- 0.093 16 2-pyridine 90 pyridine carboxylic acid 11 3-methyl- 0.093 16 3-pyridine 50 pyridine carboxylic acid 12 4-methyl- 0.093 16 4-pyridine 30 pyridine carboxylic acid 13 2,6-dimethyl- 0.107 16 6-methyl- 80 pyridine 2-pyridine carboxylic acid 14 2,5-dimethyl- 0.107 16 5-methyl- 40 pyridine 2-pyridine carboxylic acid 2,4-dimethyl- 0.1.07 16 4-methyl- ~ 40 pyridine 2-pyridine carboxylic acid 16 3,5-dimethyl- 0.107 16 5-methyl- 40 pyridine 3-pyridine carboxylic acid ~~~~~.~i 17 6-chloro- 0.128 16 6-chloro- 90 2-methyl- 2-pyridine pyridine carboxylic acid 18 6-chloro 0.128 16 6-chloro- 90 3-methyl- 3-pyridine pyridine carboxylic acid 19 2-chloro- 0.157 16 2-chloro- 10 3-ethyl- 3-ethyl-6-methyl- 6-pyridine pyridine carboxylic acid 20 4,6-dimethyl- 0.108 16 6-methyl- 20 pyrimidine ~ 4-pyrimidine carboxylic acid 21 3,5-dimethyl- 0.096 16 5-methyl- 80 pyrazole 3-pyrazole carboxylic acid 22 5-methyl- 0.099 16 5-thiazole 80 thiazole carboxylic acid 23 4-methyl- 0.099 16 4-thiazole 80 thiazole carboxylic acid 24 2,5-dimethyl- 0.112 16 5-methyl- 90 thiophene 2-thiophene carboxylic acid 25 2-methyl- 0.098 16 2-thiophene 90 thiophene carboxylic acid 26 3-methyl- 0.098 16 3-thiophene 90 thiophene carboxylic acid 27 2,5-dimethyl- 0.096 16 5-methyl- 40 furan 2-furan carboxylic acid 2~'~,~~. ~' 28 2,5-dimethyl- 0.095 16 5-methyl- 40 pyrrole 2-pyrrole carboxylic acid Example 29 Production of 5-methyl-2-pvrazine carboxylic acid Pseudomonas putida ATCC No. 33015 was cultured in minimal medium, the composition of which is indicated in Table 3 below, in a 20-liter bioreactor (2) at a working volume of l5 liters. The temperature was 30°C: the pH was kept constant at 7.0 by the addition of potassium hydroxide. The gassing rate was 20 liters per minute. A mixture of 4 parts (v/v) of p-xylene and 1 part of 2,5-dimethylpyrazine served as the growth substrate.
Feeding of this mixture into the bioreactor (2) took place~by means of the pump (1). The addition of the growth substrate was coupled to a control (5) by a xylene measurement (4) in bioreactor exhaust air (3). Thus, by means of the control (5), the xylene concentration in the exhaust air (3) was kept constant at a value of 0.2 mmol/1. The biotransformation was stopped only when no mor~.growth could be detected. Fig. 2 shows the results of such a biotranaEormation. Curve A of Fig. 2 represents the optical density at 650 nm. Curve H of Fig. 2 represents the concentration in g/1 of 2,5-. dimethylpyrazine. Curve C of Fig. 2 represents the concentration in g/I of the potassium salt of 5-methyl-2-pyrazine carboxylic said. With this technology, 5-methyl-2-pyrazine carboxylic concentrations of 38 gjk were obtained.
Table 3 Medium composition:
Ingredients Amounts MgCl2 6H20 0.8 g/1 CaCl, 0.16 g/1 (NH4) S04 2 g/1 NH4C1 ~ 5 g/1 Na,,S04 0.25 g/1 KH,S04 0.4 g/1 NazHP04 0 . g/ 1 Trace elements 1 ml/1 FeEDTA 15 ml/1 Composition of the trace element solution:
Ingredients Amounts KOH ~ 15 g/ ], EDTANa22H20 10 g/1 ZnSO4 7H20 g g/1 MnCl2 4H20 4 g/1 H~B03 2 . g/ 1 CoCl2 6H~0 1. g/1 0 1. g/l CuCl Z
NiCl2 6H20 0.18 g/1 Na,Mo04 2H20 0 . g/ 1 Composition of FeEDTA:
I ncrred i ent s Amounts EDTANa2 ~ 2Hz0 5 g/1 FeS04 ~ 7H20 2 g/1 Comparison Examples (A) Pseudomonas putida ATCC 33015 The biotransformation of 3-methylpyridine with Pseudomonas putida ATCC No. 33015 was performed according to Example 3 with 1 mmol of 3-methylpyridine. After an incubation.period of 8 hours, 0.25 mmol of nicotinic acid was obtained,. corresponding to a yield of 25 percent, based on the 3-methylpyridine used.
(B) Rhodoccocus rhodochrous or Nocardia Rhodoccocus rhodochrous DSM 43002 (ATCC No.
19149) was cultured in a mineral medium according to Example 3, with 0.4 percent dodecane as the carbon source and the energy source and then washed in the same mineral medium, but without dodecane. The cell suspensions (100 ml) with an optical density at 650 nm of 10 were mixed in three separate flasks with the following compounds:
(a) 1 mmol of 3-methylpyridine, (b) 1 mmol of 3-methylpyridine and 0.055 mmol of dodecane, and (c) 1 mmol of 3-methylpyridine and 5.5 mmol of dodecane.
After 8 hours of incubation time at 30°C, nicotinic acid could not be detected in any of the batches.
Tn-depth investigation of the oxidation of methyl groups has so far been conducted with aromatic hydrocarbons.
The production of carboxylic acids by the microbial oxidation of methylated aromatic compounds was exhaustively described in the.works of Raymond et al.
[Raymond et al., Process Biochem., (1969), pp. 71 to 74].
U.S. Patent No. 3,393,289 describes a process for the biochemical oxidation of methyl groups in aromatic ~~~r~_ hydrocarbons with a gram-positive microorganism strain belonging to the genus Nocardia. Drawbacks of these processes include the fact that, for example, in the methyl group oxidation of aromatic hydrocarbons the benzene ring of the corresponding acid is cleaved off.
In regard to the use of Pseudomonas ut' ATCC
No. 33015, it is known that the biochemical oxidation of the methyl group of toluene to form benzoic acid takes place in three steps. By the action of toluene monoxygenase benzyl alcohol first results, which is then in two other steps, catalyzed by an alcohol dehydrogenase and aldehyde dehydrogenase, reacted to form the acid. In this strain, both the Xyl gene, which codes for enzymes of xylene degradation, and the genes which are responsible for the regulation of the Xyl gene, lie on the plasmid pWWO. This archetypal Tol plasmid has already been thoroughly studied in a molecular biological manner [Haravama et al., J. Bacteriol. 171, (1989), pp. 5048 to 5055: Burlage et al., Appl. Environ Microbiol. 55, (1989), pp. 1323 to 1328].
Likewise, microbiological processes for the oxidatzion of methyl groups of an N-heterocycle are also known from the literature. According to Soviet Union Patent No. 417,468, 2-methyl pyridine may be oxidized with a gram-positive microorganism strain of the genus Nocardia to form the corresponding acid.
Soviet Union Patent No. 228,688 describes a microbiological process for the production of nicotinic acid from 3-methyl pyridine using a gram-positive microorganism of the genus ~ivcobacterium. A
microbiological process for the production of nicotinic acid with gram-positive bacteria of the genus Nocardia is known from Soviet Union Patent No. 302,341.
The drawbacks of methyl group oxidation of N-heterocycles with gram-positive bacteria include the fact that, with such alkane-utilizing bacteria, the mixture ~~ ~ ,~ ~a .~. ~' ratio of the alkane to the substance to be oxidized has to be adjusted exactly to achieve a biotransformation and that no biotransformation of the substrate occurs in the absence of the alkane, i.e, the alkane used for the induction must always be present, also in the reaction of the substrate. By comparative tests with the gram-positive bacterium Nocardia and applicants' gram-negative Pseudomonas, it was clearly shown that using Nocardia even in the presence of an alkane, such as dodecane, 3-methyl pyridine could not be oxidized to nicotinic acid.
In addition, U.S. Patent No. 4,859,592 describes a process for the production of picolinic acid using Pseudomonas putida by an alkyl-substituted aromatic hydrocarbon being formed in the presence of molecular oxygen in a first step by a dioxygenase into a 2-hydroxy muconic acid semialdehyde, and then the latter being reacted in a second step with ammonia or a primary amine to form 2-picolinic acid. The drawback of such process is that the corresponding picolinic acid is formed only in the second step by the reaction of the 2-hydroxy muconic acid semialdehyde with ammonia .
An object of the present invention is to eliminate the above-described prior art drawbacks and to develop a simple, one step process for microbiological methyl group oxidation, from which the corresponding acids can be isolated in good yield and purity and the aromatic heterocycle is not cleaved off. A further object is to provide a process in which than compound used Eor tha induction, after completion of the induction of the enzyme, need no longer be present during the reaction of the substrate and, thus, the reaction does not depend on the amount of the enzyme inducer.
Accordingly, the invention provides a microbiological process for oxidation of methyl groups in aromatic 5- or 6-member ring heterocycles. The heterocycle should be unsubstituted on the carbon atom adjacent to the methyl group to be oxidized to the corresponding carboxylic acid. The methylated heterocycle is used as substrate for the reaction. The reaction is performed by microorganisms of the genus Pseudomonas, utilizing toluene, xylene or cymene, Whose enzymes have been previously induced.
In the accompanying drawings:
Figure 1 is a schematic diagram of the equipment used in a preferred embodiment of the invention: and_ Figure 2 is a graph which shows the results of the biotransformation in Figure 1.
The reaction of the process of the invention is suitably performed by microorganisms of the species Pseudomonas putida utilizing toluene, xylene or cymene.
Preferably the xylene-utilizing microorganism strain Pseudomonas putida ATCC No. 33015 or an effective mutant of the latter or the cymene-utilizing microorganism strain Pseudomonas putida DSM 5709 or an effective mutant of the latter is used. The reaction is performed especially with the microorganism strain Pseudomonas gutida ATCC No. 33015. The microorganism strain Pseudomonas putida (DSM 5709) has been deposited with the German Collection of Microorganisms (DSM) and Zellkulturen [Cell Cultures] GmbH, Mascheroderweg lb, 3300 Braunschweig, FRG, on December 22, 1989 under number DSM 5709.
The microorganism strain gse o~,~ Putida ATCc Na. 33015 has been deposited with the American Typs Culture Collection, 12301 Parklawn Drive, Rockville, Maryland 20852, USA, under ATCC No. 33015. .
The enzyme induction can suitably be performed both with compounds which serve the microorganism as carbon source and energy source, such as p-xylene, m-xylene, p-cymene, m-cymene and toluene, and with compounds which do not serve the microorganism as carbon cr 4~ cr ,'.a .~. , ~ ~ .v source and energy source, such as monosubstituted and dis~ubstituted methyl toluenes, ethyl toluenes and chlorotoluenes, benzyl alcohols and p-chlorobenzaldehyde, which have already been described as enzyme inducers for 5 the degradation of aromatic hydrocarbons [Abril, M.-A..
et al., J. Bacteriol., Vol. 171, (1989), pp. 6782 to 6?89].
Preferably the enzyme induction is performed with p-xylene, m-xylene, 2-chlorotoluene or 2-bromotoluene.
The compounds utilized for induction can either be present during the reaction of the substrate or the supply thereof can be stopped before the reaction of the substrate. The inducer concentration is usually selected so that it is lower than the minimal inhibitory concentration of the enzymes responsible for the reaction. Depending on the embodiment of the process, the addition of the compounds used for the induction is preferably stopped during the reaction of the substrate, either by stopping the feeding or by centrifuging off the cells.
The strains used in the invention usually grow with p-xylene, m-xylene, p-cymene, m-cymene or toluene as the sole carbon source and energy source in a mineral medium [Kulla et ~1., Arch.~Microbiol., 135, (1983), pp.
1 to 7] or in a complex medium ("Nutrient Broth Nr. 2", oxoid Ltd., G.B.) or iri a minimal medium, the composition of which is indicated in the following Table 3. The growth substrate was fed to the medium, in gaseous form according to the data of claus and Walker [J. Gen.
Microbiol., 36, (1964), pg. 107 to 122], and the gassing rate was 0.5 V/min.
Before the substrate addition, the cells are cultured to an optical density of 1 to 200 at 650 nm in the culture medium, preferably up to an optical density of 5 to 100 at 650 nm.
z~~~~~~v ~~~~
The reaction can suitably take place either with a single or continuous substrate addition so that the substrate concentration in the culture medium does not exceed 20 percent (w/v). Preferably the substrate addition takes place so that the substrate concentration in the culture medium does not exceed 5 percent (w/v).
Depending on the embodiment, the substrate addition can also take place at the same time as the enzyme inducer, for example, by a mixture of enzyme inducer and substrate being used.
The reaction is suitably performed in a pH range of 4 to 11, preferably from 6 to 10. Suitably the reaction is usually performed at a temperature of 15° to 0°C., preferably at a temperature of 25° to 40°C. The reaction is usually completed within a period of 1 to 24 hours.
As substrates for the reaction, methylated aromatic 5-member ring heterocycles which contain one or more heteroatoms from the series of oxygen, nitrogen and sulfur may advantageously be used, such as methylated thiophenes, methylated furans, methylated pyrroles, methy~,ated thiazoles, methylated pyrazoles or methylated imidazoles, which are unsubstituted on the carbon atom adjacent to the methyl group to be oxidized. Preferably methylated furans, methylated thiophenes, methylated pyrroles and methylated thiazoles are used. 3,5-Dimethylpyrazole, 5-methylthiazole, 4-methylthiazole, 2,5-dimethylthiophene, 2-methylthiophene, 3-methylthiophene, 2,5-dimethylfuran and 2,5-dimethylpyrrole are especially suitable for use as the 5-member ring heterocycle.
The reaction can also be performed with aromatic methylated 6-member ring heterocycles with one or more nitrogen atoms as heteroatom, such as methylated pyridines, methylated pyrimidines, methylated pyrazines or methylated pyridazines, which are unsubstitued on the carbon atoms adjacent to the methyl groups to be oxidized. Preferably methylated pyridines, methylated pyrazines arid methylated pyrimidines, are used such as 2-methylpyridine, 3-methylpyridine, 4-methylpyridine, 2,5-dimethylpyridine, 2,4-dimethylpyridine, 6-chloro-3-methylpyridine, 2-chloro-3-ethyl-6-methylpyridine, 4,6-dimethylpyrimidine, 2-methylpyrazine, 2,5-methylpyrazine, 2-6-dimethylpyrazine, 2,3,5-trimethylpyrazine and 2-chloro-3,6-dimethylpyrazine.
A preferred embodiment of the process is depicted in Fig. 1. According to this embodiment, the enzyme inducer and/or the methylated heterocycle can be fed as substrate into a bioreactor (2), and the amount of feed is regulated by the concentration of the enzyme inducer in exhaust air (3) or the bioreactor (2).
Preferably the concentration of the enzyme inducer in the exhaust air (3) is measured with a measuring device (4).
The measuring device for the enzyme inducer concentration may be, for example, a photometer for ultraviolet light, a gas chromatograph or a gas chromatograph coupled with a mass spectrometer. This measuring device (4) is suitably coupled with a control device (5), which regulates the amount of feed of the enzyme inducer and/or of the methylated heterocycle by a pump (1), by which the feed of the enzyme inducer and/or of the methylated heterocycle to the bioreactor 2 takes place. The feeding of the enzyme inducer and/or of the methylated heterocycle is suitably regulated by this coupling.
Preferably the concentration of the enzyme inducer in the exhaust air (3) is kept constant by this regulation. The regulation suitably takes place so that the concentration .of the enzyme inducer in the exhaust air (3) is between 0.001 and 10 mmol/1 of exhaust air, preferably between 0.01 and 3 mmol/1 of exhaust air. Preferably the enzyme inducer and/or the methylated heterocycle is fed as substrate in the form of a mixture into the bioreactor 2~~~~~
(2). The ratio of the enzyme inducer to substrate is suitably between 5:1 and 3:1. According to this embodiment, the enzyme inducer and/or the methylated heterocycle is suitably fed to the bioreactor (2) by means of the incoming air.
Fig. 2 shows the results of the biotransformation in the preferred embodiment.
After the reaction, the corresponding acids can be isolated in a known way, for example by extraction l0 with organic solvent or, if the alkali salt of the heterocyclic carboxylic acid is formed, by concentration by evaporation of the cell-free culture medium. The alkali salt of the heterocyclic carboxylic acid can be farmed, for example, by addition of an alkali hydroxide for adjustment of the pH of the culture medium.
Thus, according to the invention a simple, one-step microbiological process for the oxidation of methyl groups in aromatic 5- or 6-member ring heterocycles is afforded with which the corresponding acids are isolated in good yield and purity. Another advantage of this process consists in the fact that the aromatic heteracycle is not cleaved off and the reaction rate does not depend on the amount of the enzyme inducer.
The following Examples illustrate the invention.
Examgle 1 5-Methyl-2-p~~razine carboxylic acid Pseudomonas nuti~ ATCC No. 33015 was cultured in a complex medium (100 ml) "Nutrient Broth Nr. 2"
(Oxoid Ltd., England) in a fermenter at pH 7.0 and at a temperature of 30°C. The enzyme inducer p-xylene was fed in gaseous form according to the data of Claus and Walker [J. Gen. Microbiol., 36, (1964), pp. 107 to 122] up to a concentration of 1 mmol/liter. Then the cells were washed twice with mineral medium [Kulla et al., Arch.
Microbiol., 135, (1983), pp. 1 to 7] and an optical density of 10 at 650 nm in 100 ml of mineral medium was s y set. 1 mmol of 2,5-dimethylpyrazine, which corresponds to a substrate concentration of 0.108 percent (w/v) in 100 ml, was added to this cell suspension. After an incubation period of 4 hours at 30°C there was obtained, in the absence of the enzyme inducer, 0.9 mmol of 5-methyl-2-pyrazine carboxylic acid corresponding to a yield of 90 percent, based on the 2,5-dimethylpyrazine used.
Examgle 2 Analogous to the procedure of Example 1, various additional compounds were also used as enzyme inducer, and the results are~summarized in Table 1 with the corresponding concentration.
Table 1 Enzyme Concen- Substrat Percent Yield inducer tration amount fl of 5-methyl-moles mmol in 100 2-pyrazine in 100 ml of cells carboxylic ml of corr. 0.108 acid cells w v mmol x-xylene 0.1 2,5-dimethyl 90 pyrazine m-xyl~ne 0.1 2,5-dimethyl 90 pyrazine 2-chloro- 0.1 2,5-dimethyl 90 toluene pyrazine 2-bromo- 0.1 2,5-dimethyl 90 toluene pyrazine ~xamnle 3 ,~-Methyl-2-pyrazine carboxylic acid gseudomonas putida ATCC No. 33015 was cultured according to Example 1 but in mineral medium I~ulla et al., Arch. Microbiol., 135, (1983), pp. 1 to 7] with p-xylene as the sole carbon source and energy source. 1 mmol of 2,5-dimethylpyrazine, which corresponds to a concentration of 0.108 percent (w/v), was added .~ f, .~ r~ .s~
~Ai~ ~! !..<.)>:~
to the cell suspension (100 ml) with an optical density of 10. The p-xylene addition was stopped during the reaction of the substrate. Under these conditions, 1 mmol of 2,5-dimethylpyrazine was converted over a period of 4 5 hours to 0.9 mmol of 5-methyl-2-pyrazine carboxylic acid, corresponding to a yield of 90 percent, based on the 2,5-dimethylpyrazine used.
Example 4 Pseudomonas putida DSM 5709 was cultured 10 analogously to Example 3, but with p-cymene as sole carbon source and energy source. After a period of 16 hours, 0.5 mmol of .5-methyl-2-pyrazine carboxylic acid was obtained, corresponding to a yield of 50 percent, based on the 2,5-dimethylpyrazine used.
Examples 5 to 28 Examples 5 to 28 were performed following the procedure of Example 3 with an amount of 1 mmol of substrate per 100 ml of cell suspension and the results are summarized in Table 2.
Table 2 Fx. Substrate Concen- Reaction End Yield tration Time in Product in ' of sub- hours trate in w ~
in the culture medium 5 2-methyl 0.049 16 2-pyrazina 30 pyrazine carboxylic acid 6 2,5-dimethyl- 0.108 4 2-methyl- 90 pyrazine 5-pyrazine carboxylic acid 7 2,6-dimethyl- 1.108 4 2-methyl- 90 pyrazine 6-pyrazine carboxylic acid 8 2,3,5-trimethyl- 0.122 16 2,3-dimethyl- 50 pyrazine 5-pyrazine carboxylic acid 9 2-chloro-3,6- 0.142 16 2-chloro-3 90 dimethyl- methyl-6-pyrazine pyrazine carboxylic acid 2-methyl- 0.093 16 2-pyridine 90 pyridine carboxylic acid 11 3-methyl- 0.093 16 3-pyridine 50 pyridine carboxylic acid 12 4-methyl- 0.093 16 4-pyridine 30 pyridine carboxylic acid 13 2,6-dimethyl- 0.107 16 6-methyl- 80 pyridine 2-pyridine carboxylic acid 14 2,5-dimethyl- 0.107 16 5-methyl- 40 pyridine 2-pyridine carboxylic acid 2,4-dimethyl- 0.1.07 16 4-methyl- ~ 40 pyridine 2-pyridine carboxylic acid 16 3,5-dimethyl- 0.107 16 5-methyl- 40 pyridine 3-pyridine carboxylic acid ~~~~~.~i 17 6-chloro- 0.128 16 6-chloro- 90 2-methyl- 2-pyridine pyridine carboxylic acid 18 6-chloro 0.128 16 6-chloro- 90 3-methyl- 3-pyridine pyridine carboxylic acid 19 2-chloro- 0.157 16 2-chloro- 10 3-ethyl- 3-ethyl-6-methyl- 6-pyridine pyridine carboxylic acid 20 4,6-dimethyl- 0.108 16 6-methyl- 20 pyrimidine ~ 4-pyrimidine carboxylic acid 21 3,5-dimethyl- 0.096 16 5-methyl- 80 pyrazole 3-pyrazole carboxylic acid 22 5-methyl- 0.099 16 5-thiazole 80 thiazole carboxylic acid 23 4-methyl- 0.099 16 4-thiazole 80 thiazole carboxylic acid 24 2,5-dimethyl- 0.112 16 5-methyl- 90 thiophene 2-thiophene carboxylic acid 25 2-methyl- 0.098 16 2-thiophene 90 thiophene carboxylic acid 26 3-methyl- 0.098 16 3-thiophene 90 thiophene carboxylic acid 27 2,5-dimethyl- 0.096 16 5-methyl- 40 furan 2-furan carboxylic acid 2~'~,~~. ~' 28 2,5-dimethyl- 0.095 16 5-methyl- 40 pyrrole 2-pyrrole carboxylic acid Example 29 Production of 5-methyl-2-pvrazine carboxylic acid Pseudomonas putida ATCC No. 33015 was cultured in minimal medium, the composition of which is indicated in Table 3 below, in a 20-liter bioreactor (2) at a working volume of l5 liters. The temperature was 30°C: the pH was kept constant at 7.0 by the addition of potassium hydroxide. The gassing rate was 20 liters per minute. A mixture of 4 parts (v/v) of p-xylene and 1 part of 2,5-dimethylpyrazine served as the growth substrate.
Feeding of this mixture into the bioreactor (2) took place~by means of the pump (1). The addition of the growth substrate was coupled to a control (5) by a xylene measurement (4) in bioreactor exhaust air (3). Thus, by means of the control (5), the xylene concentration in the exhaust air (3) was kept constant at a value of 0.2 mmol/1. The biotransformation was stopped only when no mor~.growth could be detected. Fig. 2 shows the results of such a biotranaEormation. Curve A of Fig. 2 represents the optical density at 650 nm. Curve H of Fig. 2 represents the concentration in g/1 of 2,5-. dimethylpyrazine. Curve C of Fig. 2 represents the concentration in g/I of the potassium salt of 5-methyl-2-pyrazine carboxylic said. With this technology, 5-methyl-2-pyrazine carboxylic concentrations of 38 gjk were obtained.
Table 3 Medium composition:
Ingredients Amounts MgCl2 6H20 0.8 g/1 CaCl, 0.16 g/1 (NH4) S04 2 g/1 NH4C1 ~ 5 g/1 Na,,S04 0.25 g/1 KH,S04 0.4 g/1 NazHP04 0 . g/ 1 Trace elements 1 ml/1 FeEDTA 15 ml/1 Composition of the trace element solution:
Ingredients Amounts KOH ~ 15 g/ ], EDTANa22H20 10 g/1 ZnSO4 7H20 g g/1 MnCl2 4H20 4 g/1 H~B03 2 . g/ 1 CoCl2 6H~0 1. g/1 0 1. g/l CuCl Z
NiCl2 6H20 0.18 g/1 Na,Mo04 2H20 0 . g/ 1 Composition of FeEDTA:
I ncrred i ent s Amounts EDTANa2 ~ 2Hz0 5 g/1 FeS04 ~ 7H20 2 g/1 Comparison Examples (A) Pseudomonas putida ATCC 33015 The biotransformation of 3-methylpyridine with Pseudomonas putida ATCC No. 33015 was performed according to Example 3 with 1 mmol of 3-methylpyridine. After an incubation.period of 8 hours, 0.25 mmol of nicotinic acid was obtained,. corresponding to a yield of 25 percent, based on the 3-methylpyridine used.
(B) Rhodoccocus rhodochrous or Nocardia Rhodoccocus rhodochrous DSM 43002 (ATCC No.
19149) was cultured in a mineral medium according to Example 3, with 0.4 percent dodecane as the carbon source and the energy source and then washed in the same mineral medium, but without dodecane. The cell suspensions (100 ml) with an optical density at 650 nm of 10 were mixed in three separate flasks with the following compounds:
(a) 1 mmol of 3-methylpyridine, (b) 1 mmol of 3-methylpyridine and 0.055 mmol of dodecane, and (c) 1 mmol of 3-methylpyridine and 5.5 mmol of dodecane.
After 8 hours of incubation time at 30°C, nicotinic acid could not be detected in any of the batches.
Claims (15)
1. A microbiological process for the oxidation of a methyl group in an aromatic 5- or 6-member ring heterocycle to form the corresponding carboxylic acid, which heterocycle is unsubstituted on the carbon atom adjacent to the methyl group to be oxidized, wherein the methylated heterocycle is used as the substrate for the reaction and the reaction is performed by microorganisms of the genus Pseudomonas utilizing toluene, xylene or cymene, enzymes of the microorganisms having been previously induced.
2. A process as claimed in claim 1, wherein the enzyme induction is performed either with a compound which serves the microorganism as the carbon source and the energy source, or with a compound which does not serve the microorganism as the carbon source and the energy source.
3. A process as claimed in claim 2, wherein the reaction is performed by microorganisms of the species Pseudomonas putida utilizing toluene, xylene or cymene.
4. A process as claimed in claim 1 or 3, wherein the reaction is performed with the xylene-utilizing microorganism strain Pseudomonas putida ATCC No. 33015 or an effective mutant of said strain.
5. A process as claimed in claim 1 or 3, wherein the reaction is performed with the cymene-utilizing microorganism strain Pseudomonas putida DSM 5709 or an effective mutant of said strain.
6. A process as claimed in claim 1, 2 or 3, wherein the reaction takes place either with a single or continuous substrate addition so that the substrate concentration in the culture medium does not exceed 20 percent (w/v).
7. A process as claimed in claim 1, 2 or 3, wherein the reaction is performed at a pH of 4 to 11.
8. A process as claimed in claim 1, 2 or 3, wherein the reaction is performed at a temperature of 15° to 50°C.
9. A process as claimed in claim 1, 2 or 3, wherein the reaction is performed with a methylated aromatic 5-member ring heterocycle, as the substrate, which contains one or more heteroatoms selected from the group consisting of oxygen, nitrogen and sulfur.
10. A process as claimed in claim 1, 2 or 3, wherein the reaction is performed with a methylated thiophene, methylated furan, methylated pyrrole, methylated thiazole, methylated pyrazole or methylated imidazole as the substrate.
11. A process as claimed in claim 1, 2 or 3, wherein the reaction is performed with a methylated aromatic 6-member ring heterocycle, as the substrate, which contains one or more nitrogen atoms as the heteroatom.
12. A process as claimed in claim 1, 2 or 3, wherein the reaction is performed with a methylated pyridine, methylated pyrimidine, methylated pyrazine or methylated pyridazine as the substrate.
13. A process as claimed in claim 1, wherein the enzyme inducer and/or the methylated heterocycle is fed as the substrate into bioreactor, and the amount of the feed is regulated by the concentration of the enzyme inducer in the exhaust air of the bioreactor.
14. A process as claimed in claim 13, wherein the concentration of the enzyme inducer is measured in the exhaust air with a measuring device and the amount of feed of the enzyme inducer and/or of the methylated heterocycle is regulated by a control, which is coupled to the measuring device.
15. A process according to claim 13 or 14, wherein the regulation takes place so that the concentration of the enzyme inducer in the exhaust air is kept constant and is between 0.001 and 10 mmol/1 of exhaust air.
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US5236832A (en) * | 1990-02-13 | 1993-08-17 | Lonza, Ltd. | Microbiological oxidation of methyl groups in heterocycles |
US5213973A (en) * | 1990-06-06 | 1993-05-25 | Lonza Ltd. | Microbiological process for oxidation of methyl groups |
CZ279488B6 (en) * | 1990-09-25 | 1995-05-17 | Lonza A.G. | Micro-organisms rhodococcus erythropolis and arthrobacter sp. as well as micro-biological preparation of hydroxylated pyrazines and quinoxalines. |
US5173412A (en) * | 1990-11-08 | 1992-12-22 | Lonza, Ltd. | Microbiological process for the production of hydroxylated pyrazine derivatives |
KR100233330B1 (en) * | 1991-02-04 | 1999-12-01 | 하인즈 모제르 | Microbiological Methods for Preparing 6-hydroxypicolinic Acid |
US5238830A (en) * | 1991-02-04 | 1993-08-24 | Lonza Ltd. | Microbiological process for the production of 6-hydroxypicolinic acid |
US5268294A (en) * | 1991-02-04 | 1993-12-07 | Lonza Ltd. | Alcaligenes faecalis strains useful for the microbiological process for the production of 6-hydroxypicolinic acid |
US5266469A (en) * | 1991-03-18 | 1993-11-30 | Lonza Ltd. | Microbiological process for the production of 6-hydroxynicotinic acid |
US5264362A (en) * | 1991-03-18 | 1993-11-23 | Lonza Ltd. | Microbiological process for the production of 6-hydroxynicotinic acid |
CZ279305B6 (en) * | 1992-01-24 | 1995-04-12 | Lonza A.G. | 2-halogenpyrimidine-4-carboxylic acids, process of their preparation and their use for the preparation of derivatives of 2-substituted pyrimidine-4-carboxylic acids and derivatives of substituted pyrimidine--carboxylic acids |
DK0707656T3 (en) * | 1993-07-05 | 1999-02-08 | Basf Ag | Process for biotechnological preparation of alcohols, aldehydes and carboxylic acids |
SE518099C2 (en) | 1997-11-21 | 2002-08-27 | Claes Johansson Automotive Ab | Adjustable pedal rack for a vehicle |
US6361979B1 (en) | 1999-02-12 | 2002-03-26 | Pfizer Inc. | Microbial conversion of 2-methylquinoxaline |
DE19951768A1 (en) * | 1999-10-27 | 2001-05-03 | Basf Ag | Microbiological process for the production of aromatic aldehydes and / or carboxylic acids |
US6746856B2 (en) | 2000-08-09 | 2004-06-08 | Pfizer Inc. | Microbial conversion of bicyclic heteroaromatic compounds |
US7054430B2 (en) * | 2001-08-23 | 2006-05-30 | Paymentone Corporation | Method and apparatus to validate a subscriber line |
RU2292391C2 (en) * | 2004-12-23 | 2007-01-27 | Научно-исследовательский центр токсикологии и гигиенической регламентации биопрепаратов (НИЦ ТБП) | BACTERIUM Pseudomonas putida STRAIN USEFUL IN PURIFICATION OF SOILS, GROUND WATER AND SURFACE WATER FROM TRINITROTOLUENE |
RU2292392C2 (en) * | 2004-12-23 | 2007-01-27 | Научно-исследовательский центр токсикологии и гигиенической регламентации биопрепаратов (НИЦ ТБП) | BACTERIUM Pseudomonas alcaligence STRAIN USEFUL IN PURIFICATION OF SOILS, GROUND WATER AND SURFACE WATER FROM TRINITROTOLUENE |
HUE029126T2 (en) | 2009-05-04 | 2017-02-28 | Prometic Pharma Smt Ltd | Substituted aromatic compounds and pharmaceutical uses thereof |
EP2428505B1 (en) | 2010-09-13 | 2016-08-10 | Jubilant Life Sciences Limited | Process for producing pyridine carboxylic acids |
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US4859592A (en) * | 1985-07-26 | 1989-08-22 | Hagedorn Scott R | Production of picolinic acid and pyridine products via pseudomonas |
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